Ecology and Evolutionary Biology Commons^™

Invasive Phragmites Australis Management Outcomes And Native Plant Recovery Are Context Dependent, Christine B. Rohal, Chad R. Cranney, Eric L. G. Hazelton, Karin M. Kettenring

Ecology Center Publications

The outcomes of invasive plant removal efforts are influenced by management decisions, but are also contingent on the uncontrolled spatial and temporal context of management areas. Phragmites australis is an aggressive invader that is intensively managed in wetlands across North America. Treatment options have been understudied, and the ecological contingencies of management outcomes are poorly understood. We implemented a 5‐year, multi‐site experiment to evaluate six Phragmites management treatments that varied timing (summer or fall) and types of herbicide (glyphosate or imazapyr) along with mowing, plus a nonherbicide solarization treatment. We evaluated treatments for their influence on Phragmites and native plant …

Local‐Regional Similarity In Drylands Increases During Multiyear Wet And Dry Periods And In Response To Extreme Events, Matthew D. Petrie, D. P.C. Peters, N. D. Bruss, W. Ji, H. M. Savoy

Life Sciences Faculty Research

Climate change is predicted to impact ecosystems through altered precipitation (PPT) regimes. In the Chihuahuan Desert, multiyear wet and dry periods and extreme PPT pulses are the most influential climatic events for vegetation. Vegetation responses are most frequently studied locally, and regional responses are often unclear. We present an approach to quantify correlation of PPT and vegetation responses (as Normalized Difference Vegetation Index [NDVI]) at the Jornada ARS‐LTER site (JRN; 550 km2 area) and the surrounding dryland region (from 0 to 500 km distance; 400,000 km2 study area) as a way to understand regional similarity to locally observed patterns. We …

Springs Of The Arabian Peninsula: Historical Trends, Current Status And Human Impact In Saudi Arabia, Oman And Jordan, Kamal M. Aljohani

USF Tampa Graduate Theses and Dissertations

This research was conducted to update previous studies of the springs of the Arabian Peninsula (Saudi Arabia, Oman and Jordan). Approach: 76 springs were surveyed in between March and July 2018: 15 Saudi Arabia, 41 Oman and 20 Jordan to ascertain the current status, water quality and zooplankton benthos and fish communities. Investigation of the changes of biota and chemical parameters downstream from the springs source in Saudi Arabia. Results: Mercury exceeded the WHO and USEPA maximum contaminant level (MCL) in 63 of 76 springs, Aluminum exceeded MCL in 8 of 76 springs, and both were the common dissolved heavy …

Individual Based Model To Simulate The Evolution Of Insecticide Resistance, William B. Jamieson

Department of Mathematics: Dissertations, Theses, and Student Research

Insecticides play a critical role in agricultural productivity. However, insecticides impose selective pressures on insect populations, so the Darwinian principles of natural selection predict that resistance to the insecticide is likely to form in the insect populations. Insecticide resistance, in turn, severely reduces the utility of the insecticides being used. Thus there is a strong economic incentive to reduce the rate of resistance evolution. Moreover, resistance evolution represents an example of evolution under novel selective pressures, so its study contributes to the fundamental understanding of evolutionary theory.

Insecticide resistance often represents a complex interplay of multiple fitness trade-offs for individual …

The Effects Of Eating Unprocessed Foods, Gwen Peters, Meghan Sheridan, Caitlin Clack

Student Work

Some studies have shown that processed foods are “getting safer and the technologies used to produce them are only getting better.” Although this is a good claim, unprocessed foods still provide better social, environmental and economical resources to communities.

Scorpions Of The Horn Of Africa (Arachnida, Scorpiones). Part Xxii. Two New Species Of Neobuthus From Somaliland (Buthidae), František Kovařík

Euscorpius

New information about taxonomy and distribution of the genus Neobuthus Hirst, 1911 is presented, based on material recently collected in Somaliland. N. awashensis Kovařík & Lowe, 2012 is reported from Somaliland for the first time. Two new species are described, N. haeckeli sp. n. and N. solegladi sp. n. An updated distribution map of the genus Neobuthus is provided.

Radical Botany: Plants And Speculative Fiction [Table Of Contents], Natania Meeker, Antónia Szabari

Literature

No abstract provided.

