Ecology and Evolutionary Biology Commons^™

Five New Species Of Euscorpius Thorell, 1876 (Scorpiones: Euscorpiidae) From Albania, Greece, North Macedonia, And Serbia, František Kovařík, František Šťáhlavský

Euscorpius

Five new species are described: Euscorpius bonacinai sp. n. (Albania), E. janstai sp. n. (North Macedonia), E. kabateki sp. n. (Greece), E. sadileki sp. n. (Serbia), and E. scheraboni sp. n. (Greece), fully complemented with color photographs. New species are distinguished from all other species of the genus on the basis of five taxonomic characters. Two other new characters, shape of the pedipalp chela fingers and number of chromosomes, are presented and discussed. In addition to the analyses of external morphology, we also describe karyotypes of two species: E. janstai sp. n. (2n=112) and E. sadileki sp. n. (2n=90).

The Role Of Plasticity In Bumble Bee Responses To Environmental Variability, Matthew Austin

Dissertations

An aim of contemporary biology is elucidating the causes and consequences of phenotypic plasticity. Here, I approach this aim by exploring the eco-evolutionary dynamics of phenotypic plasticity and environmental variability in bumble bees (Apidae: Bombus), a congeneric clade of eusocial pollinating insects. Throughout their evolution, bumble bees have encountered spatiotemporal variability imposed by dynamic floral environments. Today, bumble bees additionally encounter spatiotemporal variability imposed by anthropogenic environmental change. In this dissertation, I explore how phenotypic plasticity affects how successfully bumble bees respond to environmental variability imposed by anthropogenic global change (Chapters 1 and 2) and their floral resources (Chapters …

Seasonal Variation Of Bacterial Diversity Along The Marine Particulate Matter Continuum, Mireia Mestre, Juan Höfer, M. Montserrat Sala, Josep M. Gasol

Research outputs 2014 to 2021

© Copyright © 2020 Mestre, Höfer, Sala and Gasol. Seasonal dynamics of ocean prokaryotic communities in the free-living fraction have been widely described, but less is known about the seasonality of prokaryotes inhabiting marine particles. We describe the seasonality of bacterial communities in the particulate matter continuum by sampling monthly over two years in a temperate oligotrophic coastal ecosystem and using a serial filtration (including six size-fractions spanning from 0.2 to 200 μm). We observed that bacterial communities in the particulate matter continuum had annual changes following harmonic seasonal oscillations, where alpha, beta, and gamma diversity increased during the warm …

Do Beetles Have Experiences? How Can We Tell?, Matt Cartmill

Animal Sentience

We attribute consciousness to other humans because their anatomy and behavior resembles our own and their verbal descriptions of subjective experiences correspond to ours. Nonhuman mammals have somewhat humanlike behavior and anatomy, but without the verbal descriptions. Their sentience is therefore open to Cartesian doubt. Robot "minds" lack humanlike behavior and anatomy, and so their sentience is generally discounted no matter what sentences they generate. Invertebrates lack both neurological similarity and language. Although it may be safest in making moral judgments to assume that some invertebrates are sentient, cogent reasons for thinking so must await an objective causal explanation for …

Avoiding Anthropocentrism In Evolutionarily Inclusive Ethics, Simon Fitzpatrick

Animal Sentience

Mikhalevich & Powell are to be commended for challenging the “invertebrate dogma” that invertebrates are unworthy of ethical concern. However, developing an evolutionarily inclusive ethics requires facing some of the more radical implications of rejecting hierarchical scala naturae and human-centered conceptions of the biological world. In particular, we need to question the anthropocentric assumptions that still linger in discussions like these.

Zones Of Precaution, Jonathan Birch

Animal Sentience

My commentary focusses on Mikhalevich & Powell’s criticisms of the Animal Sentience Precautionary Principle. I emphasize the pragmatic nature of my rationale for proposing that, rather than extending the scope of animal welfare protection on a species-by-species basis, we should be willing to protect entire Linnaean orders on the basis of evidence from a single species.

Brain Complexity, Sentience And Welfare, Donald M. Broom

Animal Sentience

Neither sentience nor moral standing is confined to animals with large or human-like brains. Invertebrates deserve moral consideration. Definition of terms clarifies the relationship between sentience and welfare. All animals have welfare but humans give more protection to sentient animals. Humans should be less human-centred.

