Ecology and Evolutionary Biology Commons^™

Don Griffin And The Early Days Of Cognitive Ethology, Gordon M. Burghardt

Animal Sentience

Carolyn Ristau’s trilogy provides a comprehensive account of Donald Griffin’s life and work, with the third volume focusing on cognitive ethology. This commentary focuses primarily on my own interactions with Don, particularly during my sabbatical at Rockefeller University when his campaign for cognitive ethology was gaining momentum. I recount my research on reptile behavior and cognition, my collaboration with Don and others at RU, and my role in advancing his ideas while contextualizing them within 19th-century comparative psychology. I also discuss developments in cognitive ethology, including critical anthropomorphism, the challenges of integrating subjective experience into behavioral science, and Griffin’s lasting …

Other Perspectives On Animals, Their Sentience And Cognition, Joyce M. D'Silva Mrs

Animal Sentience

For those of us who work to achieve legal recognition that animals are sentient beings, and should in many cases be allotted personhood, Donald Griffin is indeed an inspiration and a true game-changer. He put paid to the narrow behaviourist interpretation of animals’ lives promoted by Skinner et al. He became a real heir to Darwin’s belief in animal emotions. He enabled campaigners for animal welfare and indeed animal rights to quote his work as a distinguished scientist to give gravitas to their calls for legal recognition and protection of animals.

An Individuals-Oriented Approach To Conservation, Kristy M. Ferraro

Animal Sentience

Individual cognitive and emotional differences in personality among animals, along with differences in their behavioral traits, are increasingly important in conservation efforts. It is not only more effective but more ethical to take both collective and individual perspectives into account in both research and practice.

Wildlife Conservation And Adaptation To Humans, Valeria Mazza Phd, Claudio Carere

Animal Sentience

For many animal species, the ability to adapt to coexistence with the human species and to the environmental changes that humans cause is a biological imperative. This adaptive capacity varies not only between species, but within species. Studying individual differences in animals’ behavioral, cognitive and physiological adaptability is important for integrating ethology and conservation. Findings about animal cognitive capacities, including learning, need to be applied in conservation—but humans need to be educated about ethology, coexistence and conservation too.

Evaluation Of The Impact Of Urban Stream Syndrome On Macroinvertebrate Functional Feeding Diversity And Organic Matter Processing In Streams, Helena Loucas

Longwood Senior Thesis Proposal

The relationship between macroinvertebrate functional diversity and environmental processes is connected in streams. Aquatic macroinvertebrates are specialized feeders, falling into five functional feeding groups which affect processes such as the decomposition of organic matter. Urbanization causes the degradation of streams in a process is known as the Urban Stream Syndrome, and can result in increased concentrations of contaminants, altered stream morphology, and reduced taxonomic richness. The reduction of taxonomic richness increases the abundance of tolerant species, altering functional feeding groups, which will affect ecosystem processes within the stream. My proposed study seeks to determine the effects of urbanization on ecosystem …

When And Where Can Coastal Wetland Restoration Increase Carbon Sequestration As A Natural Climate Solution, Scott F. Jones, Ariane Arias-Ortiz, Dennis Baldocchi, Meagan Eagle, Daniel A. Friess, Catrina Gore, Greg Noe, Stefanie Nolte, Patty Oikawa, Adina Paytan, Jacqueline L. Raw, Brian J. Roberts, Kerrylee Rogers, Charles Schutte, Camille L. Stagg, Karen M. Thorne, Eric J. Ward, Lisamarie Windham-Myers, Erik S. Yando

Biological Sciences Faculty Publications

Coastal wetlands are hotspots of carbon sequestration, and their conservation and restoration can help to mitigate climate change. However, there remains uncertainty on when and where coastal wetland restoration can most effectively act as natural climate solutions (NCS). Here, we synthesize current understanding to illustrate the requirements for coastal wetland restoration to benefit climate, and discuss potential paths forward that address key uncertainties impeding implementation. To be effective as NCS, coastal wetland restoration projects will accrue climate cooling benefits that would not occur without management action (additionality), will be implementable (feasibility) and will persist over management-relevant timeframes (permanence). Several issues …

Cyp6g2 Is The Major P450 Epoxidase Responsible For Juvenile Hormone Biosynthesis In Drosophila Melanogaster, Qiangqiang Jia, Liu Yang, Jiamin Wen, Suning Liu, Di Wen, Wei Luo, Weihua Wang, Subba R. Palli, Li Sheng

Entomology Faculty Publications

Background Juvenile hormones (JH) play crucial role in regulating development and reproduction in insects. The most common form of JH is JH III, derived from MF through epoxidation by CYP15 enzymes. However, in the higher dipterans, such as the fruitfly, Drosophila melanogaster, a bis-epoxide form of JHB3, accounted most of the JH detected. Moreover, these higher dipterans have lost the CYP15 gene from their genomes. As a result, the identity of the P450 epoxidase in the JH biosynthesis pathway in higher dipterans remains unknown.

