Ecology and Evolutionary Biology Commons^™

Australian Vegetated Coastal Ecosystems As Global Hotspots For Climate Change Mitigation, Oscar Serrano, Catherine E. Lovelock, Trisha B. Atwood, Peter I. Macreadie, Robert Canto, Stuart Phinn, Ariane Arias-Ortiz, Le Bai, Jeff Baldock, Camila Bedulli, Paul Carnell, Rod M. Connolly, Paul Donaldson, Alba Esteban, Carolyn J. Ewers Lewis, Bradley D. Eyre, Matthew A. Hayes, Pierre Horwitz, Lindsay B. Hutley, Christopher R. J. Kavazos, Jeffrey J. Kelleway, Gary A. Kendrick, Kieryn Kilminster, Anna Lafratta, Shing Lee, Paul S. Lavery, Damien T. Maher, Núria Marbà, Pere Masque, Miguel A. Mateo, Richard Mount, Peter J. Ralph, Chris Roelfsema, Mohammad Rozaimi, Radhiyah Ruhon, Cristian Salinas, Jimena Samper-Villarreal, Jonathan Sanderman, Christian J. Sanders, Isaac Santos, Chris Sharples, Andrew D. L. Steven, Toni Cannard, Stacey M. Trevathan-Tackett, Carlos M. Duarte

Ecology Center Publications

Policies aiming to preserve vegetated coastal ecosystems (VCE; tidal marshes, mangroves and seagrasses) to mitigate greenhouse gas emissions require national assessments of blue carbon resources. Here, we present organic carbon (C) storage in VCE across Australian climate regions and estimate potential annual CO₂ emission benefits of VCE conservation and restoration. Australia contributes 5–11% of the C stored in VCE globally (70–185 Tg C in aboveground biomass, and 1,055–1,540 Tg C in the upper 1 m of soils). Potential CO₂ emissions from current VCE losses are estimated at 2.1–3.1 Tg CO₂-e yr^-1, increasing annual CO …

Importance Of Tree-And Species-Level Interactions With Wildfire, Climate, And Soils In Interior Alaska: Implications For Forest Change Under A Warming Climate, Adrianna C. Foster, Amanda H. Armstrong, Jacquelyn K. Shuman, Herman H. Shugart, Brendan M. Rogers, Michelle C. Mack, Scott J. Goetz, K. Jon Ranson

Aspen Bibliography

The boreal zone of Alaska is dominated by interactions between disturbances, vegetation, and soils. These interactions are likely to change in the future through increasing permafrost thaw, more frequent and intense wildfires, and vegetation change from drought and competition. We utilize an individual tree-based vegetation model, the University of Virginia Forest Model Enhanced (UVAFME), to estimate current and future forest conditions across sites within interior Alaska. We updated UVAFME for application within interior Alaska, including improved simulation of permafrost dynamics, litter decay, nutrient dynamics, fire mortality, and postfire regrowth. Following these updates, UVAFME output on species-specific biomass and stem density …

Everyone In: A Road Map For Science-Based, Collaborative Restoration Of Western Quaking Aspen, Sue Miller

Aspen Bibliography

With concern over the health of aspen in the Intermountain West, public and private land managers need better guidance for evaluating aspen condition and selecting and implementing actions that will be effective in restoring aspen health. The Utah Forest Restoration Group collaboratively synthesized a step-by-step approach for aspen restoration that was applicable to western U.S. forests. In a successful case study in shared stewardship, these restoration guidelines were applied to a challenging real-world setting.The Monroe Mountain Aspen Ecosystem Restoration Project, addressed diverse public and private lands needs and interests using an “All Hands, All Lands” strategy. The Monroe Mountain Working …

Remote Sensing Of Ploidy Level In Quaking Aspen (Populus Tremuloides Michx.), Benjamin Blonder, Bente J. Graae, Burke Greer, Marja Haagsma, Kenny Helsen, Rozália E. Kapás, Henry Pai, Jolanta Rieksta, Dillon Sapena, Christopher J. Still, Richard Strimbeck

Aspen Bibliography

1. Ploidy level in plants may influence ecological functioning, demography and response to climate change. However, measuring ploidy level typically requires intensive cell or molecular methods.
2. We map ploidy level variation in quaking aspen, a dominant North American tree species that can be diploid or triploid and that grows in spatially extensive clones. We identify the predictors and spatial scale of ploidy level variation using a combination of genetic and ground‐based and airborne remote sensing methods.
3. We show that ground‐based leaf spectra and airborne canopy spectra can both classify aspen by ploidy level with a precision‐recall harmonic mean of 0.75–0.95 and …

Worldwide Relationships In The Fern Genus Pteridium (Bracken) Based On Nuclear Genome Markers, Paul G. Wolf, Carol A. Rowe, Sylvia P. Kinosian, Joshua P. Der, Peter J. Lockhart, Lara D. Shepherd, Patricia A. Mclenachan, John A. Thomson

Ecology Center Publications

PREMISE: Spore-bearing plants are capable of dispersing very long distances. However, it is not known if gene flow can prevent genetic divergence in widely distributed taxa. Here we address this issue, and examine systematic relationships at a global geographic scale for the fern genus Pteridium.

