Ecology and Evolutionary Biology Commons^™

The Nebraska Bird Review, Volume 86 June 2018 Number 2

Nebraska Bird Review

Spring Field Report, March - May 2018, by W. Ross Silcock …50-89

NOU Spring Field Days and Annual Meeting at Ft. Robinson, May 18-20, 2018, by Janis Paseka … 89-95

First Record of Fulvous Whistling-Duck (Dendrocygna bicolor) for Nebraska, by Matt Haugen … 96-98

Subscription and Organization Information … 99

Predicting Critical Transitions In Spatially Distributed Populations With Cubical Homology, Laura Storch, Sarah Day

Biology and Medicine Through Mathematics Conference

No abstract provided.

The Role Of Outcome Preferences In Optimizing Heterogenous Disease Control Strategies., Evan Milliken

Biology and Medicine Through Mathematics Conference

No abstract provided.

Population Genetics And Bumble Bee Conservation: Saving Species By Thinking Small, Cady Greenslit

Lawrence University Honors Projects

Pollinators have experienced a severe decline over the last few decades, and this includes bumble bee populations (g. Bombus). Bumble bees are important native pollinators, and here I investigate the health of local populations with molecular tools. The field of conservation genetics has created useful methodology for investigating the health and informing management strategies of threatened populations. This work investigates and describes the applications of population genetics, which uses span across the board. These applications are then brought back into the context of bumble bee conservation, and how they fit into the experimental plan I originally designed. I designed …

The Temporal And Spatial Dynamics Of Larval Supply, Settlement, And Adult Populations Of Chthamalus Fissus Within The La Jolla, California Rocky Intertidal, Catharine Hargenrader

Theses

The role of post-settlement processes in benthic invertebrate recruitment dynamics has been well established; however, more recently, studies have been resolving the pre-settlement processes and environmental variables that may shape initial settlement. We examined the major space occupying barnacle Chthamalus fissus to determine the spatial and temporal dynamics of settlement in relation to larval supply, adult populations, and habitat characteristics (including elevation as a proxy for immersion, proximity to water’s edge, and the availability of free space) within the La Jolla, CA rocky intertidal. With respect to habitat characteristics, we investigated the influence of available free space on the dynamics …

Functions Of Ecosystems: Stream Metabolism As An Efficient And Effective Means To Gage The Health And Understand The Interworking Of Urban Streams In A Watershed Of Rock Island, Il, Ryan Johnson, Dr. Kevin Geedey

Celebration of Learning

Stream metabolism is a critical functional measure of stream health that integrates physical parameters like slope and discharge, with ecosystem functions like photosynthesis and respiration. Stream metabolism is widely studied; however, urban stream metabolism remains poorly understood. Stream metabolism was measured for five streams ranging from 1^st to 5^th orders from October 11^th to October 18^th 2017 and four streams ranging from 1^st to 4^th order from October 22^nd to 25^th 2017 located within an approximately 9.3 square kilometer watershed of Rock Island, IL that has an urban to suburban type of …

A Quantitative Analysis Of The Effects Of Urbanization, Mesophication And Prescribed Burns On Oak Woodlands In The Chicago Metropolitan Area, Chad Populorum

Celebration of Learning

Urban expansion has had devastating impacts on forest ecosystems, especially within the past century. Human attempts to dominate nature have diminished natural disturbance regimes, which have maintained the biodiversity and historic composition of these ecosystems. Fires have been a prominent force in maintaining the structure of oak, hickory and other heliophytic (sun loving and fire-adapted) forest systems. Human induced fire suppression has led to mesophication across North America. Mesophication is the transition from drier conditions with open canopies to wetter conditions with closed canopies. These new conditions decrease the survival rates of these important species and begin to favor mesophytic …

Balancing Urban Biodiversity Needs And Resident Preferences For Vacant Lot Management, Christine C. Rega-Brodsky, Charles H. Nilon, Paige S. Warren

Faculty Submissions

Urban vacant lots are often a contentious feature in cities, seen as overgrown, messy eyesores that plague neighborhoods. We propose a shift in this perception to locations of urban potential, because vacant lots may serve as informal greenspaces that maximize urban biodiversity while satisfying residents’ preferences for their design and use. Our goal was to assess what kind of vacant lots are ecologically valuable by assessing their biotic contents and residents’ preferences within a variety of settings. We surveyed 150 vacant lots throughout Baltimore, Maryland for their plant and bird communities, classified the lot’s setting within the urban matrix, and …

