Other Ecology and Evolutionary Biology Commons^™

Density And Mass Effect On The Development Of Phormia Regina, Brandon H. Strauss

School of Natural Resources: Dissertations, Theses, and Student Research

Forensic entomology is the application of the study of arthropods to the criminal justice system. This is primarily done through the development of a post mortem interval (PMI) based the insect evidence present. A practitioner must be able to determine the age of the insect through temperature data. One factor influencing the temperature dependent development is gregarious behavior. Current literature describes a faster development rate due to an increase in feeding efficiency and temperatures produced by this aggregate. However, there is very little literature defining a minimum number needed to induce this effect and little to none on it for …

Assessment Of Wildlife Rehabilitation Trends: Domestic Dog And Cat Attacks, Rachel Wilson

Undergraduate Honors Thesis Projects

Human-wildlife conflict is a growing concern, and domestic cat predation is estimated to be responsible for billions of wildlife deaths every year in the Unites States. Domestic dog predation has been less well studied, but as dogs are the second most numerous pet in the U.S. after cats, their impact on native wildlife should also be assessed. One method to assess domestic animal predation is to examine trends in wildlife rehabilitation records. Using the online database WILD-ONe, I analyzed over 31,000 wildlife hospital records in the United States from 2011-2016. During this time span, data showed over 14,000 domestic dog …

Phylogenetic History Of The Amy Gene Cluster In Catarrhines, Christian M. Gagnon

Theses and Dissertations

This study phylogenetically analyzed 30 AMY-related genes from 11 primates. The results show the gradual expansion of the AMY gene family which could have allowed primates to adapt to various ecological landscapes and maximize energy intake from starch-rich foods in periods of food scarcity.

Climatic Variables Are Strong Predictors Of Allonursing And Communal Nesting In Primates, Alexandra Louppova

Theses and Dissertations

Allomaternal care (AMC) is widespread throughout the primate order, previous studies have focused on benefits and costs to individuals. However, our understanding of environmental impacts on AMC behaviors in primates is still limited. Our study examines how ecology and environmental factors can predict certain AMC behaviors more than others.

Concept Inventories As A Resource For Teaching Evolution, Robert E. Furrow, Jeremy L. Hsu

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Understanding evolution is critical to learning biology, but few college instructors take advantage of the body of peer-reviewed literature that can inform evolution teaching and assessment. Here we summarize the peer-reviewed papers on tools to assess student learning of evolutionary concepts. These published concept inventories provide a resource for instructors to design courses, gauge student preparation, identify key misconceptions in their student population, and measure the impact of a lesson, course, or broader curriculum on student learning. Because these inventories vary in their format, target audience, and degree of validation, we outline and explain these features. In addition to summarizing …

Cichlid Size Vs Flow Rate, Amy E. Naumovski

STAR Program Research Presentations

Cichlids are a diverse group of fish that are known for their prenatal and postnatal care of their eggs and frys (baby fish). This unique characteristic creates a limitation on the amount of eggs a cichlid can lay and protect, which is particulalry effected by the size of the eggs. Cichlids have a large variance in their egg size, which correlates to a large variance in their fry size. This project explores the trade offs cichlids make in egg size and fry size by specifically testing the ability of varying sized cichlids to swim in different flow rates. This could …

Tiger Sharks Eat Songbirds: Reply, J. Marcus Drymon, K. Feldheim, A. M.V. Fournier, A. E. Jefferson, A. M. Kroetz, Sean P. Powers, E. A. Seubert

University Faculty and Staff Publications

In response to our recent paper (Drymon et al. 2019), Yosef (2019) questions the mechanism proposed to explain interactions between tiger sharks (Galeocerdo cuvier) and migratory songbirds, while offering an alternative mechanism based on a single observation. We appreciate the comments from Yosef and the opportunity to respond.

Tiger Sharks Eat Songbirds: Scavenging A Windfall Of Nutrients From The Sky, J. Marcus Drymon, K. Feldheim, A. M.V. Fournier, E. A. Seubert, A. E. Jefferson, A. M. Kroetz, Sean P. Powers

University Faculty and Staff Publications

No abstract provided.

