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Articles 121 - 150 of 194
Full-Text Articles in Ecology and Evolutionary Biology
Social Buffering In A Eusocial Invertebrate: Termite Soldiers Reduce The Lethal Impact Of Competitor Cues On Workers, Li Tian, Evan L. Preisser, Kenneth F. Haynes, Xuguo Zhou
Social Buffering In A Eusocial Invertebrate: Termite Soldiers Reduce The Lethal Impact Of Competitor Cues On Workers, Li Tian, Evan L. Preisser, Kenneth F. Haynes, Xuguo Zhou
Entomology Faculty Publications
While the impact of predator‐induced stress on prey has received considerable attention, there has been far less research into the effect of competitors. Cues from aggressive competitors should be particularly likely to evoke behavioral and/or physiological responses, since they may be indicative of both direct (interference) and indirect (exploitative) threats. The danger posed by such competitors, and the “fear” they evoke, should be reduced at lower competitor densities and by the presence of individual conspecifics specialized for defense. We assessed how Reticulitermes flavipes termite workers and soldiers were affected by cues from conspecific nestmates, conspecific non‐nestmates, and the heterospecific competitor …
Recruitment Of Reviewers Is Becoming Harder At Some Journals: A Test Of The Influence Of Reviewer Fatigue At Six Journals In Ecology And Evolution, Charles W. Fox, Arianne Y. K. Albert, Timothy H. Vines
Recruitment Of Reviewers Is Becoming Harder At Some Journals: A Test Of The Influence Of Reviewer Fatigue At Six Journals In Ecology And Evolution, Charles W. Fox, Arianne Y. K. Albert, Timothy H. Vines
Entomology Faculty Publications
Background: It is commonly reported by editors that it has become harder to recruit reviewers for peer review and that this is because individuals are being asked to review too often and are experiencing reviewer fatigue. However, evidence supporting these arguments is largely anecdotal.
Main body: We examine responses of individuals to review invitations for six journals in ecology and evolution. The proportion of invitations that lead to a submitted review has been decreasing steadily over 13 years (2003–2015) for four of the six journals examined, with a cumulative effect that has been quite substantial (average decline from 56% of …
Effect Of Seed Position On Parental Plant On Proportion Of Seeds Produced With Nondeep And Intermediate Physiological Dormancy, Juan J. Lu, Dun Y. Tan, Carol C. Baskin, Jerry M. Baskin
Effect Of Seed Position On Parental Plant On Proportion Of Seeds Produced With Nondeep And Intermediate Physiological Dormancy, Juan J. Lu, Dun Y. Tan, Carol C. Baskin, Jerry M. Baskin
Biology Faculty Publications
The position in which seeds develop on the parental plant can have an effect on dormancy-break and germination. We tested the hypothesis that the proportion of seeds with intermediate physiological dormancy (PD) produced in the proximal position on a raceme of Isatis violascens plants is higher than that produced in the distal position, and further that this difference is related to temperature during seed development. Plants were watered at 3-day intervals, and silicles and seeds from the proximal (early) and distal (late) positions of racemes on the same plants were collected separately and tested for germination. After 0 and 6 …
Oviposition Traits Generate Extrinsic Postzygotic Isolation Between Two Pine Sawfly Species, Emily E. Bendall, Kim L. Vertacnik, Catherine R. Linnen
Oviposition Traits Generate Extrinsic Postzygotic Isolation Between Two Pine Sawfly Species, Emily E. Bendall, Kim L. Vertacnik, Catherine R. Linnen
Biology Faculty Publications
Background: Although empirical data indicate that ecological speciation is prevalent in nature, the relative importance of different forms of reproductive isolation and the traits generating reproductive isolation remain unclear. To address these questions, we examined a pair of ecologically divergent pine-sawfly species: while Neodiprion pinetum specializes on a thin-needled pine (Pinus strobus), N. lecontei utilizes thicker-needled pines. We hypothesized that extrinsic postzygotic isolation is generated by oviposition traits. To test this hypothesis, we assayed ovipositor morphology, oviposition behavior, and host-dependent oviposition success in both species and in F1 and backcross females.
