Ecology and Evolutionary Biology Commons^™

The Small Mammals Of Two Dune Communities In Southeastern Virginia, Robert K. Rose, Justin L. Sweitzer

Virginia Journal of Science

Small mammals were surveyed using live and pitfall traps between the primary and secondary dunes at two locations on the shores of the Chesapeake Bay near the Atlantic Ocean: Little Creek Amphibious Base in Norfolk and Joint Expeditionary Base Fort Story in Virginia Beach, Virginia. Captures were dominated by house mice (Mus musculus) in interdunal habitats with sparse grass, whereas white-footed mice (Peromyscus leucopus) were found primarily in shrubby live-oak thickets on the tops of dunes. Hispid cotton rats (Sigmodon hispidus) were present only at Fort Story, and then only in patches of dense …

The Causes And Consequences Of Individual Variation In Parental Care Behavior, Daniel P. Wetzel

Theses and Dissertations--Biology

Behavioral traits can be remarkably flexible depending on the conditions in which they are expressed, yet, in spite of this flexibility, persistent differences between individuals appear to limit the potential expression of behaviors. For example, despite evidence that parents provide variable amounts of parental care in response to changing environmental conditions, they also differ in the overall level of care they provide. I used a behavioral reaction norm approach to study individual variation in parental care behavior in free-living house sparrows (Passer domesticus). I investigated the nature of this variation by studying the relationship between different forms of …

Axolotl Paedomorphosis: A Comparison Of Juvenile, Metamorphic, And Paedomorphic Ambystoma Mexicanum Brain Gene Transcription, Carlena Johnson

Theses and Dissertations--Biology

Unlike many amphibians, the paedomorphic axolotl (Ambystoma mexicanum) rarely undergoes external morphological changes indicative of metamorphosis. However, internally, some axolotl tissues undergo cryptic metamorphic changes. A previous study examined interspecific patterns of larval brain gene expression and found that these species exhibited unique temporal expression patterns that were hypothesized to be morph specific. This thesis tested this hypothesis by examining differences in brain gene expression between juvenile (JUV), paedomorphic (PAED), and metamorphic (MET) axolotls. I identified 828 genes that were expressed differently between JUV, PAED, and MET. Expression estimates from JUV were compared to estimates from PAED and …

Selective Utilization Of Microhabitats By Web-Building Spiders, Kelton D. Welch

Theses and Dissertations--Entomology

Natural enemies are members of complex ecological communities, and their ability to contribute to the biological control of pest organisms is strongly influenced by a convoluted network of ecological interactions with many other organisms within these communities. Researchers must develop an understanding of the mechanisms that shape trophic webs to predict and promote top-down effects of predators. The behavior of predators can have a strong influence on their potential as biological control agents.

Web-building spiders are a useful example organism for the study of natural enemy behavior because of the experimentally tractable nature of their foraging behavior. Specifically, patterns in …

Spring Clipping, Fire, And Simulated Increased Atmospheric Nitrogen Deposition Effects On Tallgrass Prairie Vegetation, Alexander J. Smart, Tabitha K. Scott, Sharon A. Clay, David E. Clay, Michelle K. Ohrtman, Eric M. Mousel

Agronomy, Horticulture and Plant Science Faculty Publications

Defoliation aimed at introduced cool-season grasses, which uses similar resources of native grasses, could substantially reduce their competitiveness and improve the quality of the northern tallgrass prairie. The objective was to evaluate the use of early season clipping and fire in conjunction with simulated increased levels of atmospheric nitrogen deposition on foliar canopy cover of tallgrass prairie vegetation. This study was conducted from 2009 to 2012 at two locations in eastern South Dakota. Small plots arranged in a split-plot treatment design were randomized in four complete blocks on a warm-season grass interseeded and a native prairie site in east-central South …

Temperature And Functional Traits Influence Differences In Nitrogen Uptake Capacity Between Native And Invasive Grasses, A. Joshua Leffler, Jeremy J. James, Thomas A. Monaco

Natural Resource Management Faculty Publications

Performance differences between native and exotic invasive plants are often considered static, but invasive grasses may achieve growth advantages in western North America shrublands and steppe under only optimal growing conditions. We examine differences in N uptake and several morphological variables that influence uptake at temperatures between 5 and 25 C. We contrast two native perennial grasses in western North America: Elymus elymoides and Pseudoroegneria spicata; two invasive annual grasses: Bromus tectorum and Taeniatherum caputmedusae; and one highly selected non-native perennial grass: Agropyron cristatum. The influence of temperature on N uptake is poorly characterized, yet these invasive annual grasses are …

