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Articles 271 - 300 of 870
Full-Text Articles in Food Science
Contents, Discovery Editors
Contents, Discovery Editors
Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences
No abstract provided.
Instructions For Authors, Discovery Editors
Instructions For Authors, Discovery Editors
Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences
No abstract provided.
Milk Phospholipids Extraction Using Switchable Solvents, Kaavya Rathnakumar
Milk Phospholipids Extraction Using Switchable Solvents, Kaavya Rathnakumar
Electronic Theses and Dissertations
Phospholipids (PLs) found in milk are of great interest due to their health and nutritional benefits associated with their consumption. By-products generated during the manufacture of dairy products represent a source of PLs with potential for value-added opportunities. Currently, the extraction of PLs from by-products results in overall lowefficiencies, and it involves subsequent solvent separation and lipid recovery. This dissertation studied the extraction of milk PLs from by-product streams with a tertiary anime (N, N-dimethyl cyclohexylamine, CyNMe2) as a switchable hydrophilicity solvent. This type of solvents can be reversibly switched between a hydrophobic and hydrophilic form in the presence or …
Letter From The Dean, Deacue Fields
Letter From The Dean, Deacue Fields
Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences
No abstract provided.
Discovery: The Student Journal Of Dale Bumpers College Of Agricultural, Food And Life Sciences - Volume 22 2021, Several Authors
Discovery: The Student Journal Of Dale Bumpers College Of Agricultural, Food And Life Sciences - Volume 22 2021, Several Authors
Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences
No abstract provided.
Featured Faculty Mentor And Student Explore The Dynamics Of This Research Relationship, Alejandro Rojas, Evan Buckner
Featured Faculty Mentor And Student Explore The Dynamics Of This Research Relationship, Alejandro Rojas, Evan Buckner
Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences
No abstract provided.
Letter From The Faculty Editor, Beth Kegley
Letter From The Faculty Editor, Beth Kegley
Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences
No abstract provided.
Developing Whey Protein Encapsulated Probiotics And Evaluating Environmental Listeria Using Whole-Genome Sequencing, Shayanti Minj
Developing Whey Protein Encapsulated Probiotics And Evaluating Environmental Listeria Using Whole-Genome Sequencing, Shayanti Minj
Electronic Theses and Dissertations
In this study, a novel value-added dairy-based health formulation was developed using whey protein hydrolysate and probiotic organisms. In the first part of the study, different forms of whey proteins, concentrate WPC80, isolate WPI90, and hydrolysates WPH10, WPH15 and WPH20 were screened for bioactivities (antimicrobial, antioxidant, and antihypertensive activity). Hydrolysate WPH10, exhibiting the highest bioactivities was conjugated with maltodextrin. A batch of 2L conjugated solution was spray dried in a Niro drier with an inlet and outlet temperature of 200⁰C and 90⁰C, and alternatively, freeze dried at −80 °C under 50 mTorr vacuum. The bioactivities of the conjugated samples were …
Arabinoxylan Structural Profiling Of Cool-Season Pasture Grasses Via High-Performance Anion-Exchange Chromatography With Pulsed Amperometric Detection (Hpaec-Pad) Analysis Of Endoxylanase Digests, Glenna Erin Joyce
Theses and Dissertations--Animal and Food Sciences
Arabinoxylan (AX) is a major structural polysaccharide found in the cell walls of monocots such as cereal grains and pasture grasses. The variety of AX structural components and substitution patterns contribute to AX structural diversity between different monocot species as well as plant tissues.
