Ecology and Evolutionary Biology Commons^™

Refining Methods For Quantifying Macroinvertebrate Estimates Of Preference For Use In Stream Bioassessments, Ellen F. Wakeley Tomlinson

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Two-thirds of United States stream length is in either fair or poor biological condition. However, we do not yet have reliable, quantitative tools to diagnose site-specific causes of biological impairment. One way to diagnose causes of impairment is to compare the environmental tolerances or preferences of the taxa expected at a site to those of the observed community. Stream ecologists have derived tolerance values (TVs) from field data for use in causal analysis, but inconsistencies across studies cast doubt on the accuracy of these TVs. Published TVs may not agree with one another for several reasons, including: differences in the …

Hydra Effects In Stable Communities And Their Implications For System Dynamics, Michael H. Cortez, Peter A. Abrams

Mathematics and Statistics Faculty Publications

A hydra effect occurs when the mean density of a species increases in response to greater mortality. We show that, in a stable multispecies system, a species exhibits a hydra effect only if maintaining that species at its equilibrium density destabilizes the system. The stability of the original system is due to the responses of the hydra-effect species to changes in the other species’ densities. If that dynamical feedback is removed by fixing the density of the hydra-effect species, large changes in the community make-up (including the possibility of species extinction) can occur. This general result has several implications: (1) …

“One Health” Or Three? Publication Silos Among The One Health Disciplines, Kezia R. Manlove, Josephine G. Walker, Meggan E. Craft, Kathryn P. Huyvaert, Maxwell B. Joseph, Ryan S. Miller, Pauline Nol, Kelly A. Patyk, Daniel O'Brien, Daniel P. Walsh, Paul C. Cross

Wildland Resources Faculty Publications

The One Health initiative is a global effort fostering interdisciplinary collaborations to address challenges in human, animal, and environmental health. While One Health has received considerable press, its benefits remain unclear because its effects have not been quantitatively described. We systematically surveyed the published literature and used social network analysis to measure interdisciplinarity in One Health studies constructing dynamic pathogen transmission models. The number of publications fulfilling our search criteria increased by 14.6% per year, which is faster than growth rates for life sciences as a whole and for most biology subdisciplines. Surveyed publications clustered into three communities: one used …

Gibsonville Healthy Forest Restoration Project: Silviculture Report, Dan Roskopf

Aspen Bibliography

The Forest Service proposes to reduce the risk of wildfire, to protect, restore, and enhance forest ecosystem components (i.e., streams, meadows, aspen areas) in the vicinity of Gibsonville, California. A combination of hazard tree removal, forest health, and fuels reduction treatments are proposed on 1,200 acres of Forest Service system lands. These actions are proposed to be implemented on the Feather River Ranger District of the Plumas National Forest.

Bigtooth And Quaking Aspen Propagation From Roots Versus Seed, Joseph M. Vande Hey

Aspen Bibliography

No abstract provided.

High And Dry: Post-Fire Tree Seedlingestablishment In Subalpine Forestsdecreases With Post-Fire Drought Andlarge Stand-Replacing Burn Patches, Brian J. Harvey, Daniel C. Donato, Monica G. Turner

Aspen Bibliography

Aim: Climate warming and increased wildfire activity are hypothesized to catalyse biogeographical shifts, reducing the resilience of fire-prone forests world-wide. Two key mechanisms underpinning hypotheses are: (1) reduced seed availability in large stand-replacing burn patches, and (2) reduced seedling establishment/survival after post-fire drought. We tested for regional evidence consistent with these mechanisms in an extensive fire-prone forest biome by assessing post-fire tree seedling establishment, a key indicator of forest resilience.

Location: Subalpine forests, US Rocky Mountains.

Methods: We analysed post-fire tree seedling establishment from 184 field plots where stand-replacing forest fires were followed by varying post-fire climate conditions. Generalized linear …

Using Plant-Soil Feedbacks To Predict Plant Biomass In Diverse Communities, Andrew Kulmatiski, Karen H. Beard, Josephine Grenzer, Leslie E. Forero, Justin Heavilin

Wildland Resources Faculty Publications

It has become clear that plants can create soils that affect subsequent plant growth. However, because plant-soil feedbacks (PSFs) are typically measured in monoculture experiments, it remains unclear to what extent PSFs affect plant growth in communities. Here we used data from a factorial PSF experiment to predict the biomass of 12 species grown in 162 plant community combinations. Five different plant growth models were parameterized with either monoculture biomass data (Null) or with PSF data (PSF) and model predictions were compared to plant growth observed in communities. For each of the five models, PSF model predictions were closer to …

