Other Ecology and Evolutionary Biology Commons^™

A Dynamic Landscape Of Fear: Human Impacts On Carnivore Communities, Tru Hubbard

All NMU Master's Theses

Mammalian carnivores are elusive, enigmatic species that often play keystone roles in ecosystems through direct (i.e., predation) and indirect (i.e., perceived predation risk) effects. Worldwide many carnivore species are experiencing rapid human-mediated population declines due to landscape change and habitat disturbance. For researchers, carnivores present unique challenges due to their large home ranges, low population densities, sensitivity to human disturbance, and direct persecution. Further, growing evidence shows that human activity can impact carnivore behavior and community structure by altering predator-prey interactions, shifting diel activity patterns, and altering wildlife movement leading to increased sightings, nuisance reports, and harvests. To investigate how …

Particle Tracking Reveals Pelagic Red Crabs As Indicators Of Climate-Driven Range Expansion In The California Current, Elizabeth Saraf

Senior Honors Projects

Since their first recorded occurrence in 1859, Pelagic Red Crabs (PRC; Pleuroncodes planipes) have experienced increased frequency of episodic mass stranding events in the Eastern Pacific Ocean. PRC’s are transported over 1,000 km northward of their central domain from the coast of central Baja California, Mexico. They have been reported by the thousands on the beaches of central and southern California. Their presence influences the surrounding ecosystem and commercial fisheries because they are nutritional prey items and large predators change their diet to incorporate PRC’s when they are available. Seasonal coastal currents and the California Undercurrent transport warmer waters …

Density Dependent Growth Of Pseudomonas Fluorescens In The Presence And Absence Of C. Elegans Predation In Liquid Media, Jack Landmann

Honors Theses

The purpose of this study was to understand the predator-prey relationship between C. elegans worms and P. fluorescens bacteria in liquid media. We were aiming to create a predation model of the relationship between these two species.

This study was performed through three experiments. Using 96-well plates, we were able to measure the change in optical density (OD) of these wells and calculate the growth rate. This growth rate was then graphed and analyzed. The first experiment contained P. fluorescens and KB liquid media, this study demonstrated that the bacterial population has a carrying capacity. We were also able to …

Insect Hotels: A Biological Remedy For The Survivability Of Insects And The Human Species, Lewis University

Sustainability

No abstract provided.

Ecological Impacts Of Apiaries, Lewis University

Sustainability

The Come Clean, Go Green competition is a program dedicated to making Lewis a more sustainable campus with ideas from Lewis Students across all disciplines. The program is sponsored by the Lewis University Sustainability Council and supported by, the sustainability fee, which was approved last year. The fee will fund the implementation of sustainability projects on campus that are chosen by students.

Morph- And Sex-Specific Differences In Corticosterone Of The Arizona Tiger Salamander (Ambystoma Mavortium Nebulosum), Megan Zerger

Scholars Week

Life history morph, sex, and body condition are traits that may influence stress within salamander populations because of differences in physiology and environmental conditions. Given widespread declines and the effects chronic stress can have on amphibian health, it is important to understand within-population drivers of stress and how population level variation may influence population viability. Thus, the objective of our study was to assess how corticosterone varies within the Arizona tiger salamander (Ambystoma mavortium nebulosum) population at the Mexican Cut Nature Preserve. We used a non-invasive skin swabbing method to collect baseline and elevated corticosterone from paedomorph (aquatic …

Mussel Musings On The Powell River, Aggy Vanderpool

Cumberland Mountain Naturalist

No abstract provided.