Results: Compared to N. lecontei, N. …
Effect Of Seed Morph And Light Level On Growth And Reproduction Of The Amphicarpic Plant Amphicarpaea Edgeworthii (Fabaceae), Keliang Zhang, Jerry M. Baskin, Carol C. Baskin, Xuejun Yang, Zhenying Huang
Effect Of Seed Morph And Light Level On Growth And Reproduction Of The Amphicarpic Plant Amphicarpaea Edgeworthii (Fabaceae), Keliang Zhang, Jerry M. Baskin, Carol C. Baskin, Xuejun Yang, Zhenying Huang
Biology Faculty Publications
Amphicarpic plants produce aerial and subterranean fruits on an individual plant, and these heteromorphic diaspores give rise to plants that differ in growth and ecology. Amphicarpaea edgeworthii is a summer annual amphicarpic species that grows over a range of light levels. We aimed to compare the response to shading intensity of plants of A. edgeworthii grown throughout their life cycle from aerial seeds (ASP) and from subterranean seeds (SSP). We hypothesized that vegetative and reproductive growth of plants from ASP and SSP respond differently to light. Plants were grown from ASP and SSP under 0, 46, 71 and 90% shading …
Vegetation Response To Repeated Prescribed Burning And Varied Wildfire Severity In Upland Forests On The Cumberland Plateau, Kentucky, Zachary W. Poynter
Vegetation Response To Repeated Prescribed Burning And Varied Wildfire Severity In Upland Forests On The Cumberland Plateau, Kentucky, Zachary W. Poynter
Theses and Dissertations--Forestry and Natural Resources
As a result of decades of fire suppression, oaks (Quercus L.) and other disturbance-dependent tree species are experiencing widespread regeneration failure. Today, fire takes the form of relatively low to moderate intensity prescribed fire, used to restore fire adapted ecosystems, and wildfires which often vary in severity. I investigated long-term changes to forest structure and composition in response to repeated prescribed burning followed by an extended period of no fire. Burning reduced total basal area, midstory stem density and sapling stem density. However, the fire-free interval significantly increased sapling layer stem densities of oaks and competitor species. This research …
Sexual Dimorphism In The Moss Bryum Argenteum And Its Implications For Sex Ratio Bias, Jonathan David Moore Iii
Sexual Dimorphism In The Moss Bryum Argenteum And Its Implications For Sex Ratio Bias, Jonathan David Moore Iii
Theses and Dissertations--Biology
In dioecious plants, selection due to sex function differences has produced sex-specific life histories, morphologies, and physiologies. In many dioecious seed plants, dimorphisms and population sex ratios have been plausibly linked, but similar links are not yet apparent in dioecious bryophytes. Population sex ratio bias is often expected to favor the sex with lower investment in sexual reproduction, especially in resource-poor environments. Unlike in seed plants, bryophyte males may have higher average reproductive investment than females, which typically have low offspring production rates due to sperm limitation. However, traits aside from reproductive investment such as shoot and leaf arrangement may …
Examining The Role Of Host Use On Divergence In The Redheaded Pine Sawfly, Neodiprion Lecontei, Across Multiple Spatial Scales, Robin Kimberly Bagley
Examining The Role Of Host Use On Divergence In The Redheaded Pine Sawfly, Neodiprion Lecontei, Across Multiple Spatial Scales, Robin Kimberly Bagley
Theses and Dissertations--Biology
Phytophagous insects make up over one quarter of described species on Earth, and this incredible diversity seems directly linked to feeding on plants. Comparative studies of sister groups have shown shifts to herbivory are consistently associated with increased species diversity in insects, but the reasons for this diversification remain unclear. While other explanations, such as decreased extinction rates or influences on population structure, exist, one prominent hypothesis suggests shifts and subsequent adaptation to novel host plants can lead to the evolution of reproductive barriers.
