Open Access. Powered by Scholars. Published by Universities.®

Ecology and Evolutionary Biology Commons™

Open Access. Powered by Scholars. Published by Universities.®

2019

Discipline
Institution
Keyword
Publication
Publication Type
File Type

Articles 931 - 960 of 1118

Full-Text Articles in Ecology and Evolutionary Biology

Production And Ecosystem Structure In Cold‐Core Vs. Warm‐Core Eddies: Implications For The Zooplankton Isoscape And Rock Lobster Larvae, Anya M. Waite, Eric Raes, Lynnath E. Beckley, Peter A. Thompson, David Griffin, Megan Saunders, Christin Sawstrom, Richard O'Rorke, Miao Wang, Jason P. Landrum, Andrew Jeffs Jan 2019

Production And Ecosystem Structure In Cold‐Core Vs. Warm‐Core Eddies: Implications For The Zooplankton Isoscape And Rock Lobster Larvae, Anya M. Waite, Eric Raes, Lynnath E. Beckley, Peter A. Thompson, David Griffin, Megan Saunders, Christin Sawstrom, Richard O'Rorke, Miao Wang, Jason P. Landrum, Andrew Jeffs

Research outputs 2014 to 2021

Anticyclonic (warm-core) mesoscale eddies (WCEs) in the Eastern Indian Ocean carry higher surface chlorophyll signatures than cyclonic (cold-core) eddies (CCEs). Paradoxically, WCEs host rock lobster larvae (phyllosomas) with lower lipid stores and protein reserves than phyllosomas in CCEs, suggesting a poorer nutritional status. We assess primary productivity and zooplankton isotopic data from eight eddies across four research voyages (2003–2011) to determine how this contradiction might occur. We find that WCEs and CCEs are equally productive per unit chlorophyll a, but depth-integrated primary production (PP) is greater in eddies with shallower mixed layers (MLs), especially in CCEs. MLs tend to be …


Population Health Of Spotted Salamanders (Ambystoma Maculatum) In Created Vernal Pools: An Integrative Approach, Alice R. Millikin Jan 2019

Population Health Of Spotted Salamanders (Ambystoma Maculatum) In Created Vernal Pools: An Integrative Approach, Alice R. Millikin

Graduate Theses, Dissertations, and Problem Reports (ETD)

Habitat creation is an important tool for conservation to counteract habitat loss and degradation. Vernal pools are susceptible to destruction due to limited detection, protection, and regulation. These wetlands provide fishless breeding habitat for many amphibian species including spotted salamanders (Ambystoma maculatum) in eastern North America. Determining whether created vernal pool habitat is successful is often determined by demographic data of colonizing populations. I suggest that hormone levels, population genetics, and disease prevalence can improve our understanding of population health in created habitat. The goal of this dissertation was to assess the health of spotted salamander larvae in …


Targeted Short-Term Nutrient Reduction To Manage Ventenata Dubia An Invasive Winter Annual Grass: Soil And Plant Responses, Jaren F. Lamm Jan 2019

Targeted Short-Term Nutrient Reduction To Manage Ventenata Dubia An Invasive Winter Annual Grass: Soil And Plant Responses, Jaren F. Lamm

EWU Masters Thesis Collection

Invasive winter annual grasses, IWAGs, have degraded extensive ecosystems around the world and continue to invade new ones yearly. IWAGs readily form large monocultures or near monocultures, thus management and restoration goals largely focus on maintaining or increasing plant diversity in impacted ecosystems. Unfortunately, common management methods also reduce native plant diversity and harm the soil microbiome. These effects require additional measures to be taken, like reseeding, and plant diversity is still usually well below remnant targets. Early season short-term nutrient reduction to manage IWAGs is largely unexplored and would potentially decrease IWAG abundance, active earlier than most plants, but …


Tiger Sharks Eat Songbirds: Reply, J. Marcus Drymon, K. Feldheim, A. M.V. Fournier, A. E. Jefferson, A. M. Kroetz, Sean P. Powers, E. A. Seubert Jan 2019

Tiger Sharks Eat Songbirds: Reply, J. Marcus Drymon, K. Feldheim, A. M.V. Fournier, A. E. Jefferson, A. M. Kroetz, Sean P. Powers, E. A. Seubert

University Faculty and Staff Publications

In response to our recent paper (Drymon et al. 2019), Yosef (2019) questions the mechanism proposed to explain interactions between tiger sharks (Galeocerdo cuvier) and migratory songbirds, while offering an alternative mechanism based on a single observation. We appreciate the comments from Yosef and the opportunity to respond.


