Ecology and Evolutionary Biology Commons^™

Age-Related Tick Infestation Patterns In Springtime Migratory Passerines, Matthew Dunning

Honors Theses

To test the hypothesis that younger migrants are more prone to arrive at stopover sites on the northern coast of the Gulf of Mexico with ticks than adult migrants, 2177 migratory passerines were screened for ticks at Gulf Coast sites in Texas and Louisiana. Fifty eight (2.7%) were infested with ticks with 28 (1.3%) being young birds and 30 (1.4%) being adult birds. The body condition of the birds was assessed to determine if tick infestation had negative consequences and if the severity of consequences varied between ages. I found no relationship of age with the prevalence of a tick …

Bottlenose Dolphin (Tursiops Truncatus) Vocal Responses To Sonar And Spectrally Pink Background Noise, Maria Zapetis

Dissertations

As human populations rise, the level of man-made noise increases globally. Naval sonar and boat traffic are underwater sound sources of particular concern to marine mammal welfare. To better understand the impact of these noise increases on cetaceans, studies can explore animals’ behavioral changes in response to noise. Studies have investigated the ‘dose-response’ relationship between the received sound pressure level of sonar signals and the behavior of cetaceans in the wild, but exposure studies in controlled environments are limited. The studies in this dissertation examined bottlenose dolphin vocal modifications during various experimental noise treatments. Acoustic recordings previously obtained for bottlenose …

Global Patterns And Drivers Of Ecosystem Functioning In Rivers And Riparian Zones, Scott D. Tiegs, David M. Costello, Mark W. Isken, Guy Woodward, Peter B. Mcintyre, Mark O. Gessner, Eric Chauvet, Natalie A. Griffiths, Alex S. Flecker, Vicenç Acuña, Ricardo Albariño, Daniel C. Allen, Cecilia Alonso, Patricio Andino, Clay Arango, Jukka Aroviita, Marcus V.M. Barbosa, Leon A. Barmuta, Denise A. Bruesewitz, Francis J. Burdon, Marcos Callisto, Cristina Canhoto, Krista A. Capps, Maria M. Castillo, Joanne Clapcott, Fanny Colas, Checo Checo Colón-Gaud, Julien Cornut, Verónica Crespo-Pérez, Wyatt F. Cross, Joseph M. Culp, Michael Danger, Olivier Dangles, Elvira De Eyto, Alison M. Derry, Veronica Díaz Villanueva, Michael M. Douglas, Arturo Elosegi, Andrea C. Encalada, Sally Entrekin, Rodrigo Espinosa, Diana Ethaiya, Verónica Ferreira, Carmen Ferriol, Kyla M. Flanagan, Tadeusz Fleituch, Jennifer J. Follstad Shah, André Frainer, Nikolai Friberg, Paul C. Frost, Erica A. Garcia, Liliana García Lago, Pavel Ernesto García Soto, Sudeep Ghate, Darren P. Giling, Alan Gilmer, José Franciso Gonçalves Jr., Rosario Karina Gonzales, Manuel A.S. Graça, Mike Grace, Hans-Peter Grossart, François Guérold, Vlad Gulis, Luiz U. Hepp, Scott Higgins, Takuo Hishi, Joseph Huddart, John Hudson, Samantha Imberger, Carlos Iñiguez-Armijos, Tomoya Iwata, David J. Janetski, Eleanor Jennings, Andrea E. Kirkwood, Aaron A. Koning, Sarian Kosten, Kevin A. Kuehn, Hjalmar Laudon, Peter R. Leavitt, Aurea L. Lemes Da Silva, Shawn G. Leroux, Carri J. Leroy, Peter J. Lisi, Richard Mackenzie, Amy M. Marcarelli, Frank O. Masese, Brendan G. Mckie, Adriana Oliveira Medeiros, Kristian Meissner, Marko Miliša, Shailendra Mishra, Yo Miyake, Ashley Moerke, Shorok Mombrikotb, Rob Mooney, Tim Moulton, Timo Muotka, Junjiro N. Negishi, Vinicius Neres-Lima, Mika L. Nieminen, Jorge Nimptsch, Jakub Ondruch, Riku Paavola, Isabel Pardo, Christopher J. Patrick, Edwin T.H.M. Peeters, Jesus Pozo, Catherine Pringle, Aaron Prussian, Estefania Quenta, Antonio Quesada, Brian Reid, John S. Richardson, Anna Rigosi, José Rincón, Geta Rîșnoveanu, Christopher T. Robinson, Lorena Rodríguez-Gallego, Todd V. Royer, James A. Rusak, Anna C. Santamans, Géza B. Selmeczy, Gelas Simiyu, Agnija Skuja, Jerzy Smykla, Kandikere R. Sridhar, Ryan Sponseller, Aaron Stoler, Christopher M. Swan, David Szlag, Franco Teixera-De Mello, Jonathan D. Tonkin, Sari Uusheimo, Allison M. Veach, Sirje Vilbaste, Lena B.M. Vought, Chiao-Ping Wang, Jackon R. Webster, Paul B. Wilson, Stefan Woelfl, Marguerite A. Xenopolous, Adam G. Yates, Chihiro Yoshimura, Catherine M. Yule, Yixin X. Zhang, Jacob A. Zwart