Topographic Home Range Of Large Mammals: Is Planimetric Home Range Still A Viable Method?, W. David Walter, Justin W. Fischer, Teresa J. Fink, Scott E. Hygnstrom, Jonathan A. Jenks, Kurt C. Vercauteren

Natural Resource Management Faculty Publications

Topography influences movement trajectories, quality of forages used, and behavioral response of large herbivores to anthropogenic disturbances, but research is lacking on the influence of terrain complexity on size of home range. Size of home range usually is based on planimetric area and therefore rarely accounts for the true surface area traversed by an animal. We conducted radiotelemetry on bighorn sheep (Ovis canadensis), Rocky Mountain elk (Cervus elaphus), mule deer (Odocoileus hemionus), and white-tailed deer (O. virginianus) equipped with VHF collars at three sites from 2002 to 2006 to document size of home range in areas that ranged from 400 …

Genetic Diversity Of North American Captive-Born Gorillas (Gorilla Gorilla Gorilla), Noah D. Simmons, Ronald S. Wagner, Joseph G. Lorenz

All Faculty Scholarship for the College of the Sciences

Western lowland gorillas (Gorilla gorilla gorilla) are designated as critically endangered and wild populations are dramatically declining as a result of habitat destruction, fragmentation, diseases (e.g., Ebola) and the illegal bushmeat trade. As wild populations continue to decline, the genetic management of the North American captive western lowland gorilla population will be an important component of the long‐term conservation of the species. We genotyped 26 individuals from the North American captive gorilla collection at 11 autosomal microsatellite loci in order to compare levels of genetic diversity to wild populations, investigate genetic signatures of a population bottleneck and identify …

Seeds Of Resistance: Towards A Revolutionary Critical Ecopedagogy, Peter Mclaren

Education Faculty Articles and Research

The death throes of mother earth are imminent unless we decelerate the planetary ecological crisis. Critical educators, who have addressed with firm commitment topics of race, class, gender, sexuality, disability, and other social justice issues are casting their eyes to the antagonism between capitalism and nature to ask themselves how we can rationally regulate the human metabolic relation with nature. As the global power complex reduces human life and mother earth to mere production and consumption, critical revolutionary ecopedagogy is developing new, unalienated forms of selfpresence. Ecopedagogy is inspired by and inspires a new social arc, rooted in practices of …

Microsatellite Analysis Of Trophy Largemouth Bass From Arkansas Reservoirs, K. A. Lamothe, Ronald L. Johnson

Journal of the Arkansas Academy of Science

The Arkansas Game and Fish Commission (AGFC) has introduced Florida largemouth bass (FLMB; Micropterus salmoides floridanus) to water bodies historically containing the northern largemouth bass (NLMB; Micropterus salmoides salmoides) subspecies since the late 1970s in an attempt to produce a trophy LMB fishery. Since 2006, the AGFC has been biannually sampling reservoirs stocked with FLMB to determine levels of admixture. Here, total sampling efforts between 2006 and 2011 have been combined, and LMB heavier than 2,268 g (5 lb) were analyzed in an effort to investigate distribution of bass by their genetic composition designated as trophy LMB by the AGFC. …

Pushing Taxonomy To Extiction?, Alessandro Minelli, Annemarie Ohler, Erna Aescht, Aaron Bauer, Lucio Bonato, Roger Bour, Marcelo Rodrigues De Carvalho, Rafael O. De Sá, Et Al.

Biology Faculty Publications

Can we describe all species on Earth before they disappear? We argue that this is possible only by endowing taxonomy with professional manpower and appropriate material resources as required by big science.

Contrary to Costello et al.’s (CMS) (1) statements, taxonomy is not an easy discipline accessible to all through a smartphone. It requires exhaustive training and long familiarity with field, specimens and literature (2).

CMS’s argument is framed in terms of species numbers, but different, non-overlapping species concepts apply to bacteria, brambles and birds (3,4,5): “the species” as common unit of biodiversity does not exist (6).