Description Of A New Species Of Melanesiandra Santos-Silva Et Al. (Coleoptera: Cerambycidae: Parandrinae) Found In Vanuatu, Shunsuke Kakinuma Jan 2019

Description Of A New Species Of Melanesiandra Santos-Silva Et Al. (Coleoptera: Cerambycidae: Parandrinae) Found In Vanuatu, Shunsuke Kakinuma

Insecta Mundi

Melanesiandra anatomensis Kakinuma, new species (Coleoptera: Cerambycidae: Parandrinae), found in Aneityum Island (Vanuatu), is described and illustrated. An updated key is presented to separate the six known species of the genus.


Descripción De Una Especie Nueva Y Dos Nuevos Registros De Paraleurolobus Sampson Y Drews (Hemiptera: Aleyrodidae) De Guatemala, José Francisco García Ochaeta, Oscar Ángel Sánchez-Flores Jan 2019

Descripción De Una Especie Nueva Y Dos Nuevos Registros De Paraleurolobus Sampson Y Drews (Hemiptera: Aleyrodidae) De Guatemala, José Francisco García Ochaeta, Oscar Ángel Sánchez-Flores

Insecta Mundi

Se describe Paraleurolobus evansi García-Ochaeta y Sánchez-Flores sp. nov. (Hemiptera: Aleyrodidae) de Guatemala. Se comentan los caracteres diferenciales de esta especie con sus congéneres. Se incluye una clave para determinar las especies de Paraleurolobus Sampson y Drews, y se reportan por primera vez para Guatemala a P. chamaedoreae Russell y P. imbricatus Sampson y Drews.

Paraleurolobus evansi García-Ochaeta y Sánchez-Flores sp. nov. (Hemiptera: Aleyrodidae) is described from Guatemala. Differential characters between this and related species are discussed. A key is included to identify Paraleurolobus Sampson y Drews species, and P. chamaedoreae Russell and P. imbricatus Sampson y Drews are reported …


New Tribes, Overview And Checklist Of Neotropical Cladonotinae (Orthoptera: Caelifera: Tetrigidae), Daniela Santos Martins Silva, Oscar J. Cadena-Castañeda, Marcelo Ribeiro Pereira, Fernando Campos De Domenico, Carlos Frankl Sperber Jan 2019

New Tribes, Overview And Checklist Of Neotropical Cladonotinae (Orthoptera: Caelifera: Tetrigidae), Daniela Santos Martins Silva, Oscar J. Cadena-Castañeda, Marcelo Ribeiro Pereira, Fernando Campos De Domenico, Carlos Frankl Sperber

Insecta Mundi

The Cladonotinae (Orthoptera: Caelifera: Tetrigidae) are a peculiar tetrigid taxon characterized by a relatively widened fascial carina on the frontal costa. This group currently has a doubtful taxonomic status since this is the only character shared by its members. Here, we provide an overview of the Cladonotinae reported from the Neotropical region (29 species, three of them fossils), based on the morphological examination of the specimens housed at several museums. We show that Neotropical Cladonotinae share more characteristics, which strengthen its taxonomic status, and propose two new tribes: Choriphyllini n. trib. and Mucrotettigini n. trib. We propose the new combination …


Onciderini Thomson, 1860 (Coleoptera: Cerambycidae: Lamiinae) Types Of The Museum Für Naturkunde - Leibniz Institute For Evolution And Biodiversity Science, Berlin (Zmhb), Eugenio H. Nearns, Francisco E. De L. Nascimento Jan 2019