Comparing Process-Based And Constraint-Based Approaches For Modeling Macroecological Patterns, Xiao Xiao

Biology Faculty Publications

Ecological patterns arise from the interplay of many different processes, and yet the emergence of consistent phenomena across a diverse range of ecological systems suggests that many patterns may in part be determined by statistical or numerical constraints. Differentiating the extent to which patterns in a given system are determined statistically, and where it requires explicit ecological processes, has been difficult. We tackled this challenge by directly comparing models from a constraint-based theory, the Maximum Entropy Theory of Ecology (METE) and models from a process-based theory, the size-structured neutral theory (SSNT). Models from both theories were capable of characterizing the …

The Importance Of Motivation, Weapons, And Foul Odors In Driving Encounter Competition In Carnivores, Maximilian L. Allen, Christopher C. Wilmers, L. Mark Elbroch, Julie M. Golla, Heiko U. Wittmer

Environment and Society Faculty Publications

Encounter competition is interference competition in which animals directly contend for resources. Ecological theory predicts the trait that determines the resource holding potential (RHP), and hence the winner of encounter competition, is most often body size or mass. The difficulties of observing encounter competition in complex organisms in natural environments, however, has limited opportunities to test this theory across diverse species. We studied the outcome of encounter competition contests among mesocarnivores at deer carcasses in California to determine the most important variables for winning these contests. We found some support for current theory in that body mass is important in …

Multi-Scale Environmental Filters And Niche Partitioning Govern The Distributions Of Riparian Vegetation Guilds, Nate Hough-Snee, Brian G. Laub, David M. Merritt, Arin Lexine Long, Lloyd L. Nackley, Brett B. Roper, Joseph Michael Wheaton

Watershed Sciences Faculty Publications

Across landscapes, riparian plant communities assemble under varying levels of disturbance, environmental stress, and resource availability, leading to the development of distinct riparian life-history guilds over evolutionary timescales. Identifying the environmental filters that exert selective pressures on specific riparian vegetation guilds is a critical step in setting baseline expectations for how riparian vegetation may respond to environmental conditions anticipated under future global change scenarios. In this study, we ask: (1) What riparian plant guilds exist across the interior Columbia and upper Missouri River basins? (2) What environmental filters shape riparian guild distributions? (3) How does resource partitioning among guilds influence …

Structural And Compositional Patterns In Forest Communities In The Intermountain West Across Multiple Scales, Marcella A. Windmuller-Campione

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The United States Department of Agriculture (USDA) strives to use science-based research to both protect and enhance the management of natural resources. From this overarching goal, the USDA has a specific objective to protect the health and sustainability of forest and rangeland ecosystems. Based on this specific objective, an Advisory Board of natural resource scientists within the Quinney College of Natural Resources (QCNR) was awarded a National Institute of Food and Agricultural (NIFA) grant to train two PhD and two MS students. Their research would focus on managing for resilient forest ecosystem in the Intermountain West.

With input from the …

Ecology, Behavior And Taxonomy Of Anurans From Brazil's Atlantic Forest, Rodrigio Barbosa Ferreira

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Anura is a diverse group with more than 7382 species described, which represents 88% of the species belonging to the Class Amphibia. Anurans are among the first organisms to be affected by environmental stressors, so when they show decline in the wild, it is a warning to other species, including humans. It is alarming that one-third of the world’s anurans are facing extinction. Following the same trend, a substantive portion of the 988 recognized species of the Atlantic Forest have suffered population declines and local extinctions, attributed primarily to habitat changes.

Despite the unique life history characteristics that make amphibians …

Matching Watershed And Otolith Chemistry To Establish Natal Origin Of An Endangered Desert Lake Sucker, Deanna Strohm

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Like many native endemic desert freshwater fish species, the June Sucker (Chasmistes liorus) is currently listed as endangered. Managers have increasingly turned to habitat restoration as a key component to recovery plans. For endangered species, one of the primary outcomes of habitat restoration is that it should result in successful reproduction and recruitment of individuals into the adult population. Confirmation of natural recruitment as a function of habitat restoration can only be achieved by establishing natal origins.