High Interspecific Variation In Nutrient Excretion Within A Guild Of Closely Related Caddisfly Species, Jared A. Balik, Brad W. Taylor, Susan E. Washko, Scott A. Wissinger

Watershed Sciences Faculty Publications

Understanding the amount of variation in functional traits between closely related species within guilds is critical for understanding links between community composition and ecosystem processes. Nutrient excretion is an important link between animals and their environments, and aquatic invertebrate communities can supply a considerable proportion of ecosystem nutrient demand via excretion. We quantified nitrogen (N) and phosphorus (P) excretion rates of 10 species of larval caddisflies that inhabit high‐elevation ponds and wetlands to determine the magnitude of variation in nutrient excretion within this guild. We found considerable interspecific variation in biomass‐specific excretion of nitrogen (eightfold differences), phosphorus (sevenfold differences), and …

Association Of P53 Polymorphisms, Pah-Like Fluorescence, And Developmental Trends In Caught Gulf Menhaden To Crude Oil Exposure Post-Deepwater Horizon Oil Spill: A Holistic Approach, Kevin Luiz Frisina

Capstone Projects/Undergraduate Honors Theses

Environmental pollution is of great concern in the United States. Of special concern is the chronic effects from the exposure to potentially carcinogenic compounds released from episodic environmental disasters (e.g. 911 twin-towers, oil spills). Disasters like the British Petroleum (BP) Deepwater Horizon oil spill in the Gulf of Mexico (GOM), affected many marine organisms, exposing them to crude oil polycyclic aromatic hydrocarbons (PAHs), some of which are known carcinogenic. Despite many marine-based consumer products (e.g. fish oil, animal feed, fertilizer) were known affected by the BP oil spill, bioaccumulation and chronic toxicity of the crude oil PAHs into marine organisms …

Effect Of Adult Chemical Cues On Molting Of Fiddler Crab Megalopae In Low Salinity Seawater, Sydney Rilum

Undergraduate Honors Theses

Three species of fiddler crabs, Uca minax, U. pugnax, and U. pugilator, are commonly found in estuaries along the Atlantic coast, each with distinct adult habitats differing in salinity and sediment grain size. Prior research has found evidence for larvae exhibiting selective settlement; however, the degree to which and the method by which they choose their species-appropriate habitat to settle in is still unknown. Additionally, a recent study determined that chemical cues from adult crabs stimulate molting in field-caught fiddler crab megalopae, as previously determined in lab-reared megalopae; however, in 35 ppt seawater, few U. minax molted. …

On The Relationship Between Phylogenetic Diversity And Trait Diversity, Caroline M. Tucker, T. Jonathan Davies, Marc W. Cadotte, William D. Pearse

Biology Faculty Publications

Niche differences are key to understanding the distribution and structure of biodiversity. To examine niche differences, we must first characterize how species occupy niche space, and two approaches are commonly used in the ecological literature. The first uses species traits to estimate multivariate trait space (so‐called functional trait diversity, FD); the second quantifies the amount of time or evolutionary history captured by a group of species (phylogenetic diversity, PD). It is often—but controversially—assumed that these putative measures of niche space are at a minimum correlated and perhaps redundant, since more evolutionary time allows for greater accumulation of trait changes. This …

The Effects Of Gopher Tortoise (Gopherus Polyphemus) Herbivory On Plant Community Composition And Seed Germination, And The Effects Of Gut Passage On The Germinability Of Seeds: A Meta-Analysis, Jason C. Richardson

USF Tampa Graduate Theses and Dissertations

Herbivory produces direct and indirect effects on plants and at different spatial scales will have varied consequences. Consumption of plants by vertebrate grazers may affect the plants on an organismal level through direct mortality, on a community level by changing species composition or by altering the rate of succession, and even at a whole ecosystem level by altering nutrient cycles.

The majority of the scientific literature has focused extensively on herbivory by mammals and birds. With regard to mammals, studies have shown how folivory affects individual plants, plant populations, and communities of plants.