Onciderini Thomson, 1860 (Coleoptera: Cerambycidae: Lamiinae) Types Of The Museum Für Naturkunde - Leibniz Institute For Evolution And Biodiversity Science, Berlin (Zmhb), Eugenio H. Nearns, Francisco E. De L. Nascimento

Insecta Mundi

The primary types of Onciderini Thomson, 1860 (Coleoptera: Cerambycidae: Lamiinae) of the Museum für Naturkunde - Leibniz Institute for Evolution and Biodiversity Science, Berlin (ZMHB), Germany, are catalogued and illustrated. Data on the original combination, current name, gender, and type locality are verified and presented. There are 16 primary types of Onciderini including four in Oncideres Lacordaire, 1830 and three in Trestonia Buquet, 1859. Of the 16 primary types, seven were described by Ubirajara R. Martins, four by Wilhelm Ferdinand Erichson, and three by Ernst Friedrich Germar.


New Data On The Taxonomy And Distribution Of Philippine Ochodaeidae And Description Of A New Species From Central Visayas (Coleoptera: Scarabaeoidea), Jean-Bernard Huchet Jan 2019

New Data On The Taxonomy And Distribution Of Philippine Ochodaeidae And Description Of A New Species From Central Visayas (Coleoptera: Scarabaeoidea), Jean-Bernard Huchet

Insecta Mundi

The status of the taxon Ceratochodaeus Huchet, 2017 (Coleoptera: Scarabaeoidea), initially described as a subgenus of Nothochodaeus Nikolajev, 2005, is reconsidered and raised to generic level. New information on the distribution of Ceratochodaeus eliotti (Huchet, 2014), new combination, in the Philippine archipelago is provided. Ceratochodaeus darlingi Huchet, a new species from Negros island, Central Visayas (region VII), is described and illustrated.


The Exotic Agrilus Cyanescens (Ratzeburg) (Coleoptera: Buprestidae) Is Discovered In Oregon, Richard L. Westcott, Wyatt Williams, Amy Grotta Jan 2019

The Exotic Agrilus Cyanescens (Ratzeburg) (Coleoptera: Buprestidae) Is Discovered In Oregon, Richard L. Westcott, Wyatt Williams, Amy Grotta

Insecta Mundi

In two separate occurrences, graduates of the Oregon Forest Pest Detector program discovered the exotic Agrilus cyanescens (Ratzeburg) (Coleoptera: Buprestidae) in Portland, Oregon, damaging a backyard shrub, Lonicera involucrata (Rich.) Banks ex Spreng. (Caprifoliaceae). Although first detected in the USA 99 years ago, the known occurrence nearest to Oregon is in Utah.


New Larval Host Records For Tortricidae (Lepidoptera) From An Ecuadorian Andean Cloud Forest, John W. Brown, Lee A. Dyer, Santiago Villamarin-Cortez, Danielle Salcido Jan 2019

New Larval Host Records For Tortricidae (Lepidoptera) From An Ecuadorian Andean Cloud Forest, John W. Brown, Lee A. Dyer, Santiago Villamarin-Cortez, Danielle Salcido

Insecta Mundi

A biological inventory focused on plant-caterpillar-parasitoid associations at Yanayacu Biological Station, Ecuador, yielded 81 adult specimens of Tortricidae (Lepidoptera: Tortricoidea) representing 42 species in 13 genera. Based on this material, new host records are presented for species in the following genera: Lypothora Razowski, 1981; Inape Razowski, 1988; Orthocomotis Dognin, 1905; Paraptila Meyrick, 1912; Runtunia Razowski and Wojtusiak, 2008; Transtillaspis Razowski, 1987; Xoser Razowski and Pelz, 2003; Argyrotaenia Stephens, 1852; Anacrusis Zeller, 1877; Sisurcana Powell, 1986; Amorbia Clemens, 1860; Paramorbia Powell and Lambert, 1986; and Episimus Walsingham, 1892. Tortricids were reared from 46 plant species representing 24 plant families, with Piperaceae, …


First Record Of Xysma Dominicum Antropov, 1995 (Hymenoptera: Pemphredonidae) In Puerto Rico, The Antilles, And Notes On The Nesting Behavior, Julio A. Genaro Jan 2019

First Record Of Xysma Dominicum Antropov, 1995 (Hymenoptera: Pemphredonidae) In Puerto Rico, The Antilles, And Notes On The Nesting Behavior, Julio A. Genaro

Insecta Mundi

Xysma dominicum Antropov (Hymenoptera: Pemphredonidae) is recorded for the first time in Puerto Rico. It was found nesting in vertical banks in dry forest habitat in Guánica, Ponce. Notes about the nesting behavior are presented. The female, previously unknown, is described and illustrated.