Invertebrate Cognition, Sentience And Biology, Georges Chapouthier

Animal Sentience

All animal species have adapted for survival and no species is superior overall. For cognitive capacities and sentience, invertebrates such as the octopus, although quite unlike vertebrates, can achieve similar performance levels. So can other invertebrates with small brains; hence they too, as sentient beings, deserve moral consideration from humans. How are we to identify these species? Only though a detailed analysis of their behavior. The decision, which is a moral judgment, depends on biological knowledge that still needs to be acquired.

Convergent Evolution Of Sentience?, Culum Brown Prof.

Animal Sentience

Mikhalevich & Powell make a compelling case that some invertebrates may be sentient and that our moral obligations in the context of welfare should hence extend to them. Although the case is similar to that made for fishes, there is one obvious difference in that examples of invertebrate sentience probably arose independently from vertebrate sentience. We have unequivocal proof that complex cognition arose multiple times over evolutionary history. Given that cognition is our best tool for indirectly quantifying sentience, it seems highly likely that this multiple polygenesis may also have occurred for sentience. In acknowledging this, we must accept that …

Protecting Endangered Species In The Usa Requires Both Public And Private Land Conservation, Niall G. Clancy, John P. Draper, J. Marshall Wolf, Umarfarooq A. Abdulwahab, Maya Cassidy Pendleton, Soren Brothers, Janice Brahney, Jennifer M. Weathered, Edd Hammill, Trisha B. Atwood

Ecology Center Publications

Crucial to the successful conservation of endangered species is the overlap of their ranges with protected areas. We analyzed protected areas in the continental USA to assess the extent to which they covered the ranges of endangered tetrapods. We show that in 80% of ecoregions, protected areas offer equal (25%) or worse (55%) protection for species than if their locations were chosen at random. Additionally, we demonstrate that it is possible to achieve sufficient protection for 100% of the USA’s endangered tetrapods through targeted protection of undeveloped public and private lands. Our results highlight that the USA is likely to …

Notes On The Diet And Reproduction Of The Bark Scorpion Centruroides Gracilis (Scorpiones: Buthidae) On Utila Island, Honduras, Anna M. Davison, Tom W. Brown, Cristina Arrivillaga

Euscorpius

The brown bark scorpion Centruroides gracilis (Latreille, 1804) (Buthidae) is an abundant and widespread species, however, fairly little is known about its ecology and natural history. We include several observations from Utila Island, Honduras, that expand on the known literature regarding the diet and reproductive behavior of C. gracilis. We report several prey items for this opportunistic species, which include invertebrates such as spiders (including tarantulas), centipedes, katydids, and crickets; as well as a case of cannibalism between two adult females C. gracilis. We suggest that such cannibalism may be driven by high population densities and/or strong intraspecific …

Minds, Morality And Midgies, Brian Key, Deborah Brown

Animal Sentience

Mikhalevich & Powell argue that the exclusion of the vast majority of arthropods from moral standing is unwarranted, particularly given the purported evidence for cognition and sentience in these organisms. The implied association between consciousness and moral standing is questionable and their assumption that rich forms of cognition and flexible behavior are dependent on phenomenal consciousness needs to be reconsidered in light of current neuroscientific evidence. We conclude by proposing a neural algorithmic approach for deciphering whether organisms are capable of subjective experience.

Discovery Of The World’S Highest-Dwelling Mammal, Jay F. Storz, Marcial Quiroga-Carmona, Juan C. Opazo, Thomas Bowen, Matthew Farson, Scott J. Steppan, Guillermo D’Elía

Jay F. Storz Publications

Environmental limits of animal life are invariably revised when the animals themselves are investigated in their natural habitats. Here we report results of a scientific mountaineering expedition to survey the high-altitude rodent fauna of Volcán Llullaillaco in the Puna de Atacama of northern Chile, an effort motivated by video documentation of mice (genus Phyllotis) at a record altitude of 6,205m. Among numerous trapping records at altitudes of >5,000 m, we captured a specimen of the yellow-rumped leaf-eared mouse (Phyllotis xanthopygus rupestris) on the very summit of Llullaillaco at 6,739 m. This summit specimen represents an altitudinal world …

Spatiotemporal Genetic Diversity Of Lions Reveals The Influence Of Habitat Fragmentation Across Africa, Caitlin J. Curry, Brian W. Davis, Laura D. Bertola, Paula A. White, William J. Murphy, James N. Derr