Mammals, as well as birds, also ingest …

Zero Textbook Cost Syllabus For Env 1004 (Fundamentals Of Ecology-Lab), Aleksandra Kravtsova

Open Educational Resources

Fundamentals of Ecological Research is a hands-on course designed to teach students the basic concepts and methodologies used in the field of ecology. The significance of ecological research to current environmental issues, both local and global, will be stressed throughout the course.

Radical Social Ecology As Deep Pragmatism: A Call To The Abolition Of Systemic Dissonance And The Minimization Of Entropic Chaos, Arielle Brender

Student Theses 2015-Present

This paper aims to shed light on the dissonance caused by the superimposition of Dominant Human Systems on Natural Systems. I highlight the synthetic nature of Dominant Human Systems as egoic and linguistic phenomenon manufactured by a mere portion of the human population, which renders them inherently oppressive unto peoples and landscapes whose wisdom were barred from the design process. In pursuing a radical pragmatic approach to mending the simultaneous oppression and destruction of the human being and the earth, I highlight the necessity of minimizing entropic chaos caused by excess energy expenditure, an essential feature of systems that aim …

‘Preferred’ Stimulus Of A Whole Model Visual System, Olivier Penacchio, Julie M. Harris

MODVIS Workshop

No abstract provided.

Social Play Predicts Docility In Juvenile Ground Squirrels, James Hurst-Hopf, Scott L. Nunes

Undergraduate Honors Theses

We evaluated the hypothesis that social play behavior influences the development of temperament in young animals, using docility as a measure of temperament. We observed the play behavior of juvenile Belding’s ground squirrels (Urocitellus beldingi) during the developmental period in which play primarily occurs, and conducted behavioral tests measuring docility at the beginning and end of the play interval. Tests involved handling squirrels and recording their responses. Body mass was a reliable predictor of docility at the beginning of the play period. Rates of social play and maximum distances traveled from the natal burrow during the play interval …

The Distribution, Abundance, And Gut Microbiome Of Ribbed Mussel, Geukensia Demissa, Across Natural And Restored Salt Marshes In Jamaica Bay, New York, Bethany Freynk

Student Theses and Dissertations

Coastal wetlands perform valuable functions by protecting shorelines from floodwaters and storm surges, providing habitats for marine species, and improving local water quality. Unfortunately, over half of the area of global wetlands has been lost over the past century. Locally, in Jamaica Bay (Queens, NY), loss of wetlands has exceeded 98%. Restoration of Jamaica Bay marshes began in 2003. Ribbed mussels, Geukensia demissa, live symbiotically with marsh plants and have been shown to stabilize sediments and provide organic nutrients that enhance marsh plant growth. Mussels are suspension feeders, which collect algae from seawater and deposit organic matter in marsh sediments. …

Population Structure, Demographic History, And Environmental Niche Of The Sand Fly Disease Vector Lutzomyia Shannoni (Dyar) (Diptera: Psychodidae) In The U.S., Mexico, And Colombia, Matthew E. Wolkoff

Biology Theses

Lutzomyia shannoni (Dyar, 1929) (Diptera: Psychodidae) is the only known sand fly vector of vesicular stomatitis virus, a putative leishmaniasis vector, and also boasts the widest distribution of any sand fly in the New World. Research on Lu. shannoni in Central and South America has revealed genetically divergent subpopulations; however, tentative analysis of Lu. shannoni in the U.S. has failed to detect any significant population structure, even between specimens collected from highly disparate localities.

The present study used four molecular markers to more closely investigate the population structure of Lu. shannoni in the U.S., and assess the species’ relationships with …

Larval-Ant Interactions In The Mojave Desert: Communication Brings Us Together, Alicia Mellor

UNLV Theses, Dissertations, Professional Papers, and Capstones

Butterflies are a diverse and essential group of pollinators whose abundance is predominantly determined by growth and survival of their larvae. In the family Lycaenidae, many species participate in a larval-ant mutualism where ants feed on nutrient-rich nectar produced by larvae and, in turn, protect those larvae from predators. Emerging evidence indicates larval scent in the form of cuticular hydrocarbons (CHCs), not nectar production, drives this interaction. This study takes two approaches to investigate CHCs as the driver behind the larval-ant mutualism in three butterfly species native to southern Nevada: Euphilotes bernardino martini (Martin’s blue), Brephidium exilis (western pygmy blue), …