METHODS: We sampled plants from 100 localities worldwide, and generated nucleotide data from four nuclear genes and two plastid regions. We also examined 2801 single nucleotide polymorphisms detected by a restriction site-associated DNA approach.

RESULTS: We found evidence for two distinct diploid species and two allotetraploids between them. The “northern” species (Pteridium aquilinum) has distinct …

Modeling Spatially And Temporally Complex Range Dynamics When Detection Is Imperfect, Clark S. Rushing, J. Andrew Royle, David J. Zilkowski, Keith L. Pardieck

Ecology Center Publications

Species distributions are determined by the interaction of multiple biotic and abiotic factors, which produces complex spatial and temporal patterns of occurrence. As habitats and climate change due to anthropogenic activities, there is a need to develop species distribution models that can quantify these complex range dynamics. In this paper, we develop a dynamic occupancy model that uses a spatial generalized additive model to estimate non-linear spatial variation in occupancy not accounted for by environmental covariates. The model is flexible and can accommodate data from a range of sampling designs that provide information about both occupancy and detection probability. Output …

Risk Of Predation: A Critical Force Driving Habitat Quality Perception And Foraging Behavior Of Granivorous Birds In A Nigerian Forest Reserve, Umarfarooq A. Abdulwahab, Samuel Temidayo Osinubi, Jacinta Abalaka

Ecology Center Publications

Background: Understanding the factors that influence the foraging behavior and perception of habitat quality by animals has long been the focus in ecology. Due to the direct effect resource acquisition has on an individual’s fitness and species’ survival, predation risk is considered widely to be a major driver of foraging decision. The objectives of this study were to investigate how predation risk is perceived by granivorous bird species with respect to different habitat and microhabitat types, time of day and food types in Amurum Forest Reserve, Nigeria, with a view to direct future conservation planning.

Methods: For 3 months, we …

Pleasantview Hills Aspen Stand Diversity Project: Environmental Assessment, Pocatello Field Office

Aspen Bibliography

The Bureau of Land Management (BLM) Pocatello Field Office (PFO) has prepared this Environmental Assessment (EA) to analyze the environmental impacts of implementing treatments on aspen stands in the Pleasantview Hills area. This EA discloses the direct, indirect, and cumulative environmental effects that would result from implementation of this proposal as required by the National Environmental Policy Act (NEPA) of 1969. This EA will determine whether to prepare an Environmental Impact Statement (EIS) or a Finding of No Significant Impact (FONSI) based on environmental impact context and intensity, thereby informing agency decision making. Guidance for EA organization is determined by …

Plant-Soil Feedbacks Predict Native But Not Non-Native Plant Community Composition: A 7-Year Common-Garden Experiment, Andrew Kulmatiski

Ecology Center Publications

Plant-soil feedbacks (PSFs) have gained attention as a potential mechanism of plant growth and coexistence, however, because they are typically measured using plant monocultures in greenhouse conditions, the link between PSFs and plant growth in field communities remains poorly tested. Here, PSFs for six native and four non-native species were measured in a 7-year, common-garden experiment. A plant community growth model was then parameterized either with PSF data (PSF model) or without PSF data (Null model). PSF and Null model predictions were compared to plant ground cover in experimental and natural communities. For eight of 10 species, plant cover at …

The Missing Angle: Ecosystem Consequences Of Phenological Mismatch, Karen H. Beard, Katharine C. Kelsey, A. Joshua Leffler, Jeffrey M. Welker

Ecology Center Publications

Climate change leads to unequal shifts in the phenology of interacting species, such as consumers and their resources, leading to potential phenological mismatches. While studies have investigated how phenological mismatch affects wild populations, we still lack studies and a framework for investigating how phenological mismatch affects ecosystems, particularly nutrient cycling.