Faculty Publications

River ecosystems receive and process vast quantities of terrestrial organic carbon, the fate of which depends strongly on microbial activity. Variation in and controls of processing rates, however, are poorly characterized at the global scale. In response, we used a peer-sourced research network and a highly standardized carbon processing assay to conduct a global-scale field experiment in greater than 1000 river and riparian sites. We found that Earth’s biomes have distinct carbon processing signatures. Slow processing is evident across latitudes, whereas rapid rates are restricted to lower latitudes. Both the mean rate and variability decline with latitude, suggesting temperature constraints …

Variability In Microphytobenthos Biomass And Carbon Isotopic Values In Shallow Coastal Waters Of The Northern Gulf Of Mexico, Sharil N. Deleon, Jeffrey W. Krause, Ronald Baker

Gulf and Caribbean Research

No abstract provided.

Larsonia Pterophylla (Cnidaria, Pandeidae) Parasitic On Two Leptocephali: Paraconger Sp. (Congridae) And Callechelyini Gen. Sp. (Ophichthidae) In The Gulf Of Mexico, Matthew S. Woodstock, Charles Golightly, Danté Fenolio, Jon A. Moore

Gulf and Caribbean Research

No abstract provided.

Rapid Assessment Of Post-Hurricane Michael Impacts On A Population Of The Sea Urchin Lytechinus Variegatus In Seagrass Beds Of Eagle Harbor, Port Saint Joseph Bay, Florida, Roberta Challener, James B. Mcclintock, Raymond Czaja Jr., Christopher Pomory

Gulf and Caribbean Research

No abstract provided.

The Purr Of The Lionfish: Sound And Behavioral Context Of Wild Lionfish In The Greater Caribbean, Michelle T. Schärer-Umpierre, Carlos Zayas, Richard S. Appeldoorn, Evan Tuohy, Jack C. Olson, Jessica A. Keller, Alejandro Acosta

Gulf and Caribbean Research

Passive acoustic technology has become a useful and cost-effective method to collect data with very high temporal resolution that can be used to detect the presence, distribution, and remotely monitor soniferous marine biodiversity. In order to maximize the potential of bioacoustic and soundscape research in the oceans, understanding the association between the different realms of sound sources, species-specific calls and behavioral context of sound production are fundamental. A previously unknown vocalization was associated with a behavioral display of lionfish (Pterois spp.) by recordings with synchronous audio and video at deep coral reefs in both Puerto Rico and the Florida …

Effect Of Reinforcement Selection On Mate Selection Rates Of Gambusia Affinis And Gambusia Holbrooki, Molly Stephens

Honors Theses

This study was conducted in order to investigate the effects that reinforcement selection has on non-hybridized and hybridized populations of two separate species of Gambusia (G. affinis and G. holbrooki). In order to examine if organisms from a population that had been previously exposed to hybridization would choose mates so as to not produce species hybrid offspring, 29 trials consisting of 9 different mate preference combinations and 87 individuals were recorded and analyzed. Once mate preference was determined for each female used in each trial, the effect that reproductive isolation had on reinforcement in hybrid zones was analyzed. The results …