Mitigating Bioiversity Loss Of Native Plants, Jamie Ana Grigonis

Student Theses 2015-Present

Growing up harvesting from my own vegetable garden and going from nursery to nursery with my mother, it has been extremely evident that plant biodiversity is more than just privet along driveways and carnations in window boxes. Plant biodiversity is often overlooked but crucial to having a healthy and thriving environment. Without certain plants, our ecosystems will crumble and this needs to be addressed now while it’s still at a level we can grow from. In my internship I am working alongside the director of the Thain Family Forest at the New York Botanical Gardens in order to get a …

Understanding Patterns Of Diversity And Evolution In Mainland Anolis Lizards, Levi Nathaniel Gray

Biology ETDs

Patterns of organismal diversity and evolution are often difficult to interpret with a high level of confidence. The number of mechanisms and processes that contribute to shaping patterns of diversity is extensive and is reflected in the many methods researchers have used to infer causation. Taxonomic groups that are well-studied can offer more precise interpretation of pattern and process due to the considerable amount of research addressing ecology, natural history, and behavior of the organisms.

In this dissertation, I explore patterns of phylogenetic and phenotypic variation in Anolis lizards (anoles) by testing hypotheses that could have led to the observed …

Habitat Associations And Detectability Of Three Unionid Species Along The Upper Sabine River In East Texas, Jared Dickson

Biology Theses

East Texas contains the highest diversity of mussels in the state. Of the 37 species in East Texas, six are listed by the state as threatened and three have been proposed for listing as threatened or endangered under the U.S. Endangered Species Act. Although diverse, mussel populations are declining and few studies exist that establish habitat relationships identifying determinants of mussel distributions in the upper Sabine River. I explored potential habitat preferences of three state listed species using an occupancy modeling approach, including the: Texas Pigtoe, Fusconaia askewi, Sandbank Pocketbook, Lampsilis satura, and Texas Heelsplitter, Potamilus amphicaenus. …

Cloning And Characterization Of A Pyrethroid Pesticide Decomposing Esterase Gene, Est3385, From Rhodopseudomonas Palustris Psb-S, Xiangwen Luo, Deyong Zhang, Xuguo Zhou, Jiao Du, Songbai Zhang, Yong Liu

Entomology Faculty Publications

Full length open reading frame of pyrethroid detoxification gene, Est3385, contains 963 nucleotides. This gene was identified and cloned based on the genome sequence of Rhodopseudomonas palustris PSB-S available at the GneBank. The predicted amino acid sequence of Est3385 shared moderate identities (30–46%) with the known homologous esterases. Phylogenetic analysis revealed that Est3385 was a member in the esterase family I. Recombinant Est3385 was heterologous expressed in E. coli, purified and characterized for its substrate specificity, kinetics and stability under various conditions. The optimal temperature and pH for Est3385 were 35 °C and 6.0, respectively. This enzyme could …

Geospatial Analysis Of Eastern Oyster Habitat And Disease In The Chesapeake Bay, Hannah Bradley

Senior Honors Projects, 2010-2019

Crassostrea virginica, common name eastern oyster, in the Chesapeake Bay is currently at 1% of its peak annual landings in 1884 (600,000 metric tons). This decline is in spite of being considered a resilient species. Causes of the decline include overharvesting, disease, and habitat loss. While efforts have been made to combat each cause, the key element to recovering the population is coordinated habitat restoration. This study aims to develop a GIS-based habitat model for the eastern oyster in the Chesapeake Bay. The first goal of this study was to determine the water quality parameters necessary for successful oyster …

Distribution Patterns Of Gastrointestinal Parasites In Vervet Monkeys (Chlorocebus Pygerythrus) At Gombe National Park, Tanzania, Jared S. Bakuza