Even ignoring this …

Threats And Knowledge Gaps For Ecosystem Services Provided By Kelp Forests: A Northeast Atlantic Perspective, Dan A. Smale, Michael T. Burrows, Philippa J. Moore, Nessa O'Connor, Stephen J. Hawkins

Research outputs 2013

Kelp forests along temperate and polar coastlines represent some of most diverse and productive habitats on the Earth. Here, we synthesize information from >60 years of research on the structure and functioning of kelp forest habitats in European waters, with particular emphasis on the coasts of UK and Ireland, which represents an important biogeographic transition zone that is subjected to multiple threats and stressors. We collated existing data on kelp distribution and abundance and reanalyzed these data to describe the structure of kelp forests along a spatial gradient spanning more than 10° of latitude. We then examined ecological goods and …

Coastal Bacterioplankton Community Dynamics In Response To A Natural Disturbance, Sara K. Yeo, Megan J. Huggett, Alexander Eiler, Michael Rappe

Research outputs 2013

In order to characterize how disturbances to microbial communities are propagated over temporal and spatial scales in aquatic environments, the dynamics of bacterial assemblages throughout a subtropical coastal embayment were investigated via SSU rRNA gene analyses over an 8-month period, which encompassed a large storm event. During non-perturbed conditions, sampling sites clustered into three groups based on their microbial community composition: an offshore oceanic group, a freshwater group, and a distinct and persistent coastal group. Significant differences in measured environmental parameters or in the bacterial community due to the storm event were found only within the coastal cluster of sampling …

Sturgis And Kay Mckeever Papers, Zach S. Henderson Library Special Collections

Finding Aids

This collection consists of the papers of Georgia Southern University biology professor Sturgis McKeever and other materials related to the McKeever family, particularly his wife, Kay McKeever, and his brothers Ivan and Kermit McKeever. The materials span 1935–2005 and are predominantly professional in nature, including numerous research reprints and publications on animal species across North America, correspondence between McKeever and other researchers, and handwritten graphs, charts, and research notes. The collection also contains photographic materials, including photographic slides and negatives documenting his research. The recent accrual expands the collection to include personal correspondence between Sturgis and Kay McKeever, as well …

Evaluating The Utility Of Beaver Reintroduction Programs For Enhancing Habitat For Rainbow Trout And Steelhead, Jonathan Rodger Hegna

All Master's Theses

Beaver reintroduction programs are increasingly being viewed as a way to enhance salmonid habitat and production. However, the actual effectiveness of using beavers as a habitat enhancement tool for ESA listed steelhead Oncorhynchus mykiss populations is unknown. We examined the type of habitat, at both the microhabitat and mesohabitat levels, preferred by steelhead in three small streams in the upper Yakima Basin, WA through standard snorkel surveys and habitat measurements. Our results suggest that steelhead in small streams strongly prefer (relative to availability) microhabitats that have deeper water(> 30 cm), slow stream velocities(< 0 .05 mis), and complex cover types. Habitat partitioning among the size-classes (small< 50 mm, medium 50-90 mm, large> 90 mm total length, TL) principally operated …

Applying The Principles Of Spatial Modelling To The Management Of Biodiversity In The Fragmented Landscapes Of South-Western Australia, Shaun Molloy

Theses: Doctorates and Masters

Biodiversity conservation throughout the world is challenged by the impacts of a changing climate on fragmented landscapes. To mitigate these threats, conservation managers require models which can demonstrate the consequences of both negative impacts and management actions. This need can be addressed through spatial modelling applications. Unfortunately, throughout much of the world, spatial modelling is forgone, being seen as requiring skills and resources beyond the means of many conservation planners and managers. This thesis seeks to address this dilemma by delivering criteria for a successful modelling application and by providing case studies which demonstrate how appropriate modelling can be undertaken …

Phosphorus Cycling In The Sargasso Sea: Investigation Using The Oxygen Isotopic Composition Of Phosphate, Enzyme-Labeled Fluorescence, And Turnover Times, Karen Mclaughlin, Jill A. Sohm, Gregory A. Cutter, Michael W. Lomas, Adina Paytan

OES Faculty Publications

Dissolved inorganic phosphorus (DIP) concentrations in surface water of vast areas of the ocean are extremely low (<10 nM) and phosphorus (P) availability could limit primary productivity in these regions. We explore the use of oxygen isotopic signature of dissolved phosphate (δ¹⁸O_PO4) to investigate biogeochemical cycling of P in the Sargasso Sea, Atlantic Ocean. Additional techniques for studying P dynamics including ³³P-based DIP turnover time estimates and percent of cells expressing alkaline phosphatase (AP) activity as measured by enzyme-labeling fluorescence are also used. In surface waters, δ¹⁸O_PO4 values were lower than equilibrium by 3–6%, indicative of dissolved organic phosphorous (DOP) remineralization by extracellular enzymes. An isotope mass balance model using a variety of possible combinations of …

Physiological And Behavioral Mechanisms Of Range Expansion In The House Sparrow (Passer Domesticus), Andrea Lyn Liebl