A Record Of Vapour Pressure Deficit Preserved In Wood And Soil Across Biomes, Adrian Broz, Gregory J. Retallack, Toby M. Maxwell, Lucas C.R. Silva

Biology Faculty Publications and Presentations

The drying power of air, or vapour pressure deficit (VPD), is an important measurement of potential plant stress and productivity. Estimates of VPD values of the past are integral for understanding the link between rising modern atmospheric carbon dioxide (pCO₂) and global water balance. A geological record of VPD is needed for paleoclimate studies of past greenhouse spikes which attempt to constrain future climate, but at present there are few quantitative atmospheric moisture proxies that can be applied to fossil material. Here we show that VPD leaves a permanent record in the slope (S) of least-squares …

Understanding Patterns And Functional Impacts Of An Invasive Tree And Its Biological Control In A Riparian System, Annie L. Henry

Electronic Theses and Dissertations

Invasive species have become an inextricable part of the landscape, particularly in riparian plant communities, and removal is often a key component of restoration programs. Biological control (biocontrol) is a method of removal that is often both efficient and effective. However, the impact of biocontrol on target species and indirect effects from invasive species removal can be hard to predict. While monitoring the impact of invasive species removal usually involves some species-based assessment such as changes in diversity, historically dominant species or native species, these strategies do not typically provide insight into the mechanisms underlying plant community response to removal. …

Cost Of Co-Infection In Peromyscus Leucopus Mice, Ananya Sagar

Scripps Senior Theses

Abstract

Co-infections occur frequently across humans & wildlife, and can have effects on host health. Despite the prevalence of microparasite-helminth co-infections, majority of the research focuses either on singular infections or on concurrent infections in a laboratory setting. This fails to take into account the interspecific interactions between the multiple parasites and the host in natural settings. The interactions could be direct by resource competition, or indirect via the host immune system. In our research, we studied the relationship between nematodes and coccidia in their host, Peromyscus leucopus mice, at the Mountain Lake Biological Station, Virginia. We further evaluated the …

Determining Environmental Changes Using Time Lapse Photography, Emily Lemasters

Williams Honors College, Honors Research Projects

This paper aims to use photographs throughout several years to observe, examine, and make conclusions on changes occurring at different areas of the Bath Nature Preserve. Throughout the years 2013-2021, photographs have been captured at roughly the same angle at multiple locations in the preserve. These photographs will be placed into a time lapse video and examined to physically see how the environment is changing. Changes to the environment could be natural or as a result of outside factors. By examining these changes, it can be determined if alterations need to be made to help the environment thrive. Two specific …

A Decision Tool To Identify Population Management Strategies For Common Ravens And Other Avian Predators, Andrea F. Currylow, Brenda J. Hanley, Kerry L. Holcomb, Timothy Shields, Stephen Boland, William I. Boarman, Mercy Vaughn

Human–Wildlife Interactions

Some avian species have developed the capacity to leverage resource subsidies associated with human manipulated landscapes to increase population densities in habitats with naturally low carrying capacities. Elevated corvid densities and new territory establishment have led to an unsustainable increase in depredation pressure on sympatric native wildlife prey populations as well as in crop damage. Yet, subsidized predator removal programs aimed at reducing densities are likely most effective longer-term when conducted in tandem with subsidy control, habitat management, and robust assessment monitoring programs. We developed decision support software that leverages stage structured Lefkovitch population matrices to compare and identify treatment …

The Mechanisms And Consequences Of Shrub Encroachment On The Virginia Barrier Islands, Lauren K. Wood

Theses and Dissertations

Shrub encroachment is a global phenomenon driven by direct and indirect anthropogenic influence which alters plant communities and ecosystem function. Many studies have investigated drivers and consequences of woody plant establishment, but mesic landscapes are underrepresented in the literature. My objective was to assess the mechanisms of Morella cerifera encroachment into coastal mesic grassland, the potential for self-reinforcement, and consequences on community composition, nutrients, and landscape productivity. I studied temperature and water microclimate modification by Morella cerifera presence and removal to understand ecosystem engineering and community composition changes. Additionally, I examined the influence of shrubs on surrounding grassland species traits …

Benthic Microalgae Response To A Warming Climate And Shift In Foundational Vegetation Species In A Saltmarsh-Mangrove Ecotone, Gabriela Canas

