Ecology and Evolutionary Biology Commons^™

Taking The Bait: Species Taking Oral Rabies Vaccine Baits Intended For Raccoons, Betsy S. Haley, Are R. Berentsen, Richard M. Engeman

United States Department of Agriculture Wildlife Services: Staff Publications

Raccoon rabies in eastern USA is managed by strategically distributing oral rabies vaccine (ORV) baits. The attractiveness, palativity, density, and non-target species bait take affect ORV effectiveness. We examined raccoon and non-target species differences in investigating/removing fish-meal polymer and coated sachet baits applied to simulate two aerial bait distribution densities. Bait densities of 150 baits/km² and 75 baits/km² were evaluated, respectively, in zones expected to have high and low raccoon densities. Three primary non-target species visited baits: coyotes, white-tailed deer, and feral swine. The proportion of bait stations visited by raccoons during 1 week observation periods ranged from …

Potential Role Of Wildlife In The Usa In The Event Of A Foot-And-Mouth Disease Virus Incursion, Vienna R. Brown, Sarah N. Bevins

United States Department of Agriculture Wildlife Services: Staff Publications

Foot-and-mouth disease (FMD) is caused by foot-and-mouth disease virus (FMDV) which affects domestic and wild cloven-hoofed species. The FMD-free status of the USA and the tremendous economic impact of a virus incursion motivated the development of this evaluation of the potential role of wildlife in the event of a virus introduction. Additionally, this manuscript contains a summary of US vulnerabilities for viral incursion and persistence which focuses specifically on the possible role of wildlife. The legal movement of susceptible live animals, animal products, by-products and animal feed containing animal products pose a risk of virus introduction and spread. Additionally, the …

A Bioeconomic Model For The Optimization Of Local Canine Rabies Control, Aaron Anderson, Johann Kotze, Stephanie A. Shwiff, Brody Hatch, Chris Slootmaker, Anne Conan, Darryn Knobel, Louis H. Nel

United States Department of Agriculture Wildlife Services: Staff Publications

We present a new modeling tool that can be used to maximize the impact of canine rabies management resources that are available at the local level. The model is accessible through a web-based interface that allows for flexibility in the management strategies that can be investigated. Rabies vaccination, sterilization, chemo-contraception, and euthanasia can be specified and limited to specific demographic groups. Additionally, we allowed for considerable complexity in the specification of management costs. In many areas, the costs of contacting additional dogs increases as management effort increases, and this can have important strategic implications. We illustrated the application of the …

Trail Cameras Are A Key Monitoring Tool For Determining Target And Non-Target Bait-Take During Rodent Removal Operations: Evidence From Desecheo Island Rat Eradication, Aaron B. Shiels, D. Will, C. Figuerola-Hernández, K.J. Swinnerton, S. Silander, C. Samra, G.W. Witmer

United States Department of Agriculture Wildlife Services: Staff Publications

Efforts to remove invasive rodents (e.g. Rattus spp. and Mus musculus) from islands often use toxicant-laced baits containing the anticoagulants brodifacoum or diphacinone. Rodenticide baits are generally delivered through aerialor hand-broadcast, or in bait stations. These baits are not rodent-specific and are subject to non-target consumption or secondary exposure (e.g. an individual preying upon another individual that has consumed bait). During rodenticide applications, it is generally unknown which animals are visiting and consuming bait; and to quantify this, we recommend using trail cameras (e.g. Reconyx^tm motion-activated infra-red) positioned to monitor individual bait pellets. To demonstrate the importance and effectiveness …

Black Bear Use Of Forest Roads In Western Washington, Gary W. Witmer

United States Department of Agriculture Wildlife Services: Staff Publications

Radiolocations (108) of 20 black bears were used to assess use or avoidance of 3 forest road types in western Washington. Distances of bears to each type of road were compared to distances of 108 random points using t-tests. Females and males avoided 2-lane roads, while only males avoided 1-lane roads, the most common road type in the area. Females, but not males, were located closer to overgrown, spur roads than expected. This road type has substantial cover of grasses, forbs, and berry-producing shrubs along with protective tree cover. This situation may provide easy travel for females along with security …

Home Range And Habitat Use Of West Virginia Canis Latrans (Coyote), Lauren M. Mastro, Dana J. Morin, Eric M. Gese