Given their extreme specialization on host plants in the genus Pinus and intimate, life-long association with …
Fluvial-Lacustrine Processes Shaping The Landforms Of The Distal Paraguay Fluvial Megafan, Edward Limin Lo
Fluvial-Lacustrine Processes Shaping The Landforms Of The Distal Paraguay Fluvial Megafan, Edward Limin Lo
Theses and Dissertations--Earth and Environmental Sciences
Tropical wetlands such as the Pantanal help regulate global biogeochemical cycles, but climate change is modifying these environments. Controls on environmental changes can potentially be assessed from ancient, well-dated lacustrine sedimentary records. An integrated field and laboratory approach was undertaken to study the limnogeology of Lake Uberaba in the northern Pantanal, and test whether the lake has preserved a reliable record of environmental change in its strata. This study was designed to understand how the basin accumulates sediment and to assess its sensitivity to hydroclimatic variability. The data showed that modern Lake Uberaba is a highly dynamic, freshwater fluvial-lacustrine basin. …
Establishment Of American Chestnuts On Surface Mined Lands In Appalachian Coalfields Region, Michael E. French
Establishment Of American Chestnuts On Surface Mined Lands In Appalachian Coalfields Region, Michael E. French
Theses and Dissertations--Forestry and Natural Resources
American chestnut (Castanea dentata (Marsh.) Borkh.) was an dominant hardwood throughout eastern North America until the introduction of an exotic fungus (Cryphonectria parasitica (Murr.) Barr) in the early 20th century devastated American chestnut populations. Chestnuts that have been bred for blight resistance have recently become available for testing. Due to the overlap of American chestnut’s natural range and the Appalachian coalfields region, the potential establishment of founder populations of blight-resistant chestnuts on reclaimed coal surface mines has recently gained attention. This work examined chestnut establishment on a surface mine in eastern Kentucky to assess factors controlling early …
Altitude- And Sex-Specific Variation In Roosting Ecology And Thermoregulation Of Myotis Lucifugus In Yellowstone National Park, Alexandra C. Slusher
Altitude- And Sex-Specific Variation In Roosting Ecology And Thermoregulation Of Myotis Lucifugus In Yellowstone National Park, Alexandra C. Slusher
Theses and Dissertations--Forestry and Natural Resources
Fifty-nine female and six male little brown myotis (Myotis lucifugus) were radio-tagged during the summers of 2012, 2013, 2014, and 2015 in Yellowstone National Park. The grand models for daily maximum skin temperature (F98,154 = 1.55, P = 0.007), daily minimum skin temperature (F98,154 = 1.33, P = 0.05), and daily variation in skin temperature (F98,154 = 1.56, P = 0.006) were significant across roost type and reproductive condition class for adult females. Roosts were classified into Types A (warmest roosts), B (roosts with largest daily temperature variance), and C (stable and cool roosts) depending …
Evolution Of Equine Arteritis Virus During Persistent Infection In The Reproductive Tract Of The Stallion And The Male Donkey, Bora Nam
Theses and Dissertations--Veterinary Science
Equine arteritis virus (EAV) establishes persistent infection in the stallion reproductive tract, and the carrier stallion continues to shed virus in semen for weeks to years or lifelong. The objective of this study was to elucidate the intra-host evolution of EAV during persistent infection in stallions. Seven EAV seronegative stallions were experimentally infected with EAV KY84 strain and followed for 726 days post-infection, and sequential clinical samples including semen were collected for virus isolation and next-generation sequencing (NGS). In addition, archived sequential semen samples from two stallions that were naturally infected with EAV KY84 for a long-period (up to 10 …
Invasion Dynamics Of The Exotic Liana Euonymus Fortunei (Turcz.) Hand.-Mazz. (Wintercreeper), Todd J. Rounsaville
Invasion Dynamics Of The Exotic Liana Euonymus Fortunei (Turcz.) Hand.-Mazz. (Wintercreeper), Todd J. Rounsaville
Theses and Dissertations--Biology
Elevated atmospheric CO2 has been implicated as a driver of increased liana abundance worldwide. Known as disturbance creators and beneficiaries, lianas possess the potential to significantly influence forest ecosystems. I investigated the early-invasion dynamics of Euonymus fortunei (wintercreeper), an evergreen liana that is invading forests in eastern North America, disrupting native plant communities and ecosystem functions.
