Ecology and Evolutionary Biology Commons^™

Ecosystem Services In Managing Residential Landscapes: Priorities, Value Dimensions, And Cross-Regional Patterns, Kelli L. Larson, Jennifer L. Morse, Peter M. Groffman, Neil D. Bettez, Tara Trammell

Environmental Science and Management Faculty Publications and Presentations

Although ecosystem services have been intensively examined in certain domains (e.g., forests and wetlands), little research has assessed ecosystem services for the most dominant landscape type in urban ecosystems—namely, residential yards. In this paper, we report findings of a cross-site survey of homeowners in six U.S. cities to 1) examine how residents subjectively value various ecosystem services, 2) explore distinctive dimensions of those values, and 3) test the urban homogenization hypothesis. This hypothesis posits that urbanization leads to similarities in the social-ecological dynamics across cities in diverse biomes. By extension, the thesis suggests that residents’ ecosystem service priorities for residential …

A Systems Approach To Animal Communication, Eileen A. Hebets, Andrew B. Barron, Christopher N. Balakrishnan, Mark E. Hauber, Paul H. Mason, Kim L. Hoke

Eileen Hebets Publications

Why animal communication displays are so complex and how they have evolved are active foci of research with a long and rich history. Progress towards an evolutionary analysis of signal complexity, however, has been constrained by a lack of hypotheses to explain similarities and/or differences in signalling systems across taxa. To address this, we advocate incorporating a systems approach into studies of animal communication—an approach that includes comprehensive experimental designs and data collection in combination with the implementation of systems concepts and tools. A systems approach evaluates overall display architecture, including how components interact to alter function, and how function …

Genetic Structure Of Micromeria (Lamiaceae) In Tenerife, The Imprint Of Geological History And Hybridization On Within-Island Diversification, Pamela Puppo, Manuel Curto, Harald Meimberg

Biological Sciences Faculty Research

Geological history of oceanic islands can have a profound effect on the evolutionary history of insular flora, especially in complex islands such as Tenerife in the Canary Islands. Tenerife results from the secondary connection of three paleo-islands by a central volcano, and other geological events that further shaped it. This geological history has been shown to influence the phylogenetic history of several taxa, including genus Micromeria (Lamiaceae). Screening 15 microsatellite markers in 289 individuals representing the eight species of Micromeria present in Tenerife, this study aims to assess the genetic diversity and structure of these species and its relation with …

Glyphosate Induces Neurotoxicity In Zebrafish, Nicole M. Roy, Bruno Carneiro, Jeremy Ochs

Biology Faculty Publications

Glyphosate based herbicides (GBH) like Roundup^® are used extensively in agriculture as well as in urban and rural settings as a broad spectrum herbicide. Its mechanism of action was thought to be specific only to plants and thus considered safe and non-toxic. However, mounting evidence suggests that GBHs may not be as safe as once thought as initial studies in frogs suggest that GBHs may be teratogenic. Here we utilize the zebrafish vertebrate model system to study early effects of glyphosate exposure using technical grade glyphosate and the Roundup^® Classic formulation. We find morphological abnormalities including cephalic and …

Marine Disease Impacts, Diagnosis, Forecasting, Management And Policy, Kevin D. Lafferty, Eileen E. Hofmann

CCPO Publications

(First paragraph) As Australians were spending millions of dollars in 2014 to remove the coraleating crown of thorns sea star from the Great Barrier Reef, sea stars started washing up dead for free along North America’s Pacific Coast. Because North American sea stars are important and iconic predators in marine communities, locals and marine scientists alike were alarmed by what proved to be the world’s most widespread marine mass mortality in geographical extent and species affected, especially given its mysterious cause. Investigative research using modern diagnostic techniques implicated a never-before-seen virus [1]. The virus inspired international attention to marine diseases, …

The Sea Among Us: The Amazing Strait Of Georgia By Richard Beamish And Gordon Mcfarlane, Dee Horne Dr.

The Goose

Review of The Sea Among Us: The Amazing Strait of Georgia by Richard Beamish and Gordon McFarlane.

Profiles Of Low Complexity Regions In Apicomplexa, Fabia U. Battistuzzi, Kristan A. Schneider, Matthew K. Spencer, David Fisher, Sophia Chadhry, Ananias A. Escalante

Harold W. Manter Laboratory of Parasitology: Library Materials

Background: Low complexity regions (LCRs) are a ubiquitous feature in genomes and yet their evolutionary history and functional roles are unclear. Previous studies have shown contrasting evidence in favor of both neutral and selective mechanisms of evolution for different sets of LCRs suggesting that modes of identification of these regions may play a role in our ability to discern their evolutionary history. To further investigate this issue, we used a multiple threshold approach to identify species-specific profiles of proteome complexity and, by comparing properties of these sets, determine the influence that starting parameters have on evolutionary inferences.

