Ecology and Evolutionary Biology Commons^™

The Host Gatekeeper: Using The Flagellar Pathway To Understand Symbiont Host Adaptation, Adam R. Pollio

Graduate Theses, Dissertations, and Problem Reports (ETD)

The acquisition of microbial partners is a strategy used by a diverse group of arthropods to overcome ecological barriers that might normally make certain niches uninhabitable. The unique phylogenetic opportunities attainable from the natural experiment of the Sodalis-allied clade allow for better understanding of how molecular structures evolve through time. Here, we focus on the evolution of the flagellar synthesis pathway, due to its complexity and ability to diverge in response to ecological pressures. We used this molecular pathway and natural experiment to show that normal evolutionary outcomes associated with symbiosis (i.e., genome reduction) do not explain the predicted conservation …

Habitat Stability In Appalachian Headwater Systems And Potential Impacts On Brook Trout Populations, Zac F.W Zacavish

Graduate Theses, Dissertations, and Problem Reports (ETD)

The impact climate change will have on the habitat for Brook Trout (Salvelinus fontinalis) could directly impact key demographic characteristics. Traditionally, broad-scale studies of climate change effects on the family Salmonidae focus on the thermal shifts predicted over the next century. While some studies shed light onto other variables such as biotic interactions, flow regime, and disturbance, the significance of the climate-trout interaction is not always observed. With the high degree of influence climate cycles can have on habitat and channel morphology, this study aimed to highlight temporal habitat shifts to begin addressing climate-habitat interaction. By studying habitat distribution …

Trees, Fungi, Insects: How Host Plant Genetics Builds A Community, Sandra Jeanne Simon

Graduate Theses, Dissertations, and Problem Reports (ETD)

Organisms, such as fungi and insects, can cause millions of acres of agricultural and forest damage, while others provide billions of dollars in ecological services such as education, aesthetic enjoyment, pollination, and gardening. Plant breeding and biotechnology can potentially help establish a balance between the proliferation of detrimental pests and attraction of beneficial insects. Variation in plant physiological and morphological characteristics are extremely important in the ability of host tissues to support many different types of organisms. When that variation is genetically heritable in a plant population, shifts in the underlying genes can have predictable consequences in structuring entire ecosystems. …

Nitrogen Fertilization Decouples Roots And Microbes In Temperate Forests: Impacts On Soil Carbon And Nitrogen Cycling, Joseph E. Carrara

Graduate Theses, Dissertations, and Problem Reports (ETD)

Since the start of the industrial revolution the burning of fossil fuels has resulted in enhanced nitrogen (N) inputs into temperate forests through atmospheric deposition. As N is the limiting nutrient for tree growth across most forests, these inputs have generally enhanced above-ground biomass accumulation. However, the impacts of added N on soil carbon storage (C) are less straightforward. While the mean N response across studies is an enhancement of soil C, these results are variable with some studies reporting net C losses. The classic paradigm posits that N enhances soil C through negative effects on fungal decomposers. However, some …

Effects Of The Asian Clam, Corbicula Fluminea, On Native Freshwater Mussels And Biofilms, Kiersten Youngquist

Murray State Theses and Dissertations

As native, freshwater mussels continue to decline in the United States, successful conservation and management plans are essential for their survival. Understanding the drivers of native mussel declines, how the ecological roles mussels play within aquatic systems may be affected by declines, and the conservation status of our mussel fauna in different watersheds is critical to inform management and conservation efforts. The Asian clam (Corbicula fluminea, Müller, 1774) is an invasive species found throughout the United States that can reach densities of greater than 1000/m². Given these high densities, Asian clams have been linked to declines in native mussels …

Developmental Mechanisms For The Diversification Of Polyphenic Morphs In The Head Horn Of Onthophagine Beetles (Coleoptera: Scarabaeidae Onthophagus Taurus): Plasticity Through Nutrition, Logan Paul Zeigler

Graduate Theses, Dissertations, and Problem Reports (ETD)

Developmental plasticity is the phenotypic variation between organisms that is caused by environmental interactions affecting the developmental systems of organisms. The research focused primarily on nutrition-responsive developmental plasticity. In this research we used the nutritionally determined head horn development of Onthophagus taurus to better understand the developmental mechanisms and genetic underpinnings of nutrition-responsive trait development. We focused specifically on altering the availability of specific nutrition-related primary metabolites, cholesterol and palmitic acid, identified in the activity of The Hedgehog pathway, a critical pathway in head horn development. By altering diet composition using cholesterol, reducing transcript expression of an acyltransferase gene, rasp …

