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2018

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Articles 151 - 180 of 812

Full-Text Articles in Entomology

The Effects Of Habitat And Connectivity On Tropical Ant Ecology And Behavior., Benjamin Jacob Adams May 2018

The Effects Of Habitat And Connectivity On Tropical Ant Ecology And Behavior., Benjamin Jacob Adams

Electronic Theses and Dissertations

This dissertation explores the role that physical connections among and within habitats play in determining the local diversity and behaviors of cursorial organisms. Understanding the processes that regulate local community assembly and that contribute to the maintenance of species diversity is a cornerstone of community ecology. Ants are a useful model for studies of local communities because they are abundant and fulfill a variety of ecological roles. Chapter one of the dissertation examines the how lianas (woody vines) function as connective structures among tree crowns and how these connections affect arboreal ant community structure within a tropical forest canopy. Trees …


Effects Of Acorns On Populations Of Aedes Mosquitoes, Rachel Rogers May 2018

Effects Of Acorns On Populations Of Aedes Mosquitoes, Rachel Rogers

Honors Theses

Aedes albopictus (Asian tiger mosquito) and Aedes aegypti (yellow fever mosquito) are two mosquito species that are non-native to North America and are of medical importance. Both species can be found in aquatic container habitats, such as discarded tires and tree holes. In container habitats, the influx of detritus from the outside environment is essential to mosquito production and can include a variety of plant and animal material. Seeds from oak trees (acorns) can seasonally contribute to the detritus of these container habitats. This study examined the effect of acorns from the southern live oak (Quercus virginiana) on the performance …


Evidence For Organelle-Like Extracellular Vesicles From A Parasite Of Drosophila And Their Function In Suppressing Host Immunity, Mary Heavner May 2018

Evidence For Organelle-Like Extracellular Vesicles From A Parasite Of Drosophila And Their Function In Suppressing Host Immunity, Mary Heavner

Dissertations, Theses, and Capstone Projects

Parasitic wasps act as keystone species in natural ecosystems. Adept at suppressing immunity of their insect hosts, these natural enemies of insect pests are used for biocontrol in many parts of the world. Female parasitic wasps of the closely-related species Leptopilina heterotoma (Lh), a generalist of many Drosophilia flies, and Leptopilina boulardi (Lb), a specialist on flies of the melanogaster subgroup, produce venom and virus-like particles (VLPs) in their long gland-reservoir complexes, a secretory organ connected to ovipositors. Venom and VLPs are deposited, along with wasp eggs, into the body of the wasp’s larval fly host …


Ant Predation Of Blow Flies During Decomposition And Its Potential Impact On Pmi Estimations, Vincent J. Nappi May 2018

Ant Predation Of Blow Flies During Decomposition And Its Potential Impact On Pmi Estimations, Vincent J. Nappi

Student Theses

When an organism dies, the process of decomposition begins and many insects are attracted to the decomposing remains, or carrion, as a prospective food source for themselves, or their offspring. Blow flies (Family: Calliphoridae), in particular, are one of the first insects to discover and colonize a dead body due to the ability to detect a decomposing resource from large distances. As a result, forensic entomologists take advantage of the behavior and developmental cycles of early colonizers to calculate the post-mortem interval (PMI) in order to determine the time since death. However, along with the insects that are attracted to …


Concepts In Animal Parasitology: Permission To Publish Agreement, University Of Nebraska-Lincoln Libraries May 2018

Concepts In Animal Parasitology: Permission To Publish Agreement, University Of Nebraska-Lincoln Libraries

Concepts in Animal Parasitology

Blank Permission to Publish agreement form for authors of the Concepts in Animal Parasitology textbook/open educational resource.


Species And Cultural Management Of Earthworms On Golf Course Turf In Arkansas And Oklahoma, Paige Elizabeth Boyle May 2018

Species And Cultural Management Of Earthworms On Golf Course Turf In Arkansas And Oklahoma, Paige Elizabeth Boyle

Graduate Theses and Dissertations

As earthworms feed, they can egest soil and nutrient-rich aggregates (casts) on the soil surface. In low-cut turfgrass systems, such as golf course greens, tees, and fairways, surface casting can result in a muddy playing surface, ball roll issues, weed and pest invasion, reduced aesthetics, surface softening, and reduced photosynthesis. Because the use of pesticides for earthworm control is illegal in the U.S., earthworm casting must be managed through cultural practices. Sand topdressing is one method of earthworm control studied for use on golf courses, with the supposition being that the abrasive sand particles will deter the soft-bodied earthworms from …