Publications and Research

Direct comparisons between historical and contemporary populations allow for detecting changes in genetic diversity through time and assessment of the impact of habitat fragmentation. Here, we determined the genetic architecture of both historical and modern lions to document changes in genetic diversity over the last century. We surveyed microsatellite and mitochondrial genome variation from 143 high-quality museum specimens of known provenance, allowing us to directly compare this information with data from several recently published nuclear and mitochondrial studies. Our results provide evidence for male-mediated gene flow and recent isolation of local subpopulations, likely due to habitat fragmentation. Nuclear markers showed …

Microbiome Shifts Associated With The Introduction Of Wild Atlantic Horseshoe Crabs (Limulus Polyphemus) Into A Touch-Tank Exhibit, Ariel D. Friel, Sean A. Neiswenter, Cale O. Seymour, Lauren Rose Bali, Ginger Mcnamara, Fabian Leija, Jack Jewell, Brian P. Hedlund

Life Sciences Faculty Research

The Atlantic horseshoe crab (Limulus polyphemus) is a common marine aquarium species and model organism for research. There is potential monetary and conservation value in developing a stable captive population of horseshoe crabs, however, one major impediment to achieving captivity is a lack of knowledge regarding captive diseases. We utilized 16S rRNA gene amplicon sequencing to track changes in the microbiomes of four body locations in three wild-caught (tracked over 14 months in captivity) and three tank-acclimated (>2 years in captivity) adult L. polyphemus in a touch tank at Shark Reef Aquarium at Mandalay Bay in Las Vegas, NV. …

Maximum Likelihood Estimation Of Species Trees And Anomaly Zone Detection Using Ranked Gene Trees, Anastasiia Kim

Mathematics & Statistics ETDs

A phylogenetic tree represents the evolutionary relationships among a set of organisms. Gene trees can be used to reconstruct phylogenetic trees. The methods in this dissertation focus on the gene tree topologies with emphasis on ranked gene tree topologies. A ranked tree depicts the order in which nodes appear in the tree together with topological relationships among gene lineages. One challenge that arises during phylogenetic inference is the existence of the anomaly zones, the regions of branch-length space in the species tree that can produce gene trees that have topologies differing from the species tree topology but are more probable …

Habitat Fragmentation And Range Margin Effects On Dispersal And Interactions Between Competitors, Rachel Roxann Harman

LSU Doctoral Dissertations

Dispersal is a fundamental process that affects local and regional dynamics, including population persistence, range expansion, and interspecific interactions, particularly as disturbance through habitat fragmentation and climate change. Here, my main objective was to ascertain how fragmentation affects dispersal and the interactions of competitors within the local patch and regional landscape. In my second chapter, I assessed dispersal through a literature review and population persistence model to examine the breadth and frequency of different density-emigration forms that occur in nature, including forms that are not prevalent in the literature. I conclude that these rare forms have important population dynamic consequences …

Towards More Realistic Estimates Of Dom Decay In Streams: Incubation Methods, Light, And Non-Additive Effects, Julia E. Kelso, Emma J. Rosi, Michelle A. Baker

Ecology Center Publications

Dissolved organic matter (DOM) is the largest pool of organic matter in aquatic ecosystems and is a primary substrate for microbial respiration in streams. However, understanding the controls on DOM processing by microbes remains limited, and DOM decay rates remain largely unconstrained. Many DOM decay rates are quantified with bioassays in dark bottles, which may underestimate DOM decay in streams because these bioassays do not include a benthic zone and do not account for abiotic factors of DOM loss, such as photodegradation and volatilization. We measured decay of labile and semi-labile DOM over 3 d in experimental streams and bottle …

Plant And Soil Responses To Sediment Deposition And Nutrient Enrichment In Healthy, Deteriorating, And Newly Created Coastal Marshes In Barataria Basin, Louisiana: Implications For Mississippi River Sediment Diversions, Gina N. Groseclose

