Ecology and Evolutionary Biology Commons^™

Leonardo And The Whale, Kay Etheridge

Biology Faculty Publications

Around 1480, when he was 28 years old, Leonardo da Vinci recorded what may have been a seminal event in his life. In writing of his travels to view nature he recounted an experience in a cave in the Tuscan countryside:

Having wandered for some distance among overhanging rocks, I can to the entrance of a great cavern... [and after some hesitation I entered] drawn by a desire to see whether there might be any marvelous thing within..."

[excerpt]

High Heat Tolerance Is Negatively Correlated With Upper Thermal Tolerance Plasticity In North Eastern Pacific Nudibranch Mollusks, Eric J. Armstrong, Richelle L. Tanner, Jonathon H. Stillman

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Rapid ocean warming may alter habitat suitability and population fitness for marine ectotherms. Susceptibility to thermal perturbations will depend in part on plasticity of a species’ upper thermal limits of performance (CT_max). However, we currently lack data regarding CT_max plasticity for several major marine taxa, including nudibranch mollusks, thus limiting predictive responses to habitat warming for these species. In order to determine relative sensitivity to future warming, we investigated heat tolerance limits (CT_max), heat tolerance plasticity (acclimation response ratio), thermal safety margins, temperature sensitivity of metabolism, and metabolic cost of heat shock in nine species …

Hawk On Wire: Ecopoems By Scott T. Starbuck, Vivian M. Hansen

The Goose

Review of Scott T. Starbuck’s Hawk on Wire: Ecopoems

Mind The Gap: Experimental Tests To Improve Efficacy Of Fladry For Nonlethal Management Of Coyotes, Julie K. Young, John P. Draper, Stewart Breck

Ecology Center Publications

Coyotes (Canis latrans) are the top predator of livestock in the contiguous United States. Developing more effective nonlethal tools to prevent coyote depredation will facilitate coexistence between livestock producers and coyotes. Fladry is a nonlethal deterrent designed to defend livestock by creating a visual barrier to wolves (C. lupus). Fladry may also be effective with coyotes, but large gap spacing between flags may reduce its efficacy. To address this issue, we performed 2 experiments on captive coyotes using fladry modified to reduce gap spacing at the U.S. Department of Agriculture, Predator Research Facility in Millville, Utah, …

Heterogeneity In Surface Sensing Suggests A Division Of Labor In Pseudomonas Aeruginosa Populations, Catherine R. Armbuster, Calvin K. Lee, Jessica Parker-Gilham, Jaime De Anda, Aiguo Xia, Kun Zhao, Keiji Murakami, Boo Shan Tseng, Lucas R. Hoffman, Fan Jin, Caroline S. Harwood, Gerard Cl Wong, Matthew R. Parsek

Life Sciences Faculty Research

The second messenger signaling molecule cyclic diguanylate monophosphate (c-di-GMP) drives the transition between planktonic and biofilm growth in many bacterial species. Pseudomonas aeruginosa has two surface sensing systems that produce c-di-GMP in response to surface adherence. Current thinking in the field is that once cells attach to a surface, they uniformly respond by producing c-di-GMP. Here, we describe how the Wsp system generates heterogeneity in surface sensing, resulting in two physiologically distinct subpopulations of cells. One subpopulation has elevated c-di-GMP and produces biofilm matrix, serving as the founders of initial microcolonies. The other subpopulation has low c-di-GMP and engages in …

Becoming The Good Shepherds, Eze Paez

Animal Sentience

It is very important that we clarify what we owe to nonhuman animals. To that end, we need a better understanding of animal cognition and emotion. Marino & Merskin’s target article is a welcome contribution to this project. Sheep, like most other animals, are sentient beings with interests of their own. It is wrong to discriminate against them based on species-membership or cognitive sophistication. We are morally required not to harm them, and to help them have the best possible lives, just as we would be in the case of human beings with similar interests. We must become the good …

Review Of Hottentotta Described By A. A. Birula, With Descriptions Of Two New Species And Comments On Birula’S Collection (Scorpiones: Buthidae), František Kovařík, Ersen Aydın Yağmur, Victor Fet