Seasonal Phenology, Distribution And Treatments For Polyphagotarsonemus Latus (Banks) On Primocane-Fruiting Blackberries (Rubus L. Subgenus Rubus) In Arkansas, Jessica Anne Lefors May 2018

Seasonal Phenology, Distribution And Treatments For Polyphagotarsonemus Latus (Banks) On Primocane-Fruiting Blackberries (Rubus L. Subgenus Rubus) In Arkansas, Jessica Anne Lefors

Graduate Theses and Dissertations

Worldwide, blackberries (Rubus L. subgenus Rubus) are an economically important crop. In 2007, Polyphagotarsonemus latus (Banks) (broad mites), were first reported damaging primocane-fruiting blackberries in Fayetteville, Arkansas. Since this time, broad mite damage to blackberries and yield loss has been reported in many states and countries. Despite the increasing reports of this blackberry pest, little is known about their population dynamics, and few treatments are available. Growers with broad mite populations need a pest management program to minimize yield loss. Therefore, there was a need to develop sampling techniques, describe broad mite seasonal phenology in blackberry fields, and determine efficacy …


Screening Of Multimeric Β-Xylosidases From The Gut Microbiome Of A Higher Termite, Globitermes Brachycerastes, Chunyan Liu, Gen Zou, Xing Yan, Xuguo Zhou Apr 2018

Screening Of Multimeric Β-Xylosidases From The Gut Microbiome Of A Higher Termite, Globitermes Brachycerastes, Chunyan Liu, Gen Zou, Xing Yan, Xuguo Zhou

Entomology Faculty Publications

Termite gut microbiome is a rich reservoir for glycoside hydrolases, a suite of enzymes critical for the degradation of lignocellulosic biomass. To search for hemicellulases, we screened 12,000 clones from a fosmid gut library of a higher termite, Globitermes brachycerastes. As a common Southeastern Asian genus, Globitermes distributes predominantly in tropical rain forests and relies on the lignocellulases from themselves and bacterial symbionts to digest wood. In total, 22 positive clones with β-xylosidase activity were isolated, in which 11 representing different restriction fragment length polymorphism (RFLP) patterns were pooled and subjected to 454 pyrosequencing. As a result, eight putative β-xylosidases …


Sticky Small Target: An Effective Sampling Tool For Tsetse Fly Glossina Fuscipes Fuscipes Newstead, 1910, Njelembo J. Mbewe, Rajinder K. Saini, Baldwyn Torto, Janet Irungu, Abdullahi A. Yusuf, Christian W.W. Pirk Apr 2018

Sticky Small Target: An Effective Sampling Tool For Tsetse Fly Glossina Fuscipes Fuscipes Newstead, 1910, Njelembo J. Mbewe, Rajinder K. Saini, Baldwyn Torto, Janet Irungu, Abdullahi A. Yusuf, Christian W.W. Pirk

All Peer-Reviewed Publications

BACKGROUND: Small targets comprising panels of blue and insecticide-treated black netting material each 0.25 × 0.25 m have been shown to attract and kill Glossina fuscipes fuscipes Newstead, 1910 (Diptera: Glossinidae) thereby reducing its population density by over 90% in field trials. However, their attractive ability has not been fully exploited for sampling purposes. Therefore, in this study we assessed the effectiveness of using sticky small targets as sampling tools for G. f. fuscipes in western Kenya. We also determined the influence of colour on the landing response of female and male flies on sticky small targets.


The Ecology Of Nest Cavity Use By Arboreal Ants In The Brazilian Cerrado: Resource Availability, Nest Modification, And Trophic Interactions, Galen Priest Apr 2018

The Ecology Of Nest Cavity Use By Arboreal Ants In The Brazilian Cerrado: Resource Availability, Nest Modification, And Trophic Interactions, Galen Priest

Dissertations

Arboreal ants in the Brazilian Cerrado rely on cavities in living trees as nest sites. These cavities are created by a community of, wood-boring beetles, which act as ecosystem engineers. Despite the importance of these cavities as a resource, little is known about their natural abundance and heterogeneity, how ants use and modify them as nest sites, and how this interaction between cavities and their ant occupants influences trophic interactions on cerrado trees. Here I use natural history observations and manipulative experiments to address these questions. In the first chapter I quantified the occurrence, heterogeneity, and use of beetle-created cavities …


Testing Viability Of Oligonucleotide Primers On Microsatellite Markers Amplified By Polymerase Chain Reaction On Dermacentor Variabilis Samples From The Bulloch County Region Of Georgia, Usa, Danielle Souza Apr 2018