Results: …

An Animal Victim's Best Chance: Veterinary Legal Duty To Report Cruelty In The U.S., Lora Dunn

Animal Sentience

Legislation throughout the U.S. recognizes animal sentience and the importance of veterinary reporting to combat the ongoing suffering of these animal victims: All 50 states have felony penalties available for animal cruelty crimes, and veterinary reporting is permitted or required in the majority of states. The remaining minority of U.S. states should take action to require veterinarians to report animal cruelty and render veterinarians immune for good faith reporting.

Veterinary Medical Associations Need To Educate Veterinarians For Mandatory Reporting Of Suspected Animal Abuse, Melinda V. Merck

Animal Sentience

When animals are suffering, we have a duty to take action. With appropriate incentive and educational support mandatory veterinary reporting can be a great legal avenue to help ensure their safety and welfare.

Fish Pain's Burden Of Proof, Carl Safina

Animal Sentience

A hypothesis like Key’s, that fish cannot feel pain, should really be stated as a null hypothesis — an assumption that there is no difference in the things being compared. Then evidence — including anecdotal evidence — for and against rejecting the null hypothesis can be examined and weighed. Key (2016a) has proven only that fish lack mammalian brains.

Fire Was In The Reptile’S Mouth: Towards A Transcultural Ecological Poetics, Stuart Cooke

Landscapes: the Journal of the International Centre for Landscape and Language

This paper compares two creation narratives from indigenous peoples on either side of the Pacific Ocean, the relationships between which catalyse the theorisation of a transcultural approach to ecological poetics. The comparison of these narratives reveals important, rhizomatic similarities, and also unmistakable regional differences, concerning the origins of language and culture in Yanomami (Venezuela) and MakMak (Australia) communities. Concomitant with the centrality of indigenous thought in this theorisation of ecopoetics is the de­centrality of human-only conceptions of poetics. Accordingly, the paper considers non-semantic forms of poetics such as birdsong in order to de-centre classically Western, humanist conceptions of language …

Burden Of Proof Lies With Proposer Of Celestial Teapot Hypothesis, Brian Key

Animal Sentience

Bertrand Russell famously imagined the existence of a celestial teapot to highlight that the burden of proof of a hypothesis lay with its proposer and it was not the responsibility of others to refute it. Those who propose that fish feel pain must bear the burden of proof for their hypothesis. There are several common arguments adopted by those defending the position that fish feel pain. For instance, proponents envisage that pain is so important for human survival that they can’t imagine fish could exist without it. Out of this argument from incredulity emerges the idea that pain must have …

Swans: Their Biology And Natural History, Paul A. Johnsgard

Zea E-Books Collection

The seven species of swans of the world are an easily and universally recognized group of waterfowl, which have historically played important roles in the folklore, myths and legends in many of the world’s cultures. Among the largest of all flying birds, they have also almost universally been used as symbols of royalty, grace and beauty, and largely for these reasons swans have only rarely been considered acceptable as targets for sport hunting. Swans occur on all the continents except Africa, although most species are associated with the temperate and arctic zones of North America and Eurasia. Among birds, swans …

Animal Suffering In China, Peter J. Li

Animal Sentience

Chinese policy has been aimed at maximizing GDP; it is time to focus also on minimizing animal suffering.

Science And Sensibility, Bernard E. Rollin

Animal Sentience

The sentience and suffering of animals is obvious to common sense, even if science and industry claim to be agnostic. Economic incentives to reduce the suffering of animals are welcome, but it is not clear whether animals can turn to science for help.

Weathering The End Times, Donald W. Holdridge Sr.

Eruditio Ardescens

“Weathering the End Times” first addresses some of the major arguments for and against man-caused Climate Change, and then portrays where the various elements of Christendom fall within this debate. It goes on to examine the prophetic Scriptures that relate to the environments of the Tribulation, Millennial Kingdom and Eternal State, concluding that God-caused Climate Change is what believers truly need to focus on.