Recent research has proven the validity of otolith microchemistry, a technique that analyzes small quantities of elements, to trace potamodromous fish …

Beneficial Effects Of Temperate Forage Legumes That Contain Condensed Tannins, Jennifer W. Macadam, Juan J. Villalba

Wildland Resources Faculty Publications

The two temperate forage legumes containing condensed tannins (CT) that promote ruminant production are birdsfoot trefoil (Lotus corniculatus L.; BFT) and sainfoin (Onobrychis viciifolia Scop.; SF). Both are well-adapted to the cool-temperate climate and alkaline soils of the Mountain West USA. Condensed tannins comprise a diverse family of bioactive chemicals with multiple beneficial functions for ruminants, including suppression of internal parasites and enteric methane. Birdsfoot trefoil contains 10 to 40 g·CT·kg−1 dry matter (DM), while SF contains 30 to 80 g·CT·kg−1 DM. Our studies have focused on these two plant species and have demonstrated consistently elevated rates of gain for …

Interdisciplinary Modeling For Water-Related Issues Graduate Course, Laurel Saito, Alexander Fernald, Timothy Link

All ECSTATIC Materials

The science and management of aquatic ecosystems is inherently interdisciplinary, with issues associated with hydrology, atmospheric science, water quality, geochemistry, sociology, economics, environmental science, and ecology. Addressing water resources issues in any one discipline invariably involves effects that concern other disciplines, and attempts to address one issue often have consequences that exacerbate existing issues or concerns, or create new ones (Jørgensen et al. 1992; Lackey et al. 1975; Straskraba 1994) due to the strongly interactive nature of key processes (Christensen et al. 1996). Thus, research and management of aquatic ecosystems must be interdisciplinary to be most effective, but such truly …

The Role Of Fire In Aspen Ecology And Restoration, Douglas J. Shinneman, Kevin D. Krasnow, Susan K. Mcilroy

Aspen Bibliography

Quaking aspen is generally considered to be a fire-adapted species because it regenerates prolifically after fire, and it can be replaced by more shade-tolerant tree species in the absence of fire. As early-successional aspen stands transition to greater conifer-dominance, they become increasingly fire prone, until fire returns, and aspen again temporarily dominate. While this disturbance-succession cycle is critical to the persistence of aspen on many landscapes, some aspen stands persist on the landscape without fire. The complex role of fire is an important consideration for developing conservation and restoration strategies intended to sustain aspen.

Variation In Trembling Aspen And White Spruce Wood Quality Grown In Mixed And Single Species Stands In The Boreal Mixedwood Forest, Francis De Araujo, James F. Hart, Shawn D. Mansfield

Aspen Bibliography

The Canadian boreal forest is largely represented by mixed wood forests of white spruce (Picea glauca (Moench) Voss) and trembling aspen (Populus tremuloides Michx). In this study, a total of 300 trees originating from three sites composed of trembling aspen and white spruce with varying compositions were investigated for wood quality traits: one site was composed mainly of aspen, one mainly of spruce and a third was a mixed site. Four wood quality traits were examined: wood density, microfibril angle (MFA), fibre characteristics, and cell wall chemistry. Social classes were also determined for each site in an attempt …

Quantifying Non-Game Fish Sampling Biases And Demographics To Better Understand The Role Of Fish In Pelican Diet And Distribution At Strawberry Reservoir, Ut, Jamie Reynolds

Undergraduate Honors Capstone Projects

Predation and competition are natural ecological processes, though these interactions occasionally cause concern among humans when ecosystem services are involved (e.g., popular fisheries in highly managed systems). The population of American white pelican (Pelecanus erythrorhynchos) at Strawberry Reservoir (Utah) has increased dramatically in the last decade, as have the populations of Utah sucker (Catostomus ardens) and Utah chub (Gila atraria). Anglers and managers are concerned that predation by pelicans and competition from non-game fish species are negatively impacting the reservoir's prized Bonneville cutthroat trout (Oncorhynchus clarkii utah) fishery. My project focused on …

Greater Sage-Grouse Seasonal Habitat Models, Response To Juniper Reduction And Effects Of Capture Behavior On Vital Rates, In Northwest Utah, Avery Cook