The rumen is the first digestion site of masticated food material in cattle and provides 70% of energy to host through fermentation of forage. There are many species of pasture grasses that act as a forage source. Differences in AX structure found in these pasture grasses may impact rumen microbial fermentation. Understanding the AX structure of …
Single-Dose Oral Challenges To Validate Eliciting Doses In Children With Cow’S Milk Allergy, Paul J. Turner, Yvonne M. D'Art, Bettina Duca, Sophia A. Chastell, Guadalupe Marco-Martin, Rosialzira N. Vera-Berrios, Olaya Alvarez, Raphaëlle Bazire, Pablo Rodríguez Del Río, Marta Vazquez-Ortiz, Joseph L. Baumert, Ronald Van Ree, Clare E.N. Mills, Montserrat Fernandez-Rivas, Jonathan O.B. Hourihane
Single-Dose Oral Challenges To Validate Eliciting Doses In Children With Cow’S Milk Allergy, Paul J. Turner, Yvonne M. D'Art, Bettina Duca, Sophia A. Chastell, Guadalupe Marco-Martin, Rosialzira N. Vera-Berrios, Olaya Alvarez, Raphaëlle Bazire, Pablo Rodríguez Del Río, Marta Vazquez-Ortiz, Joseph L. Baumert, Ronald Van Ree, Clare E.N. Mills, Montserrat Fernandez-Rivas, Jonathan O.B. Hourihane
Department of Food Science and Technology: Faculty Publications
Background: There is increasing interest in the use of eliciting doses (EDs) to inform allergen risk management. The ED can be estimated from the distribution of threshold doses for allergic subjects undergoing food challenges within a specified population. Estimated ED05 values for cow's milk (the dose expected to cause objective allergic symptoms in 5% of the milk-allergic population) range from 0.5 mg to 13.9 mg cow's milk protein. We undertook a single-dose challenge study to validate a predicted ED05 for cow's milk of 0.5 mg protein.
Methods: Participants were recruited from 4 clinical centres. Predetermined criteria were used …
The Use Of Inorganic And Organic Acids As Short Duration Antimicrobial Dips On Mitigating Pathogens Present On Commercial Chicken During Peri-Harvest, Dana Kristen Dittoe
The Use Of Inorganic And Organic Acids As Short Duration Antimicrobial Dips On Mitigating Pathogens Present On Commercial Chicken During Peri-Harvest, Dana Kristen Dittoe
Graduate Theses and Dissertations
With poultry being the most consumed meat in the United States, poultry processors must provide consumers with safe, wholesome products. As a consequence, poultry processors are faced with the challenge of reducing the presence of foodborne pathogens such as Salmonella spp. and Campylobacter jejuni among raw poultry products. Though multi-hurdle approaches using antimicrobials are placed throughout processing to reduce these pathogens, Salmonella and C. jejuni still persist among raw poultry. Thus, it was the objective of the current dissertation to investigate various antimicrobials, organic and inorganic acids, as short duration dips and sprays as means to reduce common pathogens (Salmonella, …
Fate And Dissemination Of Salmonella Reading In Market-Age Turkeys At Processing Using Oral Gavage Challenge Model, Aaron Ashcraft
Fate And Dissemination Of Salmonella Reading In Market-Age Turkeys At Processing Using Oral Gavage Challenge Model, Aaron Ashcraft
Graduate Theses and Dissertations
This study aimed to evaluate the fate and dissemination of Salmonella Reading (SR) in market-age turkeys using an oral gavage challenge model. One hundred twenty-eight-week-old commercial turkey hens were moved from commercial production to research facilities. Upon arrival, a combination of enrofloxacin, 10 mg/kg, and florfenicol, 20 mg/kg, were orally administered sequentially before comingled placement on fresh pine shavings. Turkeys were challenged with 108 cfu SR by oral gavage on days 4 and 7 post-placement. Subsets were subjected to simulated commercial processing on days 14 (n=40), 21 (n=40) and 28 (n=32) post-placement (corresponding to 10, 11, and 12 weeks of …
Regression-Derived Ileal Endogenous Amino Acid Losses In Broiler Chickens And Cannulated Pigs Fed Corn Fiber, Wheat Bran, And Pectin, Sunday A. Adedokun, Olayiwola Adeola
Regression-Derived Ileal Endogenous Amino Acid Losses In Broiler Chickens And Cannulated Pigs Fed Corn Fiber, Wheat Bran, And Pectin, Sunday A. Adedokun, Olayiwola Adeola
Animal and Food Sciences Faculty Publications
The objective of these studies was to determine the effect corn fiber (CF), wheat bran (WB) and pectin (PEC) on basal ileal endogenous amino acid (EAA) losses in broiler chickens (Exp. 1) and cannulated pigs (Exp. 2) using the regression method. Semi-purified diets containing 100 g/kg of CF, WB, or PEC (broiler chickens) and CF or PEC (pigs) were fed to replicate cages consisting of eight birds per cage of 21-d-old broiler chickens and six replicates of pigs consisting of one pig per pen. Ileal endogenous His, Glu, and Pro losses were higher (p < 0.05) for CF and WB compared with birds fed diets containing PEC. Contrasts between CF and WB showed higher (p < 0.05) ileal endogenous nitrogen, total amino acid, His, Ile, Met, Glu, Pro, and Tyr losses in birds fed the CF diets (Exp. 1). Contrasts of EAA losses between birds fed the WB and PEC diets showed higher (p < 0.05) losses for His, Glu, and Pro. In the cannulated pigs, CF resulted in higher (p < 0.05) ileal endogenous His, Leu, and Tyr losses. In summary, CF induced higher ileal EAA losses in broiler chickens and cannulated pigs.