Testing Viability Of Oligonucleotide Primers On Microsatellite Markers Amplified By Polymerase Chain Reaction On Dermacentor Variabilis Samples From The Bulloch County Region Of Georgia, Usa, Danielle Souza

Honors College Theses

Dermacentor variabilis, more commonly known as the wood tick, or the American dog tick, can be found all over North America. D. variabilis is a common tick in Bulloch county, Georgia, USA, and little is known about the population structure of this population of the species. Microsatellite markers are able to locate sections of the genome and can aid in estimating relatedness among individuals in a population. Six different oligonucleotide primer pairs were published for D. variabilis, however, published and non-published works indicated that not all of those primer pairs were working equally well for PCR. This study is …


The Activity Of Saccharolytic Enzymes In Collembola Is Associated With Species Affinity For Caves, Andrea Parimuchová, Vladimír Šustr, Miloslav Devetter, Ondřej Vošta, Ionuţ Popa, Ľubomír Kováč Apr 2018

The Activity Of Saccharolytic Enzymes In Collembola Is Associated With Species Affinity For Caves, Andrea Parimuchová, Vladimír Šustr, Miloslav Devetter, Ondřej Vošta, Ionuţ Popa, Ľubomír Kováč

International Journal of Speleology

The activity of enzymes associated with digestion can reflect food availability and feeding preferences of invertebrates in a particular habitat. Caves are mostly nutrient-poor habitats lacking primary production. In the present study the enzymatic activity of cellulases, trehalases and chitinases was measured in eight collembolan species differently associated with the cave environment: the troglobionts (obligate cave species) Pseudacherontides spelaeus and Protaphorura janosik; the eutroglophiles Ceratophysella denticulata, Folsomia candida and Heteromurus nitidus; the subtroglophiles Hypogastrura aequepilosa and Orthonychiurus rectopapillatus; and the trogloxene (not associated with caves) Megaphorura arctica. Qualitative enzymatic patterns and quantitative differences in species activity were …


Pengaruh Minyak Cengkeh Dan Jenis Kemasan Terhadap Mutu Benih Dua Kultivar Kacang Hijau (Vigna Radiata (L.) R. Wilczek) Setelah Periode Simpan, Sumadi, Anne Nuraini, Erni Suminar, Siti Sarah Rubaekah, Muhamad Alvianto Apr 2018

Pengaruh Minyak Cengkeh Dan Jenis Kemasan Terhadap Mutu Benih Dua Kultivar Kacang Hijau (Vigna Radiata (L.) R. Wilczek) Setelah Periode Simpan, Sumadi, Anne Nuraini, Erni Suminar, Siti Sarah Rubaekah, Muhamad Alvianto

Jurnal Kultivasi

Seed storage is one of the efforts to maintain seed quality until the seed is ready to be planted. Some factors that influence seed quality after the storage period are seed storage pest attack, packaging type and seed charac-teristics of each cultivar. The objectives of the experiment was to determine the combination of dosage of clove oil, packaging type and mung bean cultivar. This research consisted of two series of experiments: to study the effectiveness of a combination of clove oil dosage with cultivars and tested combinations of packaging types with two mung bean cultivars. The first experiment was conducted …


Concepts In Animal Parasitology: Information For Authors [Slides], Sue Ann Gardner, Scott Lyell Gardner Apr 2018

Concepts In Animal Parasitology: Information For Authors [Slides], Sue Ann Gardner, Scott Lyell Gardner

Concepts in Animal Parasitology

Broadcast via Zoom live online, the following are the slides from an information session held for authors and reviewers of the Concepts in Animal Parasitology textbook. The work will be written collaboratively and published in 2024 as an open educational resource under a CC BY-NC-SA 4.0 International license.