Wintercreeper is widely cultivated as an ornamental groundcover, frequently invading natural areas via asexual stem growth. Invasion of remote natural areas is dependent upon seed transport and may occur less frequently. I examined the mechanisms of seed dormancy by conducting a ‘move-along’ experiment …
Genetic Perspectives On Biodiversity In Rocky Mountain Alpine Streams, Scott Hotaling
Genetic Perspectives On Biodiversity In Rocky Mountain Alpine Streams, Scott Hotaling
Theses and Dissertations--Biology
In alpine regions worldwide, climate change is dramatically altering ecosystems, affecting biodiversity across habitats and taxonomic scales. For streams, the associated recession of mountain glaciers and snowfields, paired with altered precipitation regimes, are driving shifts in hydrology, species distributions, and basal resources – often threatening the very existence of some habitats and biota. Globally, alpine streams harbor particularly substantial species and genetic diversity due to significant habitat insularity and environmental heterogeneity: however, anthropogenic warming threatens to homogenize habitats through the reduction of the cryosphere, thereby reducing biodiversity from micro- to macroscopic organisms and genes to communities. Still, alpine stream biodiversity, …
Mitochondrial And Nuclear Patterns Of Conflict And Concordance At The Gene, Genome, And Behavioral Scales In Desmognathus Salamanders, Justin D. Kratovil
Mitochondrial And Nuclear Patterns Of Conflict And Concordance At The Gene, Genome, And Behavioral Scales In Desmognathus Salamanders, Justin D. Kratovil
Theses and Dissertations--Biology
Advancements in molecular sequencing have revealed unexpected cryptic genetic diversity and contrasting evolutionary histories within genes and between genomes of many organisms; often in disagreement with recognized taxonomy. Incongruent patterns between the mitochondrial and nuclear evolutionary history can have several plausible explanations, but widespread systematic conflict inevitably challenges our conceptions of species boundaries when there is discordance between coevolving and coinherited genomes. It is unknown to what degree mitonuclear conflict drives the process of divergence, or how ubiquitous these patterns are across the tree of life. To understand the evolutionary relevance of intergenomic discordance we must identify the conflicting patterns …
Using Genomics To Understand Population Demographics In The Context Of Amphibian Conservation, Schyler O. Nunziata
Using Genomics To Understand Population Demographics In The Context Of Amphibian Conservation, Schyler O. Nunziata
Theses and Dissertations--Biology
Understanding the demography of species over recent history (e.g., < 100 years) is critical in studies of ecology and evolution, but records of population history are rarely available. Large single nucleotide polymorphism datasets generated with restriction-site associated DNA sequencing (RADseq), in combination with demographic inference methods, are improving our ability to gain insights into the population history of both model and non-model species. However, to assess the performance of genetic methods it is important to compare their estimates of population history to known demography, in both simulation and empirical settings. Here, I used a simulation approach to examine the potential for RADseq datasets to accurately estimate effective population size (Ne) in Wright-Fisher populations over the course of stable and declining population trends, and distinguish stable from steadily declining populations over a contemporary time scale (20 generations). Overall, my results reveal that demographic inference using genome-wide data can be successfully applied to estimate Ne, and the detection of population-size declines. Next, I assess these methods in an empirical study from a wetland with 37 years of amphibian mark-recapture data to study the utility of genetically-based demographic inference on salamander species with documented population declines (Ambystoma talpoideum) and …
Genomic Perspectives On Amphibian Evolution Across Multiple Phylogenetic Scales, Paul Michael Hime
