Population Biology Commons^™

The Influence Of Juvenile Dinosaurs On Community Structure And Diversity, Katlin Schroeder, S. Kathleen Lyons, Felisa A. Smith

School of Biological Sciences: Faculty Publications

Despite dominating biodiversity in the Mesozoic, dinosaurs were not speciose. Oviparity constrained even gigantic dinosaurs to less than 15 kg at birth; growth through multiple morphologies led to the consumption of different resources at each stage. Such disparity between neonates and adults could have influenced the structure and diversity of dinosaur communities. Here, we quantified this effect for 43 communities across 136 million years and seven continents. We found that megatheropods (more than 1000 kg) such as tyrannosaurs had specific effects on dinosaur community structure. Although herbivores spanned the body size range, communities with megatheropods lacked carnivores weighing 100 to …

Changes In The Diet And Body Size Of A Small Herbivorous Mammal (Hispid Cotton Rat, Sigmodon Hispidus) Following The Late Pleistocene Megafauna Extinction, Catalina P. Tomé, Emma A. Elliott Smith, S. Kathleen Lyons, Seth D. Newsome, Felisa A. Smith

School of Biological Sciences: Faculty Publications

The catastrophic loss of large-bodied mammals during the terminal Pleistocene likely led to cascading effects within communities. While the extinction of the top consumers probably expanded the resources available to survivors of all body sizes, little work has focused on the responses of the smallest mammals. Here, we use a detailed fossil record from the southwestern United States to examine the response of the hispid cotton rat Sigmodon hispidus to biodiversity loss and climatic change over the late Quaternary. In particular, we focus on changes in diet and body size. We characterize diet through carbon (δ¹³C) and nitrogen …

The Accelerating Influence Of Humans On Mammalian Macroecological Patterns Over The Late Quaternary, Felisa A. Smith, Rosemary E. Elliott Smith, S. Kathleen Lyons, Jonathan L. Payne, Amelia Villaseñor

School of Biological Sciences: Faculty Publications

The transition of hominins to a largely meat-based diet ~1.8 million years ago led to the exploitation of other mammals for food and resources. As hominins, particularly archaic and modern humans, became increasingly abundant and dispersed across the globe, a temporally and spatially transgressive extinction of large-bodied mammals followed; the degree of selectivity was unprecedented in the Cenozoic fossil record. Today, most remaining large-bodied mammal species are confined to Africa, where they coevolved with hominins. Here, using a comprehensive global dataset of mammal distribution, life history and ecology, we examine the consequences of “body size downgrading” of mammals over the …

Body Size Downgrading Of Mammals Over The Late Quaternary, Felisa A. Smith, Rosemary E. Elliott Smith, S. Kathleen Lyons, Jonathan L. Payne

School of Biological Sciences: Faculty Publications

Since the late Pleistocene, large-bodied mammals have been extirpated from much of Earth. Although all habitable continents once harbored giant mammals, the few remaining species are largely confined to Africa. This decline is coincident with the global expansion of hominins over the late Quaternary. Here, we quantify mammalian extinction selectivity, continental body size distributions, and taxonomic diversity over five time periods spanning the past 125,000 years and stretching approximately 200 years into the future. We demonstrate that size-selective extinction was already under way in the oldest interval and occurred on all continents, within all trophic modes, and across all time …

Biotic Interchange Has Structured Western Hemisphere Mammal Communities, Danielle Fraser, S. Kathleen Lyons

School of Biological Sciences: Faculty Publications

Aim.— Many hypotheses posit that species-rich tropical communities are dominated by speciesspecies interactions, apparent as competitive exclusion or character displacement, whereas species-poor temperate communities are dominated by species-environment interactions. Recent studies demonstrate a strong influence of macroevolutionary and biogeographic factors. We simultaneously test for the effects of species interactions, climate, and biotic interchange on Western Hemisphere mammal communities using a phylogenetic and functional diversity approach.

Location.— Western Hemisphere.