Preferensi Petani Terhadap Keragaan Padi (Oryza Sativa) Unggul Untuk Lahan Sawah Di Wilayah Pangandaran Dan Cilacap, Muhammad Khais Prayoga, Neni Rostini, Mieke Rochimi Setiawati, Tualar Simarmata, Silke Stoeber, Kustiwa Adinata Apr 2018

Preferensi Petani Terhadap Keragaan Padi (Oryza Sativa) Unggul Untuk Lahan Sawah Di Wilayah Pangandaran Dan Cilacap, Muhammad Khais Prayoga, Neni Rostini, Mieke Rochimi Setiawati, Tualar Simarmata, Silke Stoeber, Kustiwa Adinata

Jurnal Kultivasi

The object that conducted in this study is farmer's preferences of rice plant charac-teristics. This study was taken in 3 villages which are village Ciganjeng, village Pamotan, and village Rawaapu. The method used in this study was quantitative design with descriptive analysis. The respondents were 64 rice plant farmers. Measuring instrument used was questionnaire and interview. The result of this study showed that farmers has its own preference for the character of rice plants. Conclution of this study is farmers preferred rice plants which has an average height of plants, wide leaves, leave's surface, leave's angle, and rice straw's type; …


Microfabricated Surfaces For The Physical Capture Of Insects, Catherine Loudon, Robert Corn, Megan Szyndler, Kenneth F. Haynes, Michael F. Potter Apr 2018

Microfabricated Surfaces For The Physical Capture Of Insects, Catherine Loudon, Robert Corn, Megan Szyndler, Kenneth F. Haynes, Michael F. Potter

Entomology Faculty Patents

Novel devices and methods of capturing, controlling and preventing infestation of insects using microfabricated surfaces are provided. In particular, a mechanism of insect capture inspired by the microstructures of the leaf surfaces of plants and the key features of those surfaces with respect to the capture and control of pests have been determined and engineered into a variety of microfabricated surfaces capable of reproducing the effectiveness of these physical capture methods.


Foraging Distance Of The Argentine Ant In California Vineyards., Brian N. Hogg, Erik H. Nelson, James R. Hagler, Kent M. Daane Apr 2018

Foraging Distance Of The Argentine Ant In California Vineyards., Brian N. Hogg, Erik H. Nelson, James R. Hagler, Kent M. Daane

Natural Sciences and Mathematics | Faculty Scholarship

Argentine ants, Linepithema humile (Mayr) (Hymenoptera: Formicidae), form mutualisms with hemipteran pests in crop systems. In vineyards, they feed on honeydew produced by mealybugs and soft scales, which they tend and protect from natural enemies. Few options for controlling Argentine ants are available; one of the more effective approaches is to use liquid baits containing a low dose of an insecticide. Knowledge of ant foraging patterns is required to estimate how many bait stations to deploy per unit area. To measure how far ants move liquid bait in vineyards, we placed bait stations containing sugar water and a protein marker …


Impact Of Sorghum Cultivar, Phenology, Nitrogen, And Silicon Fertilization On Melanaphis Sacchari Biology, Luna Lama Apr 2018

Impact Of Sorghum Cultivar, Phenology, Nitrogen, And Silicon Fertilization On Melanaphis Sacchari Biology, Luna Lama

LSU Master's Theses

The sugarcane aphid, Melanaphis sacchari (Zehntner) (Hemiptera: Aphididae), is an invasive pest of grain sorghum, Sorghum bicolor (L.) Moench. Since its first outbreak in sorghum in 2013, severe infestations have spread throughout the southern U.S. causing high economic losses. While insecticidal control has mitigated some of the impacts of this pest, a sustainable ecology-based management program is needed to reduce reliance on chemical control. We studied the effects of silicon (rates equivalent to 0 and 3360 kg Si/ha) and nitrogen (rates equivalent to 0, 110, and 220 kg N/ha) on M. sacchari growth and reproduction on resistant (DKS 37-07) and …


An Inordinate Fondness For Beetles: A Study Of Insect Species Diversity And Abundance In Mazumbai Forest Reserve Versus Nearby Agricultural Areas, Emma Weisner Apr 2018

An Inordinate Fondness For Beetles: A Study Of Insect Species Diversity And Abundance In Mazumbai Forest Reserve Versus Nearby Agricultural Areas, Emma Weisner

Independent Study Project (ISP) Collection

This study investigates how human disturbance of ecosystems alters insect diversity and abundance, specifically exploring how insect communities inside Mazumbai Forest Reserve in Tanzania differ from insect communities in agricultural areas near the reserve. Following methods of previous studies on the effect of disturbance on insect populations (Bellamy et al. 2018; McLaughlin & Mineau 1995; Perry et al. 2016), this research utilizes pitfall traps and yellow bowl traps in multiple locations throughout the two study areas to catch insects, which are then identified to their specific order. The collected data support the hypothesis that insect order diversity and abundance vary …


Nebline, April 2018 Apr 2018

Nebline, April 2018

NEBLINE Newsletter Archive from Nebraska Extension in Lancaster County

Feature: Can You Pass This Food Safety Quiz?

