Ecology and Evolutionary Biology Commons^™

The Emotional Brain Of Fish, Sonia Rey Planellas

Animal Sentience

Woodruff (2017) analyzes structural homologies and functional equivalences between the brains of mammals and fish to understand where sentience and social cognition might reside in teleosts. He compares neuroanatomical, neurophysiological and behavioural correlates. I discuss current advances in the study of fish cognitive abilities and emotions, and advocate an evolutionary approach to the underlying basis of sentience in teleosts.

Similar Anatomy Does Not Imply Comparable Function, Jay R. Stauffer Jr.

Animal Sentience

Woodruff concludes that ray-finned fishes (Actinopterygii) are sentient and that the pallium contributes to sentience in these fishes. He gives a detailed description of the pallium; however, he assumes that similar structures in fishes and tetrapods support similar behaviors, capabilities, and functions. I reject the premise that similarities in structure imply similarities in function. The fact that a selected species of fish may exhibit behaviors, reactions, and/or anatomy suggestive of sentience does not necessarily generalize to all teleosts.

Can Unconscious Brain Processes Indicate Sentience?, Vincent Taschereau-Dumouchel, Piercesare Grimaldi, Hakwan Lau

Animal Sentience

We disagree with Woodruff that we have good neurobiological reasons to think fishes are sentient, because mechanisms for consciousness are controversial even in humans. To the extent that there are consensuses in that literature, they do not support Woodruff's claims.

What Can Vigilance Tell Us About Fear?, Guy Beauchamp

Animal Sentience

Animal vigilance is concerned with the monitoring of potential threats caused by predators and conspecifics. Researchers have argued that threats are part of a landscape of fear tracking the level of risk posed by predators and conspecifics. Vigilance, which is expected to vary with the level of risk, could thus be used as a measure of fear. Here, I explore the relationship between vigilance and fear caused by predators and conspecifics. The joint occurrence of vigilance and other physiological responses to fear, such as increased heart rate and stress hormone release, would bolster the idea that vigilance can be a …

Operationalizing Fear Through Understanding Vigilance, Ralph Adolphs

Animal Sentience

Beauchamp’s target article raises important questions about the features that often accompany fear. How reliable an indicator of fear is vigilance? Is it constitutive, cause, or consequence of fear? These questions force us towards a clearer definition of “fear.”

Individual Variation In Fear Behaviour, Rob Found

Animal Sentience

Individual variation in behaviour adds another layer of complexity to studies of animal responses to fear and risk, but when individual responses are consistent, and correlated with other behaviours, these patterns can provide a structure that furthers our understanding. I interpret Beauchamp’s review of vigilance and fear from the perspective of my own studies of elk personality. Wild elk responses to changing stimuli (benign or aversive) illustrate how personality is a key factor in explaining variation in vigilance and fear behavior. Personality even influences how wildlife can learn to assess risk and adjust their fear responses accordingly.

Considering Side Biases In Vigilance And Fear, Lesley J. Rogers

Animal Sentience

Measures of vigilance and fear might be more consistently associated if side biases are taken into account, because the right side of the brain is specialised to detect predators and to express fear responses. In species with eyes positioned laterally and with relatively small binocular fields, this brain asymmetry is manifested as eye preferences because each eye sends most of its input to be processed in the opposite side of the brain. Hence, responses elicited by stimuli on the animal’s left side are more likely be associated with fear than are responses to the same stimuli on the animal’s right …

Cautions About Precautions, Jay R. Stauffer Jr.

Animal Sentience

Assuming an animal to be sentient in the absence of conclusive evidence to the contrary is an extreme position, hence it should not and could not be the default assumption. Birch explains how the precautionary principle may be used to substantiate decisions to give the animal the benefit of doubt. Although I am reluctant to accept all of his points, Birch has provided an excellent argument for the use of the precautionary principle for the detection of animal sentience. I agree that more research is needed to refine and understand this relationship.