Time period.— Modern

Major taxa studied.— Mammalia

Methods.— Using Western Hemisphere mammal distributional and body mass data, we calculate body mass dispersion, phylogenetic diversity (Net Relatedness Index), and assemblage-averaged rates of co-occurrence …

The Maintenance Of Phenotypic Divergence Through Sexual Selection: An Experimental Study In Barn Swallows Hirundo Rustica, Rebecca Safran, Yoni Vortman, Brittany R. Jenkins, Joanna K. Hubbard, Matt Wilkins, Rachel J. Bradley, Arnon Lotem

School of Biological Sciences: Faculty Publications

Previous studies have shown that sexual signals can rapidly diverge among closely related species. However, we lack experimental studies to demonstrate that differences in trait-associated reproductive performance maintain sexual trait differences between closely related populations, in support for a role of sexual selection in speciation. Populations of Northern Hemisphere distributed barn swallows Hirundo rustica are closely related, yet differ in two plumage-based traits: ventral color and length of the outermost tail feathers (streamers). Here we provide experimental evidence that manipulations of these traits result in different reproductive consequences in two subspecies of barn swallow: (H. r. erythrogaster in North …

Comparative Population Genomics Of Latitudinal Variation In Drosophila Simulans And Drosophila Melanogaster, Heather E. Machado, Alan O. Bergland, Katherine R. O'Brien, Emily L. Behrman, Paul S. Schmidt, Dmitri A. Petrov

School of Biological Sciences: Faculty Publications

Examples of clinal variation in phenotypes and genotypes across latitudinal transects have served as important models for understanding how spatially varying selection and demographic forces shape variation within species. Here, we examine the selective and demographic contributions to latitudinal variation through the largest comparative genomic study to date of Drosophila simulans and Drosophila melanogaster, with genomic sequence data from 382 individual fruit flies, collected across a spatial transect of 19 degrees latitude and at multiple time points over 2 years. Consistent with phenotypic studies, we find less clinal variation in D. simulans than D. melanogaster, particularly for the autosomes. Moreover, …

Tiger Salamanders Disappearing In Region, Dennis M. Ferraro

School of Biological Sciences: Faculty Publications

"Where have all the salamanders gone?" 'This is a question I have been increasingly asked over the past five to six years from area residents. It seems we are observing a dramatic population decline of the western barred tiger salamander in parts of Southeast Nebraska. The western barred tiger salamander (Ambystoma mavortium) is one of only two salamanders in Nebraska. Over the past two years, none have been found in southeast Nebraska.

Salamanders, like all amphibians, are excellent indicator species. In many cases they act like the iconic canary in the mine shaft, telling us when to run …

Measuring The Robustness Of Network Community Structure Using Assortativity, Daizaburo Shizuka, Damien R. Farine

School of Biological Sciences: Faculty Publications

The existence of discrete social clusters, or ‘communities’, is a common feature of social networks in human and nonhuman animals. The level of such community structure in networks is typically measured using an index of modularity, Q. While modularity quantifies the degree to which individuals associate within versus between social communities and provides a useful measure of structure in the social network, it assumes that the network has been well sampled. However, animal social network data is typically subject to sampling errors. In particular, the associations among individuals are often not sampled equally, and animal social network studies are often …

Socio-Economic Instability And The Scaling Of Energy Use With Population Size, John P. Delong, Oskar Burger

School of Biological Sciences: Faculty Publications

The size of the human population is relevant to the development of a sustainable world, yet the forces setting growth or declines in the human population are poorly understood. Generally, population growth rates depend on whether new individuals compete for the same energy (leading to Malthusian or density-dependent growth) or help to generate new energy (leading to exponential and super-exponential growth). It has been hypothesized that exponential and super-exponential growth in humans has resulted from carrying capacity, which is in part determined by energy availability, keeping pace with or exceeding the rate of population growth. We evaluated the relationship between …

Spatiotemporal Variation In Flow-Dependent Recruitment Of Long-Lived Riverine Fish: Model Development And Evaluation, Daisuke Goto, Martin J. Hamel, Jeremy J. Hammen, Mathew L. Rugg, Mark A. Pegg, Valery E. Forbes

School of Biological Sciences: Faculty Publications

Abstract Natural flow regimes can play a major role as an overarching ecosystem driver in reproduction and recruitment of riverine fishes. Human needs for freshwater however have altered hydrology of many riverine systems worldwide, threatening fish population sustainability. To understand and predict how spatiotemporal dynamics of flow regimes influence reproductive and recruitment variability, and ultimately population sustainability of shovelnose sturgeon (Scaphirhynchus platorynchus), we develop a spatially explicit (1D) individual-based population model that mechanistically (via energetics-based processes) simulates daily activities (dispersal, spawning, foraging, growth, and survival). With field observations of sturgeon and habitat conditions in a major tributary of …

Across-Year Social Stability Shapes Network Structure In Wintering Migrant Sparrows, Daizaburo Shizuka, Alexis S. Chaine, Jennifer Anderson, Oscar Johnson, Inger Marie Laursen, Bruce E. Lyon