Leaf Angle And Leaf Stomata Responses To Experimental Drought In Quercus Velutina And Acer Saccharum, Brittany Nichole Casey

Graduate Theses, Dissertations, and Problem Reports (ETD)

The possibility of increased severity and frequency of drought conditions, as a result of global climate variability, greatly complicates our ability to forecast future forest functions such as productivity and carbon sequestration. Assessing how tree species vary in their response to drought can aid in predicting the impact on forest ecosystems as a whole. Throughfall exclusion (TfE) experiments are potentially useful tools to simulate realistic drought conditions within intact forest ecosystems. We employed a TfE experiment during the 2018 growing season within the WV Land Trust’s Elizabeth’s Woods Nature Preserve, near Morgantown, WV, to assess the leaf angle and leaf …

Conospermum Undulatum: Insights Into Population Genetics And Pollination Ecology Of A Threatened Species, Nicola Delnevo

Theses: Doctorates and Masters

Fragmentation of natural vegetation is currently one of the largest threats to biodiversity. Within the southwest Australia global biodiversity hotspot, the Swan Coastal Plain was historically cleared for agriculture and forestry and is now experiencing extensive land clearing for urbanisation. The wavy-leaved smokebush Conospermum undulatum is a rare species endemic to the Swan Coastal Plain, and its future persistence is threatened by urban expansion.

Throughout this research, I investigated the pollination ecology of this species and found a specific association between C. undulatum and native bees for pollination. I also demonstrated that C. undulatum has evolved pollen with resistance to …

Determination Of Iron-Reducing Bacterial Activities In Lake Sediments., Alexandra Kahn

Williams Honors College, Honors Research Projects

Algal blooms are growing rampantly in lacustrine systems due to an increase of phosphorus, a nutrient for algae. Phosphorus is being released into the environment causing overpopulation and eutrophication which damages the ecosystem. The availability of phosphorus is affected by the solubility of iron which is regulated through iron reducing and iron oxidizing bacteria. Phosphorus adheres to insoluble Fe(III), which prohibits algae from utilizing it, while phosphorus does not attach to soluble Fe(II) and therefore it remains available to algae. The purpose of this study was to determine how bacteria influence iron solubility and what are the ideal environmental conditions …

Are There Ecomorphologically-Related Differences In The Adhesive Setae Of Jamaican Anolis Lizards?, Caitlin Wright

Williams Honors College, Honors Research Projects

Anolis lizards are best known for their ability to adhere to surfaces with the use of their adhesive toe pads. Different ecomorphs of anoles exist which co-vary with habitat type, a concept known as ecomorphology. The ecomorphology of anoles has been well studied, however little is known about the differences that may exist within the adhesive toe pads of different anole species. In this project, differences within adhesive microstructures of five different species of Jamaican anoles was examined. Scanning electron microscopy (SEM) will be used to produce images of the adhesive structures in which a variety of morphological measurements were …

Timing And Extent Of Crop Damage By Wild Pigs (Sus Scrofa Linnaeus) To Corn And Peanut Fields, C. M. Boyce, Kurt C. Vercauteren, James C. Beasley

United States Department of Agriculture Wildlife Services: Staff Publications

The global expansion of wild pigs over the last few decades has resulted in an increase in extent and distribution of damages to crops, placing a growing strain on agricultural producers and land managers. Despite the extent of wild pig damage to agriculture, there is little data regarding timing and spatial variability of damage to corn (Zea mays Linnaeus) and we found no data regarding the effect of these factors on peanuts (Arachis hypogaea Linnaeus). Our objective was to determine the timing and extent of wild pig damage to corn and peanut fields, as well as the extent …

Validation Of A Screening Method For The Detection Of Colistin-Resistant E. Coli Containing Mcr-1 In Feral Swine Feces, Jeffrey C. Chandler, Alan B. Franklin, S. N. Bevins, Kevin T. Bentler, Jonas Bonnedahl, Christina A. Ahlstrom, Bledar Bisha, Susan A. Shriner

United States Department of Agriculture Wildlife Services: Staff Publications

A method was developed and validated for the detection of colistin-resistant Escherichia coli containing mcr-1 in the feces of feral swine. Following optimization of an enrichment method using EC broth supplemented with colistin (1 μg/mL) and vancomycin (8 μg/mL), aliquots derived from 100 feral swine fecal samples were spiked with of one of five different mcr-1 positive E. coli strains (between 10⁰ and 10⁴ CFU/g), for a total of 1110 samples tested. Enrichments were then screened using a simple boil-prep and a previously developed real-time PCR assay for mcr-1 detection. The sensitivity of the method was determined in …