Genomic Perspectives On Amphibian Evolution Across Multiple Phylogenetic Scales, Paul Michael Hime
Theses and Dissertations--Biology
Genomes provide windows into the evolutionary histories of species. The recent accessibility of genome-scale data in non-model organisms and the proliferation of powerful statistical models are now providing unprecedented opportunities to uncover evolutionary relationships and to test hypotheses about the processes that generate and maintain biodiversity. This dissertation work reveals shallow-scale species boundaries and population genetic structure in two imperiled groups of salamanders and demonstrates that the number and information content of genomic regions used in species delimitation exert strong effects on the resulting inferences. Genome scans are employed to test hypotheses about the mechanisms of genetic sex determination in …
Genome Of The Asian Longhorned Beetle (Anoplophora Glabripennis), A Globally Significant Invasive Species, Reveals Key Functional And Evolutionary Innovations At The Beetle-Plant Interface, Duane D. Mckenna, Erin D. Scully, Yannick Pauchet, Kelli Hoover, Roy Kirsch, Scott M. Geib, Robert F. Mitchell, Robert M. Waterhouse, Seung-Joon Ahn, Deanna Arsala, Joshua B. Benoit, Heath Blackmon, Tiffany Bledsoe, Julia H. Bowsher, André Busch, Bernarda Calla, Hsu Chao, Anna K. Childers, Christopher Childers, Dave J. Clarke, Lorna Cohen, Jeffery P. Demuth, Huyen Dinh, Harshavardhan Doddapaneni, Amanda Dolan, Jian J. Duan, Shannon Dugan, Markus Friedrich, Karl M. Glastad, Michael A. D. Goodisman, Stephanie Haddad, Yi Han, Daniel S. T. Hughes, Panagiotis Ioannidis, J. Spencer Johnston, Jeffery W. Jones, Leslie A. Kuhn, David R. Lance, Chien-Yueh Lee, Sandra L. Lee, Han Lin, Jeremy A. Lynch, Armin P. Moczek, Shwetha C. Murali, Donna M. Muzny, David R. Nelson, Subba R. Palli, Kristen A. Panfilio, Dan Pers, Monica F. Poelchau, Honghu Quan, Jiaxin Qu, Ann M. Ray, Joseph P. Rinehart, Hugh M. Robertson, Richard Roehrdanz, Andrew J. Rosendale, Seunggwan Shin, Christian Silva, Alex S. Torson, Iris M. Vargas Jentzsch, John H. Werren, Kim C. Worley, George Yocum, Evgeny M. Zdobnov, Richard A. Gibbs, Stephen Richards
Genome Of The Asian Longhorned Beetle (Anoplophora Glabripennis), A Globally Significant Invasive Species, Reveals Key Functional And Evolutionary Innovations At The Beetle-Plant Interface, Duane D. Mckenna, Erin D. Scully, Yannick Pauchet, Kelli Hoover, Roy Kirsch, Scott M. Geib, Robert F. Mitchell, Robert M. Waterhouse, Seung-Joon Ahn, Deanna Arsala, Joshua B. Benoit, Heath Blackmon, Tiffany Bledsoe, Julia H. Bowsher, André Busch, Bernarda Calla, Hsu Chao, Anna K. Childers, Christopher Childers, Dave J. Clarke, Lorna Cohen, Jeffery P. Demuth, Huyen Dinh, Harshavardhan Doddapaneni, Amanda Dolan, Jian J. Duan, Shannon Dugan, Markus Friedrich, Karl M. Glastad, Michael A. D. Goodisman, Stephanie Haddad, Yi Han, Daniel S. T. Hughes, Panagiotis Ioannidis, J. Spencer Johnston, Jeffery W. Jones, Leslie A. Kuhn, David R. Lance, Chien-Yueh Lee, Sandra L. Lee, Han Lin, Jeremy A. Lynch, Armin P. Moczek, Shwetha C. Murali, Donna M. Muzny, David R. Nelson, Subba R. Palli, Kristen A. Panfilio, Dan Pers, Monica F. Poelchau, Honghu Quan, Jiaxin Qu, Ann M. Ray, Joseph P. Rinehart, Hugh M. Robertson, Richard Roehrdanz, Andrew J. Rosendale, Seunggwan Shin, Christian Silva, Alex S. Torson, Iris M. Vargas Jentzsch, John H. Werren, Kim C. Worley, George Yocum, Evgeny M. Zdobnov, Richard A. Gibbs, Stephen Richards
Entomology Faculty Publications
Background: Relatively little is known about the genomic basis and evolution of wood-feeding in beetles. We undertook genome sequencing and annotation, gene expression assays, studies of plant cell wall degrading enzymes, and other functional and comparative studies of the Asian longhorned beetle, Anoplophora glabripennis, a globally significant invasive species capable of inflicting severe feeding damage on many important tree species. Complementary studies of genes encoding enzymes involved in digestion of woody plant tissues or detoxification of plant allelochemicals were undertaken with the genomes of 14 additional insects, including the newly sequenced emerald ash borer and bull-headed dung beetle.