Sudden Aspen Decline: A Review Of Pattern And Process In A Changing Climate, Jack A. Singer, Rob Turnbull, Mark Foster, Charles Bettigole, Brent R. Frey, Michelle C. Downey, Kristofer R. Covey, Mark S. Ashton

Aspen Bibliography

The American quaking aspen (Populus tremuloides Michx.) and its close relative, the Eurasian quaking aspen (Populus tremula L.), cover a realm that is perhaps the most expansive of all tree species in the world. In North America, sudden aspen decline (SAD) is a growing concern that marks the rapid decline of quaking aspen trees leading to mortality at the stand and landscape scale. Research suggests that drought and water stress are the primary causes of SAD. Predisposing factors (age, structure, and landscape position), as well as associated stressors (i.e., pests and pathogens), have been linked to mortality in affected stands. …

What We (Don’T) Know About Global Plant Diversity, William K. Cornwell, William D. Pearse, Rhiannon L. Dalrymple, Amy E. Zanne

Ecology Center Publications

The era of big biodiversity data has led to rapid, exciting advances in the theoretical and applied biological, ecological and conservation sciences. While large genetic, geographic and trait databases are available, these are neither complete nor random samples of the globe. Gaps and biases in these databases reduce our inferential and predictive power, and this incompleteness is even more worrisome because we are ignorant of both its kind and magnitude. We performed a comprehensive examination of the taxonomic and spatial sampling in the most complete current databases for plant genes, locations and functional traits. To do this, we downloaded data …

Impacts Of Climate And Insect Herbivory On Productivity And Physiology Of Trembling Aspen (Populus Tremuloides) In Alaskan Boreal Forests, Melissa A. Boyd, Logan T. Berner, Patricia Doak, Scott J. Goetz, Brendan M. Rogers, Diane Wagner, Xanthe J. Walker, Michelle C. Mack

Aspen Bibliography

Climate change is impacting forested ecosystems worldwide, particularly in the Northern Hemisphere where warming has increased at a faster rate than the rest of the globe. As climate warms, trembling aspen (Populus tremuloides) is expected to become more successful in northern boreal forests because of its current presence in drier areas of North America. However, large-scale productivity decline of aspen has recently been documented throughout the United States and Canada as a result of drought and insect outbreaks. We used tree ring measurements (basal area increment (BAI) and stable carbon isotopes (δ 13C)) and remote sensing indices …

Nest-Site Selection Of Golden Eagles And Ferruginous Hawks And Diet Composition Of Sensitive Raptor Species Using Metabarcoding Analysis In The Uinta Basin And Ashley National Forest, Ut, Usa, Dylan J. Hopkins

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Development and climate change in the sagebrush habitats are causing population declines of North American hawks and eagles. For these species, understanding the landscape features that are preferred for nesting and the prey they consume in sagebrush habitats are important in developing conservation plans. Specifically, we know little of the preferred nest-sites and diet of Ferruginous Hawks (Buteo regalis) and Golden Eagles (Aquila chrysaetos) many locales. In our study, we determined the landscape characteristics associated with nest sites for these two raptor species in the Uintah Basin, UT to predict where nests may occur in our …

Evaluating The Effectiveness Of Livestock Guardian Dogs: Loss-Prevention, Behavior, Space-Use, And Human Dimensions, Daniel Kinka

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Livestock guardian dogs – or “LGDs” – are commonly used by domestic sheep ranchers and reduce the need for killing wild carnivores to protect livestock. LGDs are mostly used in the United States to reduce the number of livestock killed by coyotes, but whether they can prevent killing by larger carnivores like wolves and grizzly bears is unclear. It is important to identify which behavioral traits and LGD breeds work best for guarding livestock so that ranchers can protect their stock and environmentalists can enjoy a greater number of wild animals on the landscape. This study investigated the effectiveness of …

Using Tree-Ring Growth And Stable Isotopes To Explore Ponderosa Pine Ecophysiological Responses To Climate Variability And The 2012-2015 California Drought, Rachel M. Keen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Climate warming in recent decades has resulted in more frequent and severe drought events in the western United States. These changes are projected to continue, making it exceedingly important to understand how forests respond to severe drought stress, and how we can manage these forests to reduce mortality during future events. The 2012-2015 California drought is a recent example of a severe, multi-year drought that was coupled with an epidemic-scale outbreak of western pine beetle, killing nearly 90% of ponderosa pines in the central and southern Sierra Nevadas. In the first portion of this study, we compared pairs of surviving …