Trade-Offs Shape Carotenoid-Based Color Variation In Redheaded Pine Sawfly (Neodiprion Lecontei) Larvae, Maranda Gaines

Lewis Honors College Capstone Collection

Carotenoids serve various ecological roles in animals including coloration, immune responses, and vision. Carotenoid-derived coloration is greatly emphasized in the literature, particularly relating to mate choice and aposematic warning. However, the trade-offs between the color and non-color functions of carotenoids are not thoroughly explored. In the redheaded pine sawfly (Neodiprion lecontei), some larval populations have yellow pigmentation, using carotenoids derived from their diets for aposematic warning coloration. Other larval populations are white in color, having genetically lost the ability to produce the yellow pigment. Because carotenoids are essential to life functions in both the yellow and white populations, we aim …

The Marin County Livestock Protection Program: 15 Years In Review, Stephanie Larson, Devan A. Mcgranahan, Robert M. Timm

Human–Wildlife Interactions

Predation by wild carnivores challenges livestock producers worldwide. To reduce or offset losses due to predation, a variety of predator control methods and compensation schemes have been developed. In 2001, Marin County, California, USA replaced its U.S. Department of Agriculture Wildlife Services (WS) cooperative predator damage management program with a county-run program that emphasized nonlethal methods for preventing and controlling coyote (Canis latrans) predation on domestic sheep (Ovis aries). This new Livestock Protection Program (LPP) cost-shared with livestock producers’ efforts to improve fencing, obtain and maintain guard animals, and other such nonlethal methods, and initially it …

Effectiveness Of Snap And A24-Automated Traps And Broadcast Anticoagulant Bait In Suppressing Commensal Rodents In Hawaii, Aaron B. Shiels, Tyler Bogardus, Jobriath Rohrer, Kapua Kawelo

Human–Wildlife Interactions

Commensal rodents (invasive rats, Rattus spp.; house mice, Mus musculus) are well established globally. They threaten human health by disease transfer and impact economies by causing agricultural damage. On island landscapes, they are frequent predators of native species and affect biodiversity. To provide managers with better information regarding methods to suppress commensal rodent populations in remote island forests, in 2016 we evaluated the effectiveness of continuous rat trapping using snap-traps, Goodnature^®A24 self-resetting rat traps, and a 1-time (2-application) hand-broadcast of anticoagulant rodenticide bait pellets (Diphacinone-50) applied at 13.8 kg/ha per application in a 5-ha forest on Oahu, …

The Impact Of Prescribed Fire On Moth Assemblages In The Boston Mountains And Ozark Highlands, In Arkansas, Erin E. Guerra, Cristina M. Blanco, Jorista Garrie

Journal of the Arkansas Academy of Science

In addition to the impacts of prescribed fires on forest vegetation, this ecosystem process also has dramatic impacts on associated insect assemblages. For herbivorous, terrestrial insects, fire predictably results in a cycle of initial insect population reduction followed by recovery and growth, in which these insect populations exceed pre-fire abundances. We sought to examine if fire-induced disturbance cycles make prescribed burned areas more or less suitable specifically for moths (order Lepidoptera), which is a major food source for, among others, multiple bat species. We surveyed moth assemblages at 20 burned and 20 unburned sites in the Boston Mountain and Ozark …

Tree Squirrels And Fishers In Northern California: The Effects Of Masting Hardwoods On Stand Use, Andria M. Townsend

Cal Poly Humboldt theses and projects

In western North America, tree squirrels such as western gray (Sciurus griseus) and Douglas squirrels (Tamiasciurus douglasii) are potentially important prey for fishers (Pekania pennanti). Western gray squirrels in particular may be highly ranked due to their large body size. Masting trees including black oak (Quercus kelloggii) and tanoak (Notholithocarpus densiflorus) produce an important food source for tree squirrels; therefore, forest stands containing these trees may be useful to foraging fishers. I hypothesized that; 1) the abundance of western gray and Douglas squirrels in a stand is influenced by the …

Evidence For A New Search Behavior: Porcupines “Scout” For Winter Habitat During Summer In A Coastal Dune System, Pairsa N. Belamaric