United States Department of Agriculture Wildlife Services: Staff Publications

Canis latrans (Coyote) has undergone a range expansion in the United States over the last century. As a highly opportunistic species, its home range and habitat use changes with ecological context. Coyotes were first reported in West Virginia in 1950 but were not commonly observed until the 1990s, and there is scant information on Coyotes in the region. We used telemetry data from 8 radiocollared Coyotes in West Virginia to estimate home-range size and third-order habitat selection. Home-range areas (95% utilization distributions; UDs) varied from 5.22 to 27.79 km2 (mean = 12.48 ± 2.61 km2), with highly concentrated use of …

The Role Of Scavenging In Disease Dynamics, Joaquín Vicente, Kurt C. Vercauteren

United States Department of Agriculture Wildlife Services: Staff Publications

Contents

Introduction................ 161

The Use of Animal Remains and the Exposure of Scavengers to Disease........ 163

The Relevance of Scavenging for Pathogens to Spread and Persist.......... 166

Human Related Factors Resulting in Increased Risk for Disease Transmission Through Scavenging.............. 170

Management of Scavenging to Reduce Disease Risks.............. 173

Restoration of Large Predators.................. 174

Elimination of Hunting of Scavengers............ 174

Destruction of Big Game and Domestic Animal Carcasses........... 174

Restoration of the Effects of Overabundance............. 175

Excluding Mammalian and Avian Scavengers from Natural Carrions.......... 176

Excluding Mammalian and Avian Scavengers from Vulture Restaurants........... 176

Conclusions and Future Perspectives........... 178

References............... 178

Locally Fixed Alleles: A Method To Localize Gene Drive To Island Populations, Jaye Sudweeks, Brandon Hollingsworth, Dimitri V. Blondel, Karl J. Campbell, Sumit Dhole, John D. Eisemann, Owain Edwards, John Godwin, Gregg R. Howald, Kevin P. Oh, Antoinette J. Piaggio, Thomas A.A. Prowse, Joshua V. Ross, J. Royden Saah, Aaron B. Shiels, Paul Q. Thomas, David W. Threadgill, Michael R. Vella, Fred Gould, Alun L. Lloyd

United States Department of Agriculture Wildlife Services: Staff Publications

Invasive species pose a major threat to biodiversity on islands. While successes have been achieved using traditional removal methods, such as toxicants aimed at rodents, these approaches have limitations and various off-target effects on island ecosystems. Gene drive technologies designed to eliminate a population provide an alternative approach, but the potential for drive-bearing individuals to escape from the target release area and impact populations elsewhere is a major concern. Here we propose the “Locally Fixed Alleles” approach as a novel means for localizing elimination by a drive to an island population that exhibits significant genetic isolation from neighboring populations. Our …

In The News, Jason Matthews, Joe N. Caudell

Human–Wildlife Interactions

No abstract provided.

The Effects Of Forest Gaps On Animal Communication Networks, Cedar Arran Mathers-Winn

Graduate Student Theses, Dissertations, & Professional Papers

To avoid predation, many animals have evolved complex systems of anti-predator communication. Alarm calls are a key component of anti-predator behavior in many birds, and can provide detailed information about predators. Additionally, many birds and mammals produce and respond to each other’s alarm calls, creating a complex communication network. Furthermore, individuals may give alarm calls in response to the alarm calls of others nearby, without actually seeing a predator. This makes possible the spatial spread of alarm information, which can result in complex communication networks extending over a large area. However, this requires suitable habitat in which birds will be …

Tiger Monitoring In Bhutan Using Non-Invasive Genetic Tools, Tashi Dhendup

Graduate Student Theses, Dissertations, & Professional Papers

Large carnivores are one of the most threatened group of animals in the world. They suffer from prey depletion, persecution by humans, and habitat loss and fragmentation which are extensively driven by anthropogenic activities. One such species is the tiger Panthera tigris. Tigers are found in thirteen countries in Asia and are protected across the range; however, tiger numbers have declined as an after effect of habitat loss, prey depletion and poaching. Human-induced changes have reduced the tiger's historical range to about 7% in which a little more than 3900 tigers are found. Most of these individuals currently exist …

Population And Breeding Ecology Of Sagebrush Steppe Songbirds, Kayla Ann Ruth

Graduate Student Theses, Dissertations, & Professional Papers

Sagebrush steppe is one of the most threatened ecosystems in North America. Domestic livestock grazing is the dominant land use of sagebrush steppe across the west. Rest-rotation grazing systems can be a conservation management tool, most recently, by the Natural Resource Conservation Service - Sage Grouse Initiative (SGI). The goal of SGI is to encourage private landowners to use a livestock grazing regime that maintains or improves habitat for greater sage-grouse (Centrocercus urophasianus), as well as improve rangeland productivity. Songbirds are biological indicators that can assess the health of sagebrush steppe. Avian adult density estimates are often used …