UNF Graduate Theses and Dissertations

The ecotone in Northeast Florida is experiencing rapid change as mangroves begin to encroach northward into saltmarsh dominated coastal wetlands. This is especially prevalent within the boundaries of the Guana Tolomato Matanzas National Estuarine Research Reserve where studies are attempting to understand the consequences of more mangroves. Although we are beginning to understand some of the implications of this shift in dominant vegetation, the true effects and the accompanying sustained climatic warming effects on the resilience of wetland habitats and their associated communities remains unknown. Primary producers such as benthic microalgae (BMA) are important food sources in both mangrove and …

Introduction To Neutrosophic Genetics, Florentin Smarandache

Branch Mathematics and Statistics Faculty and Staff Publications

Neutrosophic Genetics is the study of genetics using neutrosophic logic, set, probability, statistics, measure and other neutrosophic tools and procedures. In this paper, based on the Neutrosophic Theory of Evolution (that includes degrees of Evolution, Neutrality (or Indeterminacy), and Involution) – as extension of Darwin’s Theory of Evolution, we show the applicability of neutrosophy in genetics, and we present within the frame of neutrosophic genetics the following concepts: neutrosophic mutation, neutrosophic speciation, and neutrosophic coevolution.

Stygobitic Crustaceans In An Anchialine Cave With An Archeological Heritage At Vodeni Rat (Island Of Sveti Klement, Hvar, Croatia), Alessandro Montanari, Nicolas Cerveau, Barbara Fiasca, Jean-François Flot, Diana Galassi, Maurizio Mainiero, David Mcgee, Tadeusz Namiotko, Stefano Recanatini, Fabio Stoch

International Journal of Speleology

A group of four amphoras found in the anchialine cave of Vodeni Rat in the Croatian island of Sveti Klement, on a rocky ledge at 24 m water depth, indicates that a freshwater source was exploited at the bottom of this karstic pit by islanders and/or passing-by sailors from the late Roman Republican Period to the Early Medieval Period. In other words, prior to the 4^th–7^th century CE, Vodeni Rat was not an anchialine cave but a Pleistocene karstic pit with a freshwater pool at the bottom. Seawater started to infiltrate this cavity via newly opened fissures …

Spatio-Temporal Dynamics Of Fungal Communities And Their Effects On Plants, Kel Cook

Biology ETDs

Fungi perform several critical functions in the environment. Spatiotemporal distributions of fungal communities will mediate when and where these functions happen and how they vary across the landscape. I first explored tropical tree canopy fungal community variation at small spatial scales and documented near total turnover of fungi across sub-meter distances and among adjacent substrates. The second chapter analyzed fungal turnover over the course of three years, where community stability was driven primarily by abundant fungi. In the third chapter, I tested effects of the environment, including host plant and habitat, on canopy fungal communities and found only small effects, …

Transgenerational Plasticity Causes Differences In Uv-Tolerance Of Intertidal And Subtidal Populations Of The Purple Sea Urchin, Strongylocentrotus Purpuratus, Yareli Alvarez, Nikki L. Adams

Master's Theses

Planktonic larvae of marine organisms are increasingly being exposed and required to respond to a changing physical environment. Adult sea urchins occupy both intertidal and subtidal waters and broadcast spawn gametes into the water column to contend with variable physical conditions. To answer how populations of invertebrates residing at different depths adequately prepare their offspring to cope with different levels of ultraviolet radiation (UVR), we collected adult purple sea urchins, Strongylocentrotus purpuratus, from four sites (two intertidal and two subtidal (~15 m deep)) on the central coast of CA to compare UV tolerance in offspring. Our measurements of UVA …

Structure And Evolution Of Lizard Immunity Genes, Trent Santonastaso

LSU New Orleans Theses and Dissertations

One of the most important gene families to play a role in adaptive immunity is the major histocompatibility complex (MHC). MHC class II loci are considered to be the most variable loci in the vertebrate genome, and studies have shown that this variability can be maintained through complex co-evolutionary dynamics between host and parasite. Despite the rich body of research into the MHC, there is comparatively little understanding of its genomic architecture in reptiles. Similarly, loci associated with innate immunity have received little attention in reptiles compared to other vertebrates. In the first chapter, we investigated the structure and organization …