Se registra por primera vez a Xysma dominicum Antropov (Hymenoptera: Pemphredonidae) para Puerto Rico. La especie fue encontrada nidificando en paredes verticales, en el bosque seco de Guánica, Ponce. Se presentan notas sobre la conducta de nidificación. Se describe e ilustra a la hembra, previamente desconocida.


Nomenclatural Changes In American Apomecynini Including Description Of New Genera And Species (Coleoptera: Cerambycidae), Antonio Santos-Silva, Francisco E. De L. Nascimento, James E. Wappes Jan 2019

Nomenclatural Changes In American Apomecynini Including Description Of New Genera And Species (Coleoptera: Cerambycidae), Antonio Santos-Silva, Francisco E. De L. Nascimento, James E. Wappes

Insecta Mundi

Nomenclatural and taxonomic changes are proposed for American Apomecynini (Coleoptera: Cerambycidae: Lamiinae). New synonymies: Parmenonta valida Thomson, 1868, type species of Parmenonta Thomson, 1868, is transferred to Adetus LeConte, 1852, making obligatory the synonymy of Parmenonta with Adetus; Adetus cylindricus Bates, 1866 = A. inaequalis (Thomson, 1868); Adetus leucostigma Bates, 1880 = Adetus binotatus (Thomson, 1868); Adetus tuberosus Galileo and Martins, 2003 = Typophaula melancholica Thomson, 1868; Adetus latericius Belon, 1902, and Adetus irregularis (Breuning, 1939) = Adetus nanus (Fairmaire and Germain, 1859). New records: Adetus binotatus for Chiapas, Guerrero, Tamaulipas, and Quintana Roo (Mexico), new state records; A. …


The Diptera Of Panama. I. Annotated Catalog Of The Tipulomorpha Of Panama, Brian J. Armitage, Tomas A. Rios Gonzalez Jan 2019

The Diptera Of Panama. I. Annotated Catalog Of The Tipulomorpha Of Panama, Brian J. Armitage, Tomas A. Rios Gonzalez

Insecta Mundi

There are 214 species of the suborder Tipulomorpha (Diptera) known from Panama. Of these, 162 species were described by the noted American entomologist, Charles Paul Alexander, from Panama during the period from 1912 through 1979. Panama hosts two of the four families found within the Tipulomorpha: Limoniidae (197 species) and Tipulidae (17 species). We have records of only three species from multiple provinces (n = 2) within Panama and 211 species from just one province. The vast majority of the latter are known from a single location within their respective provinces. There are 142 endemic species (66.4%) included in …


Eraina Chelifera, Nueva Especie Chilena De La Familia Autostichidae (Lepidoptera: Gelechioidea), Francisco Urra Jan 2019

Eraina Chelifera, Nueva Especie Chilena De La Familia Autostichidae (Lepidoptera: Gelechioidea), Francisco Urra

Insecta Mundi

Se describe una nueva especie del género Eraina Clarke, 1978 (Lepidoptera: Autostichidae), Eraina chelifera nov. sp., a partir de ejemplares recolectados en la zona central de Chile. Se presentan caracteres de diagnóstico para la especie, fotografías del adulto e ilustraciones de las estructuras genitales del macho y la hembra.

A new species of the genus Eraina Clarke, 1978 (Lepidoptera: Autostichidae), Eraina chelifera nov. sp., is described from specimens collected in central Chile. Diagnostic characters for the species are presented; photographs of the adult and illustrations of male and female genitalia are provided.