Euscorpius

The types of Hottentotta species described by A. A. Birula and deposited in the Zoological Institute, Russian Academy of Sciences, St. Petersburg, Russia are revised. The types of H. buchariensis (Birula, 1897), H. niloticus (Birula, 1928), H. penjabensis (Birula, 1897) stat. nov. and H. schach (Birula, 1905) are fully illustrated with color photographs of morphology. Their taxonomic position is discussed. Lectotypes are designated for H. niloticus and H. schach. We confirm synonymy of Buthus (Hottentotta) minax niloticus Birula, 1928 (Sudan) with Buthus minax L. Koch, 1875, syn. n. Two new species, Hottentotta juliae sp. n. from Iran …

Estimating Offsets For Avian Displacement Effects Of Anthropogenic Impacts, Jiill A. Shaffer, Charles R. Loesch, Deborah A. Buhl

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

Biodiversity offsetting, or compensatory mitigation, is increasingly being used in temperate grassland ecosystems to compensate for unavoidable environmental damage from anthropogenic developments such as transportation infrastructure, urbanization, and energy development. Pursuit of energy independence in the United States will expand domestic energy production. Concurrent with this increased growth is increased disruption to wildlife habitats, including avian displacement from suitable breeding habitat. Recent studies at energy-extraction and energy-generation facilities have provided evidence for behavioral avoidance and thus reduced use of habitat by breeding waterfowl and grassland birds in the vicinity of energy infrastructure. To quantify and compensate for this loss in …

Measuring Flowering Phenology And Its Consequences: A Systematic Review, Samantha M. Mangum

USF Tampa Graduate Theses and Dissertations

Despite growing interest in flowering phenology among ecologists, as reflected by an increase in the number of papers, there is little information on how studies typically measure and describe a plant’s flowering phenology. The focus of this study was the literature on flowering phenology and the approaches researchers have taken to quantify flowering phenology. Initially, a comprehensive description of the breath of literature on flowering phenology was produced. From there, I described the current research on flowering phenology: the year that the studies were published, the locations of the studies, and the particular biomes where the studies were performed. The …

Muscular Apoptosis But Not Oxidative Stress Increases With Old Age In A Long-Lived Diver, The Weddell Seal, Kaitlin N. Allen, Jose Pablo Vazquez-Medina, John M. Lawler, Jo-Ann E. Mellish, Markus Horning, Allyson G. Hindle

Life Sciences Faculty Research

Seals experience repeated bouts of ischemia–reperfusion while diving, potentially exposing their tissues to increased oxidant generation and thus oxidative damage and accelerated aging. We contrasted markers of oxidative damage with antioxidant profiles across age and sex for propulsive (longissismus dorsi) and maneuvering (pectoralis) muscles of Weddell seals to determine whether previously observed morphological senescence is associated with oxidative stress. In longissismus dorsi, old (age 17–26 years) seals exhibited a nearly 2-fold increase in apoptosis over young (age 9–16 years) seals. There was no evidence of age-associated changes in lipid peroxidation or enzymatic antioxidant profiles. In pectoralis, 4-hydroxynonenal-Lys (4-HNE-Lys) levels increased …

Culture-Based Analysis Of ‘Cave Silver’ Biofilms On Rocks In The Former Homestake Mine In South Dakota, Usa, Amanpreet K. Brar, David Bergmann

International Journal of Speleology

Tunnels in a warm, humid area of the 1478 m level of the Sanford Underground Research Facility (SURF), located in a former gold mine in South Dakota, USA, host irregular, thin whitish, iridescent biofilms, which appear superficially similar to ‘cave silver’ biofilms described from limestone and lava tube caves, despite the higher rock temperature (32°C) and differing rock surface (phyllite) present at SURF. In this study, we investigated the diversity of cultivable bacteria constituting the cave silver by using several media: CN agar, CN gellan gum and 0.1X R2A agar. The highest colony count (CFU/g of sample) was observed on …

Geographic Biases In Bee Research Limits Understanding Of Species Distribution And Response To Anthropogenic Disturbance, Mary A. Jamieson, Adrian L. Carper, Caleb J. Wilson, Virginia L. Scott, Jason Gibbs

Entomology Faculty Publications

Habitat loss and degradation due to agricultural intensification and urbanization are key threats facing wild pollinators, especially bees. However, data on the distribution and abundance of most of the world's 20,000+ bee species is lacking, making it difficult to assess the effects of anthropogenic disturbance through time. Moreover, there are geographic biases in the study of bees creating gaps in our understanding of species distributions and regional patterns of diversity. Research efforts are often focused around cities or field stations associated with universities and other research institutions. In this perspectives paper, we provide examples of geographic bias in knowledge regarding …

Extreme Site Fidelity As An Optimal Strategy In An Unpredictable And Homogeneous Environment, Brian D. Gerber, Mevin B. Hooten, Christopher P. Peck, Mindy B. Rice, James H. Gammonley, Anthony D. Apa, Amy J. Davis

United States Department of Agriculture Wildlife Services: Staff Publications

1. Animal site fidelity structures space use, population demography and ultimately gene flow. Understanding the adaptive selection for site fidelity patterns provides a mechanistic understanding to both spatial and population processes. This can be achieved by linking space use with environmental variability (spatial and temporal) and demographic parameters. However, rarely is the environmental context that drives the selection for site fidelity behaviour fully considered.