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The greater sage-grouse (Centrocercus urophasianus; sage-grouse) is a species of conservation concern in Utah and across their range throughout the western US and southern Canada. Sage-grouse decline is primarily a result of declines in sagebrush habitat on which sage-grouse depend for winter, summer, nesting, and brood habitat. Detailed site-specific knowledge of sage-grouse ecology and distribution in needed to effectively conserve the species. To expand knowledge of local populations within the West Box Elder Sage Grouse Management Area (SGMA) in NW Utah and gain insights into the effectiveness of vegetation treatments intended to benefit sage-grouse, I radio marked and …

Grass-Shrub Spatial Associations Over Precipitation And Grazing Gradients In The Great Basin, Usa, Maike F. Holthuijzen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

As environmental stress increases, positive plant interactions dominate, resulting in clumped, plant-plant spatial patterns. Positive plant-plant interactions have received more attention in recent years due to their importance to the structure and function of arid ecosystems. Certain plants (nurses), provide benefits that help neighboring plants grow or survive.

I investigated spatial associations between Wyoming big sagebrush (Artemisia tridentata ssp. wyomingensis) and three native grasses (Poa secunda, Elymus elymoides, and Pseudoroegnaria spicata) across a rainfall gradient in the Great Basin, USA. We also explored the effect of grazing on grass-shrub spatial patterns. I hypothesized that positive …

Factors Influencing The Ecology Of Greater Sage-Grouse Inhabiting The Bear Lake Plateau And Valley, Idaho And Utah, Casey J. Cardinal

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Greater sage-grouse (Centrocercus urophasianus; sage-grouse) are a sagebrush obligate species and as such an indicator of sagebrush (Artemisia spp.) habitat quality and quantity. Sage-grouse populations have declined across western North America. This decline has been attributed to habitat loss and degradation of the sagebrush ecosystem. To determine factors that may cause localized declines in sage-grouse populations, managers may need site-specific information on the ecology and habitat use patterns of meta-populations. This information is currently lacking for sage-grouse populations that inhabit the Bear Lake Plateau and Valley (BLPV), encompassing parts of Idaho, Utah and Wyoming. I captured, radio-marked …

Long-Term Plant Responses To Climate Are Moderated By Biophysical Attributes In A North American Desert, S M. Munson, R H. Webb, D C. Housman, Kari E. Veblen, K E. Nussear, E A. Beever, K B. Hartney, M N. Miriti, S L. Phillips, R E. Fulton, N G. Tallent

Wildland Resources Faculty Publications

Recent elevated temperatures and prolonged droughts in many already water-limited regions throughout the world, including the southwestern United States, are likely to intensify according to future climate-model projections. This warming and drying can negatively affect perennial vegetation and lead to the degradation of ecosystem properties. To better understand these detrimental effects, we formulate a conceptual model of dryland ecosystem vulnerability to climate change that integrates hypotheses on how plant species will respond to increases in temperature and drought, including how plant responses to climate are modified by landscape, soil and plant attributes that are integral to water availability and use. …

Building Resilience Into Quaking Aspen Management, Paul C. Rogers

Aspen Bibliography

Throughout the 20^th century, forest scientists and land managers were guided by principles of succession with regard to aspen forests. The historical model depicted aspen as a "pioneer species" that colonizes a site following disturbance and is eventually overtopped by conifers. Aspen systems are more diverse, however, than previously described. Not only are there distinctive seral and stable aspen, but variations within these types require appropriate management considerations (Rogers et al. 2014). We recommend a strategic approach to aspen resilience that builds upon traditional aspen ecology and incorporates knowledge of varying aspen functional types, effective monitoring, historical disturbance ecology, …

Predation Threat Alters Composition And Functioning Of Bromeliad Ecosystems, Edd Hammill, Trisha B. Atwood, Diane S. Srivastava

Wildland Resources Faculty Publications

Predators can have dramatic effects on food web structure and ecosystem processes. However, the total effect of predators will be a combination of prey removal due to consumption and non-consumptive effects (NCEs) mediated through changes to prey behavioral, morphological, or life history traits induced to reduce predation risk. In this study, we examined how consumptive and NCEs alter community composition and ecosystem function using the aquatic ecosystem housed within tropical bromeliads. We allowed the recolonization of emptied bromeliads containing either no predators, caged predators (NCEs only), or uncaged predators (NCEs and consumptive effects) and recorded densities of all macro-invertebrates, microbial …

Managing Ungulate Browsing For Sustainable Aspen, Samuel B. St. Clair, Paul C. Rogers, Michael R. Kuhns