Raising The Moral Consciousness Of Science, Bernard Rollin

Animal Sentience

Precaution on behalf of sentient animals should not be tempered by the questionable principle of the amorality of science.

Not Statistically Significant, But Still Scientific, Rachael L. Brown

Animal Sentience

Birch’s formulation is persuasive but not nuanced enough to capture at least one situation where it is reasonable to invoke the precautionary principle (PP): when we have multiple, weak, but convergent, lines of evidence that a species is sentient, but no statistically significant evidence of a single credible indicator of sentience within the order as required by BAR. I respond to the worry that if we include such cases in our framework for applying the PP, we open ourselves to the charge of being “unscientific.”

The Precautionary Principle: A Cautionary Note, Robert C. Jones

Animal Sentience

The precautionary principle regarding animal sentience is often used in decision-making about human actions that may cause harm to nonhuman animals. Birch (2017) develops an account of the precautionary principle requiring two pragmatic rules for its implementation. I support Birch's proposal but offer a cautionary note about relying on precautionary principles if one's ultimate goal is to emancipate animals from human domination.

Will The Precautionary Principle Broaden Acceptance Of Animal Sentience?, Simon Leadbeater

Animal Sentience

Birch uses existing practice to develop a formal Animal Sentience Precautionary Principle (ASPP), which he hopes will become more widely adopted and improve animal welfare outcomes. Birch considers the assumption that all animals are sentient to be extreme. Despite its merits, Birch’s ASPP remains human-centred.

Red Snapper Distribution On Natural Habitats And Artificial Structures In The Northern Gulf Of Mexico, Mandy Karnauskas, John F. Walter Iii, Matthew D. Campbell, Adam G. Pollack, J. Marcus Drymon, Sean P. Powers

University Faculty and Staff Publications

In 2011, an intensive, multiple-gear, fishery-independent survey was carried out in the northern Gulf of Mexico (GOM) to collect comprehensive age and length information on Red Snapper Lutjanus campechanus. Based on this synoptic survey, we produced a spatial map of Red Snapper relative abundance that integrates both gear selectivity effects and ontogenetically varying habitat usage. Our methodology generated a spatial map of Red Snapper at a 10-km2 grid resolution that is consistent with existing knowledge of the species: Red Snapper occurred in relatively high abundances at depths of 50–90 m along the coasts of Texas and Louisiana and in smaller, …

Pseudopecoelus Mccauleyi N. Sp. And Podocotyle Sp. (Digenea: Opecoelidae) From The Deep Waters Off Oregon And British Columbia With An Updated Key To The Species Of Pseudopecoelus Von Wicklen, 1946 And Checklist Of Parasites From Lycodes Cortezianus (Perciformes: Zoarcidae), Charles K. Blend, Norman O. Dronen, Gábor R. Rácz, Scott Lyell Gardner

Scott L. Gardner Publications

Pseudopecoelus mccauleyi n. sp. (Opecoelidae: Opecoelinae) is described from the intestine of the bigfin eelpout, Lycodes cortezianus (Gilbert, 1890) (Perciformes: Zoarcidae), collected at 200–800 m depths in the northeastern Pacific Ocean off Oregon and Vancouver Island, British Columbia. The new species is distinguished by possessing a unique combination of the following diagnostic characters: vitelline fields that extend to the posterior margin of the ventral sucker; a slender, tubular and sinuous seminal vesicle that extends some distance into the hindbody; an unspecialized, protuberant ventral sucker; a genital pore at pharynx level; lobed to deeply multilobed testes; a lobed ovary; and an …

A New Species Of Catenotaenia (Cestoda: Catenotaeniidae) From Pygeretmus Pumilio Kerr, 1792 From The Gobi Of Mongolia, Altangerel Tsogtsaikhan Dursahinhan, Batsaikhan Nyamsuren, Danielle Marie Tufts, Scott Lyell Gardner