Additions To The Plume Moth Fauna Of The Bahamas (Lepidoptera: Pterophoridae) With Description Of Four New Species, Deborah L. Matthews, Jacqueline Y. Miller, Mark J. Simon, Gary Goss Jan 2019

Additions To The Plume Moth Fauna Of The Bahamas (Lepidoptera: Pterophoridae) With Description Of Four New Species, Deborah L. Matthews, Jacqueline Y. Miller, Mark J. Simon, Gary Goss

Insecta Mundi

Records of Bahamas plume moths (Lepidoptera: Pterophoridae) collected since 2011 are summarized and four new species described: Michaelophorus salensis Matthews, new species, Oidaematophorus androsensis Matthews, new species, Hellinsia bahamensis Matthews, new species, and Hellinsia lucayana Matthews, new species. Species accounts including illustrations of adults and genitalia, diagnoses, larval hosts, habitats, and distributions are provided. Of the 23 species found, new larval host associations are reported for two species while the life histories remain unknown for seven species.


New Species Of Ochodaeus Dejean From Madagascar Ii (Coleoptera: Scarabaeoidea: Ochodaeidae), M. J. Paulsen Jan 2019

New Species Of Ochodaeus Dejean From Madagascar Ii (Coleoptera: Scarabaeoidea: Ochodaeidae), M. J. Paulsen

Insecta Mundi

Three new species of Ochodaeus Dejean (Coleoptera: Scarabaeoidea: Ochodaeidae) from Madagascar are described that have a strongly granulate pronotum and, unlike all previously described species from the country, possess a clypeal tubercle or minute horn: O. meridialis, O. umbonulus, and O. iniquipes. An update to the key to the species of Ochodaeus from Madagascar is provided.


Three New Tiger Beetle Species Of The Genus Prothyma Hope, 1838, Subgenus Genoprothyma Rivalier, 1964 (Coleoptera: Cicindelidae) Described From Myanmar. 152. Contribution Towards The Knowledge Of The Cicindelidae, Jürgen Wiesner, Moe Hnin Phyu, Michio Hori Jan 2019

Three New Tiger Beetle Species Of The Genus Prothyma Hope, 1838, Subgenus Genoprothyma Rivalier, 1964 (Coleoptera: Cicindelidae) Described From Myanmar. 152. Contribution Towards The Knowledge Of The Cicindelidae, Jürgen Wiesner, Moe Hnin Phyu, Michio Hori

Insecta Mundi

Prothyma (Genoprothyma) thandamoeae Wiesner, Phyu and Hori, new species, Prothyma (Genoprothyma) sotai Wiesner, Phyu and Hori, new species, and Prothyma (Genoprothyma) asamii Wiesner, Phyu and Hori, new species (Coleoptera: Cicindelidae) are described from Myanmar. A key to all members of the genus known to occur in Myanmar is given.


Synonymies, A New Combination, And Four New Species In Amphicnaeia Bates (Coleoptera: Cerambycidae: Lamiinae), James E. Wappes, Antonio Santos-Silva, Maria Helena M. Galileo Jan 2019

Synonymies, A New Combination, And Four New Species In Amphicnaeia Bates (Coleoptera: Cerambycidae: Lamiinae), James E. Wappes, Antonio Santos-Silva, Maria Helena M. Galileo

Insecta Mundi

Four new species in the genus Amphicnaeia (Coleoptera: Cerambycidae: Lamiinae) are described: A. panamensis Wappes, Santos-Silva and Galileo and A. fuscofasciata Wappes, Santos-Silva and Galileo from Panama; A. bezarki Wappes, Santos-Silva and Galileo from Venezuela; and A. rileyi Wappes, Santos-Silva and Galileo from Costa Rica and Panama. Amphicnaeia affinis Breuning, 1940 is placed in synonymy with A. lineata Bates, 1866, and the species newly recorded from the Brazilian state of Minas Gerais. Amphicnaeia cordigera Aurivillius, 1920 is transferred to Rosalba Thomson, 1864, resulting in a new combination, and Rosalba rufescens Breuning, 1940, is found to be a junior synonym of …


