Ecology and Evolutionary Biology Commons^™

An Overview On The State Of Equus Hemionus In Whole China, Weikang Yang

Erforschung biologischer Ressourcen der Mongolei / Exploration into the Biological Resources of Mongolia, ISSN 0440-1298

The wild ass in China is divided into two species: Gobi khulan (Equus hemionus) and kiang (Equus kiang). Maps and charts of the distribution and population sizes in China and Mongolia of each species are shown from the 1980s through the early 2000s.

Review Of Jewish Tradition And The Challenge Of Darwinism, Geoffery Cantor And Marc Swetlitz, Eds., Daniel M. Stoebel

All HMC Faculty Publications and Research

This is a book review.

Distribution And Conservation Genetics Of The Cow Knob Salamander, Plethodon Punctatus Highton (Caudata: Plethodontidae), Matthew R. Graham

Theses, Dissertations and Capstones

Being lungless, plethodontid salamanders respire through their skin and are especially sensitive to environmental disturbances. Habitat fragmentation, low abundance, extreme habitat requirements, and a narrow distribution of less than 70 miles in length, makes one such salamander, Plethodon punctatus, a species of concern (S1) in West Virginia. To better understand this sensitive species, day and night survey hikes were conducted through ideal habitat and coordinate data as well as tail tips (10 to 20 mm in length) were collected. DNA was extracted from the tail tips and polymerase chain reaction (PCR) was used to amplify mitochondrial 16S rRNA gene fragments. …

Subadult Female Experience Does Not Influence Species Recognition In The Wolf Spider Schizocosa Uetzi Stratton 1997, Eileen Hebets

Eileen Hebets Publications

In many vertebrate systems, early experience has been linked to the learning of species specific traits that are subsequently assessed during mate choice, thus ensuring conspecific matings. In invertebrate systems, however, early experience was not thought to play a role in mate choice until a recent study using Schizocosa uetzi Stratton 1997 wolf spiders demonstrated that females mate more readily with males of a familiar versus unfamiliar phenotype. The function of early mate choice learning in this system is not yet known, but a role in learning species-specific traits seems unlikely. In northwestern Mississippi, S. uetzi is found sympatrically …

The Effects Of Deer And Non-Native Invasive Plants On Native Plants: Demonstration Area In The Gordon Natural Area On The Campus Of West Chester University Of Pennsylvania, West Chester, Chester County: Base-Line Plant Data, Kim Tesoriero, Harry Tiebout, Gerard Hertel

Deer and Non-native Invasive Plant Impact Study Documents

No abstract provided.

Origins And Mariner 10 (Faith & Science Update), John T. Baldwin

Perspective Digest

No abstract provided.

Status, Distribution, And Density Of White-Tailed Jackrabbits And Black-Tailed Jackrabbits In South Dakota, Dustin J. Schaible

Electronic Theses and Dissertations

The status of jackrabbit (Lepus spp.) populations throughout the Northern Great Plains has been a cause for concern by wildlife managers in recent years and there has been a paucity of information about the ecology of the white-tailed jackrabbit (Lepus townsendii) and the black-tailed jackrabbit (Lepus californicus) in South Dakota. Since there have been little monitoring efforts for hares, 21 permanent spotlight line transects were established across South Dakota for future surveying efforts. These transects were surveyed to obtain baseline information about jackrabbit density and distribution throughout the state. Jackrabbit density was highest in the northwestern portions of the state …

Maptogenome: A Comparative Genomic Tool That Aligns Transcript Maps To Sequenced Genomes, Srikrishna Putta, Jeramiah J. Smith, Chuck Staben, S. Randal Voss

Biology Faculty Publications

Efforts to generate whole genome assemblies and dense genetic maps have provided a wealth of gene positional information for several vertebrate species. Comparing the relative location of orthologous genes among these genomes provides perspective on genome evolution and can aid in translating genetic information between distantly related organisms. However, large-scale comparisons between genetic maps and genome assemblies can prove challenging because genetic markers are commonly derived from transcribed sequences that are incompletely and variably annotated. We developed the program MapToGenome as a tool for comparing transcript maps and genome assemblies. MapToGenome processes sequence alignments between mapped transcripts and whole genome …

Vegetation Re-Establishment Of Mojave Desert Plant Communities After 2005-2006 Wildland Fires, E. Cayenne Engel, Scott R. Abella

Fire Science Presentations

Examine biotic and abiotic patterns that determine vegetative regrowth after wildfires to better inform land managers about what to expect after fires and how to manage restoration efforts.