Results: …
Two Complete Mitochondrial Genomes From Praticolella Mexicana Perez, 2011 (Polygyridae) And Gene Order Evolution In Helicoidea (Mollusca, Gastropoda), Russell L. Minton, Marco A. Martinez Cruz, Mark L. Farman, Kathryn E. Perez
Two Complete Mitochondrial Genomes From Praticolella Mexicana Perez, 2011 (Polygyridae) And Gene Order Evolution In Helicoidea (Mollusca, Gastropoda), Russell L. Minton, Marco A. Martinez Cruz, Mark L. Farman, Kathryn E. Perez
Plant Pathology Faculty Publications
Helicoidea is a diverse group of land snails with a global distribution. While much is known regarding the relationships of helicoid taxa, comparatively little is known about the evolution of the mitochondrial genome in the superfamily. We sequenced two complete mitochondrial genomes from Praticolella mexicana Perez, 2011 representing the first such data from the helicoid family Polygyridae, and used them in an evolutionary analysis of mitogenomic gene order. We found the mitochondrial genome of P. mexicana to be 14,008 bp in size, possessing the typical 37 metazoan genes. Multiple alternate stop codons are used, as are incomplete stop codons. Mitogenome …
Multiple Lines Of Evidence From Mitochondrial Genomes Resolve Phylogenetic Relationships Of Parasitic Wasps In Braconidae, Qian Li, Shu-Jun Wei, Pu Tang, Qiong Wu, Min Shi, Michael J. Sharkey, Xue-Xin Chen
Multiple Lines Of Evidence From Mitochondrial Genomes Resolve Phylogenetic Relationships Of Parasitic Wasps In Braconidae, Qian Li, Shu-Jun Wei, Pu Tang, Qiong Wu, Min Shi, Michael J. Sharkey, Xue-Xin Chen
Entomology Faculty Publications
The rapid increase in the number of mitochondrial genomes in public databases provides opportunities for insect phylogenetic studies; but it also provides challenges because of gene rearrangements and variable substitution rates among both lineages and sites. Typically, phylogenetic studies use mitochondrial sequence data but exclude other features of the mitochondrial genome from analyses. Here, we undertook large-scale sequencing of mitochondrial genomes from a worldwide collection of specimens belonging to Braconidae, one of the largest families of Metazoa. The strand-asymmetry of base composition in the mitochondrial genomes of braconids is reversed, providing evidence for monophyly of the Braconidae. We have reconstructed …
Quantitative Evidence For The Effects Of Multiple Drivers On Continental-Scale Amphibian Declines, Evan H. Campbell Grant, David A. W. Miller, Benedikt R. Schmidt, Michael J. Adams, Staci M. Amburgey, Thierry Chambert, Sam S. Cruickshank, Robert N. Fisher, David M. Green, Blake R. Hossack, Pieter T. J. Johnson, Maxwell B. Joseph, Tracy A. G. Rittenhouse, Maureen E. Ryan, J. Hardin Waddle, Susan C. Walls, Larissa L. Bailey, Gary M. Fellers, Thomas A. Gorman, Andrew M. Ray, David S. Pilliod, Steven J. Price, Daniel Saenz, Walt Sadinski, Erin Muths
Quantitative Evidence For The Effects Of Multiple Drivers On Continental-Scale Amphibian Declines, Evan H. Campbell Grant, David A. W. Miller, Benedikt R. Schmidt, Michael J. Adams, Staci M. Amburgey, Thierry Chambert, Sam S. Cruickshank, Robert N. Fisher, David M. Green, Blake R. Hossack, Pieter T. J. Johnson, Maxwell B. Joseph, Tracy A. G. Rittenhouse, Maureen E. Ryan, J. Hardin Waddle, Susan C. Walls, Larissa L. Bailey, Gary M. Fellers, Thomas A. Gorman, Andrew M. Ray, David S. Pilliod, Steven J. Price, Daniel Saenz, Walt Sadinski, Erin Muths
Forestry and Natural Resources Faculty Publications
Since amphibian declines were first proposed as a global phenomenon over a quarter century ago, the conservation community has made little progress in halting or reversing these trends. The early search for a “smoking gun” was replaced with the expectation that declines are caused by multiple drivers. While field observations and experiments have identified factors leading to increased local extinction risk, evidence for effects of these drivers is lacking at large spatial scales. Here, we use observations of 389 time-series of 83 species and complexes from 61 study areas across North America to test the effects of 4 of the …
Investigations In Cryptic Species: Considerations And Applications For Estimating Detection, Occupancy, And Abundance Of Semi-Aquatic Snakes, Christian Robert Oldham
Investigations In Cryptic Species: Considerations And Applications For Estimating Detection, Occupancy, And Abundance Of Semi-Aquatic Snakes, Christian Robert Oldham