Scott L. Gardner Publications

From 1999 through 2012, a total of 541 individual rodents (jerboas of the family Dipodidae) were collected from several habitat types, primarily from the Gobi region of Mongolia, and were examined for helminth and protistan parasites. Of those rodents, 25 were identified as Pygeretmus pumilio Kerr, 1792 (Rodentia: Dipodidae), whereas 516 were other species of jerboa from the provinces of Dornogobi, Dundgobi, Omnogobi, Ovorhangai, Bayanhongor, Gobi Altai, and Hovd. During our field work, we collected several cestodes; some of which represented undescribed species, and these new species occurred in 40% of P. pumilio from four separate collecting localities. We designate …

Myrmeconycha New Genus: The Fi Rst Myrmecophilous Fl Ea Beetle (Coleoptera: Chrysomelidae: Galerucinae: Alticini), A. S. Konstantinov, A. K. Tishechkin

Insecta Mundi

The first myrmecophilous flea beetle genus (Myrmeconycha Konstantinov and Tishechkin, new genus) with four new species (M. erwini Konstantinov and Tishechkin, new species – Ecuador, M. gordoni Konstantinov and Tishechkin, new species – Brazil, M. pakaluki Konstantinov and Tishechkin, new species – Panama, and M. pheidole Konstantinov and Tishechkin, new species – Costa Rica) is described and illustrated. It is compared with flea beetles of the subtribe Disonychina (Coleoptera: Chrysomelidae: Galerucinae: Alticini) and may be easily differentiated based on the external and internal features, which include the waxy surface of the head and pronotum, reticulated surface of …

A New Species Of Madoniella Pic (Coleoptera: Cleridae) From Chiapas, Mexico, Jacques Rifkind, Weston Opitz

Insecta Mundi

Opitz (2011) revised the New World clerid genus Madoniella Pic, and recognized 74 species. We describe and illustrate Madoniella fitzgeraldae, new species (Coleoptera: Cleridae), recently discovered in Chiapas, México.

Southeast Farallon Island Arthropod Survey, Jeffrey Honda, Bret Robinson, Michael Valainis, Rick Vetter, Jaime Jahncke

Insecta Mundi

Effective island conservation depends on thorough biodiversity surveys and species assessment. The U.S. Fish and Wildlife Service in coordination with Point Blue Conservation Science undertook a two-year insect survey of the Farallon Islands, California, in order to catalog current insect and spider species on the island and to gather information that will be used to examine prey dynamics to aid in the conservation of the endemic salamander Aneides lugubris (Hallowell). The report lists 11 insect orders representing 60 families, 107 genera and 112 insect species on Southeast Farallon Island. Holometabolous orders were the most represented on the island with Coleoptera …

Annotated World Bibliography Of Host Plants Of The Melon Fly, Bactrocera Cucurbitae (Coquillett) (Diptera: Tephritidae), Grant T. Mcquate, Nicanor J. Liquido, Kelly A. A. Nakamichi

Insecta Mundi

The melon fly, Bactrocera cucurbitae (Coquillett) (Diptera: Tephritidae), is a widespread, economically important tephritid fruit fly species. Bactrocera cucurbitae infests fruits and vegetables of a number of different plant species, with many host plants in the plant family Cucurbitaceae, but with additional hosts scattered across many other plant families. Although thought to be native to India, its distribution has spread throughout many countries in Oriental Asia, into a number of Pacific Island nations, and into Africa. The documented introductions into countries outside its native distribution show that this species could establish in other countries where it does not presently occur, …

Identifi Cation Of A New Species Of Aphis (Hemiptera: Aphididae) Based On Distinct Morphology Rather Than Dna Barcoding, Doris Lagos-Kutz, D. J. Voegtlin, Glen Hartman

Insecta Mundi

Aphis elena Lagos-Kutz and Voegtlin, sp. nov. (Hemiptera: Aphididae), is described from specimens collected in Illinois, USA, on the North American native plant, Pycnanthemum virginianum (L.) T. Dur. & B.D. Jacks. ex B.L. Rob. & Fernald (Family: Lamiaceae). Both apterous and alate viviparae are described and illustrated, and a dichotomous key is provided to apterous and alate viviparae of the six species of Aphis that have been recorded on plants in the family Lamiaceae in North America. Neighbor-joining analysis of cytochrome oxidase 1 (Cox1) indicated a close relationship of the new species with Aphis monardae Oestlund, which also …