Results In this study, we show that Cyp6g2 serves as the major JH epoxidase responsible for …

Go West: Population Genomics Reveals Unexpected Population Fluctuations And Little Gene Flow In Western Hemisphere Populations Of The Predatory Lady Beetle, Hippodamia Convergens, Arun Sethuraman, Schyler O. Nunziata, Angela Jones, John J. Obrycki, David W. Weisrock

Entomology Faculty Publications

Hippodamia convergens—the convergent lady beetle, has been used extensively in aug- mentative biological control of aphids, thrips, and whiteflies across its native range in North America, and was introduced into South America in the 1950s. Overwintering H. convergens populations from its native western range in the United States are com- mercially collected and released across its current range in the eastern USA, with little knowledge of the effectiveness of its augmentative biological control. Here we use a novel ddRADseq-based SNP/haplotype discovery approach to estimate its range- wide population diversity, differentiation, and recent evolutionary history. Our results indicate (1) significant population …

The Mechanoreceptor Piezo Is Required For Spermatogenesis In Bombyx Mori, Zhongjie Zhang, Xiaojing Liu, Bo Hu, Kai Chen, Ye Yu, Chenxin Sun, Dalin Zhu, Hua Bai, Subba Reddy Palli, Anjiang Tan

Entomology Faculty Publications

Background The animal sperm shows high diversity in morphology, components, and motility. In the lepidopteran model insect, the silkworm Bombyx mori, two types of sperm, including nucleate fertile eupyrene sperm and anucleate unfertile apyrene sperm, are generated. Apyrene sperm assists fertilization by facilitating the migration of eupyrene spermatozoa from the bursa copulatrix to the spermatheca. During spermatogenesis, eupyrene sperm bundles extrude the cytoplasm by peristaltic squeezing, while the nuclei of the apyrene sperm bundles are discarded with the same process, forming matured sperm.

Results In this study, we describe that a mechanoreceptor BmPiezo, the sole Piezo ortholog in B. mori, …

Informing Standardized Wood Turtle (Glyptemys Insculpta) Population Monitoring: Influences Of Sampling Approach And Turtle Behavior On Model Estimation, Allyson N. Beard

Graduate Theses, Dissertations, and Problem Reports (ETD)

To better understand wood turtle (Glyptemys insculpta) population trends, two standardized population survey protocols were recently developed for use by state monitoring programs. The protocols were independently developed, tested, and deployed for population monitoring in the eastern and upper midwestern United States. It was unknown if the sampling designs result in similar detection success or if data from the two protocols are compatible for broad-scale analyses. Additionally, neither monitoring protocol includes a sampling design that allows for the separation of detection (p) into availability (p_a), and detection given availability (p_d). …

Comparing The Prevalence Of Stereotypic Behaviors And Enrichment Use In Rhesus (Macaca Mulatta) And Japanese Macaques (M. Fuscata), Jesscia Oscavich

All Master's Theses

To improve captive nonhuman primates’ welfare, particularly those utilized in biomedical and behavioral research, it’s important to understand their behavior. Rhesus (Macaca mulatta) and Japanese macaques (M. fuscata) are two closely related species that are commonly utilized in biomedical and behavioral research. In this study, I compared the frequency of stereotypic behaviors, which are abnormal repetitive behaviors that are apparently non-functional, and enrichment use among four groups of each species. Stereotypic behaviors were divided into motor, which the animal performed while active, and self-directed stereotypies, which the animal performed towards themselves. Enrichment use was divided into …

The Genetic Diversity Of An Endangered Buttercup, Ranunculus Triternatus, Ryan Garcia

All Master's Theses

Ranunculus triternatus, a rare endemic species of the Columbia River Gorge, faces conservation challenges due to its limited range and fragmented populations. This study assesses the genetic diversity of R. triternatus and compares it with its widespread congener, Ranunculus glaberrimus, using inter-primer binding site (iPBS) markers. Genetic data from 80 individuals across eight populations were analyzed using Nei’s genetic diversity, Shannon’s diversity index, and AMOVA. Results showed R. triternatus had higher genetic diversity than western populations of R. glaberrimus, with eastern populations of R. glaberrimus displaying greater diversity than western ones. PCA, UPGMA, and STRUCTURE analysis revealed …

