Ecology and Evolutionary Biology Commons^™

Nest Destruction Elicits Indiscriminate Con- Versus Heterospecific Brood Parasitism In A Captive Bird, Rachel C. Shaw, William E. Feeney, Mark E. Hauber

Publications and Research

Following nest destruction, the laying of physiologically committed eggs (eggs that are ovulated, yolked, and making their way through the oviduct) in the nests of other birds is considered a viable pathway for the evolution of obligate interspecific brood parasitism. While intraspecific brood parasitism in response to nest predation has been experimentally demonstrated, this pathway has yet to be evaluated in an interspecific context. We studied patterns of egg laying following experimental nest destruction in captive zebra finches, Taeniopygia guttata, a frequent intraspecific brood parasite. We found that zebra finches laid physiologically committed eggs indiscriminately between nests containing conspecific eggs …

Project Safe Flight: Making New York Safe For Migratory Birds, Kaitlyn L. Parkins, Susan B. Elbin Ph.D., Adriana Palmer, Darren Klein, Elle Barnes

Publications and Research

More than 100 species of migratory birds pass through New York City during spring and fall migrations. Located at the nexus of several migratory routes, New York City’s tall buildings and reflective glass pose a serious threat to over 100 species of migratory birds. Since 1997, NYC Audubon has led Project Safe Flight (PSF), a volunteer-based citizen-science project, with the goal of monitoring and mitigating bird collisions. We examined 16 years of PSF data, during which volunteers collected over 6,000 birds of 126 different species. The top two species, White-throated Sparrow and Common Yellowthroat, make up 23% of all collisions. …

Are Characiform Fishes Gondwanan In Origin? Insights From A Time-Scaled Molecular Phylogeny Of The Citharinoidei (Ostariophysi: Characiformes), Jairo Arroyave, John S. S. Denton, Melanie L. J. Stiassny

Publications and Research

Fishes of the order Characiformes are a diverse and economically important teleost clade whose extant members are found exclusively in African and Neotropical freshwaters. Although their transatlantic distribution has been primarily attributed to the Early Cretaceous fragmentation of western Gondwana, vicariance has not been tested with temporal information beyond that contained in their fragmentary fossil record and a recent time-scaled phylogeny focused on the African family Alestidae. Because members of the suborder Citharinoidei constitute the sister lineage to the entire remaining Afro-Neotropical characiform radiation, we inferred a time-calibrated molecular phylogeny of citharinoids using a popular Bayesian approach to molecular dating …

Signatures Of Rapid Evolution In Urban And Rural Transcriptomes Of White-Footed Mice (Peromyscus Leucopus) In The New York Metropolitan Area, Stephen Edward Harris, Jason Munshi-South, Craig Oberfell, Rachel O'Neill

Publications and Research

Urbanization is a major cause of ecological degradation around the world, and human settlement in large cities is accelerating. New York City (NYC) is one of the oldest and most urbanized cities in North America, but still maintains 20% vegetation cover and substantial populations of some native wildlife. The white-footed mouse, Peromyscus leucopus, is a common resident of NYC’s forest fragments and an emerging model system for examining the evolutionary consequences of urbanization. In this study, we developed transcriptomic resources for urban P. leucopus to examine evolutionary changes in protein-coding regions for an exemplar “urban adapter.” We used Roche 454 …

Taxonomic Revision Of The Olingos (Bassaricyon), With Description Of A New Species, The Olinguito, Kristofer M. Helgen, C. Miguel Pinto, Roland Kays, Laura E. Helgen, Mirian T. N. Tsuchiya, Aleta Quinn, Don E. Wilson, Jesús E. Maldonado

Publications and Research

We present the first comprehensive taxonomic revision and review the biology of the olingos, the endemic Neotropical procyonid genus Bassaricyon, based on most specimens available in museums, and with data derived from anatomy, morphometrics, mitochondrial and nuclear DNA, field observations, and geographic range modeling. Species of Bassaricyon are primarily forest-living, arboreal, nocturnal, frugivorous, and solitary, and have one young at a time. We demonstrate that four olingo species can be recognized, including a Central American species (B. gabbii), lowland species with eastern, cis-Andean (B. alleni) and western, trans- Andean (B. medius) distributions, and a species endemic to cloud forests in …