Food & Health

Farm & Acreage

Pests & Wildlife

Horticulture

Early Childhood

4-H & Youth

and other extension news and events

Special Pullout Section: Weed Awareness


Diurnal And Developmental Differences In Gene Expression Between Adult Dispersing And Flightless Morphs Of The Wing Polymorphic Cricket, Gryllus Firmus: Implications For Life-History Evolution, Anthony J. Zera, Neetha Nanoth Vellichirammal, Jennifer A. Brisson Apr 2018

Diurnal And Developmental Differences In Gene Expression Between Adult Dispersing And Flightless Morphs Of The Wing Polymorphic Cricket, Gryllus Firmus: Implications For Life-History Evolution, Anthony J. Zera, Neetha Nanoth Vellichirammal, Jennifer A. Brisson

Anthony Zera Publications

The functional basis of life history adaptation is a key topic of research in life history evolution. Studies of wing polymorphism in the cricket Gryllus firmus have played a prominent role in this field. However, prior in-depth investigations of morph specialization have primarily focused on a single hormone, juvenile hormone, and a single aspect of intermediary metabolism, the fatty-acid biosynthetic component of lipid metabolism. Moreover, the role of diurnal variation in life history adaptation in G. firmus has been understudied, as is the case for organisms in general. Here, we identify genes whose expression differs consistently between the …


Concepts In Animal Parasitology: References Style Guide, Sue Ann Gardner, Scott Lyell Gardner Apr 2018

Concepts In Animal Parasitology: References Style Guide, Sue Ann Gardner, Scott Lyell Gardner

Concepts in Animal Parasitology

References style guide for authors of the Concepts in Animal Parasitology free, online textbook.


Concepts In Animal Parasitology: Instructions For Authors, Sue Ann Gardner, Scott Lyell Gardner Apr 2018

Concepts In Animal Parasitology: Instructions For Authors, Sue Ann Gardner, Scott Lyell Gardner

Concepts in Animal Parasitology

Instructions for authors for the Concepts in Animal Parasitology free, online textbook.


Concepts In Animal Parasitology: Manuscript Preparation Guidelines, Paul Royster, Sue Ann Gardner, Scott Lyell Gardner Apr 2018

Concepts In Animal Parasitology: Manuscript Preparation Guidelines, Paul Royster, Sue Ann Gardner, Scott Lyell Gardner

Concepts in Animal Parasitology

Zea Books manuscript preparation guidelines for authors of the Concept in Animal Parasitology free, online textbook.


Concepts In Animal Parasitology: Template For Authors For Parts 2-4 (Endoparasites) And Part 5 (Ectoparasites), Sue Ann Gardner, Scott Lyell Gardner Apr 2018

Concepts In Animal Parasitology: Template For Authors For Parts 2-4 (Endoparasites) And Part 5 (Ectoparasites), Sue Ann Gardner, Scott Lyell Gardner

Concepts in Animal Parasitology

Support material for authors of the open educational resource, Concepts in Animal Parasitology, Parts 2-4 (Endoparasites) and Part 5 (Ectoparasites).


Fumigation For The Commercial/Noncommercial Pesticide Applicator: Revision Of The 3rd Edition, 2011, Jerry Heath Apr 2018

Fumigation For The Commercial/Noncommercial Pesticide Applicator: Revision Of The 3rd Edition, 2011, Jerry Heath

Department of Entomology: Distance Master of Science Projects

The primary purpose of this manual is to prepare candidates interested in becoming certified pesticide applicators in Nebraska Category 11, Fumigation. This category includes commercial and non-commercial applicators who use or supervise the use of restricted use pesticides in solid or gaseous formulations within enclosed tight spaces such as tents, vaults, tarped stacks, structures, vehicles or vessels for a wide variety of conditions or commodities, including raw agricultural products.

Not included in the scope of this manual is soil fumigation, Category 1(a). The greatest demand for fumigation is for commodities, food products and food processing facilities. Target pests are mostly …


Compounds Extracted From Heads Of African Stingless Bees (Hypotrigona Species) As A Prospective Taxonomic Tool, N. N. Ndungu, N. Kiatoko, D. K. Masiga, S. K. Raina, C. W.W. Pirk, A. A. Yusuf Apr 2018

Compounds Extracted From Heads Of African Stingless Bees (Hypotrigona Species) As A Prospective Taxonomic Tool, N. N. Ndungu, N. Kiatoko, D. K. Masiga, S. K. Raina, C. W.W. Pirk, A. A. Yusuf