Ecosystem Functioning Of Great Salt Lake Wetlands, Maya Cassidy Pendleton

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The Great Salt Lake (GSL) wetlands account for ~75% of all Utah wetlands and provide not only critical habitat for millions of migratory birds, but also provide valuable ecosystem functions and services as well as economic benefits to Utahns. However, these wetlands are facing an aggressive invader, Phragmites australis, that has spreading across the GSL wetlands and replacing native wetland habitats. Wetland managers have spent countless resources and time trying to control the spread of P. australis and restore GSL wetlands. However, we do not fully understand how these wetlands functions and services are being altered with this habitat …

The Vulnerability Of Littoral Structures Under Multiyear Drought Conditions, Jenna M. Keeton

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Climate change is associated with altered environmental conditions and shifting mosaics of suitable habitats for organisms. Climate change in the form of drought can shift important lake shoreline habitats downslope, altering the lakes chemistry and habitat availability. Additionally, negative biological consequences can occur after a loss of submerged habitat along shorelines, hereafter littoral habitat. The objective of this study is to evaluate whether littoral habitat is lost (cobble, coarse woody habitat (fallen trees; CWH), and aquatic vegetation) under drought conditions across the United States. I used the National Lakes Assessment physical habitat data collected in summer 2012, when 75% of …

Climate Change, Snow Mold And The Bromus Tectorum Invasion: Mixed Evidence For Release From Cold Weather Pathogens, Danielle M. Smull, Nicole Pendleton, Andrew R. Kleinhesselink, Peter B. Adler

Ecology Center Publications

Climate change is reducing the depth and duration of winter snowpack, leading to dramatic changes in the soil environment with potentially important ecological consequences. Previous experiments in the Intermountain West of North America indicated that loss of snowpack increases survival and population growth rates of the invasive annual grass Bromus tectorum; however, the underlying mechanism is unknown. We hypothesized that reduced snowpack might promote B. tectorum population growth by decreasing damage from snow molds, a group of subnivean fungal pathogens. To test this hypothesis, we conducted greenhouse and field experiments to investigate the interaction between early snowmelt and either …

Seedling Emergence Patterns Of Six Restoration Species In Soils From Two Big Sagebrush Plant Communities, Lacey E. Wilder, Kari E. Veblen, Eugene W. Schupp, Thomas A. Monaco

Ecology Center Publications

Despite the critical need to improve degraded herbaceous understory conditions in many semiarid ecosystems, the influence of soil properties on seedling emergence of species seeded in shrubland plant communities is largely unexplored. We evaluated emergence patterns of 6 restoration species in soils from wyomingensis (i.e., Wyoming big sagebrush, Artemisia tridentata ssp. wyomingensis [Beetle & A. Young] S.L. Welsh) and vaseyana (i.e., mountain big sagebrush, A. t. ssp. vaseyana [Rydb.] Beetle) plant communities that differed in soil texture, soil organic matter content, and soil water-holding capacity. We conducted 2 separate experiments that regularly wetted soils to standardized soil water potentials (i.e., …

The Interaction Of Phylogeny And Community Structure: Linking The Community Composition And Trait Evolution Of Clades, William D. Pearse, Pierre Legendre, Pedro R. Peres-Neto, T. Jonathan Davies

Ecology Center Publications

Aim

Community phylogenetic studies use information about the evolutionary relationships of species to understand the ecological processes of community assembly. A central premise of the field is that the evolution of species maps onto ecological patterns, and phylogeny reveals something more than species traits alone about the ecological mechanisms structuring communities, such as environmental filtering, competition, and facilitation. We argue, therefore, that there is a need for better understanding and modelling of the interaction of phylogeny with species traits and community composition.

Innovation

We outline a new approach that identifies clades that are ecophylogenetically clustered or overdispersed and assesses whether …

Guidelines For Aspen Restoration In Utah With Applicability To The Intermountain West, Stanley G. Kitchen, Patrick N. Behrens, Sherel K. Goodrich, Ashley Green, John Guyon, Mary O'Brien, David Tart

Aspen Bibliography

As highly productive and biologically diverse communities, healthy quaking aspen (Populus tremuloides; hereafter aspen) forests provide a wide range of ecosystem services across western North America. Western aspen decline during the last century has been attributed to several causes and their interactions, including altered fire regimes, drought, excessive use by domestic and wild ungulates, and conifer encroachment. Today’s managers need science-based guidance to develop and implement strategies and practices to restore structure, processes, and resilience to the full range of aspen functional types across multiple spatial scales. In these guidelines, we detail a process for making step-by-step decisions …

Drought And Freezing Vulnerability Of The Isolated Hybrid Aspen Populus X Smithii Relative To Its Parental Species, P. Tremuloides And P. Grandidentata, Nicholas J. Deacon, Jake J. Grossman, Jeannine Cavender-Bares

Aspen Bibliography

Aim

We assessed the vulnerability of an isolated, relictual Pleistocene hybrid aspen population of conservation interest (Populus x. smithii ) and the nearest populations of its parent species (Populus grandidentata and Populus tremuloides ) to springtime post‐bud break freezing and growing season drought stress. Response to these stressors in the three taxa was compared in terms of avoidance and tolerance.