Cal Poly Humboldt theses and projects

Species are often challenged by periodic changes in food availability and habitat quality. These environmental conditions may provide strong selective pressure for animals to strategically "scout" for important resources during periods of abundance, when exploratory movements are less costly. North American porcupines experience a drastic shift in forage quality from summer - a time of abundant, high quality forage - to winter, a nutritional bottleneck. I evaluated potential scouting behaviors of porcupines in Tolowa Dunes State Park, California using movement and habitat-use data. I compared summer and winter space use of porcupines using GPS data and monitored seasonal use of …

Upper Thermal Limits Vary Among And Within Native Bee Species In Relation To Season, Voltinism, And Nest Type, Kálmán K. Csigi Xiv

Theses and Dissertations

Native bees are only recently gaining attention for the extent to which they aid in pollination and ecosystem services. These services are threatened by predictions of warming temperatures if bees are not able to respond. Voltinism - the number of generations produced annually- can strongly influence thermal conditions experienced by both developing and adult bees based on emergence strategies for each voltinism type. Differences in experienced thermal conditions brought on by climate change could therefore affect upper thermal limits (UTL) in bees. This study observes UTLs across a foraging season within and among native bee species vi to elucidate the …

Symbiotic Bacteria Can Colonize Closely-Related, But Not Distantly-Related Species Of Its Host Dictyostelium Discoideum, Rory Vu Mather

Undergraduate Research Symposium Posters

Some of the closest interactions between organisms can be found within symbioses, where different individuals live in close physiological contact and either benefit or harm the other. A powerful kind of benefit comes when bacterial symbionts produce amino acids or provide digestive capabilities outside the host’s ability, in essence taking advantage of the other’s genetic catalog. One such symbiosis is that of the social amoeba Dictyostelium discoideum and its bacterial symbionts Burkholderia agricolaris, Burkholderia hayleyella, and Burkholderia bonneia. In this symbiosis, Burkholderia provide the capability of carrying food bacteria to their host, an advantageous trait when bacterial food is rare. …

Loss Of A Foundation Species, Eastern Hemlock (Tsuga Canadensis), May Lead To Biotic Homogenization Of Fungal Communities And Altered Bacterial Abundance In The Forest Floor, Aliza Fassler, Jesse Bellemare, Danielle D. Ignace

Biological Sciences: Faculty Publications

Tsuga canadensis (Eastern Hemlock) is a key forest foundation species that is currently declining across the eastern US due to attack by exotic insect species, primarily Adelges tsugae (Hemlock Woolly Adelgid). In the northeastern US, declining Eastern Hemlock stands are typically replaced by fast-growing deciduous Betula lenta (Black Birch) trees, altering ecosystem processes and ecological communities. In this study, we used an approach that substituted space for time to explore how the forest floor's soil organic horizon, macrofungal communities, and bacterial abundance might be altered following Eastern Hemlock replacement by Black Birch. We compared intact, mature Eastern Hemlock forest plots …

Evaluation Of Range-Wide Occupancy And Survey Methods For The Giant Kangaroo Rat (Dipodomys Ingens), Alyssa E. Semerdjian

Cal Poly Humboldt theses and projects

Though habitat suitability and occupancy are often correlated, they cannot always be inferred from each other. Therefore, a solid understanding of both is essential to effectively manage species. Recent studies have assessed range-wide habitat suitability for the giant kangaroo rat (Dipodomys ingens; GKR), but data regarding occupancy is lacking in parts of its distribution. Satellite and aerial imagery were used to identify GKR burrows across their known range, producing a range-wide occupancy map and non-invasive survey methods including track plates, manned flight, unmanned aerial vehicle, and sign surveys were conducted to determine effective methods for monitoring GKR occupancy. …

Ecological Consequences Of Sea Star Wasting Disease: Non-Consumptive Effects And Trait-Mediated Indirect Interactions From Pisaster Ochraceus, Timothy Ian Mcclure