Coastal Wetland Dynamics Under Sea-Level Rise And Wetland Restoration In The Northern Gulf Of Mexico Using Bayesian Multilevel Models And A Web Tool, Tyler Hardy

Master's Theses

There is currently a lack of modeling framework to predict how relative sea-level rise (SLR), combined with restoration activities, affects landscapes of coastal wetlands with uncertainties accounted for at the entire northern Gulf of Mexico (NGOM). I developed such a modeling framework – Bayesian multi-level models to study the spatial pattern of wetland loss in the NGOM, driven by relative RSLR, vegetation productivity, tidal range, coastal slope, and wave height – all interacting with river-borne sediment availability, indicated by hydrological regimes. These interactions have not been comprehensively investigated before. I further modified this model to assess the efficacy of restoration …

The Role And Contribution Of Saprotrophic Fungi During Standing Litter Decomposition Of Two Perennial Grass Species, Schizachyrium Scoparium And Schizachyrium Tenerum, Matthew Lodato

Master's Theses

In terrestrial ecosystems, most of the plant biomass produced enters the detrital pool, where microbial decomposers colonize, enzymatically degrade, and assimilate plant litter carbon and nutrients in amounts sufficient to bring about the decomposition of plant litter. Here, I estimated the biomass and production of fungi and microbial respiration associated with decaying Schizachyrium scoparium and Schizachyrium tenerum leaf litter, and constructed a partial organic matter budget estimating C flow into and through fungal decomposers. Significant losses in S. scoparium (57%) and S. tenerum (68%) leaf mass was observed during litter decomposition along with concomitant increases in fungal biomass, which reached …

Linkages Between Marsh Fragmentation, Prey Availability, And Blue Crab (Callinectes Sapidus) Abundance And Mortality, Lennah Shakeri

Master's Theses

Coastal marshes are important nursery habitats for many commercially important invertebrate species, yet these marshes are being lost worldwide at an unprecedented rate due to subsidence, erosion, climate change, and human activity. As marsh is lost, it creates the opportunity for submerged aquatic vegetation (SAV) colonization and establishment in newly created open water areas. Blue crabs, Callinectes sapidus, use both marsh edge and SAV habitat during the juvenile stages and support one of the largest fisheries in the Gulf of Mexico, worth over $70 million in 2015. This thesis studied the linkages between habitat type, SAV cover, benthic prey …

Spatial Variation In Basal Resources And Trophic Position Of Selected Fishes Of The North-Central Gulf Of Mexico, Christopher Fleming

Master's Theses

The North-central Gulf of Mexico is a complex hydrologic environment with freshwater influx that varies on spatial and temporal scales. Freshwater input exerts influence on the isotope values of organisms living in coastal ecosystems. The objectives of this study were to determine relationships between total length and isotope value, estimate basal resource usage and trophic position of target species from Mississippi Sound, reef, and pelagic environments, and identify differences and similarities in spatial patterns of collection. Muscle tissue samples were collected from October 2014 through September 2015. Stable isotope analysis identified a trophic gradient extending from nearshore to offshore, with …

Root Dynamics Of Crop Plants In A High Carbon Dioxide World: Effects Of Elevated Versus Ambient Carbon Dioxide Levels And No-Till Versus Conventional Agricultural Management, Charlotte Barker

Dissertations

Due to the continuing increases is atmospheric carbon dioxide levels and its potential effect on food sources, there is an interest in evaluating the effect of elevated CO₂ concentration versus ambient CO₂ concentration in agricultural crop plants although more studies have focused on the aboveground portions of plants rather than the roots. Additionally, the conservation agricultural method, no-till, has been widely suggested as a possible method of increasing soil organic carbon and increasing soil moisture in a hotter world.