Two New Species Of Cerambycidae (Coleoptera) From Colombia, Antonio Santos-Silva, Juan Pablo Botero

Insecta Mundi

Taeniotes antonkozlovi Santos-Silva and Botero, new species (Cerambycidae, Lamiinae, Monochamini) and Amphelictus antonkozlovi Santos-Silva and Botero, new species (Cerambycidae, Cerambycinae, Cerambycini, Sphallotrichina) are described from Colombia.

A Serosurvey Of Diseases Of Free-Ranging Gray Wolves (Canis Lupus) In Minnesota, Usa, Michelle Carstensen, John H. Giudice, Erik C. Hildebrand, J. P. Dubey, John Erb, Dan Stark, John Hart, Shannon M. Barber-Meyer, L. David Mech, Steve K. Windels, Andrew J. Edwards

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

We tested serum samples from 387 free-ranging wolves (Canis lupus) from 2007 to 2013 for exposure to eight canid pathogens to establish baseline data on disease prevalence and spatial distribution in Minnesota’s wolf population. We found high exposure to canine adenoviruses 1 and 2 (88% adults, 45% pups), canine parvovirus (82% adults, 24% pups), and Lyme disease (76% adults, 39% pups). Sixty-six percent of adults and 36% of pups exhibited exposure to the protozoan parasite Neospora caninum. Exposure to arboviruses was confirmed, including West Nile virus (37% adults, 18% pups) and eastern equine encephalitis (3% adults). Exposure rates …

Assessment Of A Channel Catfish Population In A Large Open River System, A. J. Blank, M. J. Hamel, Jonathan J. Spurgeon, Mark A. Pegg

School of Natural Resources: Faculty Publications

Estimates of dynamic rate functions for riverine channel catfish, Ictalurus punctatus (Rafinesque), populations are limited. The open nature and inherent difficulty in sampling riverine environments and the propensity for dispersal of channel catfish impede estimation of population variables. However, contemporary population models (i.e. robust design models) can incorporate the open nature of these systems. The purpose of this study was to determine channel catfish population abundance, survival and size structure and to characterize growth in the lower Platte River, Nebraska, USA. Annual survival estimates of adult channel catfish were 13%–49%, and channel catfish abundance estimates ranged from 8,281 to 24,261 …

Pseudoscorpions Of The Family Cheiridiidae (Arachnida: Pseudoscorpiones) Recovered From Burial Sediments At Pachacamac (500–1,500ce), Peru, Johnica J. Morrow, Livia Taylor, Lauren Peck, Christian Elowsky, Lawrence Stewart Owens, Peter Eeckout, Karl Reinhard

Karl Reinhard Publications

Fragmented remains of pseudoscorpions belonging to the family Cheiridiidae (Arachnida, Pseudoscorpiones) were recovered from Ychsma polity (c. AD 1000–1475) burial sediments from Pachacamac, Peru. Sediments from 21 burials were examined following rehydration in 0.5% trisodium phosphate for 48 h and subsequent screening through a 250 lm mesh. Materials larger than 250 lm were surveyed for the presence of arthropods. A total of two samples contained pseudoscorpion fragments, which were collected and quantified to determine the minimal number of pseudoscorpions present per gram of each sample. Following quantification, pseudoscorpion specimens were imaged utilizing confocal laser scanning microscopy (CLSM) to assist with …

Biodiversity Monitoring Using Environmental Dna: Can It Detect All Fish Species In A Waterbody And Is It Cost Effective For Routine Monitoring?, Lia Smith

Theses: Doctorates and Masters

The challenges associated with environmental monitoring such as the impact on the environment and the financial costs are problems we face when trying to conserve freshwater systems around the world. The need for precise and accurate results that are cost effective is important so that we can achieve our conservation goals.