Cal Poly Humboldt theses and projects

Consumptive effects (CEs) of predators are an important factor in structuring biological communities, but further work is needed to understand how the interaction between spatial and temporal differences in predator density affects non-consumptive effects (NCEs) on prey. NCEs can cause indirect effects on food resources, known as trait-mediated indirect interactions (TMIIs), and thus can also affect community structure. However, few studies have considered the relationships between spatial and temporal predator density variation and the strength of NCEs and TMIIs in the natural environment. The ochre star Pisaster ochraceus is common predator of the herbivorous black turban snail Tegula funebralis, imposing …

Life History Of The Coastal Tailed Frog (Ascaphus Truei) Across An Elevational Gradient, Adrian Daniel Macedo

Cal Poly Humboldt theses and projects

The life history of a species is described in terms of its growth, longevity, and reproduction. Unsurprisingly, life history traits are known to vary in many taxa across environmental gradients. In the case of amphibians, species at high elevations and latitudes tend to have shorter breeding seasons, shorter activity periods, longer larval periods, reach sexual maturity at older ages, and produce fewer and larger clutches per year.

The Coastal Tailed Frog (Ascaphus truei) is an ideal species for the study of geographic variation in life history because it ranges across most of the Pacific Northwest from northern California …

Fire And Road Disturbance Impacts On Forest Plant Species And Seed Rain In Table Mountain Fire Arai, Kittitas County, Washington, Jonathan A. Betz

All Master's Theses

Forest communities are in a constant state of change. Disturbance events can alter the physical landscape and create conditions favorable to some species while negatively impacting others. Fire has been a natural, reoccurring source of disturbance in Pacific Northwest forests. Over the past centuries the fire paradigm has changed in favor of fire suppression. Forest roads permit access provide greater access but further fracture forest community’s continuity. The 2012 Table Mountain Fire and road influence have altered the plant community’s seed rain and vegetation. This study measured dispersed seeds and understory vegetation cover as functions of roads and fire intensity. …

Effects Of Fragmentation On Species Retention In National Parks, Liz Tanner

Master's Theses or Doctor of Nursing Practice

The North American landscape is becoming increasingly fragmented, resulting in habitat patches with decreased area and increased isolation. Often, these patches exist as protected areas, such as national parks. The Theory of Island Biogeography is frequently used as a model for these patches, where each park serves as an ‘island’ surrounded by a ‘sea’ of human-altered habitats. As such, species richness and extinctions in a park might be explained by its area. For this study, I used regression models to examine the relationship between richness and area, as well as extinctions and area, for mammals and birds in national parks. …

Efficacy Of An Online Native Snake Identification Search Engine For Public Use, Scott E. Henke, Samantha S. Kahl, David B. Wester, Gad Perry, David Britton

Human–Wildlife Interactions

Visual methods of species identification are used both in research and recreational contexts because they are inexpensive, non-invasive, and believed to be effective among uniquely identifiable individuals. We examined the ability of the general public to identify live snakes (Serpentes) that are native to the United States using an online snake identification search engine (SISE) produced by the North America Brown Tree Snake Control Team (NABTSCT) website, http://www.nabtsct.net. The SISE consisted of participants answering 7 descriptive questions concerning a snake and then reviewing photographs of snakes that matched that description. Using 3 species of snakes native to Texas, USA, 21% …

Modeling Genomes To Phenomes To Populations In A Changing Climate: The Need For Collaborative Networks, Nika Galic, Allyson G. Hindle, John P. Delong, Karen Watanabe, Valery Forbes, C. Loren Buck

School of Biological Sciences: Faculty Publications

Condensed Abstract

Climate is changing globally and its impacts can arise at different levels of biological organization; yet, cross-level consequences of climate change are still poorly understood. Designing effective environmental management and adaptation plans requires implementation of mechanistic models that span the biological hierarchy. Because biological systems are inherently complex and dynamic in nature, dealing with complexities efficiently necessitates simplification of systems or approximation of relevant processes, but there is little consensus on mathematical approaches to scale from genes to populations. Here we present an effort that aims to bring together groups that often do not interact, but that are …

Transgenerational Plasticity Is Sex-Dependent And Persistent In Yellow Moneyflower (Mimulus Guttatus), Kayla Akkerman