Evolution And Allometry Of Calcaneal Elongation In Living And Extinct Primates, Doug M. Boyer, Erik R. Seiffert, Justin T. Gladman, Jonathan I. Bloch

Publications and Research

Specialized acrobatic leaping has been recognized as a key adaptive trait tied to the origin and subsequent radiation of euprimates based on its observed frequency in extant primates and inferred frequency in extinct early euprimates. Hypothesized skeletal correlates include elongated tarsal elements, which would be expected to aid leaping by allowing for increased rates and durations of propulsive acceleration at takeoff. Alternatively, authors of a recent study argued that pronounced distal calcaneal elongation of euprimates (compared to other mammalian taxa) was related primarily to specialized pedal grasping. Testing for correlations between calcaneal elongation and leaping versus grasping is complicated by …

Habitat And Host Indicate Lineage Identity In Colletotrichum Gloeosporioides S.L. From Wild And Agricultural Landscapes In North America, Vinson P. Doyle, Peter V. Oudemans, Stephen A. Rehner, Amy Litt

Publications and Research

Understanding the factors that drive the evolution of pathogenic fungi is central to revealing the mechanisms of virulence and host preference, as well as developing effective disease control measures. Prerequisite to these pursuits is the accurate delimitation of species boundaries. Colletotrichum gloeosporioides s.l. is a species complex of plant pathogens and endophytic fungi for which reliable species recognition has only recently become possible through a multi-locus phylogenetic approach. By adopting an intensive regional sampling strategy encompassing multiple hosts within and beyond agricultural zones associated with cranberry (Vaccinium macrocarpon Aiton), we have integrated North America strains of Colletotrichum gloeosporioides s.l. from …

A Phylogeny And Revised Classification Of Squamata, Including 4161 Species Of Lizards And Snakes, R. Alexander Pyron, Frank T. Burbrink, John J. Wiens

Publications and Research

Background: The extant squamates (>9400 known species of lizards and snakes) are one of the most diverse and conspicuous radiations of terrestrial vertebrates, but no studies have attempted to reconstruct a phylogeny for the group with large-scale taxon sampling. Such an estimate is invaluable for comparative evolutionary studies, and to address their classification. Here, we present the first large-scale phylogenetic estimate for Squamata.

Results: The estimated phylogeny contains 4161 species, representing all currently recognized families and subfamilies. The analysis is based on up to 12896 base pairs of sequence data per species (average = 2497 bp) from 12 genes, …

Landscape Genetics Of Leaf-Toed Geckos In The Tropical Dry Forest Of Northern Mexico, Christopher Blair, Victor H. Jimenez-Arcos, Fausto R. Mendez De La Cruz, Robert W. Murphy

Publications and Research

Habitat fragmentation due to both natural and anthropogenic forces continues to threaten the evolution and maintenance of biological diversity. This is of particular concern in tropical regions that are experiencing elevated rates of habitat loss. Although less well-studied than tropical rain forests, tropical dry forests (TDF) contain an enormous diversity of species and continue to be threatened by anthropogenic activities including grazing and agriculture. However, little is known about the processes that shape genetic connectivity in species inhabiting TDF ecosystems. We adopt a landscape genetic approach to understanding functional connectivity for leaf-toed geckos (Phyllodactylus tuberculosus) at multiple sites …

Assessing Regional And Interspecific Variation In Threshold Responses Of Forest Breeding Birds Through Broad Scale Analyses, Yntze Van Der Hoek, Rosalind Renfrew, Lisa L. Manne

Publications and Research

Background: Identifying persistence and extinction thresholds in species-habitat relationships is a major focal point of ecological research and conservation. However, one major concern regarding the incorporation of threshold analyses in conservation is the lack of knowledge on the generality and transferability of results across species and regions. We present a multi-region, multi-species approach of modeling threshold responses, which we use to investigate whether threshold effects are similar across species and regions.