This research involves two major agricultural plants, Sorghum bicolor (sorghum), and Glycine max (soybean) grown under four conditions including …

Personality In California Sea Lions (Zalophus Californianus) And Harbor Seals (Phoca Vitulina): Methodological Convergence And Species-Specific Emotional Repertoires, Amber De Vere

Dissertations

Despite the wide acceptance of animal personality as a valid area of study, research on marine mammal personality remains remarkably scarce. What literature does exist predominantly focuses on bottlenose dolphins (Frick, 2016; Highfill & Kuczaj, 2007; Kuczaj, Highfill & Byerly, 2012; Lilley, de Vere, Yeatre & Kuczaj, 2018; Moreno, Highfill & Kuczaj, 2017). There is also strong evidence for individual differences in grey seals (Robinson et al., 2015; Twiss & Franklin, 2010; Twiss, Culloch & Pomeroy, 2011; Twiss, Cairns, Culloch, Richards & Pomeroy, 2012), and preliminary research has provided evidence of broad personality factors in pinniped species using behavioral coding …

Factors Affecting The Regrowth Of Ilex Glabra In A Routinely Burned Longleaf Forest, Jaybus Price

Master's Theses

This study examines the effects of historical management by use of prescribed fire on Ilex glabra stems/m² and factors affecting the regrowth of I. glabra after a prescribed burn to gain beneficial knowledge for management purposes. Environmental factors and morphological parameters of I. glabra were sampled before and after a prescribed burn of the Longleaf Trace Nature Preserve in September 2016. The study site is located in Lamar County, Mississippi, just west of Hattiesburg, MS. Stem densities of I. glabra were collected once before the prescribed burn and twice after the prescribed burn at 2 month and 9 month …

Life-History Characteristics And Fishery Dynamics Of Red Drum (Sciaenops Ocellatus), In The North-Central Gulf Of Mexico, Corbin Bennetts

Master's Theses

Red Drum (Sciaenops ocellatus) are highly targeted recreationally in the Gulf of Mexico, and support a small commercial fishery in Mississippi. Despite their popularity, the stock is assessed using data limited approaches that necessitate accurate life history information. I estimated the year-specific and year-aggregated escapement rates for the Mississippi stock (years 2004 to 2015), which were sensitive to mortality estimation methods; year-aggregated estimates were 6.9 to 28.2 % depending on the method, but temporal patterns were consistent. I then addressed concerns with previously estimated life-history characteristics by describing the sex-specific growth and reproductive dynamics. The three-parameter von Bertalanffy …

The Influence Of Conservation Tillage And Conventional Tillage On Soil Bacterial Diversity In Southern Illinois, Nasser Syed

Dissertations

Agriculture in the Midwest United States (Illinois, Indiana, Iowa, Michigan, Minnesota, Ohio, and Wisconsin) is a critically important component of the United States economy and also for world exports of food grain. This is well reflected in the 2012 Census of Agriculture which showed that these states had a market value of crop and livestock products sold in excess of $80,000,000,000 (USDA, 2012). Within the U.S. the three Midwest states, Illinois, Iowa, and Minnesota are ranked 2nd, 3rd, and 4th for the economic value of crops sold. This economic value of agriculture in the Midwest encompasses not only corn, soybeans, …

Sibship Reconstruction For Inferring The Number Of Breeders Of Gulf Sturgeon In The Apalachicola River, Robbilyn Verges

Honors Theses

The Gulf sturgeon is an anadromous fish that inhabits the Gulf of Mexico and its neighboring river drainages. The species is currently listed as threatened due to habitat alterations and overfishing. In this study, we focused on the Apalachicola River in Florida, which has had several historic spawning locations of the sturgeon blocked by the Jim Woodruff Lock and Dam. Age-1 juvenile sturgeon from the year 2013 (n=31) and 2014 (n=131) were genotyped using fourteen microsatellite loci. Sibship reconstruction and parentage assignment was performed in order to determine the effective number of breeders (Nb) and the total number of spawning …

Genetic Estimates Of The Number Of Breeding Adults In Alligator Gar From The Choke Canyon Reservoir, Texas, E. Blayne Newsome

Honors Theses

Alligator gar were historically found across the coastal drainages of the Gulf of Mexico and up into the Mississippi River basin. However, their populations are experiencing decline in many portions of their range. Texas seems to have large populations of alligator gar, but state resource officers are seeking to better understand its biology so as to provide appropriate management recommendations to maintain the recreational fishery. In this study, I used genetic techniques to examine a cohort of 144 juvenile alligator gar collected in 2016 in the Choke Canyon Reservoir. By estimating the effective number of breeders and number of spawning …