All Master's Theses

Transgenerational phenotypic plasticity, whereby environmental cues experienced by parents alter the phenotype of their progeny, has now been documented in diverse organisms. Transmission of environmentally determined responses is known to occur through both maternal and paternal gametes, but the underlying mechanisms have rarely been compared. In addition, the persistence of induction over multiple generations appears to vary widely but has been characterized for relatively few systems. Yellow monkeyflower (Mimulus guttatus) is known to exhibit transgenerational induction of increased glandular trichome production in response to simulated insect damage. Here we test for differences between maternal and paternal transmission of …

Examining Aspen Expansion From Before And After Prescribed Burning In A Native Fescue Grassland Through Geospatial Techniques, Christopher Anderson

Dissertations, Master's Theses and Master's Reports

Native fescue (Fescue spp.) grasslands of the Intermountain West have become increasingly scarce due to the advent of modern agriculture, the loss of Indigenous people’s land management practices, modern wildfire management and the extirpation of bison (Bison bison bison). Native grassland is a biodiversity hot-spot, is significant for carbon sequestration, and essential to many species of flora and fauna that occur in the ecosystem. Our study site, on the Rocky Mountain Front in Waterton Lakes National Park, Alberta Canada, consists of 30 discrete aspen stands (Populous tremuloides) which are encroaching on this declining shortgrass fescue …

Shaping The Tools Of Battle : Sexual Selection, Contest Dynamics, And Weapon Divergence In The Asian Rhinoceros Beetle Trypoxylus Dichotomus, Jillian F. Del Sol

Graduate Student Theses, Dissertations, & Professional Papers

Exaggerated weapons of sexual selection often diverge more rapidly and dramatically than other body parts, suggesting that relevant agents of selection may be discernible in contemporary populations. I examined the ecology, reproductive behavior, and strength of sexual selection on horn length in five recently diverged beetle populations that differ in relative horn size. I show that mating system ecology differs between these locations and corresponds with the local strength of contemporary selection on horn length. Comparisons of ecological conditions and selection strength across populations offer a critical first step towards meaningfully linking mating system dynamics, selection patterns, and diversity in …

Estimating Space Sharing Between Seabird, Pinniped, And Human Use In The Northern California Coast, Claire Marie Nasr

Cal Poly Humboldt theses and projects

Rocky coastlines incur high impacts from human use, but these places are also essential habitat for marine wildlife including seabirds and pinnipeds (seals and sea lions). Marine wildlife use coastal rocks to breed, rest, and engage in social interaction and exhibit different habitat use during the breeding and non-breeding season. Peak timing of human use occurs in spring summer, coinciding with breeding seasons for colonial seabirds and gregarious pinnipeds. The high potential of spatial and temporal overlap between human and seabird use of rocky coastlines could lead to high risk of disturbance events. I investigated the relative risk of disturbance …

Eternal Enemies, Or Incidental Encounters? Structure And Patterns Of Interspecific Killing In Carnivora, Tor G. Bertin

Theses and Dissertations

Lethal interactions between carnivorans (interspecific killing) may influence their population dynamics, behavior, and other important aspects of their ecology. In this study, I expand upon previous research on the broad-scale patterns of interspecific killing in Carnivora (Palomares & Caro 1999, Donadio & Buskirk 2006) with a greatly expanded dataset (inclusion of scat and stomach data and more intensive sampling of the literature), and suggest avenues for future research. While like previous studies, I found a positive effect of relative body size between killer species and killed species on the likelihood of forming a killing interaction, I failed to find evidence …

Testing For Cryptic Diversity And Inference Of Population Structure In The Cosmopolitan Hoplonemertean Emplectonema Gracile (Nemertea), Paul L. Delaney Iv

Theses and Dissertations

Emplectonema gracile (Johnston 1837) is a hoplonemertean of marine intertidal hard-bottom communities and is distributed throughout the Northern Hemisphere. Although possessing a planktonic larval stage in its life history, the range of such cosmopolitan marine invertebrate species is often explained by cryptic speciation and anthropogenic transport. The purpose of this study is to test for possible cryptic species using mtDNA markers (COI and 16S rDNA) and to investigate population structure in E. gracile over a portion of its geographic range using mtDNA markers and ddRADseq nuclear SNP data. The results of both phylogenetic- and tree-based species delimitation revealed that E. …