Cattle Egrets Regurgitate House Mouse Carcasses Onto A Mouse-Free Island: Implications For Rodent Eradications, Aaron B. Shiels, Mele Khalsa, Doreen L. Griffin, Clay K. Chow, Sheri S. Mann, Antoinette J. Piaggio

United States Department of Agriculture Wildlife Services: Staff Publications

Context. Eradication of invasive rodents on islands typically results in positive conservation gains, and maintaining a rodent-free island requires elevated biosecurity, including prevention of assisted rodent arrival via watercraft, aircraft and animals such as birds. Cattle egrets (Bubulcus ibis) are widespread, and often fly several kilometres daily to roost and forage. They frequently swallow insects and vertebrates (including rodents) whole, and some regurgitate prey. Cattle egrets have been regularly observed flying between the Hawaiian Islands of Ni’ihau (where non-native mice and rats are established) and Lehua (where one species of non-native rat is established and was targeted during …

Competing Reproductive And Physiological Investments In An All‑Female Lizard, The Colorado Checkered Whiptail, Lise M. Aubry, Spencer B. Hudson, Bryan M. Kluever, Alison C. Webb, Susannah S. French

United States Department of Agriculture Wildlife Services: Staff Publications

Organisms in the wild have to allocate limited resources towards competing functions such as reproduction, growth, and self-maintenance. These competing investments create significant changes in physiological activity, and we still know little about the relationship between physiological activity and reproductive investment in natura. We investigated trade-offs between physiological activity and reproductive investment in the parthenogenetic Colorado checkered whiptail, Aspidoscelis neotesselata, across three different sites at the US Army Fort Carson Military Installation near Colorado Springs, CO, through-out the reproductive season in 2018 and 2019. We measured clutch size and reproductive activity and quantified plasma corticosterone (CORT), reactive oxygen metabolites (ROMs), …

Monk Parakeet (Myiopsitta Monarchus Boddaert, 1783), Michael L. Avery

United States Department of Agriculture Wildlife Services: Staff Publications

Common Names: Monk Parakeet, Quaker Parakeet, Quaker Parrot, Quaker Conure, Grey-headed Parakeet

The natural distribution of the Monk Parakeet (Myiopsitta monachus Boddaert, 1783) extends from southern Bolivia, through Paraguay, southern Brazil and Uruguay to southern Argentina (Fig. 10.1 ). It is documented as invasive in a range of countries, and of these, there are at least 17 countries where they are breeding in the wild, as detailed below. ...

The Monk Parakeet is among the most successful invasive bird species in the world. Unlike many other invasive birds, such as the Ring-necked Parakeet (Psittacula krameri) and the …

Movement Behavior Of Radio-Tagged European Starlings In Urban, Rural, And Exurban Landscapes, Page E. Klug, H. Jeffrey Homan

United States Department of Agriculture Wildlife Services: Staff Publications

Since their intentional introduction into the United States in the 1800s, European starlings (Sturnus vulgaris) have become the fourth most common bird species and a nuisance bird pest in both urban and rural areas. Managers require better information about starling movement and habit-use patterns to effectively manage starling populations and the damage they cause. Thus, we revisited 6 radio-telemetry studies conducted during fall or winter between 2005 and 2010 to compare starling movements (n = 63 birds) and habitat use in 3 landscapes. Switching of roosting and foraging sites in habitat-sparse rural landscapes caused daytime (0900–1500 hours) …

Serum Chemistry Values In Wild Black Vultures In Mississippi, Usa, Fred L. Cunningham, Sherman W. Jack, Amanda R. Deese, Eric R. Wengert, Kyle Van Why, Carla L. Huston, Scott Lemmons, Richard B. Minnis

United States Department of Agriculture Wildlife Services: Staff Publications

Vultures (Cathartidae and Accipitridae) play an important role in ecosystem balance by rapidly disposing animal carcasses and thus preventing the potential spread of pathogens. Blood chemistry values provide a means of assessing the health of wildlife and wild animal populations; however, there are significant differences in chemistries among species and when comparing captive and free-living New and Old World vultures. In 2007, we collected blood serum from 30 female and 14 male wild, healthy black vultures (Coragyps atratus) live-trapped by the U.S. Department of Agriculture, Animal and Plant Health Inspection Service, Wildlife Services from a power substation in …