Theses and Dissertations--Forestry and Natural Resources
Snake species are notoriously difficult to study in the field due to their cryptic natural-histories and secretive behaviors. Difficulties associated with detection present challenges estimating parameters including occupancy and abundance, as well as responses to habitat degradation. Our objectives were to use Passive Integrated Transponder (PIT) telemetry to enhance detection of Queensnakes (Regina septemvittata) as compared to traditional capture-mark-recapture (CMR) survey techniques and to examine occupancy and abundance of Queensnakes and Northern Watersnakes (Nerodia sipedon) in streams of differing levels of anthropogenic impact within Central Kentucky. During 2013, we captured Queensnakes and implanted them with PIT …
Influence Of Structural Disturbance On Stream Function And Macroinvertebrate Communities In Upper Coastal Plain Headwater Streams, Richard Andrew Biemiller
Influence Of Structural Disturbance On Stream Function And Macroinvertebrate Communities In Upper Coastal Plain Headwater Streams, Richard Andrew Biemiller
Theses and Dissertations--Entomology
Freshwater is a resource under threat due to anthropogenic actions. Stream restoration is a common method for mitigating disturbance. Inconsistent methodologies used for evaluating restorations have drawn criticism. Limited use of baseline data for guiding stream restoration activities is of particular concern. This study was developed to elucidate metrics that differentiate reference and disturbed sites in Upper Coastal Plain streams. This information could improve resource use and successes of restorations. Structural and functional variables were examined in 10 reference and 10 streams that meet the traditional definition of disturbance and would be restoration priorities. Disturbed streams were classified into two …
Ecology Of Two Reintroduced Black Bear Populations In The Central Appalachians, Sean Mccarthy Murphy
Ecology Of Two Reintroduced Black Bear Populations In The Central Appalachians, Sean Mccarthy Murphy
Theses and Dissertations--Animal and Food Sciences
Reintroduced populations are vulnerable to demographic and environmental stochasticity, deleterious genetic effects, and reduced population fitness, all of which can increase extinction probability. Population viability is principle to determining the status of reintroduced populations and for guiding management decisions. To attempt to reestablish black bear (Ursus americanus) populations in the central Appalachians, two reintroductions using small founder groups occurred during the 1990s in the Big South Fork area along the Kentucky-Tennessee border (BSF) and in the Jefferson National Forest along the Kentucky-Virginia border (KVP). My objectives were to estimate demographic and genetic parameters, and to evaluate long-term viability …
Effects Of Epichloë Coenophiala−Tall Fescue Symbiosis On Plant-Microbe-Soil Interactions In A Temperate Pasture, Lindsey C. Slaughter
Effects Of Epichloë Coenophiala−Tall Fescue Symbiosis On Plant-Microbe-Soil Interactions In A Temperate Pasture, Lindsey C. Slaughter
Theses and Dissertations--Plant and Soil Sciences
Plants interact in myriad ways with microorganisms to influence ecosystem processes such as nutrient cycling, which can regulate ecosystem response to global change. One important plant-microbe symbiosis occurs between cool-season grasses and asexual fungal Epichloë endophytes, such as tall fescue (Schedonorus arundinaceus) and Epichloë coenophiala. Because the common toxic strain of the endophyte (CTE) harms grazing livestock, non-livestock toxic endophyte (NTE) strains have been developed and are increasingly deployed in pastures. Little is known about how these symbioses impact other plant-microbe interactions and microbe-mediated soil processes in grassland ecosystems. I conducted three studies to determine how E. …
Effects Of Mountaintop Removal Mining On Population Dynamics Of Stream Salamanders, Sara B. Freytag
Effects Of Mountaintop Removal Mining On Population Dynamics Of Stream Salamanders, Sara B. Freytag
Theses and Dissertations--Forestry and Natural Resources