LSU Master's Theses

To offset wetland loss in the Mississippi River Delta, sediment diversions that will re-introduce river water and sediment into wetlands are being planned for the lower Mississippi River. River diversions will also deliver high nutrient loads, which may reduce belowground plant productivity, reducing inputs of organic matter important for marsh accretion to keep pace with sea-level rise. However, belowground productivity responses to the combinatory effects of sediment and nutrients are unknown. To test the hypotheses that nutrient enrichment and sediment deposition interact to influence vegetation structure, belowground plant productivity and decomposition, and surface accretion, a field experiment was implemented in …

A New Lesser Antillean Scorpion Of The Genus Didymocentrus Kraepelin, 1905 (Scorpiones: Diplocentridae), Rolando Teruel, Karl Questel

Euscorpius

A new species of the diplocentrid scorpion of the genus Didymocentrus Kraepelin, 1905 is herein described from the Lesser Antillean island of Martinique. It long remained misidentified as Didymocentrus lesueurii (Gervais, 1844), the only species of this genus inhabiting the adjacent island of Saint Lucia. The direct comparison of adults of both sexes from these two islands revealed solid morphological characters, which warrant their recognition as two different taxa. Each one is endemic from a single major island, where it is widespread even in its satellite islets. This addition raises the known composition of the genus to 12 species, 10 …

Fish Community Composition And Structure Near A Freshwater River Diversion In Southeastern Louisiana, Rachel L. Snider

LSU Master's Theses

Gulf of Mexico estuaries, particularly in Louisiana, are among the world’s most productive, with landings of commercially- and recreationally-important species exceeding all other contiguous US states. Coastal wetlands are disappearing at an alarming rate because they have been impounded from Mississippi River water and sediment. Although controversial, one proposed solution is to re-route the Mississippi River through diversions and siphons to supply the freshwater and sediments necessary to rebuild vanishing wetlands, particularly in Barataria Bay and Breton Sound, LA. This strategy is one approach outlined in the Louisiana Coastal Master Plan. This project aimed to describe the composition and structure …

Relationships Between Vegetation And Soil Seed Banks Along A Center-To-Edge Gradient On A Tropical Coral Island, Yao Huang, Hai Ren, Jun Wang, Nan Liu, Shuguang Jian, Hongyue Cai, Dafeng Hui, Qinfeng Guo

Biology Faculty Research

Few studies have focused on the relationships between vegetation and soil seed banks on small islands. To better understand the pattern and regeneration potential of seed banks on tropical coral islands, we measured environmental factors and the species composition, and species richness of soil seed banks and vegetation along a gradient from the center to the edges on East Island in the South China Sea. The results showed that the similarity between the species composition of vegetation and seed banks increased from the center to the edge. In the center, species richness in both vegetation and seed banks was positively …

Six New Species Of Orthochirus Karsch, 1892 From Iran (Scorpiones: Buthidae), František Kovařík, Shahrokh Navidpour

Euscorpius

Six new scorpion species from Iran, Orthochirus hormozganensis sp. n. (Hormozgan Province), O. kermanensis sp. n. (Kerman Province), O. kucerai sp. n. (Kerman Province), O. masihipouri sp. n. (Bushehr Province), O. semnanensis sp. n. (Semnan Province), and O. vignolii sp. n. (Yazd Province) are described, compared with other Iranian Orthochirus species, and fully illustrated with color photographs. A key and a distribution map of Orthochirus of Iran, Turkey, and Iraq (18 species) are included.

Floodplain Forest Regeneration Dynamics In The Lower Mississippi River Alluvial Valley, Whitney Anne Kroschel

LSU Doctoral Dissertations

Floodplain forest species diversity is driven, in part, by variation in disturbance regime. Flood patterns create heterogeneity in microsite quality from small differences in elevation across a floodplain which, in turn, influence flood timing and duration. Differences in species’ regeneration niches in relation to hydrologic patterns can account for long-term coexistence of various species. In the past century floodplain forests have exhibited a wide range of changes in stand development and species composition as a result of altered hydrology in rivers and floodplains. I evaluated the role of regeneration in floodplain forest systems of the Lower Mississippi River Alluvial Valley …

Using Primary Literature On Sars‐Cov‐2 To Promote Student Learning About Evolution, Jeremy L. Hsu

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

The ongoing COVID‐19 pandemic caused by SARS‐CoV‐2 has caused widespread deaths, illnesses, and societal disruption. I describe here how I pivoted a discussion‐based senior biology capstone course to include a multiweek module surrounding one primary literature paper on the evolution of SARS‐CoV‐2 and the subsequent scientific discourse about the paper. Using a gradual reveal of the paper following the CREATE method (consider, read, elucidate, and think of the next experiment), I challenged students to learn new evolutionary principles and critically analyze the data surrounding the evolution and transmission of SARS‐CoV‐2 presented in the paper. I also provide general advice for …