Aspen Bibliography

In montane forests of the Intermountain West composition and function are often defined by what happens with quaking aspen. Aspen is a pioneer species that regenerates quickly following disturbance and then establishes ecological conditions under which the rest of the biological community develops. Quaking aspen forests have high biodiversity and provide ideal habitat for many animals. Aspen regeneration from root sprouts is highly palatable to wildlife and livestock. When browsing becomes chronic it leads to regeneration failure and eventual loss of aspen forests and associated species. Ironically, this can result in habitat and forage loss for wildlife and livestock. Here …

Predicting Invasion Rates For Phragmites Australis, Rachel Nydegger, Jacob Duncan, James A. Powell

Browse All Undergraduate research

In wetlands of Utah and southern Idaho as well as estuaries of the east coast, the ten-foot tall invasive grass Phragmites australis can be found near waterways, where it outcompetes native plants and degrades wildlife habitat. Phragmites australis is an obligate out-crossing plant that can spread sexually through seed disper- sal, or asexually via stolons and rhi- zomes (Kettenring and Mock 2012). Small patches are usually a single genetic individual, spreading vegetatively (and slowly) via runners; when patches become genetically diverse viable seeds are produced and invasion rates can be increase by an order of magnitude (Kettenring et al. 2011)

Stand Dynamics, Humus Type And Water Balance Explain Aspen Long Term Productivity Across Canada, Kenneth A. Anyomi, Francois Lorenzetti, Yves Bergeron, Alain Leduc

Aspen Bibliography

This study examined the relative importance of soil, stand development and climate hypotheses in driving productivity for a species that is widely distributed in North America. Inventory plots, 3548 of such, either dominated by aspen or made up of species mixture of which aspen occurs in dominant canopy position were sampled along a longitudinal gradient from Quebec to British Columbia. Site index (SI), was used as a measure of productivity, and soil, climate and stand attributes were correlated with site index in order to determine their effects on productivity. Results show a decline in productivity with high moisture deficit. Soil …

Naturalization Of Almond Trees (Prunus Dulcis) In Semi-Arid Regions Of The Western Mediterranean., Pablo Homet-Gutierrez, Eugene W. Schupp, José M. Gómez

Wildland Resources Faculty Publications

Agricultural land abandonment is rampant in present day Europe. A major consequence of this phenomenon is the re-colonization of these areas by the original vegetation. However, some agricultural, exotic species are able to naturalize and colonize these abandoned lands. In this study we explore the ability of almonds (Prunus dulcis D.A. Webb.) to establish in abandoned croplands in semi-arid areas of SE Iberian Peninsula. Domesticated during the early Holocene in SW Asia and the Eastern Mediterranean, the almond has spread as a crop all over the world. We established three plots adjacent to almond orchards on land that was abandoned …

Year-End Report On Rac Project Entitled "Propagating Aspen Clones: Survival In The 21st Century", Ralph Baierlein

Aspen Bibliography

Initial damage caused by wild ungulates was minimal. In August 2013, a large elk pulled off five cones and destroyed three saplings on the exposed, eastern side of the exclosure. Although deer tracks were plentiful in the bare earth of the fire line, there was no evidence that deer had harmed the saplings. The combination of a cone and a mesh sleeve on the exposed saplings sufficed.

Comparative Evolutionary Diversity And Phylogenetic Structure Across Multiple Forest Dynamics Plots: A Mega-Phylogeny Approach, D. L. Erickson, F. A. Jones, N. G. Swenson, N. Pei, N. Bourg, W. Chen, S. J. Davies, X. Ge, Z. Hao, R. W. Howe, C. L. Huang, A. Larson, S. Lum, James A. Lutz, K. Ma, M. Meegaskumbura, X. Mi, J. D. Parker

Wildland Resources Faculty Publications

Forest dynamics plots, which now span longitudes, latitudes, and habitat types across the globe, offer unparalleled insights into the ecological and evolutionary processes that determine how species are assembled into communities. Understanding phylogenetic relationships among species in a community has become an important component of assessing assembly processes. However, the application of evolutionary information to questions in community ecology has been limited in large part by the lack of accurate estimates of phylogenetic relationships among individual species found within communities, and is particularly limiting in comparisons between communities. Therefore, streamlining and maximizing the information content of these community phylogenies is …