Seeding Effectiveness For Eight Mojave Desert Perennials After A 2005 Wildfire, E. Cayenne Engel, Scott R. Abella, Christina L. Lund

Fire Science Presentations

To assess BLM seeding effectiveness in a mid-elevation burn where pre-burn plant communities were dominated by blackbrush, Joshua trees, and creosote.

Past, Present, And Future Old Growth In Frequent-Fire Conifer Forests Of The Western United States, Scott R. Abella, W. Wallace Covington, Peter Z. Fule, Leigh B. Lentile, Andrew J. Sanchez Meador, Penelope Morgan

Public Policy and Leadership Faculty Research

Old growth in the frequent-fire conifer forests of the western United States, such as those containing ponderosa pine (Pinus ponderosa), Jeffrey pine (P. jeffreyi), giant sequoia (Sequioa giganteum) and other species, has undergone major changes since Euro-American settlement. Understanding past changes and anticipating future changes under different potential management scenarios are fundamental to developing ecologically based fuel reduction or ecological restoration treatments. Some of the many changes that have occurred in these forests include shifts from historically frequent surface fire to no fire or to stand-replacing fire regimes, increases in tree density, increased abundance of fire-intolerant trees, decreases in understory …

Improved Parameterization To Invert Rayleigh-Wave Data For Shallow Profiles Containing Stiff Inclusions, Carlos Calderon-Macias, Barbara Luke

Civil and Environmental Engineering and Construction Faculty Research

Inversion of shear-wave velocity profiles from phase-velocity measurements of Rayleigh-wave energy for sites containing stiff layers can be erroneous if such layers are not characterized in the starting or reference model. Incorporation of a priori knowledge then is key for converging upon a realistic or meaningful solution. Resolving soil profiles in desert regions where stiff layers cemented with calcium carbonate are intermixed with softer, uncemented media is an application for which locating shallow stiff inclusions has important implications. Identification of the stiff layers is critical for foundation design and cost estimating of excavations. A parameterization that seems adequate for this …

Winter 2007, Nsu Oceanographic Center

Currents

No abstract provided.

Does Increasing Biology Teacher Knowledge Of Evolution And The Nature Of Science Lead To Greater Advocacy For The Teaching Of Evolution In Schools?, Ross Nehm, Irvin Sam Schonfeld

Publications and Research

This study investigated whether or not an increase in secondary science teacher knowledge about evolution and the nature of science gained from completing a graduate-level evolution course was associated with greater preference for the teaching of evolution in schools. Forty-four precertified secondary biology teachers participated in a 14-week intervention designed to address documented misconceptions identified by a precourse instrument. The course produced statistically significant gains in teacher knowledge of evolution and the nature of science and a significant decrease in misconceptions about evolution and natural selection. Nevertheless, teachers' postcourse preference positions remained unchanged; the majority of science teachers still preferred …

Ocpat: An Online Codon-Preserved Alignment Tool For Evolutionary Genomic Analysis Of Protein Coding Sequences, Guozhen Liu, Monica Uddin, Munirul Islam, Morris Goodman, Lawrence I. Grossman, Roberto Romero, Derek E. Wildman

Wayne State University Associated BioMed Central Scholarship

Abstract

Background

Rapidly accumulating genome sequence data from multiple species offer powerful opportunities for the detection of DNA sequence evolution. Phylogenetic tree construction and codon-based tests for natural selection are the prevailing tools used to detect functionally important evolutionary change in protein coding sequences. These analyses often require multiple DNA sequence alignments that maintain the correct reading frame for each collection of putative orthologous sequences. Since this feature is not available in most alignment tools, codon reading frames often must be checked manually before evolutionary analyses can commence.