2. We use ecological theory to understand whether the spatial and temporal variability in breeding site quality can explain the site fidelity behaviour and demographic patterns of Gunnison sage‐grouse (Centrocercus minimus). We examined female site fidelity …

Ecological Effects Of Fear: How Spatiotemporal Heterogeneity In Predation Risk Influences Mule Deer Access To Forage In A Sky‐Island System, Christopher Lowrey, Kathleen M. Longshore, David M. Choate, Jyoteshwar R. Nagol, Joseph Sexton, Daniel Thompson

Life Sciences Faculty Research

Forage availability and predation risk interact to affect habitat use of ungulates across many biomes. Within sky‐island habitats of the Mojave Desert, increased availability of diverse forage and cover may provide ungulates with unique opportunities to extend nutrient uptake and/or to mitigate predation risk. We addressed whether habitat use and foraging patterns of female mule deer (Odocoileus hemionus) responded to normalized difference vegetation index (NDVI), NDVI rate of change (green‐up), or the occurrence of cougars (Puma concolor). Female mule deer used available green‐up primarily in spring, although growing vegetation was available during other seasons. Mule deer and cougar shared similar …

Rescue And Rehabilitation Of A Juvenile Red-Tailed Hawk: A Case Study, Maya Higa

Agricultural Education and Communication

Many raptor species are becoming threatened and, in some cases, endangered as a result of human activity including habitat destruction and pesticide use (Morishita, Fullerton, Lowenstine, Gardner & Brooks, 1998). Because of this, raptor rehabilitation has become increasingly popular in conservation efforts. In North America, the red-tailed hawk is one of the most widespread and commonly known birds of prey (Preston & Beane, 2009). According to the National Audubon Society, the conservation status of red-tailed hawks is currently of least concern and numbers may even be increasing in some areas since the 1960s. While this species is not threatened, the …

Spring Field Report, March - May 2019, W. Ross Silcock

Nebraska Bird Review

There were many significant reports, including high and low numbers, early and late dates, out-of-range sightings including nesting, and, of course, rarities. High numbers were led by geese; an amazing 1.7 million Snows were estimated by acreage (!) and counts of 10,000 Greater White-fronted and 100,000 Canada Geese were near-record high counts for spring. A bit surprising as record spring counts were 3000 European Starlings and 3000 American White Pelicans. Nightjar surveys by Nebraska Game and Parks Commission and others yielded an amazing 40+ Chuck-will’s-widows in the southeast; Ruddy Turnstones put on a show with 85 in Platte Co; 127 …

Review Of A Field Guide To The Natural World Of The Twin Cities By John J. Moriarty, Photography By Siah L. St. Clair, Douglas H. Johnson, Bonnie Sample

The Prairie Naturalist

A Field Guide to the Natural World of the Twin Cities has two foci: natural areas in the Twin Cities of Minnesota and the species that live in each. The geographical scope is the seven counties that envelop Minneapolis and Saint Paul. The author describes nine major habitat types that can be found there: prairie, savanna, big woods, oak woods, wetlands (marshes and swamps), fens and bogs, lakes, rivers, and urban and suburban. It is useful to know that “big woods” are not just woods that are large in extent, but woodlands that occur in Minnesota and western Wisconsin dominated …

Factors Affecting White Bass Abundance In Two Missouri River Reservoirs, William J. Radigan, Mark J. Fincel

The Prairie Naturalist

Annual angler harvest of white bass (Morone chrysops) increased from 1985–2005 in Lake Oahe and Lake Sharpe, two mainstem Missouri River reservoirs in South Dakota. In 2006, harvest rates dropped appreciably in both reservoirs and remained low through 2015. It is hypothesized that a confirmed 2005 columnaris disease outbreak led to reduced annual angler harvest of white bass from both reservoirs. Mean annual angler harvest prior to the outbreak (1985–2005) in Lake Oahe decreased 65% and in Lake Sharpe decreased 57% post outbreak (2006–2015). To assess potential causes of sustained decreased adult white bass abundance in the reservoirs, …