Location

North American Midwest; USA.

Methods

Unique genets from the hybrid Niobrara River population and from the two parental populations were propagated in a common garden from rhizome cuttings. We tracked their phenology before and after bud break …

Relating Spatial Patterns Of Stream Metabolism To Distributions Of Juveniles Salmonids At The River Network Scale, Matthew J. Kaylor, Seth M. White, W. Carl Saunders, Dana R. Warren

Watershed Sciences Faculty Publications

Understanding the factors that drive spatial patterns in stream ecosystem processes and the distribution of aquatic biota is important to effective management of these systems and the conservation of biota at the network scale. In this study, we conducted field surveys throughout an extensive river network in NE Oregon that supports diminishing populations of wild salmonids. We collected data on physical habitat, nutrient concentrations, biofilm standing stocks, stream metabolism (gross primary production [GPP] and ecosystem respiration [ER]), and ESA‐listed juvenile salmonid density from approximately 50 sites across two sub‐basins. Our goals were to (1) to evaluate network patterns in these …

Mind The Gap: Experimental Tests To Improve Efficacy Of Fladry For Nonlethal Management Of Coyotes, Julie K. Young, John P. Draper, Stewart Breck

Ecology Center Publications

Coyotes (Canis latrans) are the top predator of livestock in the contiguous United States. Developing more effective nonlethal tools to prevent coyote depredation will facilitate coexistence between livestock producers and coyotes. Fladry is a nonlethal deterrent designed to defend livestock by creating a visual barrier to wolves (C. lupus). Fladry may also be effective with coyotes, but large gap spacing between flags may reduce its efficacy. To address this issue, we performed 2 experiments on captive coyotes using fladry modified to reduce gap spacing at the U.S. Department of Agriculture, Predator Research Facility in Millville, Utah, …

Assessing The Utility Of Conserving Evolutionary History, Caroline M. Tucker, Tracy Aze, Marc W. Cadotte, Juan L. Cantalapiedra, Chelsea Chisholm, Sandra Díaz, Richard Grenyer, Danwei Huang, Florent Mazel, William D. Pearse, Matthew W. Pennell, Marten Winter, Arne O. Mooers

Ecology Center Publications

It is often claimed that conserving evolutionary history is more efficient than species‐based approaches for capturing the attributes of biodiversity that benefit people. This claim underpins academic analyses and recommendations about the distribution and prioritization of species and areas for conservation, but evolutionary history is rarely considered in practical conservation activities. One impediment to implementation is that arguments related to the human‐centric benefits of evolutionary history are often vague and the underlying mechanisms poorly explored. Herein we identify the arguments linking the prioritization of evolutionary history with benefits to people, and for each we explicate the purported mechanism, and evaluate …

Space Use And Movement Of Urban Bobcats, Julie K. Young, Julie M. Golla, John P. Draper, Derek Broman, Terry Blankenship, Richard Heilbrun

Wildland Resources Faculty Publications

Global urbanization is rapidly changing the landscape for wildlife species that must learn to persist in declining wild spacing, adapt, or risk extinction. Many mesopredators have successfully exploited urban niches, and research on these species in an urban setting offers insights into the traits that facilitate their success. In this study, we examined space use and activity patterns from GPS-collared bobcats (Lynx rufus) in the Dallas–Fort Worth metroplex, Texas, USA. We found that bobcats select for natural/agricultural features, creeks, and water ways and there is greater home-range overlap in these habitats. They avoid roads and are less likely …

Carbon Control On Terrestrial Ecosystem Function Across Contrasting Site Productivities: The Carbon Connection Revisited, Nicholas C. Dove, John M. Stark, Gregory S. Newman, Stephen C. Hart

Ecology Center Publications

Understanding how altered soil organic carbon (SOC) availability affects microbial communities and their function is imperative in predicting impacts of global change on soil carbon (C) storage and ecosystem function. However, the response of soil microbial communities and their function to depleted C availability in situ is unclear. We evaluated the role of soil C inputs in controlling microbial biomass, community composition, physiology, and function by (1) experimentally excluding plant C inputs in situ for 9 yr in four temperate forest ecosystems along a productivity gradient in Oregon, USA; and (2) integrating these findings with published data from similar C‐exclusion …

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