The overall aim of this study was to explore Next-Generation - metabarcoding for the detection of feral and native freshwater fish species based on the DNA shed by individual organisms into the water column. Cytochrome c oxidase I (COI) primers were developed for this study using DNA from six …

¬Multilocus Phylogeny Of The Lichen Family Megasporaceae, Tim B. Wheeler

Graduate Student Theses, Dissertations, & Professional Papers

The lichen symbiosis is one of the oldest studied mutualisms; in fact, Frank and De Bary coined the term "symbiosis" while studying lichens (Frank, 1877; De Bary 1879). The widespread, stable association between the mycobiont and photobiont in lichens offers an ideal system for the study of co-evolution. The recent application of molecular data to lichens has begun to unveil the complexities involved in these associations (Upreti et al. 2015, Spribille et al. 2016). Lichenized fungi make up a huge fraction of fungal diversity (Nash 2008), yet very little is known of their genetic diversity. Fungal taxonomy is notoriously difficult …

Response Of Amphibian And Invertebrate Communities To Wetland Mitigation In The Greater Yellowstone Ecosystem, Leah K. Swartz

Graduate Student Theses, Dissertations, & Professional Papers

Wetlands play a critical role in supporting freshwater biodiversity and ecosystem services, but human activities have resulted in large-scale loss and degradation of these habitats across the globe. To offset the decline of wetland area, mitigation wetlands are now frequently constructed, but their ability to replace the functions of natural habitats, including providing habitat for native fauna, remains uncertain. A recent highway reconstruction project in northwestern Wyoming caused impacts to and the destruction of multiple natural wetlands. To mitigate this loss, new wetlands were constructed along the highway corridor. To evaluate the performance of these created wetlands relative to reference …

Investigating The Effects Of Changes In Light Quality On Different Life History Stages Of Seagrasses, Simone Strydom

Theses: Doctorates and Masters

Seagrass meadows provide crucial ecosystem services to the coastal zone but globally are threatened. Seagrass loss to date has mainly been attributed to anthropogenic activities that reduce light quantity, such as dredging, declining water quality from urban and agricultural run-off and eutrophication. However, light quality (wavelengths of light) is also altered by these anthropogenic stressors as well as natural events. This study consisted of three main components: (1) characterising light quality to which seagrasses are exposed across a local natural estuarine-ocean gradient and with a human impact pressure; (2) the influence of monochromatic light quality (blue λ=451 nm; green λ=522 …

Nocturnal Roost Tree, Roost Site And Landscape Characteristics Of Carnaby's Black-Cockatoo (Calyptorynchus Latirostris) On The Swan Coastal Plain, Candice Le Roux

Theses: Doctorates and Masters

There is limited information on communal roosting in parrot species of Western Australia and other parts of the world. Carnaby’s Black-Cockatoo is an endangered species that forms large nocturnal communal roosts, and for this reason they are an ideal model species to test the characteristics or factors that are associated with roost sites. Known roost sites distributed across the Swan Coastal Plain were identified and selected through the Great Cocky Count project. A minimum of five and maximum of ten individual trees were assessed at 11 roost sites with an overall total of 95 roost trees sampled. I determined the …

Ecology Of Savanna Ecosystems In Indonesia, Sutomo

Theses: Doctorates and Masters

Tropical savannas in South East Asia are important yet understudied ecosystems. In fact, the description of savanna is limited in the Indonesian Archipelago, a region which, based on climate alone, would be expected to have mostly forest. In this thesis, I compared and contrasted the vegetation characteristics of four savannas in the wetter part of the Indonesian archipelago (Java – Bali – Lombok) to understand how fire and grazing influence their dynamics, and searched for evidence of savanna origins, maintenance, invasion by exotic/woody species and possible ecosystem transitions. Vegetation surveys, remote sensing techniques and statistical models were used to spatially …