Nou Spring Field Days And Annual Meeting, Fairbury, May 17-19, 2019, Janis Paseka

Nebraska Bird Review

The NOU Annual Meeting and Spring Field Days, organized by Jan Johnson, was held in Fairbury on May 17-19, 2019, with 64 in attendance. Our meetings and meals took place in the 4-H building at the Jefferson County Fairgrounds. Despite the forecast for rain, the weather was perfect on Saturday morning, with rain arriving only in the late afternoon. Wind made listening for nightjars difficult on both evenings and it continued to be a problem on Sunday, but the total species list for the meeting was 165. Field trips were led by Shari Schwartz, John Carlini, Bill Flack, and Ross …

The Nebraska Bird Review, Volume 87 June 2019 Number 2

Nebraska Bird Review

Spring Field Report, March - May 2019, by W. Ross Silcock …42-61

Book Review: Sparrows of North America by Rick Wright, reviewed by W. Ross Silcock …62-65

NOU Spring Field Days and Annual Meeting in Fairbury, May 17-19, 2019, by Janis Paseka … 65

Subscription and Organization Information …71

Review Of Gulls Simplified: A Comparative Approach To Identification By Pete Dunne And Kevin T. Karlson, Garrett J. Macdonald

The Prairie Naturalist

The title of Pete Dunne and Kevin Karlson’s new book, Gulls Simplified, may seem like an oxymoron to many birders. Gulls are, after all, one of the most vexing groups of North American birds due to their myriad identification challenges, and many seasoned birders simply “don’t do gulls.” Indeed, Dunne, in the first line of the Introduction (page 13), writes, “Ask any bird-watcher to name the bird group that is most intimidating, and to a man, woman, and tour leader they often shout: GULLS!” The genesis of the book, and the authors’ approach to identification within, arises from the notion …

Incidental Captures Of Plains Spotted Skunks In Central South Dakota, Samantha Fino, Joshua D. Stafford, Aaron T. Pearse, Jonathan A. Jenks

The Prairie Naturalist

The plains spotted skunk (Spilogale putorius interrupta) had a historically broad distribution in the central United States, extending from the Mississippi River west to the Rocky Mountains. This subspecies of the eastern spotted skunk (S. putorius) has experienced population declines in recent decades possibly due to habitat loss and reduction of prey through conversion of grasslands and forests to croplands, as well as reductions in abandoned buildings, fence rows, creek bottoms, and wood piles throughout the region (Crabb 1948, Kaplan and Mead 1991, Gompper and Hackett 2005, Sasse 2017). Woody debris provides access to prey, and …

Amplicon Sequencing Of 42 Nuclear Loci Supports Directional Gene Flow Between South Pacific Populations Of A Hydrothermal Vent Limpet, Sophie Plouviez, Abigail Leavitt Labella, David W. Weisrock, F. A. Bastiaan Von Meijenfeldt, Bernard Ball, Joseph E. Neigel, Cindy L. Van Dover

Biology Faculty Publications

In the past few decades, population genetics and phylogeographic studies have improved our knowledge of connectivity and population demography in marine environments. Studies of deep‐sea hydrothermal vent populations have identified barriers to gene flow, hybrid zones, and demographic events, such as historical population expansions and contractions. These deep‐sea studies, however, used few loci, which limit the amount of information they provided for coalescent analysis and thus our ability to confidently test complex population dynamics scenarios.

In this study, we investigated population structure, demographic history, and gene flow directionality among four Western Pacific hydrothermal vent populations of the vent limpet Lepetodrilus …

Law Library Blog (June 2019): Legal Beagle's Blog Archive, Roger Williams University School Of Law

Law Library Newsletters/Blog

No abstract provided.