Shaping The Tools Of Battle : Sexual Selection, Contest Dynamics, And Weapon Divergence In The Asian Rhinoceros Beetle Trypoxylus Dichotomus, Jillian F. Del Sol

Graduate Student Theses, Dissertations, & Professional Papers

Exaggerated weapons of sexual selection often diverge more rapidly and dramatically than other body parts, suggesting that relevant agents of selection may be discernible in contemporary populations. I examined the ecology, reproductive behavior, and strength of sexual selection on horn length in five recently diverged beetle populations that differ in relative horn size. I show that mating system ecology differs between these locations and corresponds with the local strength of contemporary selection on horn length. Comparisons of ecological conditions and selection strength across populations offer a critical first step towards meaningfully linking mating system dynamics, selection patterns, and diversity in …

Quantifying Coat Color Phenology Of Sympatric Snowshoe Hares And Weasels, Brandon Murray Davis

Graduate Student Theses, Dissertations, & Professional Papers

No abstract provided.

Adaptation To A Geothermal Soil Mosaic Shapes Genome-Wide Patterns Of Diversity And Differentiation In Yellowstone Monkeyflowers (M. Guttatus), Kory M. Kolis

Graduate Student Theses, Dissertations, & Professional Papers

Local adaptation across habitat mosaics can generate phenotypic divergence in the face of gene flow; however, adaptive divergence in reproductive traits may also create barriers to genetic exchange within and among distinct habitats. In plants, life-history, phenology, and mating system traits may lead to divergent selection over short (microgeographic) spatial scales. Changes to these traits are likely to directly affect patterns of gene flow and genomic diversity. In this study, we combined field, common garden, and population genomic approaches to investigate phenotypic and genetic variation in Mimulus guttatus (yellow monkeyflowers) adapted to a complex geothermal soil mosaic in Yellowstone National …

Colloidal And Truly Dissolved Metal(Loid)S In Wastewater Lagoons And Their Removal With Floating Treatment Wetlands, Lauren Sullivan

Graduate Student Theses, Dissertations, & Professional Papers

Climate change is predicted to cause continuing declines in late-season streamflow, thus increasing the relative contribution of wastewater effluent to surface water flows. Wastewater effluent represents a critical point source of metal and metalloid contamination to aquatic ecosystems and wastewater lagoons are the most common wastewater treatment system in the rural United States. Although the fraction of total wastewater metals and metalloids in "dissolved" forms (defined here asnm) likely drives the potential for negative effects on receiving waters, this broad operational definition lumps truly dissolved solutes (nm) with small colloids and nanomaterials (1-450 nm; hereafter colloids). This size distinction may …

Assessing The Robustness Of Time-To-Event Abundance Estimation, Kenneth E. Loonam

Graduate Student Theses, Dissertations, & Professional Papers

Abundance estimates can inform management policies and are used to address a variety of wildlife research questions, but reliable estimates of abundance can be difficult and expensive to obtain. For low-density, difficult to detect species, such as cougars (Puma concolor), the costs and intensive field effort required to estimate abundance can make working at broad spatial and temporal scales impractical. Remote cameras have proven effective in detecting these species, but the widely applied methods of estimating abundance from remote cameras rely on some portion of the population being marked or uniquely identifiable, limiting their utility to populations with naturally occurring …

Methods For Estimating Mountain Goat Occupancy And Abundance, Molly Mcdevitt

Graduate Student Theses, Dissertations, & Professional Papers

Abundance and occupancy are two parameters of central interest to the field of ecology. Furthermore, accurate (both precise and unbiased) estimates are key pieces to the puzzle of effective wildlife management decision-making. While there exist a variety of sampling techniques and statistical models for effectively estimating population parameters for frequently encountered and large mammals, methods for sampling unmarked and rare species are few and far between. The first step to acquiring usable parameter estimates is through the use of sampling theory and incorporation of probabilistic sampling designs to collect count-data and occurrence-data. Often, it is assumed that probabilistic sampling designs …

Response Of Headwater Amphibians To Long-Term Logging Impacts And Assessing Potential For Restoration In Redwood National And State Parks, Alyssa Marquez