One Step Closer To A Better Starling Trap, James R. Thiele

United States Department of Agriculture Wildlife Services: Staff Publications

European starlings (Sturnus vulgaris) are an invasive species in the United States that damage agriculture, personal property, and threaten human health and safety. The U.S. Department of Agriculture Wildlife Services provides technical support to mitigate damage by controlling starling populations at concentrated animal feeding operations, landfills, utilities, and urban areas. Wildlife Services uses DRC-1339, a registered toxicant, to reduce starling populations. Trapping can also be an effective tool but requires more time at a higher cost than DRC-1339. Trapping starlings, however, may be needed to provide a viable alternative to mitigate damage in areas where toxicant use may …

Estimating The Heritability Of Plasticity Of Thermal Tolerance And Its Application In The Restoration Of Endangered Caribbean Coral, Matz O. Indergard

UNF Graduate Theses and Dissertations

Abstract

Over the last two centuries anthropogenic activity has elevated atmospheric CO₂, creating a greenhouse effect that is predicted to elevate global temperatures 1-4^o C within the century. Increases in surface temperature pose a threat to the world’s coral reefs and have been the cause of many mass bleaching events. To combat this new threat, corals must migrate, acclimate, or evolve to rising temperatures. Phenotypic plasticity, or the ability of an individual to express different phenotypes to survive in different environments, is crucial for sessile organisms since it can increase survivability in species incapable of moving to …

Effects Of Abiotic Factors On Host Plant Quality And Community Structure Of The Parasitoid Guild That Attacks Asphondylia Borrichiae Midges On Borrichia Frutescens, Kevin Orta

UNF Graduate Theses and Dissertations

Asphondylia borrichiae is a gall-inducing insect that attacks its ancestral host plant Borrichia frutescens: through ovipositional mistakes it has acquired two additional hosts, Iva frutescens and Iva imbricata. Oviposition results in the formation of a gall, a tumor-like growth of plant tissue within which immature A. borrichiae develop. During development, immature A. borrichiae, are attacked by a suite of four generalist hymenopteran parasitoids. Of these, Galeopsomyia haemon and Torymus umbilicatus are facultative hyperparasitoids, more common and exhibit non-random attack patterns. In the present study, soil quality was manipulated through bi-weekly application of either ammonium nitrate fertilizer or sodium …

Bat Boxes As Mitigation Tools: Factors Impacting Microclimate And Myotis Sodalis Roost Selection, Reed Crawford

Online Theses and Dissertations

Environmental degradation has led to declines in available natural roosting habitat for bats. To mitigate this loss, practitioners often deploy artificial roosts (e.g., bat boxes). There are no established species-specific practices for deployment strategy and roost design selection, but occupancy rates are known to vary across species and roost microclimates can be harmful to bats. Providing bats with thermally beneficial roosts during summer could enhance overwinter survival of WNS-affected species. To further our understanding of roost preference and microclimate, we deployed 40 rocket box roosts of 5 designs at field sites in Indiana and Kentucky. Roosts were deployed in clusters …

The Importance Of Surface Mining As A Landscape Variable In Shaping Wild Bee Communities In Central Appalachian Forests, Amanda Sheryl Dunaway

Online Theses and Dissertations

Anthropogenic disturbance has led to widespread losses in biodiversity. Native bees (Hymenoptera, Apoidea) provide essential pollination services and have been declining in abundance dramatically in recent years. One potential cause of these declines is anthropogenic disturbance. Eleven sites were established in Southeastern Kentucky, U.S.A. where surface mining for coal is common. Data was analyzed using generalized linear mixed-effect models to detect the most important landscape scale variables, including mining, in shaping bee communities. Bee species richness was significantly lower on sites that contained surface mines, but abundance was similar between mined and unmined sites. The proportion of each nesting group …

Assessment Of Indiana Bat Reproductive Condition, Recapture Trends, And Temperatures Of Artificial Roosts In Kentucky, Michaela L. Rogers

Online Theses and Dissertations

Recovery of bat species impacted by white-nose syndrome (WNS) will necessarily require population growth. I assessed reproductive capability of the endangered Indiana bat (Myotis sodalis) in Kentucky, where WNS was first detected in hibernacula in April 2011. Due to loss of fat reserves associated with WNS infection, coupled with the energetic expenditures associated with pregnancy, I hypothesized mass of reproductively-active females captured during the maternity season would decrease across my data collection period (2017-2019). Further, I predicted that reproductive rates in the study population would be lower than historic rates for Kentucky. Mist net surveys around artificial maternity roosts at …

Abundance Of Songbirds In Eastern Hemlock Stands Following Chemical Treatment For Hemlock Woolly Adelgid, Natalie Sweeting