The C-Fern (Ceratopteris Richardii) Genome: Insights Into Plant Genome Evolution With The First Partial Homosporous Fern Genome Assembly, D. Blaine Marchant, Emily B. Sessa, Paul G. Wolf, Kweon Heo, W. Brad Barbazuk, Pamela S. Soltis, Douglas E. Soltis

Ecology Center Publications

Ferns are notorious for possessing large genomes and numerous chromosomes. Despite decades of speculation, the processes underlying the expansive genomes of ferns are unclear, largely due to the absence of a sequenced homosporous fern genome. The lack of this crucial resource has not only hindered investigations of evolutionary processes responsible for the unusual genome characteristics of homosporous ferns, but also impeded synthesis of genome evolution across land plants. Here, we used the model fern species Ceratopteris richardii to address the processes (e.g., polyploidy, spread of repeat elements) by which the large genomes and high chromosome numbers typical of homosporous ferns …

Two New Species And Two New Combinations In Saphenista Walsingham, 1914 From Western North America (Lepidoptera: Tortricidae), John W. Brown

Insecta Mundi

Saphenista bartellae Brown, new species (TL: Colorado), and S. powelli Brown, new species (TL: California) (Lepidoptera: Tortricidae), are described and illustrated. Two other western North American species, S. latipunctana (Walsingham, 1879), new combination, and S. dilutana (Walsingham, 1879), new combination, are transferred to Saphenista based on morphology of the genitalia.

Thopeutica Petertaylori, A New Tiger Beetle Species (Coleoptera: Cicindelidae) From Mindanao, Philippines, Milton Norman D. Medina, Analyn A. Cabras, Jürgen Wiesner

Insecta Mundi

Thopeutica (Thopeutica) petertaylori Medina, Cabras and Wiesner (Coleoptera: Cicindelidae), new species, is described from the Cagan river, New Bataan, Mindanao. It is characterized by the metallic ground colour of the elytra, prominent middle tooth in the labrum, and bottle-shaped aedeagus with apical hook.

Ephemeroptera (Insecta) In Cuba, Carlos Naranjo L., Janice G. Peters, Pedro López Del Castillo

Insecta Mundi

Systematic, faunistic and ecological aspects of the six families and 34 species and subspecies in the order Ephemeroptera currently recorded from Cuba are reviewed based primarily on a reference collection located at the Universidad de Oriente (Santiago de Cuba), collections at the Institute of Ecology and Systematics (Havana) and historic literature. A key to nymphs is included with photographs of significant features of many species. An annotated list of species is presented with comments on type localities, species ecology and distribution. The morpho- ecological types of the nymphs are updated according to current taxonomic changes, and indicator species of organic …

Notes On The Natural History Of Plesioclytus Morrisi Wappes And Skelley, 2015 And Plesioclytus Relictus Giesbert, 1993 (Coleoptera: Cerambycidae), Kyle E. Schnepp

Insecta Mundi

The host plant and life history observations of Plesioclytus morrisi Wappes and Skelley and Plesioclytus relictus Giesbert (Coleoptera: Cerambycidae: Plesioclytini) are described for the first time. The host for both species is shown to be Polygonum polygamum Vent. (Polygonaceae). Observations also indicate that plants chosen for oviposition occur in open sand areas of scrub habitat.

Lepidoptera Pests Of Sapodilla (Manilkara Zapota (L.) Van Royen) In South Florida, With Some Comments On Life History And Natural Control, Jose I. Martinez, Jonathan H. Crane, Jeff Wasielewski, Jacqueline Y. Miller, Daniel Carrillo

Insecta Mundi

Sapodilla (Manilkara zapota (L.) van Royen) is originally from the Neotropics, and has become one of the most important tropical crops in the last few decades. The major producers include India, Mexico, Sri Lanka, the Philippines, Venezuela and Guatemala. It is also a minor crop in the United States, specifically South Florida. In 2015, it was reported that Florida growers suffered a loss of up to 80% of their production due to lepidopteran pests. We surveyed two sapodilla orchards weekly in South Florida for about six months. We collected 1,070 lepidopteran individuals (i.e., larvae, pupae and adults) belonging to seven …

Genus Olivensa Lane, 1965 In French Guiana, And Description Of A New Species (Coleoptera: Cerambycidae: Lamiinae), Pierre-Henri Dalens, Frédéric Robin

Insecta Mundi

Olivensa sonzognii Dalens and Robin, sp. nov. (Coleoptera: Cerambycidae: Lamiinae) is described from French Guiana and compared to other local species. A new key for the genus Olivensa Lane, 1965 is proposed.

A New Species Of Allomallodon Santos-Silva And Galileo, 2010 From Bolivia (Coleoptera: Cerambycidae: Prioninae: Macrotomini), James E. Wappes, Antonio Santos-Silva

Insecta Mundi

A new species of Allomallodon Santos-Silva and Galileo, 2010, A. bolivianus Wappes and Santos-Silva (Coleoptera: Cerambycidae: Prioninae: Macrotomini), is described from Bolivia and a key is provided to separate the three species now assigned to the genus.