Mountaintop removal mining (MTR) is a notorious stressor of stream ecosystems in the Central Appalachians. Valley fills (VF) lead to reduced occupancy, abundance, and species richness of stream salamanders. Multiple factors may be responsible for these reductions, but specifically habitat fragmentation and degradation may reduce colonization rates and increase local extinction rates. From 2013-2015, repeated counts of salamanders were conducted in stream reaches impacted by MTR/VF and compared to counts in reference reaches to answer the question: do stream salamander population dynamics differ between stream reaches impacted by MTR/VF and reference stream reaches? I also investigated dynamics of stream habitat …
Population Genetic Structure Of Necturus Maculosus In Central And Eastern Kentucky, Mason Owen Murphy
Population Genetic Structure Of Necturus Maculosus In Central And Eastern Kentucky, Mason Owen Murphy
Theses and Dissertations--Biology
Population structure is influenced by extrinsic factors, such as landscape architecture and dispersal barriers. Lotic network architecture is known to constrain ecological, demographic and evolutionary processes, including population genetic structure. I assessed the population structure of a widespread aquatic salamander, Necturus maculosus, across three river basins in central and eastern Kentucky. I examined the role of network architecture, anthropogenic barriers, and spatial scale on patterns of population structure. I also provided a review of N. maculosus capture methods and offer an improved trap design. I identified significant structuring between the combined Licking/Kinniconick basin and the Kentucky River basin, with …
Transcriptional Regulation Of Specialized Metabolites In Arabidopsis Thaliana And Catharanthus Roseus, Craig M. Schluttenhofer
Transcriptional Regulation Of Specialized Metabolites In Arabidopsis Thaliana And Catharanthus Roseus, Craig M. Schluttenhofer
Theses and Dissertations--Plant and Soil Sciences
For millennia humans have utilized plant specialized metabolites for health benefits, fragrances, poisons, spices, and medicine. Valued metabolites are often produced in small quantities and may command high prices. Understanding when and how the plant synthesizes these compounds is important for improving their production. Phytohormone signaling cascades, such as jasmonate (JA) activate or repress transcription factors (TF) controlling expression of metabolite biosynthetic genes. TFs regulating specialized metabolite biosynthetic genes can be manipulated to engineer plants with increased metabolite production.
WRKY transcription factor are known components of both JA signaling cascades and regulation of specialized metabolism. The presence of WRKY binding …
Ecohydraulic Investigation Of Diatoms In A Bedrock-Controlled Stream, Alex M. Rittle
Ecohydraulic Investigation Of Diatoms In A Bedrock-Controlled Stream, Alex M. Rittle
Theses and Dissertations--Geography
Recent studies within the past decade or so have shown the importance of algae in geomorphic and hydrologic processes of lotic systems. However, the ecohydraulic role of algae in bedrock systems has largely been ignored. In addition, the utility of algae as indicators of channel dynamics have often been assumed by geomorphologists, but relatively few studies have examined this relationship. The purpose of this study was to determine whether algae, specifically diatoms, are useful indicators of channel geomorphological dynamics, and to examine if distinct habitats or biotopes typical in fluviokarst and bedrock systems provide unique habitat space for diatoms, and …
Target-Directed Biosynthetic Evolution: Redirecting Plant Evolution To Genomically Optimize A Plant’S Pharmacological Profile, Dustin Paul Brown
Target-Directed Biosynthetic Evolution: Redirecting Plant Evolution To Genomically Optimize A Plant’S Pharmacological Profile, Dustin Paul Brown
Theses and Dissertations--Neuroscience
The dissertation describes a novel method for plant drug discovery based on mutation and selection of plant cells. Despite the industry focus on chemical synthesis, plants remain a source of potent and complex bioactive metabolites. Many of these have evolved as defensive compounds targeted on key proteins in the CNS of herbivorous insects, for example the insect dopamine transporter (DAT). Because of homology with the human DAT protein some of these metabolites have high abuse potential, but others may be valuable in treating drug dependence. This dissertation redirects the evolution of a native Lobelia species toward metabolites with greater activity …