Temporal Migration Patterns Between Natal Locations Of Ruby-Throated Hummingbirds (Archilochus Colubris) And Their Gulf Coast Stopover Site, Theodore J. Zenzal Jr., Andrea J. Contina, Jeffrey F. Kelly, Frank R. Moore

Faculty Publications

Background

Autumn latitudinal migrations generally exhibit one of two different temporal migration patterns: type 1 where southern populations migrate south before northern populations, or type 2 where northern populations overtake southern populations en route. The ruby-throated hummingbird (Archilochus colubris) is a species with an expansive breeding range, which allows opportunities to examine variation in the timing of migration. Our objective was to determine a relationship between natal origin of ruby-throated hummingbirds and arrival at a Gulf coast stopover site; and if so, what factors, such as differences in body size across the range as well as the …

Clarifying The Range Of The Endangered Largetooth Sawfish In The United States, Jason C. Seitz, John D. Waters

Gulf and Caribbean Research

The United States population of the endangered Largetooth Sawfish (Pristis pristis) has a high probability of extinction. It is critical to identify areas with valid historical records as these areas may be important to the recovery of the species. The U.S. range is reported to extend as far east as Florida based on one vouchered specimen and 3 historical records from this state. Three of these reports presume a local capture location despite a lack of locality data. The vouchered specimen was presumed captured in southern Florida, but evidence suggests otherwise. Dried specimens observed in Florida were most likely imported …

Description Of A New Sound Produced By Nassau Grouper At Spawning Aggregation Sites, Timothy J. Rowell, Michelle T. Schärer, Richard S. Appeldoorn

Gulf and Caribbean Research

This study identified a new sound produced by Nassau Grouper in association with, although potentially not exclusive to, an agonistic interaction at a spawning aggregation. We have also provided a behavioral and acoustic description for identification of this sound in future studies. The discovery of a third type of sound produced by Nassau Grouper further highlights the importance of acoustic communication coupled with visual displays in fishes. Furthermore, identification of a new sound increases the ability to document the presence of this endangered species at spawning sites. Future efforts may reveal that the sound is produced within additional behavioral contexts …

Effects Of Trophic Relationships On Oyster Reef Restoration Success In The Mississippi Sound, Virginia Robin Fleer

Dissertations

Natural and anthropogenic changes resulting from altered hydrology, hurricanes, variable precipitation, and the BP oil spill have all taken their toll on oyster reefs in Mississippi. In response, oyster reef restoration efforts are currently underway within the Northern Gulf of Mexico. In order to understand why these efforts succeed or fail, it is crucial to consider predator-prey relationships within the context of the trophic dynamics of oyster reefs. Thus, for this dissertation study I integrated a multidisciplinary approach to understanding key trophic interactions affecting oyster recruitment, growth and survival, comprising field sampling, manipulative lab experiments, and individual-based modeling. Spat settlement …

Historical Change Of Seagrasses In The Mississippi And Chandeleur Sounds, Linh Thuy Pham

Dissertations

Seagrasses are important coastal resources facing numerous stressors, and losses have been documented from local to global assessments. Under the broad theme of habitat loss and fragmentation, a study of historical change in total area and landscape configuration of seagrasses in the Mississippi and Chandeleur Sounds was conducted. Mapping data was collated from a multitude of previous projects from 1940 to 2011.

Comparisons of seagrass area among various studies that used different mapping methods can result in overestimation of area change and misleading conclusions of change over time. The vegetated seagrass area (VSA) data were generalized to a common resolution …

Effects Of Temperature On Growth And Molting In Blue Crabs (Callinectes Sapidus) And Lesser Blue Crabs (Callinectes Similis), Abigail Ann Kuhn

Master's Theses

Temperature can exert impacts on many processes in ectotherms. With global temperatures rising due to climate change, many ectothermic species may exhibit changes in growth rates and size at maturity, and these changes can have population-level effects. Predicting responses of species to climate change will require not only knowledge of thermal tolerance limits, but also effects of temperature change on growth rates and other life history parameters. For arthropods that exhibit discontinuous growth (i.e., molting), this includes both intermolt period and growth per molt. Previous laboratory and field experiments suggest that temperature affects both intermolt period (IMP) and growth per …