The Effects Of Urbanization On Bee Communities Depends On Floral Resource Availability And Bee Functional Traits., Caleb J Wilson, Mary A Jamieson

Entomology Faculty Publications

Wild bees are important pollinators in many ecosystems threatened by anthropogenic disturbance. Urban development can reduce and degrade natural habitat for bees and other pollinators. However, some researchers suggest that cities could also provide refuge for bees, given that agricultural intensification may pose a greater risk. In this study, we surveyed bee communities at 15 farms and gardens across an urban-rural gradient in southeastern Michigan, USA to evaluate the effect of urbanization on bees. We examined how floral resources, bee functional traits, temperature, farm size, and the spatial scale of analysis influence bee response to urbanization. We found that urbanization …

Components Of The Ribosome Biogenesis Pathway Underlie Establishment Of Telomere Length Set Point In Arabidopsis, Liliia R. Abdulkina, Callie Kobayashi, John T. Lovell, Inna B. Chastukkhina, Behailu B. Aklilu, Inna A, Agabekian, Ana V. Suescún, Lia R. Valeeva, Chuluuntsetseg Nyamsuren, Galina V. Aglyamova, Margarita R. Sharipova, Dorothy E. Shippen, Thomas E. Juenger, Eugene V. Shakirov

Biological Sciences Faculty Research

Telomeres cap the physical ends of eukaryotic chromosomes to ensure complete DNA replication and genome stability. Heritable natural variation in telomere length exists in yeast, mice, plants and humans at birth; however, major effect loci underlying such polymorphism remain elusive. Here, we employ quantitative trait locus (QTL) mapping and transgenic manipulations to identify genes controlling telomere length set point in a multi-parent Arabidopsis thaliana mapping population. We detect several QTL explaining 63.7% of the total telomere length variation in the Arabidopsis MAGIC population. Loss-of-function mutants of the NOP2A candidate gene located inside the largest effect QTL and of two other …

Evolution - #0: Advanced Biological Systems, Jessica Amacher, Sowmya Anjur, Donald Dosch, Sarah O'Leary-Driscoll, Crystal Randall

Unit 1: Evolution

The first unit of Advanced Biological Systems is focused on the theory of evolution, the mechanisms of evolutionary change, and discussions of the biological species concept. We discuss briefly how biodiversity stabilizes ecosystems. A study of biological evolution is placed first in the sequence of our curriculum to establish a foundation that explains the diversity of organisms, as well as biochemical processes, and the ongoing change process we witness today. These concepts will later be utilized in our curriculum to highlight cellular and metabolic diversity, the development of cancers, the interactions of bacteria with the ecosystem of the human host, …

Evolution - #8: Ecosystem Disrupted, Jessica Amacher, Sowmya Anjur, Donald Dosch, Sarah O'Leary-Driscoll, Crystal Randall

Unit 1: Evolution

This is the culminating activity for the evolution unit. For this assignment, students must research into the impact human industry has on a small part of our world. Students have had a brief introduction to the history of the planet and the role that carbon dioxide concentration play in climate change. The role of climate and weather patterns is important in a discussion of a chosen place on the planet. Students have spent a large amount of effort in understanding evolutionary theory and mechanisms and seen it in practice as they read about speciation. With this assignment, students can synthesize …

Evolution - #3: Evolution On The Web, Jessica Amacher, Sowmya Anjur, Donald Dosch, Sarah O'Leary-Driscoll, Crystal Randall

Unit 1: Evolution

This lesson is a companion piece the previous one: Evolutionary Evidences and Inferences. It is completed supported by readings at an online site hosted by The University of California at Berkeley. The site is linked here:

http://evolution.berkeley.edu/evolibrary/article/0_0_0/evo_14

Evolution - #2: Evolutionary Evidence And Inferences, Jessica Amacher, Sowmya Anjur, Donald Dosch, Sarah O'Leary-Driscoll, Crystal Randall

Unit 1: Evolution

The theory of evolution articulates elegantly a series of inferences from a vast collection of observations and evidence. We present some of those evidences here to stimulate in our students the sorts of scientific reasoning necessary to understand the presence and origin of diversity of life on the planet.

Evolution - #1: History Of Life, Jessica Amacher, Sowmya Anjur, Donald Dosch, Sarah O'Leary-Driscoll, Crystal Randall

Unit 1: Evolution

From the perspective of a biologist, the history of life on the Earth is a recurring story. Although details may be different, what happens today has precedence in the occurrences of the past. Two underlying ideas are vital for students to understand a modern conception of the theory of evolution. First, over long periods of time, and due to natural events, the environment of the Earth has changed, sometimes dramatically. Second, each environmental change has created more favorable conditions for some species to live and reproduce, while producing less favorable conditions for others. This first lesson in our unit on …

Evolution - #4: Genetic Drift And Founder Effect, Jessica Amacher, Sowmya Anjur, Donald Dosch, Sarah O'Leary-Driscoll, Crystal Randall