Descriptions Of Two New Elateroid Beetles (Coleoptera: Eucnemidae, Elateridae) From Burmese Amber, Robert L. Otto Jan 2019

Descriptions Of Two New Elateroid Beetles (Coleoptera: Eucnemidae, Elateridae) From Burmese Amber, Robert L. Otto

Insecta Mundi

Two new elateroid taxa are described from amber deposits excavated from the northern region of Myanmar. Two genera, Cenomana gen. nov. (Coleoptera: Eucnemidae), and Cretopityobius gen. nov. (Coleoptera: Elateridae) are described for the first time from Burmese amber. The following new species are described: Cenomana clavata sp. nov. and Cretopityobius pankowskiorum sp. nov. Each new species is diagnosed and illustrated.


The Trichoptera Of Panama. Xii. Contributions To The Family Glossosomatidae (Insecta: Trichoptera) In Panama, Roger J. Blahnik, Brian J. Armitage Jan 2019

The Trichoptera Of Panama. Xii. Contributions To The Family Glossosomatidae (Insecta: Trichoptera) In Panama, Roger J. Blahnik, Brian J. Armitage

Insecta Mundi

Herein we describe five new species in the trichopteran family Glossosomatidae Wallengren (Insecta: Trichoptera) from Panama: Mortoniella calovebora Blahnik and Armitage, n. sp., M. yayas Blahnik and Armitage, n. sp., Protoptila inflata Blahnik and Armitage, n. sp., P. totumas Blahnik and Armitage, n. sp., and P. rambala Blahnik and Armitage, n. sp. Three of the species were collected as part of ongoing biological surveys of Panama’s national parks. We also record three new country records for Panama for this family: Culoptila costaricensis Flint, 1974, Mortoniella opinionis Blahnik and Holzenthal, 2008, and Protoptila spirifera Flint, 1974. Thirty-one …


Fall Field Report, August - November 2019, W. Ross Silcock Jan 2019

Fall Field Report, August - November 2019, W. Ross Silcock

Nebraska Bird Review

By far the most striking feature of this fall’s report is the large number of lingering migrants, a trend that is continuing and apparently increasing, especially among passerines. Editor Jan Paseka counted 17 uses of the word “tardy” and 43 of “late” or “latest”. It is tempting to relate this to the warmer environment and resulting increased availability of food items at higher latitudes and later dates than in previous years. A sad note: a startling occurrence in Gering, Scotts Bluff 20 Aug was described by Marie Smith: “We had a huge hailstorm around 10:30. The hail was probably pea …


Diurnal Habitat Selection Of Migrating Whooping Crane In The Great Plains, David M. Baasch, Patrick D. Farrell, Aaron T. Pearse, David A. Brandt, Andrew J. Caven, Mary J. Harner, Greg D. Wright, Kristine L. Metzger Jan 2019

Diurnal Habitat Selection Of Migrating Whooping Crane In The Great Plains, David M. Baasch, Patrick D. Farrell, Aaron T. Pearse, David A. Brandt, Andrew J. Caven, Mary J. Harner, Greg D. Wright, Kristine L. Metzger

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

Available stopover habitats with quality foraging opportunities are essential for migrating waterbirds, including Whooping Crane (Grus americana). Several studies have evaluated habitats used by Whooping Crane for roosting throughout its migration corridor; however, habitats associated with foraging and other diurnal activities have received less attention. We used data collected from 42 Whooping Crane individuals that included 2169 diurnal use locations within 395 stopover sites evaluated during spring 2013 to fall 2015 to assess diurnal habitat selection throughout the U.S. portion of the migration corridor. We found that Whooping Crane selected wetland land-cover types (i.e., open water, riverine, and semipermanent wetlands) …


Mortality In Aransas-Wood Buffalo Whooping Cranes: Timing, Location, And Causes, Aaron T. Pearse, David A. Brandt, Barry K. Hartup, Mark T. Bidwell Jan 2019

Mortality In Aransas-Wood Buffalo Whooping Cranes: Timing, Location, And Causes, Aaron T. Pearse, David A. Brandt, Barry K. Hartup, Mark T. Bidwell