USF Tampa Graduate Theses and Dissertations

Introduced species cause both considerable ecological and economic damage every year. However, not much is known about how certain species are able to establish and spread beyond the site of initial introduction, whereas others do not. Species undergoing range expansion following an introduction may prove to be a valuable resource to invasion biology, but may also be informative in light of species' responses to changing environments (i.e. global climate change). Here, I took advantage of an ongoing range expansion of an introduced vertebrate species. House sparrows (Passer domesticus) were introduced to Mombasa, Kenya in the 1950s and have subsequently expanded …

Understanding Amphibian Decline: The Role Of Pesticides And The Pathogenic Chytrid Fungus On Amphibians And Aquatic Communities, Taegan A. Mcmahon

USF Tampa Graduate Theses and Dissertations

Amphibians are the most threatened taxon on the planet. Declines have been associated with over-exploitation, habitat loss, pollution, and pathogenic diseases, but of these factors, pollution and disease have been relatively under-studied. Here, I investigated: 1) the impacts of commonly used pesticides on aquatic communities, 2) the effect of these pesticides on amphibian susceptibility to the pathogenic chytrid fungus, Batrachochytrium dendrobatidis (Bd), and 3) whether there are non-amphibian hosts of Bd and 4) how to best quantify the survival of Bd through ontogeny of the host.

In my first research chapter, I quantified the effects of environmentally relevant concentrations of …

Evaluating Habitat Vulnerability And Sustainability Of Urban Seagrass Resources To Sea Level Rise, Cynthia A. Meyer

USF Tampa Graduate Theses and Dissertations

The seagrass resource provides essential ecosystem functions for many marine species. This research evaluated the vulnerability and sustainability of the seagrass resource in an urbanized area to the effects of sea level rise. The assessment required analysis of information regarding the biogeography of the seagrass resource, and developing a method to model the spatial extent of the suitable habitat for seagrass, and applying the model to predict the implications of simulated sea level rise scenarios on the seagrass resource.

Examining the biogeography of the seagrass resource required the development of a seagrass monitoring and assessment field survey and a comprehensive …

Daily Temperature Fluctuations Unpredictably Influence Developmental Rate And Morphology At A Critical Early Larval Stage In A Frog, Juliana M. Arrighi, Ezra S. Lencer, Advait Jukar, Daesik Park, Patrick C. Phillips, Robert H. Kaplan

Complex Systems Faculty Publications and Presentations

Background: Environmental temperature has profound consequences for early amphibian development and many field and laboratory studies have examined this. Most laboratory studies that have characterized the influence of temperature on development in amphibians have failed to incorporate the realities of diel temperature fluctuations (DTF), which can be considerable for pond-breeding amphibians.

Results: We evaluated the effects of different ecologically relevant ranges of DTF compared with effects of constant temperatures on development of embryos and larvae of the Korean fire-bellied toad (Bombina orientalis). We constructed thermal reaction norms for developmental stage, snout- vent length, and tail length by fitting …

Ecological Interactions Influencing Avicennia Germinans Propagule Dispersal And Seedling Establishment At Mangrove-Saltmarsh Boundaries, Jennifer Mcclain Peterson

USF Tampa Graduate Theses and Dissertations

Mangroves and saltmarshes are ecologically important coastal ecosystems; unfortunately, these low-lying coastal ecosystems are vulnerable to global climate change. As sea-levels rise, mangroves are expected to shift their distribution landward towards higher elevation sites that are occupied by other plants, including saltmarsh taxa. Therefore, mangrove recruits at the leading edge of expansion may interact with diverse assemblages of saltmarsh plants, and these interactions could influence the success of mangrove encroachment into higher tidal-elevation areas. The purpose of the research presented here was to investigate empirically the ecological interactions that may influence the recruitment of the black mangrove, Avicennia germinans, …

Influence Of Vegetation Removal And Altering Water Levels On Co2 Flux Rates Of A Northern Bog, Laura M. Matkala

Dissertations, Master's Theses and Master's Reports - Open

Boreal peatlands contain approximately one third of the global soil carbon and are considered net sinks of atmospheric CO2. Water level position is one of the main regulators of CO2 fluxes in northern peatlands because it controls both the thickness of the aerobic layer in peat and plant communities. However, little is known about the role of different plant functional groups and their possible interaction with changing water level in boreal peatlands with regard to CO2 cycling. Climate change may also accelerate changes in hydrological conditions, changing both aerobic conditions and plant communities. To help answer these questions, this study …