Cal Poly Humboldt theses and projects

The timescale of community response to disturbance varies drastically, and slow-recovering ecosystems such as coastal redwood forests may take hundreds of years to return to old-growth conditions post-logging. Few studies have quantified long-term (>50 years) impacts of disturbance on ecosystems, specifically aquatic ecosystems. This study provides evidence of the persistence of historical logging impacts 50 years post-logging through the comparison of headwater amphibian populations (occupancy and abundance) and stream characteristics using a control-treatment study with a logged watershed, Streelow Creek, as the treatment and a pristine old-growth watershed, Godwood Creek, as the control. The immediately adjacent old-growth watershed acts …

Life History Of The Coastal Tailed Frog (Ascaphus Truei) Across An Elevational Gradient, Adrian Daniel Macedo

Cal Poly Humboldt theses and projects

The life history of a species is described in terms of its growth, longevity, and reproduction. Unsurprisingly, life history traits are known to vary in many taxa across environmental gradients. In the case of amphibians, species at high elevations and latitudes tend to have shorter breeding seasons, shorter activity periods, longer larval periods, reach sexual maturity at older ages, and produce fewer and larger clutches per year.

The Coastal Tailed Frog (Ascaphus truei) is an ideal species for the study of geographic variation in life history because it ranges across most of the Pacific Northwest from northern California …

Effects Of Longline Oyster Aquaculture On Benthic Invertebrate Communities In Humboldt Bay, California, Hannah C. Coe

Cal Poly Humboldt theses and projects

Oyster aquaculture has had a commercial presence in Humboldt Bay for nearly 60 years and has experienced changes in scope and methodology as the industry has grown. The traditional method of bottom-culture oyster beds has been phased out, with longline oyster aquaculture becoming the common replacement. However, this transition has preceded much of the research regarding potential impacts to the broader ecosystem. The benthic invertebrate community of Humboldt Bay is a vital food source for many commercially important fishes, as well as for the many shorebirds that utilize Humboldt Bay. The importance of the invertebrate community to the ecosystem highlights …

Freshwater And Marine Survival Of Coho Salmon (Oncorhynchus Kisutch) As A Function Of Juvenile Life History, Grace Katherine Ghrist

Cal Poly Humboldt theses and projects

Juvenile Coho Salmon (Oncorhynchus kisutch) in coastal California streams exhibit various life history strategies during their freshwater development. One strategy of interest to managers and conservationists is the early migrant. Juvenile early migrants emigrate from natal habitat into lower parts of the watershed or estuary during their first fall or winter, where they rear before migration to the ocean. By contrast, the more prevalent spring migrant resides in natal reaches over the winter and migrates directly to the ocean the following spring. Salmon monitoring programs generally estimate juvenile production and demographic rates using only spring migrants, and these …

Evaluation Of Range-Wide Occupancy And Survey Methods For The Giant Kangaroo Rat (Dipodomys Ingens), Alyssa E. Semerdjian

Cal Poly Humboldt theses and projects

Though habitat suitability and occupancy are often correlated, they cannot always be inferred from each other. Therefore, a solid understanding of both is essential to effectively manage species. Recent studies have assessed range-wide habitat suitability for the giant kangaroo rat (Dipodomys ingens; GKR), but data regarding occupancy is lacking in parts of its distribution. Satellite and aerial imagery were used to identify GKR burrows across their known range, producing a range-wide occupancy map and non-invasive survey methods including track plates, manned flight, unmanned aerial vehicle, and sign surveys were conducted to determine effective methods for monitoring GKR occupancy. …

Digital Repositories In Ecology And Environment: An Analytical Study, Midhat Mehraj, Ikhlaq Ur Rehman, Shohar Bano

Library Philosophy and Practice (e-journal)

The present study aims to identify the status of Open Access Repositories (OARs) in the field of Ecology and Environment. The data was collected from the Directory of Open Access Repositories (OpenDOAR). Data collected was analysed on different parameters such as geographical distribution, software usage, content type, repository type and language diversity. As of now OpenDOAR holds 176 repositories in the field of Ecology and Environment. The findings further reveal that the maximum number of repositories belong to the USA accounting for 18(10.2%). Also, the maximum number of repositories are institutional accounting for 134(76%).