A Profusion Of Parallel Tracks: Why Mongolian Roads Of Dirt And Gravel Branch, Multiply, And Fuse Endlessly, Bill Yake

Landscapes: the Journal of the International Centre for Landscape and Language

A Profusion of Parallel Tracks: Why Mongolian Roads of Dirt and Gravel Branch, Multiply, and Fuse Endlessly

When The Client Is Not The Abuser, But One Of The Abused, Tania Signal

Animal Sentience

The question of client confidentiality and reporting animal abuse is complicated when the client is not the abuser, and when the abuse (of both people and animals) may escalate precisely because it has been (or may be) reported.

Two New Scorpions Of The Genus Chaneke Francke, Teruel Et Santibáñez-López, 2014 (Scorpiones: Buthidae) From Southern Mexico, František Kovařík, Rolando Teruel, Graeme Lowe

Euscorpius

Herein we describe two new species of the recently discovered buthid scorpion genus Chaneke Francke, Teruel et Santibáñez-López, 2014. Both are from Oaxaca State in southern Mexico: Chaneke hofereki sp. n. based upon adults of both sexes from a single coastal locality, and Chaneke baldazoi sp. n. based upon adult females and juveniles from a mountain site in the Sierra Madre. Additional information is given on their taxonomy, distribution, ecology, and reproductive biology, fully complemented with color photos of live and preserved specimens, and their habitat.

Eggshell Pigment Composition Covaries With Phylogeny, Kaat Brulez, Ivan Miksik, Christopher R. Cooney, Mark E. Hauber, Paul George Lovell, Golo Maurer, Steven J. Portugal, Douglas Russell, Silas James Reynolds, Phillip Cassey

Publications and Research

No single hypothesis is likely to explain the diversity in eggshell coloration and patterning across birds, suggesting that eggshell appearance is most likely to have evolved to fulfill many nonexclusive functions. By controlling for nonindependent phylogenetic associations between related species, we describe this diversity using museum eggshells of 71 British breeding passerine species to examine how eggshell pigment composition and concentrations vary with phylogeny and with life-history and nesting ecology traits. Across species, concentrations of biliverdin and protoporphyrin, the two main pigments found in eggshells, were strongly and positively correlated, and both pigments strongly covaried with phylogenetic relatedness. Controlling for …

Editorial: Systems Biology And Ecology Of Microbial Mat Communities, Martin G. Klotz, Donald A. Bryant, Jim K. Fredrickson, William P. Inskeep, Michael Kühl

Publications and Research

No abstract provided.

Phylogeography Of Two Species Of The Genus Apochthonius Chamberlin, 1929, In The Pacific Northwest (Arachnida, Pseudoscorpiones), Brandi Lynn Welch

Dissertations and Theses

I used mitochondrial COI sequence data from forty one individuals to investigate phylogenetic relationships among populations of two morphologically similar species of the pseudoscorpion genus Apochthonius, A. minimus and A. occidentalis, in western Washington, Oregon, and northern California. My goal was to assess whether genetic structure in the two species was congruent with geography. Many plant and animal species in the Pacific Northwestern United States have shown patterns of genetic differentiation that follow both north-south and east-west trends, indicating that geologic and climatic events in the past separated populations to the extent that they became genetically differentiated. A distinct geographic …

Preservation Of Three-Dimensional Anatomy In Phosphatized Fossil Arthropods Enriches Evolutionary Inference, Achim H. Schwermann, Tomy Dos Santos Rolo, Michael S. Caterino, Gunter Bechly, Heiko Schmied, Tilo Baumbach, Thomas Van De Kamp

Publications

External and internal morphological characters of extant and fossil organisms are crucial to establishing their systematic position, ecological role and evolutionary trends. The lack of internal characters and soft-tissue preservation in many arthropod fossils, however, impedes comprehensive phylogenetic analyses and species descriptions according to taxonomic standards for Recent organisms. We found well-preserved three-dimensional anatomy in mineralized arthropods from Paleogene fissure fillings and demonstrate the value of these fossils by utilizing digitally reconstructed anatomical structure of a hister beetle. The new anatomical data facilitate a refinement of the species diagnosis and allowed us to reject a previous hypothesis of close phylogenetic …

Comparative Population Genomics Of Latitudinal Variation In Drosophila Simulans And Drosophila Melanogaster, Heather E. Machado, Alan O. Bergland, Katherine R. O'Brien, Emily L. Behrman, Paul S. Schmidt, Dmitri A. Petrov

School of Biological Sciences: Faculty Publications

Examples of clinal variation in phenotypes and genotypes across latitudinal transects have served as important models for understanding how spatially varying selection and demographic forces shape variation within species. Here, we examine the selective and demographic contributions to latitudinal variation through the largest comparative genomic study to date of Drosophila simulans and Drosophila melanogaster, with genomic sequence data from 382 individual fruit flies, collected across a spatial transect of 19 degrees latitude and at multiple time points over 2 years. Consistent with phenotypic studies, we find less clinal variation in D. simulans than D. melanogaster, particularly for the autosomes. Moreover, …