Bovine Liver Supplement Labeling Practices And Compliance With U.S. Regulations, Anthony J. Silva, Olive J. Dahm, Rosalee S. Hellberg
Bovine Liver Supplement Labeling Practices And Compliance With U.S. Regulations, Anthony J. Silva, Olive J. Dahm, Rosalee S. Hellberg
Food Science Faculty Articles and Research
Bovine liver supplements are sought after by consumers due to their nutrient-dense profile and high protein content. However, there is a lack of information regarding bovine liver supplement labeling practices. The objective of this study was to assess labeling practices and compliance with U.S. regulatory standards among commercially sold bovine liver supplements. The product labels for 49 bovine liver supplements were examined for required information, including a statement of identity; net quantity of contents; “Supplement Facts” label; ingredient statement; and name and place of business of manufacturer, packer, or distributor with domestic address or telephone number. Any claims made on …
Detection Of Organic Free Radicals And Reactive Oxygen Substances Using Chemically-Stimulated Luminescence From Structured Compound Semiconductors, William L. Boatright
Detection Of Organic Free Radicals And Reactive Oxygen Substances Using Chemically-Stimulated Luminescence From Structured Compound Semiconductors, William L. Boatright
Animal and Food Sciences Faculty Patents
A method of monitoring for the presence of an oxidizing chemical species in an aqueous or non-polar environment includes steps of exposing a structured compound semiconductor material to the oxidizing chemical species in the environment and detecting electromagnetic radiation emitted by the structured compound semiconductor material upon exposure to the oxidizing chemical species. The structured compound semiconductor material is a phytate scaffold material and a metal dopant.
Detection Of Hydroperoxides Using Chemically-Stimulated Luminescence From Structured Compound Semiconductors, William L. Boatright
Detection Of Hydroperoxides Using Chemically-Stimulated Luminescence From Structured Compound Semiconductors, William L. Boatright
Animal and Food Sciences Faculty Patents
A method of monitoring for the presence of a hydroperoxide in an aqueous or non-polar environment includes steps of exposing a structured compound semiconductor material with peroxidase activity to the hydroperoxide in the environment and detecting electromagnetic radiation emitted by the structured compound semiconductor material with peroxidase activity upon exposure to the hydroperoxide. The luminescence emitting semiconductor material with peroxidase activity consists of a primary semiconductor material with a dopant prepared on a phytate scaffold.