Unit 1: Evolution

Genetic drift is a term used to describe chance fluctuations in the allelic frequencies in a population over time. The effects of genetic drift tend to be very minor in large populations, but they can be quite significant in small populations. Alleles are different functional forms in which a gene might exist. Humans have two alleles, sometimes the same but sometimes different, of most of their genes. In any population, it is possible to determine the frequency of all alleles. If these alleles get passed on to the next generation at random, then we should expect to see approximately the …

Evolution - #6: Selection Simulation, Jessica Amacher, Sowmya Anjur, Donald Dosch, Sarah O'Leary-Driscoll, Crystal Randall

Unit 1: Evolution

A modern understanding of the theory of evolution revolves around the selection of certain types within a population that over long time periods eventually leads to change of the species. This descent with modification is modeled with this activity, and leads to a subsequent lesson that has students reading about research into examples of speciation.

Evolution - #5: Globin Gene Evolution, Jessica Amacher, Sowmya Anjur, Donald Dosch, Sarah O'Leary-Driscoll, Crystal Randall

Unit 1: Evolution

For this lesson, students are guided through the steps necessary to compare nucleotide and amino acid sequences available at the National Center for Biotechnology Information that is maintained by the National Institutes of Health. The lesson starts with an examination of the alpha-globin gene. Alpha-globin is one of the proteins that constitutes hemoglobin. Student look at the various sequences of this gene that have been deposited at NCBI with a goal of determining alternative forms of the gene. The lesson then broadens the scope of comparison to include members of the globin protein family. Students create a phylogenetic tree that …

Evolution - #7: Speciation Jigsaw, Jessica Amacher, Sowmya Anjur, Donald Dosch, Sarah O'Leary-Driscoll, Crystal Randall

Unit 1: Evolution

This is a lesson intended to be complementary to the selection simulation. Whereas the simulation was used to develop a conceptual understanding of selection, the readings done here are used to allow students to see the application of their conceptualized understanding to researched examples of selection and speciation.

The Response Of Utah Lake's Plant And Algal Community Structure To Cultural Eutrophication, Leighton R. King

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Human activities have long had a negative impact on the water quality of freshwater lakes around the world. Utah Lake, located in north-central Utah, has been a subject of such impacts, as the lake experiences recurrent harmful algal blooms during the summer months. Lake warnings and closures have made the public increasingly aware of the ecological and economic impact of these blooms. The objectives of this study were to: 1) compare historical and present-day water quality and ecosystem conditions using environmental data contained in sediment cores, 2) identify whether, and when, Utah Lake transitioned from clearwater to turbid conditions, and …

Effects Of Soil-Borne Pathogens On Seedling Establishment Patterns In Forest Systems, Eric P. Sodja

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The Janzen-Connell mechanism is proposed to maintain plant diversity: predators and diseases of seeds reduce the number of seeds that survive near a parent tree, but allow seeds far from the parent tree to grow into adulthood. In the area where seeds don’t survive, seedlings from other tree species which are not affected by the seed consumer can grow. At large scales, this effect is thought to increase overall plant diversity. Soil-borne pathogens can contribute to seed mortality in this way, but we don’t know how important different parts of their lifecycle are in creating Janzen-Connell patterns. To determine the …

Assessing & Protecting Dark Night Skies In El Morro National Monument, Leslie Kobinsky

All Graduate Plan B and other Reports, Spring 1920 to Spring 2023

Light pollution is causing the disappearance of dark night skies around the world. In the United States alone, 1/3 of people are unable to see the Milky Way where they live (Ramlagan, 2016). National Park Service sites contain some of the darkest skies in the country. Here at El Morro National Monument, these dark skies are a beautiful and healthy benefit to people in the local community and visitors traveling from afar. El Morro’s current park legislation does not include specific measures of protection for the night sky. This capstone project will create a baseline data set of night sky …

Changes In The Diet And Body Size Of A Small Herbivorous Mammal (Hispid Cotton Rat, Sigmodon Hispidus) Following The Late Pleistocene Megafauna Extinction, Catalina P. Tomé, Emma A. Elliott Smith, S. Kathleen Lyons, Seth D. Newsome, Felisa A. Smith

School of Biological Sciences: Faculty Publications

The catastrophic loss of large-bodied mammals during the terminal Pleistocene likely led to cascading effects within communities. While the extinction of the top consumers probably expanded the resources available to survivors of all body sizes, little work has focused on the responses of the smallest mammals. Here, we use a detailed fossil record from the southwestern United States to examine the response of the hispid cotton rat Sigmodon hispidus to biodiversity loss and climatic change over the late Quaternary. In particular, we focus on changes in diet and body size. We characterize diet through carbon (δ¹³C) and nitrogen …