Beyond The Adaptationist Legacy: Updating Our Teaching To Include A Diversity Of Evolutionary Mechanisms, Rebecca M. Price, Kathryn E. Perez

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

A paradigm shift away from viewing evolution primarily in terms of adaptation - the "adaptationist programme" of Gould and Lewontin - began in evolutionary research more than 35 years ago, but that shift has yet to occur within evolutionary education research or within teaching standards. We review three instruments that can help education researchers and educators undertake this paradigm shift. The instruments assess how biology undergraduates understand three evolutionary processes other than natural selection: genetic drift, dominance relationships among allelic pairs, and evolutionary developmental biology (evo-devo). Testing with these instruments reveals that students often explain a diversity of evolutionary mechanisms …

High Genetic Diversity But Low Population Structure In The Frog Pseudopaludicola Falcipes (Hensel, 1867) (Amphibia, Anura) From The Pampas Of South America, José A. Langone, Arley Camargo, Rafael O. De Sá

Biology Faculty Publications

Relative to South America’s ecoregions, the temperate grasslands of the Pampas have been poorly studied from a phylogeographic perspective. Based on an intermediate biogeographic setting between subtropical forest (Atlantic Forest) and arid ecosystems (Chaco and Patagonia), Pampean species are expected to show unstable demographic histories due to the Quaternary climatic oscillations. Herein, we investigate the phylogenetic relatedness and phylogeographic history of Pseudopaludicola falcipes, a small and common frog that is widely distributed across the Pampean grasslands. First, we use molecular data to assess if P. falcipes represents a single or multiple, separately evolving cryptic lineages. Because P. falcipes is …

Gascoyne Demersal Scalefish Managed Fishery, Department Of Fisheries

Fisheries Occasional Publications

An operators’ guide to the management arrangements 1 September 2015 – 31 August 2016.

Effect Of Grazing Prairie Dog—Colonized Rangeland On Cattle Nutrition And Performance: A Progress Report, Kenneth C. Olson, Christopher Schauer, Chanda Engel, Janna J. Kincheloe, Jameson R. Brennan, Ben L. Hauptman

Natural Resource Management Faculty Publications

On the Ground

• One objective of the ongoing Renewal on Standing Rock Reservation project is to evaluate the response of grazing steers to the level of prairie dog colonization on Northern Mixed Grass Prairie.
• We fenced four pastures to create an increasing gradient of a proportion of the pasture area colonized by prairie dogs. Pastures are stocked with yearling steers during each growing season.
• Comparing steer performance, Global Positioning System (GPS) locations of grazing, diet samples, and ingestive behavior at each proportion of the prairie dog colony per pasture allows prediction of the optimal proportion of colonization, which enables selection …

Use Of Ecological Sites In Managing Wildlife And Livestock: An Example With Prairie Dogs, John R. Hendrickson, Patricia S. Johnson, Mark A. Liebig, Kevin K. Sedivec, Gary A. Halvorson

Natural Resource Management Faculty Publications

On the Ground

• The perception of prairie dogs among Native Americans living on the Standing Rock Sioux Reservation is mixed. Some Native Americans focus on the loss of forage productivity, whereas others are interested in the cultural and ecological aspects of prairie dogs.
• The use of ecological sites may provide a mechanism for developing a management framework that would consider both livestock and prairie dogs.
• The three ecological sites we surveyed had large differences in off-colony standing crop, but in 2 of the 3 years we surveyed, there were no differences between standing crop on-colony.
• This suggests that management of …

The Ecological Succession Of Mosquitoes Inhabiting Waste Tires In A Subtropical Swamp And Upland Forest In Central West Florida, Emily Thuong Nguyen Dinh

USF Tampa Graduate Theses and Dissertations

Literature has not yet seen a contribution involving the description of successional patterns of mosquitoes (Diptera: Culicidae) inhabiting discarded automobile tires in sylvan areas nor an investigation into the macro- and micro-environmental factors that may influence the seasonal shifts in species composition and abundance in that respective habitat. Waste tires in undeveloped forests are a hazard to human and animal health because they can support a population of vector mosquitoes. Locating productive waste tire mosquito habitats is problematic in wooded areas but is crucial for diminishing pathogen transfer in areas where humans have regular access to forests because of possible …