Long Term Trends In Mortality Rates Of A Smallmouth Bass Population, Caleb D. Anderson

Journal of Earth and Life Science

Smallmouth bass Micropterus dolomieu are known as a popular sport fish for anglers. When a known smallmouth bass fishery appears to have a dwindling population, it raises questions about the population health. A common indicator of the health of the population is the mortality rate. By comparing mortality, conclusions can be made on whether smallmouth bass are dying at a different rate in the system over time. Therefore, the objective of this study was to see if there had been a significant change in smallmouth bass mortality over a span of thirty years in Round Lake (DOW:010204), Aitkin County, Minnesota. …

Relationship Between Northern Pike And Walleye Cpue In Minnesota Lakes, Simon Oslund

Journal of Earth and Life Science

Northern pike Esox lucius and walleye Sander vitreus are both top predators in freshwater systems. Due to their predatorial nature, high populations of one species can prohibit populations of the other species from thriving, specifically northern pike foraging on walleye. This information is tracked by the Minnesota Department of Natural Resources through catch per unit effort (CPUE). CPUE data was gathered for all lakes in Beltrami County, Minnesota, and a regression analysis was done to test for a relationship between pike and walleye. It was found that the relationship between northern pike and walleye CPUE was significant (P = 0.02). …

The Effects Of Length, Weight, Age, And Gender On Mercury Concentrations In Burbot In North-Central Minnesota Lakes, Liam Hanley

Journal of Earth and Life Science

Burbot Lota lota in north-central Minnesota lakes have the potential to reach large sizes and consume large volumes of prey. This caveat may make burbot susceptible to higher rates of biocontamination, bioaccumulation and biomagnification. The objective of this study was to determine how changes in age, length, gender, weight, and lake affect total mercury concentrations in burbot. In this experiment 28 burbot were angled from three lakes: Cass (n = 17), Winnibigoshish (n = 4), and Bad Medicine (n = 7). Then tissue samples were taken from each fish and were lyophilized and homogenized. Homogenized tissue samples were analyzed by …

Relationship Between Fishing Hours And Number Of Fish Harvested From Upper Red Lake, Dylan Ohlenkamp

Journal of Earth and Life Science

Total hours fishermen spend fishing and total amount of fish harvested per year are some of the most important pieces of knowledge gained from creel surveys. They provide crucial information that assesses fisheries mortality and pressure. MN DNR uses their results from creel surveys to improve or impose regulations, and to maintain healthy fisheries. Based on results from similar studies, there is expected to be a positive relationship between hours fished and fish harvested. To determine the relationship between these two variables on Upper Red Lake, data from two years were selected when the variables were at their highest and …

A Guide To Otoliths Of Minnesota Fishes, Baylor J. Short

Journal of Earth and Life Science

Investigations into the diet patterns of piscivores can provide crucial information on predator-prey relationships, population dynamics, and responses to changing ecosystems. However, digestive processes often remove or alter physical characteristics that are traditionally used to identify consumed fish. This problem has been addressed to some degree with advances in molecular technologies, although these methods can be costly and require specific training and equipment to do so. In contrast, bony structures such as otoliths, vertebrae, cleithra, and others frequently have morphologies that are unique among families, genera, and species. Because these structures are resistant to digestion, they can be used to …

The Effect Of Triaenophorus Crassus On The Condition Of Coregonus Artedi, Alexander Surma

Journal of Earth and Life Science

Cisco Coregonus artedi is, historically, the largest commercial fishery in the Great Lakes. The species is also important to commercial and recreational fisheries in inland lakes. Tapeworm Triaenophorus crassus larvae embed themselves into the flesh of Ciscoes, rendering the fish unmarketable to humans. Triaenophorus crassus is common in inland waters such as Leech Lake and Cass Lake, MN. One Canadian researcher has suggested that the parasite negatively affects the growth and weight of Ciscoes. Poor condition can reduce fecundity, leading to lower recruitment rates. This would mean a detrimental impact on not only individual fish, but the health of …

Quantifying The Ecological Effects Of Salix Fragilis On Riparian Habitat In Kittitas County, Washington, Landon Shaffer