An Applied Ecology Of Fear Framework: Linking Theory To Conservation Practice, Kaitlyn M. Gaynor, Michael J. Cherry, Sophie L. Gilbert, Michael T. Kohl, Courtney L. Larson, Thomas M. Newsome, Laura R. Prugh, Justin P. Suraci, Julie K. Young, Justine A. Smith

United States Department of Agriculture Wildlife Services: Staff Publications

Research on the ecology of fear has highlighted the importance of perceived risk from predators and humans in shaping animal behavior and physiology, with potential demographic and ecosystem-wide consequences. Despite recent conceptual advances and potential management implications of the ecology of fear, theory and conservation practices have rarely been linked. Many challenges in animal conservation may be alleviated by actively harnessing or compensating for risk perception and risk avoidance behavior in wild animal populations. Integration of the ecology of fear into conservation and management practice can contribute to the recovery of threatened populations, human–wildlife conflict mitigation, invasive species management, maintenance …

Reproductive Effort Of Montastraea Cavernosa Across Depth In The Context Of Both Climate Change Refugia And Emergent Disease, Jeanne Bloomberg

LSU Master's Theses

As coral populations on shallow reefs decline globally, mesophotic coral ecosystems (MCE) have been suggested as potential coral refugia in the face of climate changes, leading to the development of a comprehensive deep reef refugia hypothesis. The current study assesses the climate and disease refuge potential of MCEs in the U.S. Virgin Islands (USVI) for the gonochoric, broadcast-spawning species Montastraea cavernosa. Polyp, population, and total habitat fecundities were estimated across the species’ depth range, and changes to population oocyte production over time due to recent ecosystem disturbances were considered. The number of gonads producing oocytes in each polyp and oocyte …

Plankton Dynamics In An Urban, Subtropical Lake Prior To Lake Restoration, Jennifer C. Pulsifer

LSU Master's Theses

This research assessed plankton dynamics in two urban, subtropical lakes (University Lake and City Park Lake) shortly before a proposed and approved lake restoration project. Plankton dynamics were determined in University Lake by the dilution method to attempt to quantify growth rates of phytoplankton and grazing rates of zooplankton. Landry and Hassett’s (1982) dilution method has been widely used in marine systems to estimate rates of growth and grazing. In many marine systems, nutrients must be added to prevent nutrient limitation. However, it is assumed, due to the hypereutrophic conditions, that nutrients would not be a limitation in University Lake. …

Characterization Of Shallow Subsurface Hydrology In Large Fine-Grained Floodplains, Mary Grace Lemon

LSU Doctoral Dissertations

Floodplains are hydrologically dynamic, receiving water from overbank events, hyporheic flows, local precipitation, and regional groundwater sources. These sources are variously important contributors to the heterogeneous floodplain water pool that includes matrix water in soil micropores, mobile water in soil macropores, groundwater below the rooting zone, ephemeral to seasonal surface storage, and permanent surface water features such as oxbow lakes, sloughs, and other secondary channels. All sources may be ecologically relevant for floodplain vegetation, but the exact roles of each source in both controlling soil water and shallow groundwater recharge and in controlling floodplain water drainage are not well understood, …

Immune Function During Pregnancy Varies Between Ecologically Distinct Populations, Carmen Hové, Benjamin C. Trumble, Amy S. Anderson, Jonathan Stieglitz, Hillard Kaplan, Michael Gurven, Aaron Blackwell

ESI Publications

Background and objectives

Among placental mammals, females undergo immunological shifts during pregnancy to accommodate the fetus (i.e. fetal tolerance). Fetal tolerance has primarily been characterized within post-industrial populations experiencing evolutionarily novel conditions (e.g. reduced pathogen exposure), which may shape maternal response to fetal antigens. This study investigates how ecological conditions affect maternal immune status during pregnancy by comparing the direction and magnitude of immunological changes associated with each trimester among the Tsimane (a subsistence population subjected to high pathogen load) and women in the USA.

Methodology

Data from the Tsimane Health and Life History Project (N = 935) and …