Synthetic Alkaloid Treatment Influences The Intestinal Epithelium And Mesenteric Adipose Transcriptome In Holstein Steers, Kyle J. Mclean, Ransom L. Baldwin Vi, Congjun Li, James L. Klotz, J. Lannett Edwards, Kyle R. Mcleod
Synthetic Alkaloid Treatment Influences The Intestinal Epithelium And Mesenteric Adipose Transcriptome In Holstein Steers, Kyle J. Mclean, Ransom L. Baldwin Vi, Congjun Li, James L. Klotz, J. Lannett Edwards, Kyle R. Mcleod
Animal and Food Sciences Faculty Publications
Holstein steers (n = 16) were used to determine if a synthetic alkaloid, bromocriptine, would alter the transcriptome of the small intestine and adjacent mesenteric adipose. On d 0, steers were assigned to one of two treatments: control (CON; saline only) or bromocriptine (BROMO; 0.1 mg/kg BW bromocriptine mesylate injected intramuscularly every 3 d for 30 d). Steers were slaughtered and midpoint sections of jejunal epithelium and associated mesenteric fat were collected for RNA isolation. Transcriptome analysis was completed via RNA-Seq to determine if BROMO differed compared with CON within intestinal epithelium or mesenteric adipose mRNA isolates. Differential expression …
Effects Of Supplementation Of Microalgae (Aurantiochytrium Sp.) To Laying Hen Diets On Fatty Acid Content, Health Lipid Indices, Oxidative Stability, And Quality Attributes Of Meat, Bing Liu, Jiang Jiang, Dongyou Yu, Gang Lin, Youling L. Xiong
Effects Of Supplementation Of Microalgae (Aurantiochytrium Sp.) To Laying Hen Diets On Fatty Acid Content, Health Lipid Indices, Oxidative Stability, And Quality Attributes Of Meat, Bing Liu, Jiang Jiang, Dongyou Yu, Gang Lin, Youling L. Xiong
Animal and Food Sciences Faculty Publications
The present study is conducted to investigate the effects of dietary docosahexaenoic acid (DHA)-rich microalgae (MA, Aurantiochytrium sp.) on health lipid indices, stability, and quality properties of meat from laying hens. A total of 450 healthy 50-wk-old Hy-Line Brown layers were randomly allotted to 5 groups (6 replicates of 15 birds each), which received diets supplemented with 0, 0.5, 1.0, 1.5, and 2.0% MA for 15 weeks. Fatty acid contents and quality properties of breast and thigh muscles from two randomly selected birds per replicate (n = 12) were measured. The oxidative stability of fresh, refrigerated, frozen, and cooked …
Sodium Butyrate Reduces Salmonella Enteritidis Infection Of Chicken Enterocytes And Expression Of Inflammatory Host Genes In Vitro, Anamika Gupta, Mohit Bansal, Basanta Raj Wagle, Xiaolun Sun, Narayan Rath, Annie Donoghue, Abhinav Upadhyay
Sodium Butyrate Reduces Salmonella Enteritidis Infection Of Chicken Enterocytes And Expression Of Inflammatory Host Genes In Vitro, Anamika Gupta, Mohit Bansal, Basanta Raj Wagle, Xiaolun Sun, Narayan Rath, Annie Donoghue, Abhinav Upadhyay
Poultry Science Faculty Publications and Presentations
Salmonella Enteritidis (SE) is a facultative intracellular pathogen that colonizes the chicken gut leading to contamination of carcasses during processing. A reduction in intestinal colonization by SE could result in reduced carcass contamination thereby reducing the risk of illnesses in humans. Short chain fatty acids such as butyrate are microbial metabolites produced in the gut that exert various beneficial effects. However, its effect on SE colonization is not well known. The present study investigated the effect of sub-inhibitory concentrations (SICs) of sodium butyrate on the adhesion and invasion of SE in primary chicken enterocytes and chicken macrophages. In addition, the …
Response Of Broiler Chickens In The Starter And Finisher Phases To 3 Sources Of Microbial Phytase, O. O. Babatunde, J. A. Jendza, P. Ader, P. Xue, Sunday A. Adedokun, O. Adeola
Response Of Broiler Chickens In The Starter And Finisher Phases To 3 Sources Of Microbial Phytase, O. O. Babatunde, J. A. Jendza, P. Ader, P. Xue, Sunday A. Adedokun, O. Adeola
Animal and Food Sciences Faculty Publications
A broiler chicken study was conducted for 42 D to evaluate their responses to 3 commercially available microbial phytases. Growth performance, nutrient digestibility, and bone mineralization at days 21 and 42 posthatching were used as parameters of evaluation. The study was a randomized complete block design with 12 treatments, 8 replicate pens, and 25 birds per pen. Treatments included a positive control (PC), a negative control (NC) with crude protein (CP), nonphytate phosphorus (P), and calcium (Ca) reduced by 18, 1.5, and 1.8 g/kg, respectively; the NC + 4 levels of phytase A (250, 500, 750, 1,000 FTU/kg), 3 levels …
Life Cycle Assessment Of The Us Beef Processing Through Integrated Hybrid Approach, Shaobin Li, Yuwei Qin, Jeyamkondan Subbiah, Bruce Dvorak