Mathematical Modeling For Studying The Sustainability Of Plants Subject To The Stress Of Two Distinct Herbivores, B. Chen-Charpentier, M. C.A. Leite, O. Gaoue, F. B. Agusto

Applications and Applied Mathematics: An International Journal (AAM)

Viability of plants, especially endangered species, are usually affected by multiple stressors, including insects, herbivores, environmental factors and other plant species. We present new mathematical models, based on systems of ordinary differential equations, of two distinct herbivore species feeding (two stressors) on the same plant species. The new feature is the explicit functional form modeling the simultaneous feedback interactions (synergistic or additive or antagonistic) between the three species in the ecosystem. The goal is to investigate whether the coexistence of the plant and both herbivore species is possible (a sustainable system) and under which conditions sustainability is feasible. Our theoretical …

Chronoecology Of A Cave-Dwelling Orb-Weaver Spider, Meta Ovalis (Araneae: Tetragnathidae), Rebecca Steele

Electronic Theses and Dissertations

Circadian clocks enable coordination of essential biological and metabolic processes in relation to the 24-hour light cycle. However, there are many habitats that are not subject to this light cycle, such as the deep sea, arctic regions, and cave systems. This study analyzes the circadian pattern of isolated populations of a subterranean spider, Meta ovalis from two Tennessee caves and five Indiana caves. Locomotor activity was recorded with TriKinetics LAM50 Locomotor Activity Monitor under a 12-hour light (L), 12-hour dark (D) (LD 12:12) cycle preceding total darkness (DD). Significant differences were found within and among populations found in Tennessee cave …

A Basic Ddradseq Two‐Enzyme Protocol Performs Well With Herbarium And Silica‐Dried Tissues Across Four Genera, Ingrid E. Jordon-Thaden, James B. Beck, Catherine A. Rushworth, Michael D. Windham, Nicolas Diaz, Jason T. Cantley, Christopher T. Martine, Carl J. Rothfels

Faculty Journal Articles

Premise

The ability to sequence genome‐scale data from herbarium specimens would allow for the economical development of data sets with broad taxonomic and geographic sampling that would otherwise not be possible. Here, we evaluate the utility of a basic double‐digest restriction site–associated DNA sequencing (ddRADseq) protocol using DNAs from four genera extracted from both silica‐dried and herbarium tissue.

Methods

DNAs from Draba, Boechera, Solidago, and Ilex were processed with a ddRADseq protocol. The effects of DNA degradation, taxon, and specimen age were assessed.

Results

Although taxon, preservation method, and specimen age affected data recovery, large phylogenetically informative …

Checklist Of The Freshwater Sponges (Porifera: Spongillida) Of Tennessee, John E. Copeland

Cumberland Mountain Naturalist

Of the ~8,500 sponge species that are known to exist, approximately 3% inhabit freshwater. Taxonomically, freshwater sponges are divided into 6 families with less than 250 identified species. Of these, 33 species of freshwater sponge can be found in the Nearctic Biogeographical realm with 13 species documented in Tennessee waters. Species of three families, Metanidae, Potamolepidae, and Spongillidae, are known to occur in the United States but only members of Potamolepidae and Spongillidae have been collected from Tennessee waters. This article presents a species checklist with currently known distribution information.