Methodology/Principal Findings: We modeled local persistence and extinction dynamics of 25 forest-associated breeding birds based on detection/non-detection data, which were derived from repeated breeding bird atlases for the state …

Allometric Scaling And Resource Limitations Model Of Tree Heights: Part 1. Model Optimization And Testing Over Continental Usa, Yuli Shi, Sungho Choi, Xiliang Ni, Sangram Ganguly, Gong Zhang, Hieu V. Duong, Michael A. Lefsky, Marc Simard, Sassan S. Saatchi, Shihyan Lee, Wenge Ni-Meister, Shilong Piao, Chunxiang Cao, Ramakrishna R. Nemani, Ranga B. Myneni

Publications and Research

A methodology to generate spatially continuous fields of tree heights with an optimized Allometric Scaling and Resource Limitations (ASRL) model is reported in this first of a multi-part series of articles. Model optimization is performed with the Geoscience Laser Altimeter System (GLAS) waveform data. This methodology is demonstrated by mapping tree heights over forested lands in the continental USA (CONUS) at 1 km spatial resolution. The study area is divided into 841 eco-climatic zones based on three forest types, annual total precipitation classes (30 mm intervals) and annual average temperature classes (2 °C intervals). Three model parameters (area of single …

What To Eat Now? Shifts In Polar Bear Diet During The Ice-Free Season In Western Hudson Bay, Linda J. Gormezano, Robert F. Rockwell

Publications and Research

Under current climate trends, spring ice breakup in Hudson Bay is advancing rapidly, leaving polar bears (Ursus maritimus) less time to hunt seals during the spring when they accumulate the majority of their annual fat reserves. For this reason, foods that polar bears consume during the ice-free season may become increasingly important in alleviating nutritional stress from lost seal hunting opportunities. Defining how the terrestrial diet might have changed since the onset of rapid climate change is an important step in understanding how polar bears may be reacting to climate change. We characterized the current terrestrial diet of polar bears …

The Determinants Of Helminth Infection In Baboons, Rita Monfort

Publications and Research

THE DETERMINANTS OF HELMINTH INFECTION IN BABOONS

Summary Paragraph:

Intestinal parasitic helminths are common in wild primate populations [1, 2] and can impose a significant burden on their host’s fitness. Numerous factors can affect the prevalence and diversity of intestinal parasites in natural populations including environmental factors [3, 4], the host’s behavior and genetics [5, 6]. How these different factors interact in natural populations remains unclear. This is in all probability due to the fact that previous studies have seldom looked at the prevalence and diversity of parasitic helminths in the same species but in different habitats over periods longer …

What Is The Predictive Power Of The Colobine Protein-To-Fiber Model And Its Conservation Value?, Jan F. Gogarten, Melissa Guzman, Colin A. Chapman, Aerin L. Jacob, Patrick A. Omeja, Jessica Rothman

Publications and Research

Predicting variation in animal abundance across time and space has proven very difficult; however, a model exists to predict the biomass of small folivorous primates that has considerable correlative support. This model suggests that the protein-to-fiber ratio of leaves in a habitat can predict folivore biomass. Here we present an experimental test of this protein-to-fiber model to assess if the number of infant monkeys per female and group size can be predicted based on the leaf chemistry of a habitat. We expected regenerating forest in Kibale National Park, Uganda to have leaves with higher concentrations of crude protein and lower …

Squalicorax Chips A Tooth: A Consequence Of Feeding-Related Behavior From The Lowermost Navesink Formation (Late Cretaceous: Campanian-Maastrichtian) Of Monmouth County, New Jersey, Usa, Martin A. Becker, John A. Chamberlain Jr.

Publications and Research

Chipped and broken functional teeth are common in modern sharks with serrated tooth shape. Tooth damage consists of splintering, cracking, and flaking near the cusp apex where the enameloid is broken and exposes the osteodentine and orthodentine. Such damage is generally viewed as the result of forces applied during feeding as the cusp apex impacts the skeletal anatomy of prey. Damage seen in serrated functional teeth from sharks Squalicorax kaupi [1] and Squalicorax pristodontus [1] from the late Cretaceous lowermost Navesink Formation of New Jersey resembles that occurring in modern sharks and suggests similar feeding behavior. Tumbling experiments using serrated …

Pre-Whaling Genetic Diversity And Population Ecology In Eastern Pacific Gray Whales: Insights From Ancient Dna And Stable Isotopes, S Elizabeth Alter, Seth D. Newsome, Stephen R. Palumbi

Publications and Research

Commercial whaling decimated many whale populations, including the eastern Pacific gray whale, but little is known about how population dynamics or ecology differed prior to these removals. Of particular interest is the possibility of a large population decline prior to whaling, as such a decline could explain the ,5-fold difference between genetic estimates of prior abundance and estimates based on historical records. We analyzed genetic (mitochondrial control region) and isotopic information from modern and prehistoric gray whales using serial coalescent simulations and Bayesian skyline analyses to test for a pre-whaling decline and to examine prehistoric genetic diversity, population dynamics and …