Life Cycle Assessment Of The Us Beef Processing Through Integrated Hybrid Approach, Shaobin Li, Yuwei Qin, Jeyamkondan Subbiah, Bruce Dvorak
Department of Civil and Environmental Engineering: Faculty Publications
Hybrid life cycle assessment (LCA) incorporating process-based and economic input-output (EIO)–based inventory data has been applied in various industries (e.g., wind energy, biofuel). Few hybrid LCA studies have been found in the food industry. This work analyzes the life cycle environmental impacts of the US beef processing industry using process-based and integrated hybrid LCA. The process-based inventory includes all resource inputs and waste outputs associated with a beef processing plant. The EIO-based inventory includes key activities missing in the process-based inventory, such as technical and management service, wood and paper, and industrial equipment. Ten environmental impact categories from TRACI v2.1 …
Growing South Dakota (Summer 2020), College Of Agriculture, Food And Environmental Sciences
Growing South Dakota (Summer 2020), College Of Agriculture, Food And Environmental Sciences
Growing South Dakota (Publication of the College of Agriculture, Food and Environmental Sciences)
[Page] 3 COVID-19: From Our Students' Perspective
[Page] 11 Class of 2020 Q&A
[Page] 19 Alumni Advice for the Future Generation
[Page] 21 Recent Alumni Features
[Page] 25 Student Features
[Page] 31 CAFES News, Student Success, Awards and Achievements
[Page] 57 Jackrabbits Now and Then: A Current Student and Alumni Q&A
Respiratory Chain Activity And Protein Expression In Skeletal Muscles From High And Low Feed Efficient Swine Within The Same Genetic Line, Earsie L. Alcorn De Feliz
Respiratory Chain Activity And Protein Expression In Skeletal Muscles From High And Low Feed Efficient Swine Within The Same Genetic Line, Earsie L. Alcorn De Feliz
Graduate Theses and Dissertations
Current as well as past studies have provided evidence for a connection between macroeconomic/agricultural and cellular/biochemical basis of feed efficiency (FE; gain:feed) in farm animal production. Our investigation of respiratory chain activity, mitochondrial protein oxidation and protein expression was an expansion to the subcellular/molecular level. In this study we investigated the entire complex (Cx) of the electron transport chain (ETC) for differences in Cx activities in mitochondria isolated from skeletal muscle in high (HFE) and low (LFE) feed efficient swine within the same genetic line. Review of literature provided information for the connection between feed efficiency, mitochondrial function, and muscle …
Growing South Dakota (Spring/Summer 2020), College Of Agriculture, Food And Environmental Sciences
Growing South Dakota (Spring/Summer 2020), College Of Agriculture, Food And Environmental Sciences
Growing South Dakota (Publication of the College of Agriculture, Food and Environmental Sciences)
This issue contains the South Dakota Agricultural Experiment Station 2019 Annual Report.
[Page] 2 South Dakota Agricultural Experiment Station Update
[Page] 4 Featured Research
[Page] 14 Graduate and Undergraduate Research: In Our Own Words
[Page] 20 Featured Research
[Page] 32 Research in Progress
[Page] 38 CAFES News and Updates
[Page] 56 Jackrabbits Now and Then: A Current Student and Alumni Q&A
Exopolysaccharide From Mycelium Of Ganoderma Lucidum As A Potential Additive For Juvenile Red Hybrid Tilapia (Oreochromis Sp.), Pajaru Rahman Janathu Ferdaus
Exopolysaccharide From Mycelium Of Ganoderma Lucidum As A Potential Additive For Juvenile Red Hybrid Tilapia (Oreochromis Sp.), Pajaru Rahman Janathu Ferdaus
Student Works (2020-2029)
Functional feed additives are added during feed preparation to improve the growth performance and cellular defense for the fishes. Interaction of cellular biomolecules and dysfunction of red hybrid tilapia (Oreochromis sp.) could be avoided by strengthening the antioxidant defense with antioxidant rich sources. As for this, a bioactive polysaccharide of Ganoderma lucidum was found to have its antioxidant bioactivities. Thus the potential of exopolysaccharide (EPS) extracted from the mycelium of G.lucidum as feed additive for red hybrid tilapia was evaluated in this research. In this experiment, one hundred twenty (120) juveniles were randomly divided into four groups and designated with …
Fermented Mycelial Biomass Of Ganoderma Lucidum As A Potential Additive For Juvenile Red Hybrid Tilapia (Oreochromis Sp.), Subramaniam Kumeera
Fermented Mycelial Biomass Of Ganoderma Lucidum As A Potential Additive For Juvenile Red Hybrid Tilapia (Oreochromis Sp.), Subramaniam Kumeera