Evolutionary Ecology Of Host-Parasite Relationships: Role Of Host Ecology, Phylogeny, And Demographics In Shaping Parasite Evolution, Erika Taylor Gendron

Biology ETDs

Host-parasite systems exist across complex and ecologically heterogeneous landscapes, and may occur across taxonomically and ecologically disparate host species. Under these conditions, mechanisms underlying microevolutionary processes (i.e. gene flow, genetic drift) are not always clear, and may be mediated by numerous co-occurring factors specific to individual hosts. Host traits such as host immunology, demographics, phylogeny and ecology may act in concert to shape host-parasite relationships, and ultimately evolutionary processes. The research described herein used phylogeographic, phylogenomic, and population genetic methods to further understanding of how host traits impact the evolutionary ecology of trematode systems, using avian schistosomes (Digenea: Schistosomatidae) as …

Driver Of Avian Haemosporidian Diversity And Host Specificity In The Solomon Islands, Xena Marie Mapel

Biology ETDs

Avian haemosporidians are protist parasites that are distributed worldwide. We investigated these parasites in a tropical South Pacific archipelago to answer two questions: 1) Which community characteristics influence haemosporidian diversity; 2) Does host specificity vary across islands? To answer these questions we sequenced a mitochondrial gene and created linear models to establish relationships between select variables and diversity. In addition, we calculated host breadth of each lineage and constructed models to infer predictors of diversity. The percent of infected individuals on each island was correlated with island area. Haemosporidian phylogenetic diversity on a given island was associated with the proportion …

The Bioethical Significance Of “The Origin Of Man’S Ethical Behavior” (October 1941, Unpublished) By Ernest Everett Just And Hedwig Anna Schnetzler Just, Theodore Walker Jr.

Journal of the South Carolina Academy of Science

Abstract –

E. E. Just (1883-1941) is an acknowledged “pioneer” in cell biology, and he is perhaps the pioneer in study of egg cell fertilization. Here we discover that Just also made pioneering contributions to general biology and evolutionary bioethics.

Within Just’s published contributions to observational cell biology, there are substantial fragments of his theory of ethical behavior, a theory with roots in cell biology. In addition to such previously available fragments, Just’s fully developed theory is now available. This recently discovered unpublished book-length manuscript argues for the biological origins of ethical behavior (evolving from cells to humans, within a …

The Undergraduate Student’S Guide To Geometric Morphometrics, Erika Crispo

Open Educational Resources

Embarking on a new research endeavor can be a daunting task. User guides, books, and published articles are written for an audience that already has some background experience in the field. Undergraduate students like you, who are at the very beginning of their research careers, often struggle to make sense of these documents. Furthermore, students like you often attempt to do so while balancing heavy course loads. Thus, I have written this document to help ease the burden so that you have more time to ponder the interesting scientific questions instead of digging through pages upon pages of documentation. I …

Impact Of Nacl Tolerance On The Stress Physiology And Fitness Of Larval Wood Frogs (Rana Sylvatica), Grascen Shidemantle, Nicholas Buss, Jessica Hua

Biological Sciences Student Scholarship

No abstract provided.

Rodent Seed Preference Trials Of Ecologically Important Plants In Kentucky, Katelyn Thomason

Mahurin Honors College Capstone Experience/Thesis Projects

Seed predation is an important ecological process that can affect the success of individual plants and plant populations as a whole. However, seed preferences of herbivores have received little detailed attention in comparison to seedling predation studies (Hulme, 1994). In this project I researched how rodents, specifically their seed preferences, affect the recruitment and survival of ecologically important native plants in Western Kentucky. I used traps to catch Peromyscus leucopus (white-footed mice). Once caught, each mouse was placed in a trial arena with seeds from Silphium perfoliatum (cup plant), Baptisia australis (blue false indigo), Silphium lanciniatum (compass plant), and the …

Morphological Correlates Of Auditory Sensitivity In The Inner Ear Of Two Species Of Invasive Carp, Tyler Patty

Mahurin Honors College Capstone Experience/Thesis Projects

Silver (Hypopthalmichthys molitrix) and bighead (H. nobilis) carp, are invasive species that have negative impacts upon ecosystems. H. molitrix is known to jump completely out of the water in response to broadband sounds, however, this is not observed in H. nobilis. Preliminary experiments reveal that sounds can be used to modify the behavior of carps. Thus, understanding the hearing abilities of these species is important in order to design appropriate acoustical deterrents. Fish heads were preserved in 4% paraformaldehyde and the inner ears dissected and photographed under a light microscope in order to describe the …