School of Biological Sciences: Faculty Publications

Migratory birds often form flocks on their wintering grounds, but important details of social structure such as the patterns of association between individuals are virtually unknown. We analysed networks of co-membership in short-term flocks for wintering golden-crowned sparrows (Zonotrichia atricapilla) across three years and discovered social complexity unsuspected for migratory songbirds. The population was consistently clustered into distinct social communities within a relatively small area (~ 7 ha). Birds returned to the same community across years, with mortality and recruitment leading to some degree of turnover in membership. These spatiotemporal patterns were explained by the combination of space …

Variation In The Local Population Dynamics Of The Short-Lived Opuntia Macrorhiza (Cactaceae), Chirakkal V. Haridas, Kathleen Keeler, Brigitte Tenhumberg

School of Biological Sciences: Faculty Publications

Spatio-temporal variation in demographic rates can have profound effects for population persistence, especially for dispersal-limited species living in fragmented landscapes. Long-term studies of plants in such habitats help with understanding the impacts of fragmentation on population persistence but such studies are rare. In this work we reanalyzed demographic data from seven years of the short-lived cactus Opuntia macrorhiza var. macrorhiza at five plots in Boulder, Colorado. Previous work combining data from all years and all plots predicted a stable population (deterministic log λ ≈ 0). This approach assumed that all five plots were part of a single population. Since the …

Larval Performance And Kill Rate Of Convergent Ladybird Beetles, Hippodamia Convergens, On Black Bean Aphids, Aphis Fabae, And Pea Aphids, Acyrthosiphon Pisum, Travis M. Hinkelman, Brigitte Tenhumberg

School of Biological Sciences: Faculty Publications

Generalist predator guilds play a prominent role in structuring insect communities and can contribute to limiting population sizes of insect pest species. A consequence of dietary breadth, particularly in predatory insects, is the inclusion of low-quality, or even toxic, prey items in the predator’s diet. Consumption of low-quality prey items reduces growth, development, and survival of predator larvae, thereby reducing the population sizes of generalist predators. The objective of this paper was to examine the effect of a suspected low-quality aphid species, Aphis fabae (Scopoli) (Hemiptera: Aphididae), on the larval performance of an abundant North American predator, Hippodamia convergens (Guérin-Méneville) …

Global Attracting Equilibria For Coupled Systems With Ceiling Density Dependence, Eric A. Eager, Mary Hebert, Elise Hellwig, Francisco Hernandez, Richard Rebarber, Brigitte Tenhumberg, Bryan Wigianto

School of Biological Sciences: Faculty Publications

In this paper, we present a system of two difference equations modeling the dynamics of a coupled population with two patches. Each patch can house only a limited number of individuals (called a carrying capacity) because resources like food and breeding sites are limited in each patch. We assume that the population in each patch is governed by a linear model until reaching a carrying capacity in each patch, resulting in map which is nonlinear and not sublinear. We analyze the global attractors of this model.

Bacterial Community Structure Of Contrasting Soils Underlying Bornean Rain Forests: Inferences From Microarray And Next-Generation Sequencing Methods, Sabrina E. Russo, Ryan Legge, Karrie A. Weber, Eoin L. Brodie, Katherine C. Goldfarb, Andrew K. Benson, Sylvester Tan

School of Biological Sciences: Faculty Publications

Soil microbial diversity is vast, and we lack even basic understanding of how this diversity is distributed ecologically. Using pyrosequencing and microarray methods, we quantified the structure of bacterial communities in two contrasting soils underlying Bornean rain forest (clay and sandy loam) that differ markedly in soil properties, aboveground tree flora, and leaf litter decomposition rates. We found significant soil-related taxonomic and phylogenetic differences between communities that, due to their proximity, are independent of climate. Bacterial communities showed distinct compositional and taxon-abundance distributions that were significantly correlated with the structure of the overlying tree community. Richness of bacteria was greater …

Population Dynamics Of The Western Prickly Pear, Opuntia Macrorhiza (Cactaceae), Kathleen H. Keeler, Brigitte Tenhumberg

School of Biological Sciences: Faculty Publications

Although most cacti that have been studied are long lived, following individually marked plants in Boulder County, Colorado, for >7 years, we determined that average life span of Opuntia macrorhiza, the western prickly pear, is 3 years. A few individuals probably live >10 years. Vegetative reproduction, produced by rooting of cladodes, exceeded reproduction by germination and establishment from seeds. Both types of new recruits, from vegetative reproduction and seeds, had higher death rates than established plants. Size and frequency of flowering increased with age, although size both increased and decreased, sometimes dramatically, between years. Flowering correlated more strongly with …