Behavioral Assessment Of Social Structure And Guest Provisioning Program Participation Of Zoo-Housed Giraffes (Giraffa Camelopardalis) Under Varying Spatial Availability., Fatima Ramis

UNF Graduate Theses and Dissertations

Close encounters with animals are considered integral for visitors and are trademark components of traditional educational engagement in zoological parks. As capacity for up-close encounters continue to increase with a simultaneous development in the field of animal welfare science, behavioral assessments on the role of common close encounters is timely. Giraffes (Giraffa camelopardalis) visitor feeding programs are established in approximately 57% of institutions accredited by Association of Zoos and Aquariums. Due to successful breeding and capacity building for zoological giraffe populations, this percentage will likely continue to increase. There is a great deal of variation in the environmental …

Examining Aspen Expansion From Before And After Prescribed Burning In A Native Fescue Grassland Through Geospatial Techniques, Christopher Anderson

Dissertations, Master's Theses and Master's Reports

Native fescue (Fescue spp.) grasslands of the Intermountain West have become increasingly scarce due to the advent of modern agriculture, the loss of Indigenous people’s land management practices, modern wildfire management and the extirpation of bison (Bison bison bison). Native grassland is a biodiversity hot-spot, is significant for carbon sequestration, and essential to many species of flora and fauna that occur in the ecosystem. Our study site, on the Rocky Mountain Front in Waterton Lakes National Park, Alberta Canada, consists of 30 discrete aspen stands (Populous tremuloides) which are encroaching on this declining shortgrass fescue …

Spatiotemporal Variability In Winter Severity: Consequences For White-Tailed Deer Populations And Habitat Sustainability, Grace Parikh

Dissertations, Master's Theses and Master's Reports

Winter in the northern Great Lakes presents a suite of challenging conditions for animals, in terms of limited food availability and increased energetic cost of locomotion and thermoregulation. Variable winter severity is liable to cause interannual fluctuations in habitat viability and use by animals, in addition to modulating physiological responses in animals to conserve energy. For example, white-tailed deer (Odocoileus virginianus) congregate at high densities under eastern hemlock (Tsuga canadensis) or northern white-cedar (Thuja occidentalis) stands, which provide forage, thermal cover, reduced snow depth, and enhanced vigilance. However, a suite of climatic, edaphic, and …

Biogeochemical Response To Vegetation And Hydrologic Change In An Alaskan Boreal Fen Ecosystem, Danielle L. Rupp

Dissertations, Master's Theses and Master's Reports

Boreal peatlands store approximately one third of the earth’s terrestrial carbon, locked away in currently waterlogged and frozen conditions. Peatlands of boreal and arctic ecosystems are affected increasingly by shifting hydrology caused by climate change. The consequences of these relatively rapid ecosystem changes on carbon cycling between the landscape and the atmosphere could provide an amplifying feedback to climate warming. Alternatively, the advancement of terrestrial vegetation into once waterlogged soils could uptake carbon as a sink. Previous work suggests that fens will become an increasingly dominant landscape feature in the boreal. However, studies investigating fens, their response to hydrologic and …

Plant Community Response To Novel Silvicultural Treatments In Great Lakes Northern Hardwoods, Stefan F. Hupperts

Dissertations, Master's Theses and Master's Reports

The objective of this dissertation is to assess plant community response across a range of silvicultural disturbances and test ecological hypotheses to better inform ecologists and forest managers. To provide context for the utility of revising silvicultural systems, I review natural disturbance regimes and historical practices that have shaped contemporary Great Lakes northern hardwood forests (Chapter 2). Further, I identify important ways to expand the silvicultural toolbox and better emulate natural disturbance regimes. Building on this theoretical underpinning, I investigate the initial regeneration and plant community response to two novel silvicultural experiments: the Northern Hardwood Experiment for Enhancing Diversity (NHSEED) …

On Neglected Taxa: Protostomes And The Evolution Of Myelination, Michaella P. Andrade, Charles Morphy D. Santos

Animal Sentience

Understanding the evolution of nervous and sensory systems in animals is key to understanding the distribution of animal sentience. However, the use of model organisms – mostly vertebrates, and especially mammals – often biases comparative analyses. Sneddon et al. (2018a,b) point out that using nonhuman animals as models helps us better understand the multifaceted aspects of animal pain and sentience. Several concerns need to be considered in dealing with model organisms. Here we discuss how models that are unrepresentative phylogenetically influence hypotheses about the evolution of the myelination in animals. Greater effort is needed to escape “vertebrate-centrism” in evolutionary research.