Student Works (2020-2029)
The presence of antibiotic compounds in aquaculture is gaining higher interest worldwide due to the emergence as dangerous pollutants of the environment and to human health. However, feed additive play an important role in agriculture to reduce the usage of antibiotics and aquaculture productive performance. Therefore, the polysaccharide produced by Ganoderma lucidum is recognised due to its essential biological activities. Growing biomass from mycelium of Ganoderma lucidum (MGL) through submerged liquid fermentation (SLF) has been a fast and straightforward alternative compared to fruiting bodies. The study aims to observe the inclusion of biomass from MGL as a dietary supplement on …
Authentication Of Red Snapper (Lutjanus Campechanus) Fillets Using A Combination Of Real-Time Pcr And Dna Barcoding, Rachel B. Isaacs, Rosalee S. Hellberg
Authentication Of Red Snapper (Lutjanus Campechanus) Fillets Using A Combination Of Real-Time Pcr And Dna Barcoding, Rachel B. Isaacs, Rosalee S. Hellberg
Food Science Faculty Articles and Research
Red snapper (Lutjanus campechanus) is a historically overfished and highly valued species that is commonly substituted with other fish, such as tilapia, rockfish, and other snapper species. The objective of this study was to assess the ability of real-time PCR to be used as a screening tool to rapidly test commercial fillets for the presence of red snapper, followed by species identification of negative samples with DNA barcoding. A total of 24 frozen, fresh, or thawed (previously frozen) fillets labeled as “red snapper” were tested with real-time PCR, along with 54 fillets from fish that are common substitutes …
Amino Acid Requirements In Horses, Chan Hee Mok, Kristine L. Urschel
Amino Acid Requirements In Horses, Chan Hee Mok, Kristine L. Urschel
Animal and Food Sciences Faculty Publications
Evaluating amino acid requirements, specifically threonine requirements, in horses will enable better feed formulation and result in economic production, improved animal health, and reduced environmental pollution. However, the current knowledge of protein and amino acid requirements in horses is still limited. Because horses have a unique digestive system and consume a variety of feed ingredients, their protein digestibility may be affected than other species by different feed composition, and thus amino acid requirements are susceptible to vary between situations. Therefore, a careful evaluation of amino acid require ments with a proper method is needed for various conditions. This review will …
Investigating The Potential Of Sodium Butyrate To Control Salmonella Enteritidis In Poultry, Anamika Gupta
Investigating The Potential Of Sodium Butyrate To Control Salmonella Enteritidis In Poultry, Anamika Gupta
Graduate Theses and Dissertations
Salmonella Enteritidis (SE) is a major poultry associated food borne pathogen that causes enteric illnesses in humans. Despite using various pre-harvest and post-harvest intervention strategies to reduce Salmonellosis, SE infection is still an extensive problem in the poultry industry with increased incidences since SE has developed multiple strategies to adapt in the chicken intestinal tract particularly in the ceca. Therefore, reducing SE in the intestine of chickens would reduce contamination of poultry derived foods and minimize the risk of human infection. Short chain fatty acids such as butyrate are microbial metabolites known to modulate inflammatory response. In this dissertation, the …
Microbiota Characterization Of Poultry Processing Systems And Associated Microbiological Sampling Materials Collected At Commercial Processing Facilities, Jennifer A. Wages
Microbiota Characterization Of Poultry Processing Systems And Associated Microbiological Sampling Materials Collected At Commercial Processing Facilities, Jennifer A. Wages
Graduate Theses and Dissertations
The poultry industry and associated regulatory bodies use whole bird carcass (WBC) rinsates to evaluate different stages of broiler processing systems for the prevalence of food-borne pathogens, including Salmonella spp. and Campylobacter spp. Within industry and research groups, the same sample collections are enumerated to determine E. coli, Enterobacteriaceae (EB), and Aerobic Plate Count (APC) microorganisms. Analysis of these indicator microorganisms provides numerical data that can be used to demonstrate the effects of specific process control steps where low occurrences of target pathogens hinder the exclusive use of prevalence data. With the utilization of next generation sequencing (NGS), including analysis …