Genetic Signatures Of A Demographic Collapse In A Large-Bodied Forest Dwelling Primate (Mandrillus Leucophaeus), Nelson Ting, Christos Astaras, Gail Hearn, Shaya Honarvar, Joel Corush, Andrew S. Burrell, Naomi Phillips, Bethan J. Morgan, Elizabeth L. Gadsby, Ryan L. Raaum, Christian Roos

Publications and Research

It is difficult to predict how current climate change will affect wildlife species adapted to a tropical rainforest environment. Understanding how population dynamics fluctuated in such species throughout periods of past climatic change can provide insight into this issue. The drill (Mandrillus leucophaeus) is a large-bodied rainforest adapted mammal found in West Central Africa. In the middle of this endangered monkey’s geographic range is Lake Barombi Mbo, which has a well-documented palynological record of environmental change that dates to the Late Pleistocene. We used a Bayesian coalescent-based framework to analyze 2,076 base pairs of mitochondrial DNA across wild drill populations …

Notes On The Diet Of The Malay Civet (Viverra Tangalunga) And Other Civets In Logged And Unlogged Lowland Dipterocarp Rain Forests In Sabah, Borneo, Christina P. Colon, John B. Sugau

Publications and Research

Civet diets were examined in a logged and unlogged Bornean rain forest. Malay civets (Viverra tangalunga) consumed invertebrates, fruit, rodents, insectivores, birds, snakes and lizards, and appear to show preference for centipedes and scorpions. Other civet species consumed fruit, such as figs, Connarus sp. and Annona sp., particularly in the unlogged forest, but also consumed invertebrates and vertebrates. Reduced fruit consumption observed in the logged forest may be due to lower availability and may be offset by increased consumption of invertebrates. The increased overlap in diet between Malay civets and other civets in disturbed areas may lead to …

Tyrannobdella Rex N. Gen. N. Sp. And The Evolutionary Origins Of Mucosal Leech Infestations, Anna J. Phillips, Renzo Arauco-Brown, Alejandro Oceguera-Figueroa, Gloria P. Gomez, María Beltrán, Yi-Te Lai, Mark E. Siddall

Publications and Research

Background: Leeches have gained a fearsome reputation by feeding externally on blood, often from human hosts. Orificial hirudiniasis is a condition in which a leech enters a body orifice, most often the nasopharyngeal region, but there are many cases of leeches infesting the eyes, urethra, vagina, or rectum. Several leech species particularly in Africa and Asia are well known for their propensity to afflict humans. Because there has not previously been any data suggesting a close relationship for such geographically disparate species, this unnerving tendency to be invasive has been regarded only as a loathsome oddity and not a unifying …

Correlating Molecular Phylogeny With Venom Apparatus Occurrence In Panamic Auger Snails (Terebridae), Mandë Holford, Nicolas Puillandre, Maria Vittoria Modica, Maren Watkins, Rachel Collin, Eldredge Bermingham, Baldomero M. Olivera

Publications and Research

Central to the discovery of neuroactive compounds produced by predatory marine snails of the superfamily Conoidea (cone snails, terebrids, and turrids) is identifying those species with a venom apparatus. Previous analyses of western Pacific terebrid specimens has shown that some Terebridae groups have secondarily lost their venom apparatus. In order to efficiently characterize terebrid toxins, it is essential to devise a key for identifying which species have a venom apparatus. The findings presented here integrate molecular phylogeny and the evolution of character traits to infer the presence or absence of the venom apparatus in the Terebridae. Using a combined dataset …

Poly-Paraphyly Of Hirudinidae: Many Lineages Of Medicinal Leeches, Anna J. Phillips, Mark E. Siddall

Publications and Research

Background: Medicinal leeches became infamous for their utility in bloodletting popularized in the 19th century, and have seen a recent resurgence in post-operative treatments for flap and replantation surgeries, and in terms of characterization of salivary anticoagulants. Notorious throughout the world, the quintessential leech family Hirudinidae has been taken for granted to be monophyletic, as has the non-bloodfeeding family Haemopidae.