Dna And Protein Sequence Analysis Of Neuronal Markers Neuronal Nuclei (Neun) And Doublecortin (Dcx) In The Northern Pacific Rattlesnake (Crotalus Oreganus) And Western Fence Lizard (Sceloporus Occidentalis)., Brett M. Vassar

Master's Theses

Neuronal Nuclei (NeuN) and Doublecortin (DCX) are neuron specific proteins that are used in histological studies of brain structure in a variety of vertebrate taxa.Antibodies against NeuN (anti-NeuN) bind to the Fox-3 protein, an RNA binding protein common in mature neurons. Anti-DCX labels a microtubule-associated protein expressed in actively dividing neural progenitor cells and migrating neurons. The DCX gene encodes a protein that is well conserved across mammalian, avian, and a few reptilian species, therefore anti-DCX staining has been used successfully across a range of vertebrate taxa. Successful neuronal staining using anti-NeuN has been demonstrated in mammals, birds, and the …

Suitability Of Single-Pass Backpack Electrofishing To Estimate Fish Abundance And Describe Assemblage Structure In Prairie Streams, Morgan J. Kauth, David A. Schumann, Katie N.B. Graeb, William Wyatt Hoback

The Prairie Naturalist

Electrofishing is commonly used by fisheries professionals to assess fish assemblage structure and species abundance in streams. Accurate estimates of fish abundance and, consequently assemblage metrics, are typically generated with mark-recapture or maximum-likelihood depletion techniques, but doing so requires considerable sampling effort. Less intensive sampling approaches may be beneficial to fisheries managers, particularly in cases where frequent sampling of many streams is preferred. We used regression and Spearman rank-order correlation analyses to compare species catch rates and the assemblage metrics generated from single-pass electrofishing samples with multiple-pass depletion abundance estimates in Nebraska streams. We examined the influence of instream habitat …

The Prairie Naturalist, Volume 51, No. 1

The Prairie Naturalist

1 EDITOR’S NOTE

RESEARCH ARTICLES

3 Factors Affecting White Bass Abundance in Two Missouri River Reservoirs, William J. Radigan and Mark J. Fincel

17 Suitability of single-pass backpack electrofishing to estimate fish abundance and describe assemblage structure in prairie streams, Morgan J. Kauth, David A. Schumann, Katie N. B. Graeb, and W. Wyatt Hoback

NOTES

25 Channel Catfish Reproductive Traits in the Lower Platte River, Nebraska, USA - Mackenzie Zwiener, Jonathan Spurgeon, & Mark Pegg

30 Quantifying Signpost Usage By Captive Male White-Tailed Deer - Cassie L. Auxt, Eric S. Michel, and Jonathan A. Jenks.

33 Incidental Captures of Plains …

Channel Catfish Reproductive Traits In The Lower Platte River, Nebraska, Usa, Mackenzie Zwiener, Jonathan J. Spurgeon, Mark Pegg

The Prairie Naturalist

Reproductive traits including fecundity, egg diameter, and condition of freshwater fishes influence offspring survival and abundance and may provide insight regarding timing of reproduction (Winemiller and Rose 1992, Johnston and Leggett 2002). Fish size (i.e., length or weight) may influence the number of eggs produced by an individual female (i.e., fecundity; Michaletz 1998). Larger individuals may, thus, disproportionately contribute to year-classes through increased fecundity if egg and larval survival is similar or greater than those from smaller reproductive females (Gwinn et al. 2015). Likewise, maternal fish size may influence egg diameter and offspring survival, whereby larger egg diameters are associated …

Book Review: Sparrows Of North America By Rick Wright, W. Ross Silcock

Nebraska Bird Review

This book is a tour de force.

Not only is it a comprehensive summary of field identification, range, and taxonomy of species of the New World family Passerellidae, but the introductory paragraphs for each species, which describe the provenance of the English and Latin species names we know today, read like a historical novel that is a perfect vehicle for Wright to display his well-known erudition and could quite justifiably stand alone. Wright’s extensive research into often obscure places and sources that may be penetrated and interpreted only by one with his classical literary background is clear in these historical …

Assessing The Utility Of Conserving Evolutionary History, Caroline M. Tucker, Tracy Aze, Marc W. Cadotte, Juan L. Cantalapiedra, Chelsea Chisholm, Sandra Díaz, Richard Grenyer, Danwei Huang, Florent Mazel, William D. Pearse, Matthew W. Pennell, Marten Winter, Arne O. Mooers

Ecology Center Publications

It is often claimed that conserving evolutionary history is more efficient than species‐based approaches for capturing the attributes of biodiversity that benefit people. This claim underpins academic analyses and recommendations about the distribution and prioritization of species and areas for conservation, but evolutionary history is rarely considered in practical conservation activities. One impediment to implementation is that arguments related to the human‐centric benefits of evolutionary history are often vague and the underlying mechanisms poorly explored. Herein we identify the arguments linking the prioritization of evolutionary history with benefits to people, and for each we explicate the purported mechanism, and evaluate …