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

The Aransas-Wood Buffalo Population (AWBP) of Whooping Cranes (Grus americana) has experienced a population growth rate of approximately 4% for multiple decades (Butler et al., 2014a; Miller et al., 1974). Population growth for long-lived species of birds is generally highly sensitive to variation in adult mortality rates (Sæther and Bakke, 2000). A population model for endangered Red-crowned Cranes (Grus japonensis) in Japan conforms to this pattern, where growth rate is most sensitive to adult mortality (Masatomi et al., 2007). Earlier analyses observed that the AWBP growth rate increased in the mid-1950s and that this increase was likely caused by reduced …


U.S. Geological Survey- Northern Prairie Wildlife Research Center 2017 Research Activity Report, Mark H. Sherfy Jan 2019

U.S. Geological Survey- Northern Prairie Wildlife Research Center 2017 Research Activity Report, Mark H. Sherfy

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

Contents

Acknowledgments...............................................................................iii

Center Mission and Science Strategy...............................................................1

Lines of Work..................................................................................2

Study Narratives.................................................................................16


The Prevotella Copri Complex Comprises Four Distinct Clades Underrepresented In Westernized Populations, Adrian Tett, Kun D. Huang, Francesco Asnicar, Hannah Fehlner-Peach, Edoardo Pasolli, Nicolai Karcher, Federica Armanini, Paolo Manghi, Kevin Bonham, Moreno Zolfo, Francesca De Filippis, Cara Magnabosco, Richard Bonneau, John Lusingu, John Amuasi, Karl Reinhard, Thomas Rattei, Fredrik Boulund, Lars Engstrand, Albert Zink, Maria Carmen Collado, Dan R. Littman, Daniel Eibach, Danilo Ercolini, Omar Rota-Stabelli, Curtis Huttenhower, Frank Maixner, Nicola Segata Jan 2019

The Prevotella Copri Complex Comprises Four Distinct Clades Underrepresented In Westernized Populations, Adrian Tett, Kun D. Huang, Francesco Asnicar, Hannah Fehlner-Peach, Edoardo Pasolli, Nicolai Karcher, Federica Armanini, Paolo Manghi, Kevin Bonham, Moreno Zolfo, Francesca De Filippis, Cara Magnabosco, Richard Bonneau, John Lusingu, John Amuasi, Karl Reinhard, Thomas Rattei, Fredrik Boulund, Lars Engstrand, Albert Zink, Maria Carmen Collado, Dan R. Littman, Daniel Eibach, Danilo Ercolini, Omar Rota-Stabelli, Curtis Huttenhower, Frank Maixner, Nicola Segata

Karl Reinhard Publications

Prevotella copri is a common human gut microbe that has been both positively and negatively associated with host health. In a cross-continent metaanalysis exploiting >6,500 metagenomes, we obtained >1,000 genomes and explored the genetic and population structure of P. copri. P. copri encompasses four distinct clades (>10% inter-clade genetic divergence) that we propose constitute the P. copri complex, and all clades were confirmed by isolate sequencing. These clades are nearly ubiquitous and co-present in non-Westernized populations. Genomic analysis showed substantial functional diversity in the complex with notable differences in carbohydrate metabolism, suggesting that multi-generational dietary modifications may be …


Imaging Coprolite Taphonomy And Preservation, Karl Reinhard, Morgana Camacho, Breyden Geyer, Samantha Hayek, Chase Horn, Kaitlin Otterson, Julia Russ Jan 2019

Imaging Coprolite Taphonomy And Preservation, Karl Reinhard, Morgana Camacho, Breyden Geyer, Samantha Hayek, Chase Horn, Kaitlin Otterson, Julia Russ

Karl Reinhard Publications

The impact of coprolite taphonomy on parasite remains and aDNA recovery has been recognized. In general, coprolites from sites protected by geologic features such as caves and rock shelters exhibit the best preservation. In contrast, coprolites from open sites can be badly affected by taphonomic processes as shown by analyses of parasite eggs. For eggs, the impact of mites and free living nematodes has been quantified. Mites are associated with poor pinworm egg preservation. In other studies, percolation of water through sediments has a negative impact on egg recovery. We note that dietary remains can also decompose at open sites. …