Results

Here we report an online codon-preserved alignment tool (OCPAT) that generates …

A Scent-Station Survey Of Medium-Size Mammals On The Callaway Preserve, Harris County, Georgia, Anna-Maria Giacobello

Theses and Dissertations

The objective of this project was to determine the relative abundance of medium- sized mammals on the Callaway Preserve in Harris County, Georgia, using the scent- station technique, to determine species preference in regard to habitat, to compare relative abundance of species in regard to habitat, and to compare habitats in terms of the species present. Thirty-six scent-stations were established on the property and monitored to observe the presence of coyotes, raccoons, armadillos, foxes, opossums, and skunks. Of the total number of visits to the scent-stations, 36.36 % were coyotes, 18.18% were foxes 22.73% were armadillos, and 22.73% were raccoons. …

Bottom-Up Forcing And The Decline Of Steller Sea Lions (Eumetopias Jubatus) In Alaska: Assessing The Ocean Climate Hypothesis, Andrew W. Trites, Arthur J. Miller, Michael A. Alexander, Steven J. Bograd, John A. Calder, Antonietta Capotondi, Kenneth O. Coyle, Emanuele Di Lorenzo, Bruce P. Finney, Edward J. Gregr, Chester E. Grosch, Thomas C. Royer

CCPO Publications

Declines of Steller sea lion ( Eumetopias jubatus) populations in the Aleutian Islands and Gulf of Alaska could be a consequence of physical oceanographic changes associated with the 1976–77 climate regime shift. Changes in ocean climate are hypothesized to have affected the quantity, quality, and accessibility of prey, which in turn may have affected the rates of birth and death of sea lions. Recent studies of the spatial and temporal variations in the ocean climate system of the North Pacific support this hypothesis. Ocean climate changes appear to have created adaptive opportunities for various species that are preyed upon …

Response Of Eelgrass Zostera Marina To Co2 Enrichment: Possible Impacts Of Climate Change And Potential For Remediation Of Coastal Habitats, Sherry L. Palacios, Richard C. Zimmerman

OES Faculty Publications

Projected increases in dissolved aqueous concentrations of carbon dioxide [CO_2(aq)] may have significant impacts on photosynthesis Of CO₂-limited organisms such as seagrasses. Short-term CO_2(aq) enrichment increases photosynthetic rates and reduces light requirements for growth and survival of individual eelgrass Zostera marina L. shoots growing in the laboratory under artificial light regimes for at least 45 d. This study examined the effects of long-term CO_2(aq) enrichment on the performance of eelgrass growing under natural light-replete (33% surface irradiance) and light-limited (5% surface irradiance) conditions for a period of 1 yr. Eelgrass shoots were grown at …

Stormwater Influence On Phytoplankton Composition And Dynamics In Lake Joyce, Virginia, Lewis F. Affronti Jr., B. Thomas Duquette

Virginia Journal of Science

A three year study of Lake Joyce, Virginia revealed relationships between the timing, duration, and amount of stormwater runoff and phytoplankton abundance and composition. Major phytoplankton taxa were identified and cyanophytes dominanted during periods of decreased rainwater input and increased lake water retention times. Increased freshwater input was associated with the growth of a diverse assemblage of both chlorophytes and diatoms. Phytoplankton dynamics as a result of significant rain events (i.e., hurricanes Floyd and Irene, 1999) were documented and specific taxa involved in nuisance algal blooms were identified.