All Master's Theses

Invasive species threaten plant community structure and function globally. Riparian areas, the zone near streams where water influences vegetation, are especially sensitive to invasive species colonization, suffering large-scale shifts in community composition. Salix fragilis (crack willow) is a nonnative riparian species abundant in the lower elevation tributaries of central Washington. Some speculate whether this willow should be listed as invasive in Washington, despite a lack of regional supporting evidence. I studied riparian communities dominated by either S. fragilis or native species in the Kittitas Valley and measured biodiversity, quantified differences in solar attenuation, and compared leaf decomposition rates to learn …

Using Novel And Traditional Survey Techniques To Monitor Small Mammal Species In Northwestern California, Sydney Mccluskey

Cal Poly Humboldt theses and projects

Small mammal species play a critical role in forest ecosystems contributing significantly to overall forest biodiversity and ecological dynamics. Forest-dwelling species are among the most vulnerable to habitat loss and fragmentation. It is essential to develop efficient techniques for monitoring small mammal populations in forested ecosystems to inform conservation efforts and management plans; yet, monitoring small mammals in these habitats can be particularly challenging due to their size, activity patterns, and frequently nocturnal nature. In this study, I aimed to address two primary research objectives: 1) compare the effectiveness of 3 distinct camera-trap survey techniques (i.e., ground, tree, and tube) …

Assessing The Effects Of Remaining Northern California Kelp Forest Mesopredators On Purple Sea Urchin Abundance, Distribution, And Feeding Activity, Sandra E. Traverso

Cal Poly Humboldt theses and projects

Kelp forests are threatened by regional abiotic and biotic stressors, including overgrazing by sea urchins. On the north coast of California, purple sea urchins (Strongylocentrotus purpuratus) are prolific grazers of kelp and with the regional extinction of their main predator (sunflower stars, Pycnopodia helianthoides), it is unknown whether any remaining mesopredators could exert top-down control of purple urchin populations. Other known predators of purple urchins in northern California include rock crabs, which have been shown to control sea urchin populations in Atlantic urchin barrens and indirectly cause phase shifts back to kelp forests. Yet, little is known …

A Case Of Incipient Budding Speciation In The California Floristic Province, Infraspecific Divergence In Abronia Villosa, Eli J. Allen

Cal Poly Humboldt theses and projects

Physical barriers to gene flow are the traditional evidence for species divergence. Conversely, there has been increasing acknowledgment of speciation in the face of gene flow as an evolutionary process. Budding speciation involves peripheral populations adapting to local ecological conditions, thereby budding off from a widespread progenitor species. Budding speciation is distinguished by ecological divergence and is generally evidenced by asymmetrical range size and nested phylogenetic relationships of sister species. The narrow endemic Abronia villosa var. aurita is adapted to montane sandy washes adjacent to its widespread sister variety, the desert dwelling var. villosa. Here, I tested the hypothesis …

The Effects Of Scour And Marginal Inundation On Trinity River Invertebrate Biomass And Density With Potential Implications For Juvenile Salmonid Food Resources, Benjamin King

Cal Poly Humboldt theses and projects

Regulated flow releases on the Trinity River in northern California have shifted the timing of high flows from winter to late spring and reduced their magnitude. The timing and extent of scour from high flow events and the timing and duration of marginal (bankside) habitat inundation has shifted as a result. Literature is sparse regarding the effects of these hydrologic alterations on Trinity River benthic macroinvertebrate (BMI) communities, an important food resource for juvenile salmonids. In the 2023 water year, a wet winter coupled with additional flow releases from Lewiston Dam provided the opportunity to analyze the impact of scour …

Trophic Interactions Of Sympatric Cyprinodontiform Fishes Inhabiting Louisiana Saltmarshes, Ryan Heines

Dissertations, Master's Theses and Master's Reports

Resident saltmarsh nekton, namely Cyprinodontiform fishes, play key ecological roles in supporting terrestrial and aquatic food webs. These fishes are highly abundant across the saltmarsh landscape of coastal Louisiana and have evolved to tolerate the highly variable environmental conditions that are characteristic of these habitats. The objective of this research is to consider mechanisms enabling this diverse community of fishes to cooccur in the spatially limited saltmarsh habitats of coastal Louisiana. In Chapter 2, bulk stable isotope ratios of carbon (δ13C), sulfur (δ34S) and nitrogen (δ15N) were used to quantify the intra- and inter-specific resource use of six sympatric Cyprinodontiform …