Online Theses and Dissertations

In the 1960’s the invasive Hemlock Woolly Adelgid (Adelges tsugae [hereafter, HWA]) began to spread west across the hemlock stands of the Eastern U.S. killing a significant number of Eastern Hemlock (Tsuga canadensis). While chemical treatments, primarily with the active ingredient imidacloprid, have been implemented, their effects on hemlock dependent avian species are largely unknown. A 2009 study, which took place as HWA was beginning to invade Kentucky, identified six indicator species that were positively and negatively correlated with eastern hemlock stands throughout the Appalachian Mountain region of Kentucky. Our study repeated bird and vegetation surveys at the same 65 …

Bee Abundance Along A Tropical Montane Elevational Gradient And Implications For Crop Pollination Services, Kristin M. Conrad

Online Theses and Dissertations

Tropical forests are among the biologically richest ecosystems on Earth, but how most organisms in these forests will respond to a warming climate remains uncertain. Insects are expected to be highly responsive to climate change due to their short life cycles that are strongly influenced by temperature. Plants depend on pollinators to set seed and reproduce, and many animal populations rely on the resources provided by flowering plants. There is an urgent need to document elevational distributions and thermal specialization for tropical bee species to understand how these important pollinators may respond to warming temperatures. My four-year study (2016-2019) aims …

Impacts Of Driving Factors On Annual Cicada Emergence In Relation To The Seasonal Abundance Of Eastern Copperheads (Agkistrodon Contortrix), Jesse Christian Sockman

Online Theses and Dissertations

For many species, life history events are cyclical and often correspond to specific environmental conditions. As a result of environmental variability, the optimal conditions that regulate the range and activity of highly regulated cyclical organisms, like cicadas, are subject to temporal change. Variability in cicada emergence and abundance has been shown to impact the species that rely on the rapid influx of nutrients. One such predator is the Eastern Copperhead (Agkistrodon contortrix) that has been noted feeding on emerging cicadas throughout their range. In eastern Kentucky, observations of copperheads congregating to feed on cicadas has been documented in recreational areas. …

The Effects Of Internal Physiology On Polyphenic Horn Development In The Dung Beetle Onthophagus Taurus, Naomi Garrett Williamson

Graduate Theses, Dissertations, and Problem Reports (ETD)

An organism’s phenotype can be affected in development by alterations to gene expression based on environmental inputs. Nutrition is one such environmental input and the central regulator of development of large horn or small horn phenotypes in the dung beetle species, Onthophagus taurus. However, little is known about the nature of chemical compounds that are critical to this plastic horn development. To better understand these compounds, we are utilizing an untargeted metabolomic approach as well as a targeted gene approach. Through the metabolomic approach, it was uncovered that environmental conditions tend to have a greater impact on metabolomic composition …

Leaf Choice By Salmonfly Nymphs (Pteronarcys Californica) In Western Montana, Emily L. Hamant, Art Woods, James Frakes

Undergraduate Theses, Professional Papers, and Capstone Artifacts

No abstract provided.

The Evolution Of Dragons, Laura J. Mayfield

Undergraduate Theses, Professional Papers, and Capstone Artifacts

Dragons have been depicted in human art as early as 4500 BCE. For centuries, these fantasy creatures have inspired countless folk and fantasy tales, as well as appearing in the art of different cultures around the world. Now there are thousands of different depictions of these huge, flying, fire-breathing lizards, but are any of them possible? In this study, I reference peer-reviewed scientific articles, phylogenetic analysis, and paleoart studies to create biologically-sound dragons. Basing the dragon lineage on a real branch of webbed-winged scansoriopterygids—an extinct family of climbing and gliding maniraptoran dinosaurs—I explored the possible wing-structure, fire-breathing abilities, and effects …

From Organisms To Ecosystems: Impacts Of Limb Loss And Regeneration On Crayfish Behavior, Luc Arnaud Dunoyer

Theses and Dissertations--Biology

The ability of some organisms to regenerate tissues and organs has fascinated naturalists since antiquity, dating back to the earliest accounts of scientific inquiry with Aristotle in Ancient Greece. Then, Darwin’s theory invigorated some scientists’ dream of stimulating (or reactivating) regenerative capacities in human beings by showing that we are related to highly regenerative organisms. More recently, a renewed interest in discovering the molecular and genetic basis for organ and tissue regeneration has led biologists to focus more specifically on a restrictive set of model organisms.

Although the process of limb regeneration is different between invertebrate and vertebrate organisms, it …