Population Biology Of Intraspecific Polyploidy In Grasses, Kathleen H. Keeler

School of Biological Sciences: Faculty Publications

Polyploidy is the duplication of an entire nuclear genome, whether diploid or higher level (Stebbins, 1971; Thompson & Lumaret, 1992) and a frequent occurrence in plants. Stebbins (1971) estimated that 30-35% of flowering plant species are polyploid, and that many more had a polyploid event in their evolutionary history, including all members of such important families as the Magnoliaceae, Salicaceae, and Ericaceae. Goldblatt (1980) estimated 55%, but probably up to 75%, of monocotyledons had at least one polyploid event in their history, using the criterion that if the species has a base number higher than n=13 it is derived …

Population Processes, Kathleen H. Keeler, Anthony Joern

School of Biological Sciences: Faculty Publications

Within the prairies, myriad populations of plants, insects, small mammals, and other organisms form distinct levels of organization. The physical forces of weather and fire and the complex networks of species interactions control each species’s structure and dynamics and determine its abundance or rarity. Variation in population dynamics and interactions over time and space determine the distribution and abundance of species, and ultimately the composition and dynamics of entire prairie communities.

To the casual observer, plant populations on prairies may seem quite static, like museums containing a diverse collection of specimens that can be seen again and again on repeated …

Fifteen Years Of Colony Dynamics In Pogonomyrmex Occidentalis, The Western Harvester Ant, In Western Nebraska, Kathleen H. Keeler

School of Biological Sciences: Faculty Publications

Ecological communities respond to environ- mental changes as the individuals of the component species die and are replaced. Thus, pat- terns of population turnover form an important aspect of community processes. Much less is known about species of long-lived individuals than of short-lived ones (Likens, 1989).

Instantaneous observations of age structure can be used to infer long-term dynamics but not all species can be aged retrospectively. Inferring life- history dynamics from current populations requires assumptions that are hard to verify. Following marked colonies of long-lived species is slow but provides direct, non-inferential data on population dynamics, although those are specific …

Colony Survivorship In Pogonomyrmex Occidentalis, Western Harvester Ant, In Western Nebraska, Kathleen H. Keeler

School of Biological Sciences: Faculty Publications

Little is known about the life span of individual ant colonies (Keeler, 1981), even though the dynamics of some species, such as harvester ants, are crucial to the structure of plant and animal communities (e.g., Brown et al., 1979). This note reports the results of 10 years of observations on a population of harvester ants.

Fifty-six mounds of Pogonomyrmex occidentalis Cresson (Hymenoptera: Formicidae), western harvester ant, were permanently marked with aluminum tags in August 1977. The site, about 1 ha just south of the University of Nebraska's Cedar Point Biological Station, Keith Co., Nebraska, was within a pasture subject to …

Vegetation Patterns In Relation To Topography And Edaphic Variation Nebraska Sandhills Prairie, P. W. Barnes, A. T. Harrison, S. P. Heinisch

School of Biological Sciences: Faculty Publications

Detailed studies on soil texture and moisture retention indicate a close association between edaphic features and the distribution and composition of plant communities along topographic gradients at Arapaho Prairie, a typical, semi-arid Nebraska Sandhills prairie. The vegetation characteristics of three major habitat types (ridge, slope, and valley) and several minor subtypes (swale, stable ridge, and eroding ridge) are recognized and quantitatively described. Texture analysis indicates that the soils of dune slopes and ridges are largely azonal and are very coarse with substantially lower fine fractions (silt-clay ~ 13-15%) than soils of the more lowland swale and valley sites where surfact …

Preliminary Report Of Colony Survivorship In The Western Harvetser Ant (Pogonomyrmex Occidentalis) In Western Nebraska, Kathleen H. Keeler

School of Biological Sciences: Faculty Publications

Colonies of Pogonomyrmex occidentalis Cresson (Hymenoptera: Formicidae) may live an average of 22 to 43 years. The population dynamics of individual colonies of P. occidentalis adjacent to the Univ. Nebraska's Cedar Point Biol. Sta., Keith Co., Nebraska, is the subject of an ongoing investigation. The habitat is a moderately grazed shortgrass prairie dominated by Bouteloua hirsuta, B. gracilis, and Buchloe dactyloides, with Stipa comata, Aristida spp., and various forbs. The colonies studied are in a triangular area about 400 m long and 100 m across at the widest point. The area appears to be at carrying …