Results: This study is the first to evaluate molecular evidence from hirudinid and haemopid leeches in a manner that encompasses the global scope of their taxonomic distributions. We evaluated the presumed monophyly of the Hirudinidae and assessed previous well-accepted classification …

Researcher Finds New Fossils In Spain, Aldemaro Romero Jr.

Publications and Research

No abstract provided.

The Fourth Level Of Social Structure In A Multi-Level Society: Ecological & Social Functions Of Clans In Hamadryas Baboons, Amy Schreier, Larissa Swedell

Publications and Research

Hamadryas baboons are known for their complex, multi-level social structure consisting of troops, bands, and one-male units (OMUs) [Kummer, 1968]. Abegglen [1984] observed a 4^th level of social structure comprising several OMUs that rested near one another on sleeping cliffs, traveled most closely together during daily foraging, and sometimes traveled as subgroups independently from the rest of the band. Abegglen called these associations “clans” and suggested that they consisted of related males. Here we confirm the existence of clans in a second wild hamadryas population, a band of about 200 baboons at the Filoha site in lowland Ethiopia. During …

Male Aggression Towards Females In Hamadryas Baboons: Conditioning, Coercion And Control, Larissa Swedell, Amy Schreier

Publications and Research

No abstract provided.

Measuring Knowledge Of Natural Selection: A Comparison Of The C.I.N.S., An Open-Response Instrument, And An Oral Interview, Ross Nehm, Irvin Sam Schonfeld

Publications and Research

Growing recognition of the central importance of fostering an in-depth understanding of natural selection has, surprisingly, failed to stimulate work on the development and rigorous evaluation of instruments that measure knowledge of it. We used three different methodological tools, the Conceptual Inventory of Natural Selection (CINS), a modified version of Bishop and Anderson's (Bishop and Anderson [1990] Journal of Research in Science Teaching 27: 415-427) open-response test that we call the Open Response Instrument (ORI), and an oral interview derived from both instruments, to measure biology majors' understanding of and alternative conceptions about natural selection. We explored how these instruments …

Use Of Palm Trees As A Sleeping Site By Hamadryas Baboons In Ethiopia, Amy Schreier, Larissa Swedell

Publications and Research

Hamadryas baboons sleep on cliffs throughout their range, and this can be attributed to the safety cliffs provide against predators in the absence of tall trees. In this paper, we report the first documented occurrence of hamadryas baboons sleeping in doum palm trees rather than on cliffs. Data derive from a study of hamadryas baboons at the Filoha site in lowland Ethiopia. During all-day follows, data were collected on travel patterns, band activity, and location. Variation in the baboons’ home range was characterized using vegetation transects. We discovered that one band in this population, Band 3, occasionally slept in doum …

Composition And Seasonality Of Diet In Wild Hamadryas Baboons: Preliminary Findings From Filoha, Larissa Swedell, Getenet Hailemeskel, Amy Schreier

Publications and Research

Here we report the first year-round quantitative data on dietary composition and seasonality in wild hamadryas baboons. Study subjects were adult male members of Band 3 at the Filoha field site in central lowland Ethiopia. Data collection consisted of 10-minute focal samples during all-day follows 4-6 days per month over the course of one year. The two largest contributors to the diet were Hyphaene thebaica and Acacia senegal, and these were the only plant species found in the diet during every month of the year. Other relatively major contributors to the diet, such as Cyperus grandibulbosus, Seddera bagshawei, …

Does Increasing Biology Teacher Knowledge Of Evolution And The Nature Of Science Lead To Greater Advocacy For The Teaching Of Evolution In Schools?, Ross Nehm, Irvin Sam Schonfeld

Publications and Research

This study investigated whether or not an increase in secondary science teacher knowledge about evolution and the nature of science gained from completing a graduate-level evolution course was associated with greater preference for the teaching of evolution in schools. Forty-four precertified secondary biology teachers participated in a 14-week intervention designed to address documented misconceptions identified by a precourse instrument. The course produced statistically significant gains in teacher knowledge of evolution and the nature of science and a significant decrease in misconceptions about evolution and natural selection. Nevertheless, teachers' postcourse preference positions remained unchanged; the majority of science teachers still preferred …

Strategies Of Sex And Survival In Hamadryas Baboons: Through A Female Lens, Larissa Swedell

Publications and Research

No abstract provided.

Researchers Discover Fossil Of Beaver-Like Animal In China, Aldemaro Romero Jr., Shelly D. Kannada

Publications and Research

No abstract provided.