Tanzania Journal of Science

Vervet monkeys at Gombe National Park in western Tanzania constitute a key component of the park’s ecosystem through interactions with other animals and people in the area. However, the parasite fauna of these animals has not been investigated. Thus, 21 faecal samples obtained from the animals in September 2010 were examined for parasites using formol-ethyl technique. The parasites observed included Trichuris spp., Physaloptera spp., hookworms and unidentified nematodes. While egg counts for unidentified nematodes did not vary with vervet monkey communities (z = 0.759, p = 0.448), other parasites were significantly higher among vervets at north of the park near …

Assessment Of Heavy Metal And Radioactivity Levels In Spinach (Spinacia Oleracea) Grown At Bahi Wetlands In Dodoma Region, Najat K. Mohammed, Boniface Haule

Tanzania Journal of Science

This study reports on the levels of heavy metals and radionuclides in Spinach (Spinacia oleracea) grown in Bahi wetlands in Dodoma Region. The farm soil in Bahi wetland has been reported to contain elevated concentrations of 238U, 232Th and 40K due to the existence of shallow uranium deposit in the area. In this study, spinach (Spinacia oleracea) grown in three zones of Bahi district were analyzed for heavy metals and radioactivity associated with the uranium deposit in the area. The concentrations of elements were determined by Energy Dispersive X-ray Analysis (EDXRF) of Tanzania Atomic Energy Commission, Arusha. The activities of …

Impervious Surface And Macroinvertebrates In The South Atlanta Metropolitan Area, Christopher H. Kodani

Georgia Journal of Science

Studies utilizing volunteer stream monitoring data are rare, particularly in in the Atlanta metropolitan area. This study investigated how the macroinvertebrate communities of 20 different stream sites in the south metropolitan Atlanta area were affected by the imperviousness of their surrounding watersheds. These sites were in a diverse landscape which included forests, wetlands, suburban day-use parks, and parking lots. Percentage impervious surface area was measured using Geographical Information System (GIS) analysis. Macroinvertebrates were collected using Georgia Adopt-A-Stream’s volunteer monitoring protocols, and a water quality index (WQI) was calculated from these data. The relationship between WQI and imperviousness was curvilinear and …

Sulfur Cave (Romania), An Extreme Environment With Microbial Mats In A Co2-H2S/O2 Gas Chemocline Dominated By Mycobacteria, Serban M. Sarbu, Joost W. Aerts, Jean-François Flot, Rob J.M. Van Spanning, Calin Baciu, Artur Ionescu, Boglárka M. Kis, Reka Incze, Sándor Sikó-Barabási, Zoltan Para, Botond Hegyeli, Nicu-Viorel Atudorei, Casey Barr, Kenneth Nealson, Ferenc L. Forray, Cristian Lascu, Emily J. Fleming, Wilbert Bitter, Radu Popa

International Journal of Speleology

Sulfur Cave (Puturosu Mountain, Romania) is an extreme environment, unique for displaying life in a gas chemocline. The lower part of the cave is filled with CO₂, CH₄, and H₂S of mofettic origin, while the upper part contains air that floats above the heavier volcanic gasses. S° and H₂SO₄ (from sulfur-oxidation) cover the cave wall at and below the CO₂-H₂S:O₂ gas/gas interface. On the cave wall, near the interface the pH is < 1 and unusual microbial biofilms occur on the rock’s surface. We provide context information on the geology, mineralogy, chemistry and biology to better understand this unique environment. We have used X-ray diffraction, optical microscopy, scanning electron microscopy with EDAX capabilities, stable isotope analysis and 16S and 18S rDNA amplicon sequencing. The most common taxa in the microbial biofilms are Mycobacteria, Acidithiobacillus and Ferroplasmaceae. Liquid water in this system originates solely from condensation of water …

Juvenile Amphibian Response To Oak And Maple Leaf Litter, Benjamin Breslau

Honors Scholar Theses

The composition of tree species within New England forests has changed significantly in recent decades, with an increase in maple (Acer spp.) abundance and a decrease in oak (Quercus spp.) abundance. Changing forest structure results in changing leaf litter composition of the forest floor, which influences the ground-dwelling amphibians that live in the litter. To better understand how changes to forest composition alters amphibian habitat quality, we recorded the growth and survival of 27 juvenile wood frogs (Lithobates sylvaticus or Rana sylvatica) and 27 juvenile American toads (Anaxyrus americanus) in response to leaf litter …