All Peer-Reviewed Publications

Stingless bees are important pollinators of plants, and also producers of honey. Species within the African stingless bee genus Hypotrigona are difficult to differentiate due to morphological similarities. Chemical profiles of whole head extracts from workers of three Hypotrigona species: H. gribodoi, H. araujoi and H. ruspolii were studied by gas chromatography–mass spectrometry. A total of 50 components belonging to six chemical classes: hydrocarbons, aldehydes, alcohols, terpenoids, steroids and fatty acids were identified. Twenty-nine compounds were found in H. araujoi, 26 in H. gribodoi and 33 in H. ruspolii head extracts. Hydrocarbons, alcohols and fatty acids were the major classes, …


Moisture Adsorption Properties And Shelf-Life Estimation Of Dried And Pulverised Edible House Cricket Acheta Domesticus (L.) And Black Soldier Fly Larvae Hermetia Illucens (L.), E. Kamau, C. Mutungi, J. Kinyuru, S. Imathiu, C. Tanga, H. Affognon, S. Ekesi, D. Nakimbugwe, K. K.M. Fiaboe Apr 2018

Moisture Adsorption Properties And Shelf-Life Estimation Of Dried And Pulverised Edible House Cricket Acheta Domesticus (L.) And Black Soldier Fly Larvae Hermetia Illucens (L.), E. Kamau, C. Mutungi, J. Kinyuru, S. Imathiu, C. Tanga, H. Affognon, S. Ekesi, D. Nakimbugwe, K. K.M. Fiaboe

All Peer-Reviewed Publications

Edible insects are part of the diets of a significant proportion of rural populations in the tropics especially Africa and Asia, and their use as source of key nutrients for better nutrition is re-emerging. Indigenously, elemental methods are used to process the insects before they are consumed or sold in retail outlets. In recent years, better knowledge of processing, packaging and storage has become necessary because of commercialisation needs. A common processing approach involves drying after a brief heat-treatment step, and then milling into a powdered product which is sold to manufacturers or consumers as ingredient for processing final products. …


Odour And Feeding Preference Of Noctuid Moth Larvae Conditioned To Vanillin Diet And Non-Vanillin Diet, Christophe Petit, Peter Ahuya, Bruno Le Ru, Laure Kaiser-Arnauld, Myriam Harry, Paul André Calatayud Apr 2018

Odour And Feeding Preference Of Noctuid Moth Larvae Conditioned To Vanillin Diet And Non-Vanillin Diet, Christophe Petit, Peter Ahuya, Bruno Le Ru, Laure Kaiser-Arnauld, Myriam Harry, Paul André Calatayud

All Peer-Reviewed Publications

It is largely accepted that larval experience influence host-plant preference of larvae. In general, larval experience with a host plant induces both an odour and feeding preference for that plant. In a previous study, exposure of three noctuid stem borer species, i.e. Sesamia nonagrioides, Busseola fusca and B. nairobica, to a vanillin-enriched medium induced an olfactory preference for the odours of this medium in the larvae of these species. Here, we checked if the exposure to a vanillin-enriched medium also induced a feeding preference for this diet. Different life stages (i.e. neonate larvae to adults) of the three species were …


Sequence Analysis Of The Potato Aphid Macrosiphum Euphorbiae Transcriptome Identified Two New Viruses, Marcella A. Texeira, Noa Sela, Hagop S. Atamian, Ergude Bao, Rita Chaudhury, Jacob Macwilliams, Jiangman He, Sophie Mantelin, Thomas Girke, Isgouhi Kaloshian Mar 2018

Sequence Analysis Of The Potato Aphid Macrosiphum Euphorbiae Transcriptome Identified Two New Viruses, Marcella A. Texeira, Noa Sela, Hagop S. Atamian, Ergude Bao, Rita Chaudhury, Jacob Macwilliams, Jiangman He, Sophie Mantelin, Thomas Girke, Isgouhi Kaloshian

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

The potato aphid, Macrosiphum euphorbiae, is an important agricultural pest that causes economic losses to potato and tomato production. To establish the transcriptome for this aphid, RNA-Seq libraries constructed from aphids maintained on tomato plants were used in Illumina sequencing generating 52.6 million 75±105 bp paired-end reads. The reads were assembled using Velvet/Oases software with SEED preprocessing resulting in 22,137 contigs with an N50 value of 2,003bp. After removal of contigs from tomato host origin, 20,254 contigs were annotated using BLASTx searches against the non-redundant protein database from the National Center for Biotechnology Information (NCBI) as well as IntereProScan. …