Novel Information On The Morphology, Phylogeny And Distribution Of Camallanid Mematodes From Marine And Freshwater Hosts In South Africa, Including The Description Of Camallanus Sodwanaensis N. Sp., Roman Svitin, Marliese Truter, Olena Kudlai, Nico J. Smit, Louis Du Preez Jan 2019

Novel Information On The Morphology, Phylogeny And Distribution Of Camallanid Mematodes From Marine And Freshwater Hosts In South Africa, Including The Description Of Camallanus Sodwanaensis N. Sp., Roman Svitin, Marliese Truter, Olena Kudlai, Nico J. Smit, Louis Du Preez

Harold W. Manter Laboratory of Parasitology: Library Materials

Four species of previously known nematodes from the family Camallanidae were found from different hosts in South Africa: Batrachocamallanus xenopodis from the frog Xenopus muelleri, Paracamallanus cyathopharynx, and Procamallanus pseudolaeviconchus from the catfish Clarias gariepinus and Spirocamallanus daleneae from the catfish Synodontis zambezensis. In the material collected from various marine fishes, several specimens of nematodes from the genus Camallanus clearly differed from all previously known species. Based on morphological differences these specimens are assigned to a new species, C. sodwanaensis. Molecular data of 18S and 28S rDNA and COI sequences are provided for the collected species …


Conceptualizing Ecological Responses To Dam Removal: If You Remove It, What’S To Come?, J. Ryan Bellmore, G. R. Press, Jeffrey J. Duda, Jim E. O'Connor, Amy E. East, Melissa M. Foley, Andrew C. Wilcox, Jon J. Major, Patrick Shafroth, Sarah A. Morley, Christopher S. Magirl, Chauncey W. Anderson, James E. Evans, Laura Shawn Craig Jan 2019

Conceptualizing Ecological Responses To Dam Removal: If You Remove It, What’S To Come?, J. Ryan Bellmore, G. R. Press, Jeffrey J. Duda, Jim E. O'Connor, Amy E. East, Melissa M. Foley, Andrew C. Wilcox, Jon J. Major, Patrick Shafroth, Sarah A. Morley, Christopher S. Magirl, Chauncey W. Anderson, James E. Evans, Laura Shawn Craig

School of Earth, Environment and Society Faculty Publications

One of the desired outcomes of dam decommissioning and removal is the recovery of aquatic and riparian ecosystems. To investigate this common objective, we synthesized information from empirical studies and ecological theory into conceptual models that depict key physical and biological links driving ecological responses to removing dams. We define models for three distinct spatial domains: upstream of the former reservoir, within the reservoir, and downstream of the removed dam. Emerging from these models are response trajectories that clarify potential pathways of ecological transitions in each domain. We illustrate that the responses are controlled by multiple causal pathways and feedback …


A Bioeconomic Model For The Optimization Of Local Canine Rabies Control, Aaron Anderson, Johann Kotze, Stephanie A. Shwiff, Brody Hatch, Chris Slootmaker, Anne Conan, Darryn Knobel, Louis H. Nel Jan 2019

A Bioeconomic Model For The Optimization Of Local Canine Rabies Control, Aaron Anderson, Johann Kotze, Stephanie A. Shwiff, Brody Hatch, Chris Slootmaker, Anne Conan, Darryn Knobel, Louis H. Nel

United States Department of Agriculture Wildlife Services: Staff Publications

We present a new modeling tool that can be used to maximize the impact of canine rabies management resources that are available at the local level. The model is accessible through a web-based interface that allows for flexibility in the management strategies that can be investigated. Rabies vaccination, sterilization, chemo-contraception, and euthanasia can be specified and limited to specific demographic groups. Additionally, we allowed for considerable complexity in the specification of management costs. In many areas, the costs of contacting additional dogs increases as management effort increases, and this can have important strategic implications. We illustrated the application of the …