Biogeochemical Consequences Of Rapid Microbial Turnover And Seasonal Succession In Soil, S. K. Schmidt, E. K. Costello, D. R. Nemergut, Cory C. Cleveland, S. C. Reed, M. N. Weintraub, A. F. Meyer, A. M. Martin

Ecosystem and Conservation Sciences Faculty Publications

Soil microbial communities have the metabolic and genetic capability to adapt to changing environmental conditions on very short time scales. In this paper we combine biogeochemical and molecular approaches to reveal this potential, showing that microbial biomass can turn over on time scales of days to months in soil, resulting in a succession of microbial communities over the course of a year. This new understanding of the year-round turnover and succession of microbial communities allows us for the first time to propose a temporally explicit N cycle that provides mechanistic hypotheses to explain both the loss and retention of dissolved …

Controls Over Foliar N:P Ratios In Tropical Rain Forests, Alan R. Townsend, Cory C. Cleveland, Gregory P. Asner, Mercedes M. C. Bustamante

Ecosystem and Conservation Sciences Faculty Publications

Correlations between foliar nutrient concentrations and soil nutrient availability have been found in multiple ecosystems. These relationships have led to the use of foliar nutrients as an index of nutrient status and to the prediction of broadscale patterns in ecosystem processes. More recently, a growing interest in ecological stoichiometry has fueled multiple analyses of foliar nitrogen : phosphorus (N:P) ratios within and across ecosystems. These studies have observed that N:P values are generally elevated in tropical forests when compared to higher latitude ecosystems, adding weight to a common belief that tropical forests are generally N rich and P poor. However, …

Current Status And Long-Term Trends In Water Quality And Living Resources In The Virginia Tributaries And Chesapeake Bay Mainstem From 1985 Through 2005, Daniel M. Dauer, Harold G. Marshall, John R. Donat, Michael F. Lane, Suzanne C. Doughten, Frederick A. Hoffman

Status and Trends for Virginia Chesapeake Bay

A marked decline in the water quality of the Chesapeake Bay has occurred over the past several decades. The disappearance of submerged aquatic vegetation in certain regions of the Bay, declines in the abundance of some commercially and recreationally important species, increases in the incidence of low dissolved oxygen events, changes in the Bay's food web, and other ecological problems have been related to the deteriorating water quality. The results of concentrated research efforts in the late 1970s and early 1980s stimulated the establishment of Federal and state directives to better manage the Chesapeake Bay watershed. By way of the …

Chumming On The Chesapeake Bay And Complexity Theory: Why The Precautionary Principle, Not Cost-Benefit Analysis, Makes More Sense As A Regulatory Approach, Hope M. Babcock

Georgetown Law Faculty Publications and Other Works

Estuaries like the Chesapeake Bay ("Bay") and Puget Sound are in grave trouble. They each suffer from poor water quality, loss of habitat, and declining biodiversity, and efforts to restore their health are straining both public and private resources. While accomplishments are often recorded in the fight against these ills, it is clear these accomplishments "are not yet equal to the scale of the problems." The focus of this article is on the nation's largest estuary, the Bay. Despite the investment of billions of dollars to improve water quality, the Bay continues to suffer from severe environmental degradation that impairs …

Grotius, Ocean Fish Ranching, And The Public Trust Doctrine: Ride 'Em Charlie Tuna, Hope M. Babcock

Georgetown Law Faculty Publications and Other Works

Seventy percent of the world's fish populations are in serious decline; some have been fished to near extinction. While domestic and international efforts are underway to curb the rate at which the remaining fish are being depleted, the demand for fish appears to be outstripping these initiatives--before they can take hold, the fish may be gone. In response to this increasingly dire situation, many countries, including the United States, have turned to fish farming in hope of taking pressure off of certain wild stocks of fish while still meeting consumer demands for them. More recently, non-U.S. fish farmers have moved …

Administering The Clean Water Act: Do Regulators Have "Bigger Fish To Fry" When It Comes To Addressing The Practice Of Chumming On The Chesapeake Bay?, Hope M. Babcock