Investigation Of L-Serine Synthesis And Transport As Stabilizing Feedback Mechanisms Within The Tsetse-Wigglesworthia Symbiosis, Ryan Phillips

Graduate Theses, Dissertations, and Problem Reports (ETD)

Tsetse flies (Glossina morsitans), which are the obligate vectors of Old-World trypanosomes (Trypanosoma spp.) that cause African trypanosomiasis, have a bacteriome that houses the intracellular endosymbiont Wigglesworthia glossinidia. The ancient coevolution of these species has led to the integration of Wigglesworthia metabolism into tsetse physiology and a subsequent reliance on nutrient exchange for maintaining the fitness of both partners. The establishment of this obligate mutualism has facilitated the emergence of feedback mechanisms that stabilize the symbiosis, such as that which involves the exchange of L-serine and B vitamins. The Gammaproteobacteria Wigglesworthia supplement B vitamins lacking …

Maximum Entropy Species Distribution Modeling For The Spring Ephemeral Herb Bloodroot (Sanguinaria Canadensis) In Eastern North America, Velan Manivannan

Williams Honors College, Honors Research Projects

The spring ephemeral plant Bloodroot (Sanguinaria canadensis) has a widespread native range in North America, spanning much of the eastern United States and Canada. While its current NatureServe conservation status is designated as ‘secure’ (NatureServe, 2023), its status as a spring ephemeral places it at a heightened risk for climate change-induced phenological mismatch with advancing forest canopy closure. Additionally, under continued anthropogenic climate change, Bloodroot may also experience range shifts or contractions as the edges of its present range warm past physiological thresholds. To determine the potential for range shifts and contractions under future warming, I generated a …

The Influence Of Genes On The Migratory Timing Of Great Reed Warblers, Emily Fackler

Honors Undergraduate Theses

Many organisms migrate; however, there is a lack of knowledge on the mechanisms that drive migration timing, including which genes play a role. The great reed warbler (Acrocephalus arundinaceus), a migratory bird that breeds in Eurasia and overwinters in sub-Saharan Africa, is an excellent model to study the genetics of migration. Each season, some individuals migrate early, whereas others migrate later in the season. In other words, they exhibit differences in their migratory chronotypes. Past research has identified three candidate genes (TOP1, PEAK1, and CPNE4) that influence the migratory chronotypes of another avian species, …

The Sources And Fates Of Nutrients In The Deep Lake Watershed, Kiler Austin Kenison

EWU Masters Thesis Collection

This water quality survey determined the sources and fates of nutrients within the Deep Lake watershed located in Stevens County, WA. Deep Lake is a 191-acre exorheic lake found just below the Canadian border in northeast Washington state. It is situated at the bottom of a narrow valley with steep walls and is fed throughout the year by snowmelt from tributaries descending the mountains surrounding it. Above and to the north of the lake, the tributaries are utilized by cattle ranchers as a water source for livestock while a small community of homes surrounds the lake. Water samples, discharge, and …

Monitoring Faunal Responses To Biodegradable Oyster Reef Restoration Materials With Camera Traps, Tara L. Blanchard

Honors Undergraduate Theses

Restoration of the oyster reefs has become increasingly crucial due to great population declines around the globe. Intertidal oyster reefs provide essential foraging and loafing grounds to many faunal species, including several threatened/endangered wading bird species. Biodegradable oyster reef restoration materials have been introduced to avoid potential plastic pollution from traditional materials. Studies have shown success regarding oyster recruitment rates to these materials. However, their impacts on fauna using restored oyster reefs are unknown. This project aims to evaluate oyster reef restoration using biodegradable materials to increase faunal diversity, abundance, and foraging behaviors. Camera traps were deployed to observe fauna …

Examining Wrack In Mosquito Lagoon To Analyze Biodiversity And Seagrass Viability, Nicole Jerrell

Honors Undergraduate Theses

Seagrass restoration of Halodule wrightii, has become crucial as seagrass coverage in the Indian River Lagoon (IRL) declined by 58% between 2011 and 2019. To understand the abundance of seagrass fragments available for natural recruitment and restoration, we tracked the abundance of viable fragments found in the wrack in Mosquito Lagoon. Wrack is plant material, including seagrass fragments, mangrove propagules, and detritus. Seagrass fragments were considered viable if the fragment had an apical meristem present. Replicate samples were collected from 5 locations every two weeks, starting in September 2022 and ending in September 2023, and the samples were processed …