Salinity Tolerance Of Gambusia Affinis, Sarah Rubelowsky

Honors Theses

Developmental plasticity refers to changes during development as a result of environmental contributions. Salinity is a varying environmental condition in freshwater and estuarine habitats that can mediate developmental plasticity in Gambusia affinis, which can increase their tolerances as an invasive species. For my study, estuarine and freshwater populations of Gambusia affinis were sampled in March of 2017 using dip nets. Both populations were then brought back to the laboratory where pregnant females were acclimated to three different salinities (0‰, 15‰, 25‰) until they gave birth. I predicted that the estuarine population of Gambusia affinis would have a greater salinity tolerance …

Ecological And Oceanographic Influences On Leatherback Turtle Behavior And Scyphozoan Jellyfish Distributions In The Gulf Of Mexico, Katrina Aleksa

Dissertations

Leatherback turtles (Dermochelys coriacea) are a wide-ranging, oceanic species that feed exclusively on gelatinous zooplankton. Leatherback have been spotted in the Gulf of Mexico (GoM) for several decades and consistently had a high level of interactions with longline fisheries. However, no quantitative studies have been performed to address the spatiotemporal distribution of these turtles in the GoM. This research determines 1) leatherback movements and high-use areas in the GoM, 2) their association with oceanographic features, 3) the distribution and density of two abundant medusae in the northern GoM and any association with biophysical parameters, and 4) the body …

Escorting Of Mother-Calf Pairs Of Humpback Whales (Megaptera Novaeangliae) In The Colombian Pacific During The Breeding Season, Natalia Botero Acosta

Dissertations

Humpback whales (Megaptera novaeangliae) belonging to the “breeding G-stock” annually migrate from the Antarctic Peninsula and southern Chile to the southeastern Pacific to reproduce. Associations between mother-calf pairs and escorts were examined in the Gulf of Tribugá, northern Colombian Pacific, using photo-identification and behavioral/spatial sampling. Research hypotheses included: 1. The association between cows and escorts is short-lived, consistent with a male reproductive strategy, 2. The presence of escort(s) elicits a behavioral response from mother-calf pairs and, 3. The patterns of spatial distribution reflect the spatial segregation of maternal females. Groups were classified as mother-calf pairs (Mc), mother, calf …

Morphological, Genetic, And Environmental Characterization Of An Unusual Population Of Isoetes (Isoetaceae, Lycopodiophyta), Shannon L. Walker

Honors Theses

A large and unusual population of Isoetes (Isoetaceae, Lycopodiophyta) in the DeSoto National Forest, Wayne County, Mississippi, was studied to determine if the individuals there represent a new species or if they represent part of the variation of the one primary species of the longleaf pine belt of Mississippi, Isoetes louisianensis, which it most closely resembles. The unusual population and specimens of known Isoetes louisianensis were examined comparatively based on morphology, megaspore ornamentation, examination of habitat characteristics, and phylogenetic analysis of DNA sequence data from the nuclear internal transcribed spacer 1 and 2 (ITS) and the 5.8S ribosomal gene. No …

Thresholds Of Sea-Level Rise Rate And Sea-Level Rise Acceleration Rate In A Vulnerable Coastal Wetland, Wei Wu, Patrick D. Biber, Matthew Bethel

Understanding the Trajectory of Mississippi Coastal Salt Marsh Structure Function, and Processes in the face of Sea Level Rise: Data and Information Repository

Feedbacks among inundation, sediment trapping, and vegetation productivity help maintain coastal wetlands facing sea-level rise (SLR). However, when the SLR rate exceeds a threshold, coastal wetlands can collapse. Understanding the threshold helps address key challenges in ecology—nonlinear response of ecosystems to environmental change, promotes communication between ecologists and resource managers, and facilitates decision-making in climate change policies. We studied the threshold of SLR rate and developed a new threshold of SLR acceleration rate on sustainability of coastal wetlands as SLR is likely to accelerate due to enhanced anthropogenic forces. Deriving these two thresholds depends on the temporal scale, the interaction …