Georgetown Law Faculty Publications and Other Works

The Chesapeake Bay is one of the country's most productive estuaries. However, for decades the health of the Bay has been declining due in large part to nutrification. Excessive nutrients encourage algal blooms, which lower dissolved oxygen and increase turbidity in the Bay's waters. More than 40% of the Bay's main stern is now dead largely as a result of this problem. The practice of chumming, the discarding of baitfish, usually menhaden, over the sides of fishing boats to attract game fish like striped bass, is contributing to the Bay's nutrification problem because the decomposing chum raises the waters biological …

Plant Assemblage Structure On Barrier Island ‘Pimple’ Dunes At The Virginia Coast Reserve Long-Term Ecological Research Site, Brett A. Mcmillan

Biological Sciences Theses & Dissertations

The habitats at the VCR LTER that were the focus of the current study are the Hog Island and Parramore Island 'pimples', small, rounded dunes forming along main dune ridges of the barrier islands. There are distinct plant assemblage zones found on pimples, although most of these dunes are 10–20 m in diameter. Hypotheses of the study were that fresh water availability was a main determinant of differences between assemblages and that pimple size and location would influence diversity and assemblage structure. Research goals were (1) to describe the plant assemblages on pimples, (2) to relate edaphic and geomorphological factors …

Phytoplankton Productivity In The Tidal Regions Of Four Chesapeake Bay (U.S.A.) Tributaries, Kneeland K. Nesius, Harold G. Marshall, Todd A. Egerton

Virginia Journal of Science

Monthly and annual phytoplankton productivity rates of four Virginia tidal rivers were determined based on a 12-year monitoring study that included sampling stations from tidal freshwater, oligohaline, and mesohaline regions in these rivers. The mean monthly rates and range at these locations were 5.52 (Dec.) to 175.12 (Aug.) mg C m^-3 h^-1 for tidal freshwater, 12.21 (Jan.) to 149.90 (May) mg C m^-3 h^-1 in oligohaline regions, and 16.20 (Jan.) to 151.33 (May) mg C m^-3 h^-1 for the mesohaline. The estimated mean annual 12 year productivity for the different Virginia river sites in …

Possible Use Of Foresight, Understanding, And Planning By Wolves Hunting Muskoxen, L. David Mech

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

On Ellesmere Island in 2006, arctic wolves (Canis lupus arctos) were observed making a two-pronged approach to a herd of muskoxen (Ovibos moschatus) and, on another occasion, ambushing muskoxen. Both observations seemed to provide evidence that the wolves were using foresight, understanding, and planning. Although the possible use of insight and purposiveness has been documented in captive wolves, the present report is one of the few to document the possibility that freeranging wolves use these other three mental processes.

En 2006, sur l’île Ellesmere, des loups arctiques (Canis lupus arctos) ont été observés en …

Annual Arctic Wolf Pack Size Related To Arctic Hare Numbers, L. David Mech

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

During the summers of 2000 through 2006, I counted arctic wolf (Canis lupus arctos) pups and adults in a pack, arctic hares (Lepus arcticus) along a 9 km index route in the area, and muskoxen (Ovibos moschatus) in a 250 km² part of the area near Eureka (80° N, 86° W), Ellesmere Island, Nunavut, Canada. Adult wolf numbers did not correlate with muskox numbers, but they were positively related (r² = 0.89; p < 0.01) to an arctic hare index. This is the first report relating wolf numbers to non-ungulate prey.

Pendant les étés 2000 à 2006, j’ai compté les jeunes loups arctiques et les adultes (Canis lupus arctos …

Termite Resource Partitioning Related To Log Diameter, Deborah A. Waller

Biological Sciences Faculty Publications

The termites Reticuliterines virginicus and R. flavipes are sympatric in forests along the eastern United States from Florida to Maryland. These congeners construct subterranean nests, forage on surface and buried wood, and appear to have very similar ecological requirements. In the present study, I examined host-wood selection by these species in a coastal forest over two years. Logs inhabited by R. virginicus had significantly greater diameters than those used by R. flavipes. It is not known whether this pattern resulted from species-specific differences in preference for host size or competition for preferred logs. Host-wood temperature did not differ for …