Carbon In The Peatlands In The Great Lakes Region, Cassandra A. Ott

Dissertations, Master's Theses and Master's Reports - Open

Peatlands cover only ~3% of the global land area, but store ~30% of the worlds' soil carbon. There are many different peat types that store different amounts of carbon. Most inventories of carbon storage in northern peatlands have been conducted in the expansive Sphagnum dominated peatlands. Although, northern white cedar peatlands (NW cedar, Thuja occidentalis L.) are also one of the most common peatland types in the Great Lakes Region, occupying more than 2 million hectares. NW cedar swamps are understudied, due in part to the difficulties in collection methods. General lack of rapid and consistent sampling methods has also …

Spatial And Temporal Patterns In Ungulate-Ecosystem Interactions, Bryan D. Murray

Dissertations, Master's Theses and Master's Reports - Open

Ungulates are important components of a variety of ecosystems worldwide. This dissertation integrates aspects of ungulate and forest ecology to increase our understanding of how they work together in ways that are of interest to natural resource managers, educators, and those who are simply curious about nature. Although animal ecology and ecosystem ecology are often studied separately, one of the general goals of this dissertation is to examine how they interact across spatial and temporal scales. Forest ecosystems are heterogeneous across a range of scales. Spatial and temporal habitat use patterns of forest ungulates tend to be congregated in patches …

The Biology And Ecology Of Epinephilidae Speciea And Their Implications To Fisheries Management, Jason R. How

Theses: Doctorates and Masters

This thesis examines the biological and ecological aspects of members of the globally exploited Epinephilidae with reference to fisheries management and in particular the use of closures. The leopard coralgrouper Plectropomus leopardus is a common reef fish throughout the Indo-Pacific region and a major target of both commercial and recreational fisheries. There has been limited research on this species in the eastern Indian Ocean, where there are only two populations. An examination of the species found a number of significant biological differences to their eastern Australian con-specifics. Most noticeable was the strong size-related cue over their protogynous sex change. The …

Insight Into Human Brain Evolution Through Phylogenetic Analysis And Comparative Genomics, Amy Marie Boddy

Wayne State University Dissertations

As a species, humans are often considered to be unique among mammals, with respect to their large brain size and enhanced cognitive abilities. Humans are the most encephalized mammals, with a brain that is six times larger than expected relative to body mass. Presumably, it is this high degree of encephalization that underlies our advanced cognitive abilities, including the skills needed for complex language and culture. Understanding how large brains evolved can shed light on what makes the human brain unique and introduce possible mechanism for human specific neurodegenerative diseases. This study takes a both a phenotypic and molecular approach …

Platyrrhine Phylogenetics With A Focus On Callitrichine Life History Adaptations, Natalie Mae Jameson

Wayne State University Dissertations

The life history of a species is highly impacted by their reproductive strategy. In my dissertation I address the changing reproductive strategies in callitrichine New World monkeys and their genetic underpinnings using a phylogenetic approach. The necessity for a resolved phylogeny is universal to any comparative genomic study. Here we have constructed a reliable phylogenetic framework from which reproductive strategy could be studied in callitrichines. First, to determine the most recent common ancestor of Anthropoid primates we took a phylogenomic approach, using the publicly available whole genome sequences of 17 mammal species. With high confidence, we determined here that Tarsier …

Winter Behavior And Ecology Of Eastern Bluebirds (Sialia Sialis): Home Ranges, Habitat Use, And Effect Of Weather On Foraging Behavior, Todd J. Weinkam

Online Theses and Dissertations

Eastern bluebirds (Sialia sialis) are widespread across eastern North America, but populations appear to be susceptible to extreme winter weather. Declines in population following cold winters in states like Kentucky suggest the need to better understand winter-specific habitat requirements and behavioral responses to inclement weather. My objectives were to 1) describe the size and habitat composition of the home ranges of wintering bluebirds, and 2) examine the effects of weather (i.e., temperature, wind speed, and snow presence) on habitat occupancy, group size, and foraging behavior. My study was conducted at the Blue Grass Army Depot in Madison County, …

Habitat Associations Of Stream-Dwelling Salamanders At Multiple Spatial Scales In Central Kentucky Headwaters., John Mark Yeiser

Online Theses and Dissertations

Headwater stream systems are productive habitats that are often at risk of human perturbation, and it is crucial that ecologists understand natural patterns and processes within these ecosystems. Using a multi-scale approach, I investigated factors influencing habitat associations of Ambystoma barbouri (streamside salamander) and Eurycea cirrigera (southern two-lined salamander) in a relatively undisturbed stream network in central Kentucky. I used likelihood ratio G-tests to identify associations between species and mesohabitat types (i.e., runs, riffles, and pools). I used second order Akaike's Information Criterion (AICc) model selection to predict patterns of presence and abundance throughout headwater reaches. Fine-scale abiotic …