Ecology and Evolutionary Biology Commons^™

Latitudinal Variation In Thermal Tolerance And Preference Of Fundulus Notatus And F. Olivaceus: Implications For Temperature Mediated Reproductive Isolation, Laura Kristin Stewart

Master's Theses

Temperature is one of the most pervasive and influential abiotic factors affecting the life histories of fish, regulating a host of physiological processes and influencing behavioral thermoregulation. Fundulus notatus, the blackstripe topminnow, and F. olivaceus, the blackspotted topminnow, are widely distributed species located in drainages along the northern part of Gulf of Mexico (30°N latitude) and as far north as southern Illinois (39°N latitude). However, F. notatus has a much broader range reaching up into the Great Lakes (43°N latitude). Due to their broad geographical range, these populations inhabit a wide range of thermal regimes, thus …

Habitat Selection Of Gulf-Strain Striped Bass, Morone Saxatilis: Relationships To Dynamic Abiotic Environmental Characteristics Within The Biloxi River, Mississippi, Jennifer Lynne Green

Master's Theses

The purpose of this project was to provide insights about the short- and long-term patterns of habitat selection of Gulf-strain Striped Bass, Morone saxatilis, based on spatially and seasonally variable abiotic environmental characteristics (water temperature, dissolved oxygen (DO), salinity, specific conductivity, and pH) in the Biloxi River, MS system. Juvenile hatchery-reared and feral adult Gulf-strain Striped Bass were acoustically-tagged and continuously monitored via active and passive telemetry from November 2012 – June 2014. Each month the available abiotic environmental characteristics of 40 random locations within the Biloxi River, along with sub-habitat conditions occupied by acoustically-tagged Gulf-strain Striped Bass, were …

Observations On The Life History Of The Bayou Killifish, Fundulus Pulvereus (Everman 1899) In Mississippi Tidal Marshes, Leah Corrine Gaines

Master's Theses

This study provides insight into the life history of the relatively unknown intertidal marsh fish Fundulus pulvereus (Everman), the bayou killifish. Monthly sampling for F. pulvereus took place in three different Mississippi tidal marshes over a period of 17 months (n=445). Observations on the diet, parasite fauna, and fecundity of the bayou killifish were documented on all specimens collected. Percent Occurrence and Percent Number coupled along with multivariate analyses indicated seasonal, site, and ontogenetic shifts in the diet of F. pulvereus. Dominant prey items consumed by F. pulvereus were copepods, mites, chironomids, and terrestrial and aquatic insects. The bayou …

Effects Of Pre-Release Physical Stressors On Post-Release Success Of Hatchery-Reared Spotted Seatrout, Taylor Westbrook Guest

Master's Theses

Alteration of habitat associated with coastal development and increased demand for food and recreation can result in the depletion of fisheries resources such as the Spotted Seatrout (Cynoscion nebulosus), the Gulf of Mexico’s most popular recreational fish. Stock enhancement, or the release of cultured fish to supplement wild populations, is one potential tool for managing important fisheries resources. Although much effort has gone into marine stock enhancement, the effectiveness of stocking is not well established, and techniques for ensuring success have not been developed. Although the basic biology of the Spotted Seatrout is well known, comparatively little is known about …

Species Delimitation, Phylogenetics, And Biogeography Of The Catfish Genus Rhamdia Bleeker (Heptapteridae) Of Central America And The Trans-Andean Region Of Colombia, Carmen Liliana Hernández Torres

Dissertations

A recent taxonomic revision of the Neotropical catfish genus Rhamdia (Pisces: Siluriformes: Heptapteridae) reduced a number of described species to synonymy, especially under a broadly circumscribed R. quelen. Evidence is presented here from DNA sequence data, external and internal morphology, and morphometrics that argues for the recognition of R. guatemalensis in Central and northern South America and R. saijaensis and R. cinerascens in the Pacific drainages of Colombia and Ecuador, respectively. The DNA data indicate that all trans-Andean samples form a monophyletic group, within which there are separate clades corresponding to R. laticauda and the synonymized R. guatemalensis, …

The Evolution Of Body Size In The Order Siluriformes, D Cooper Campbell

Honors Theses

The evolution of body size has long been a topic of interest to biologists due to the close link between size and various aspects of an organism’s biology. Adult body size is influenced by the underlying tradeoff in energy allocation between maintenance, somatic growth and reproduction. I studied the evolution of a large group of globally distributed (primarily freshwater with some marine forms) fishes to test some basic hypotheses about the evolution of adult body size. Catfish (Siluriformes) are an excellent group for this type of research as they represent approximately 11% of fishes and species range in size from …

Movement Of Bigmouth Sleeper, Gobiomorus Dormitor, In The Río Cañas, Puerto Rico, Revealed By Radio Telemetry, And A Discussion Of The Species’ Amphidromous Characterization, Steve E. Lochmann, Christine Adelsberger, J. Wesley Neal

Gulf and Caribbean Research

Bigmouth Sleeper, Gobiomorus dormitor, are tropical fish native to rivers of Puerto Rico. They are popular sport fish targeted by local anglers. They are considered as diadromous, but this characterization is controversial. The displacement of Bigmouth Sleepers in the Río Cañas, Puerto Rico, was examined using radio telemetry. Twenty fish were radio-tagged and monitored from January to November 2008. Fish were in the Río Cañas 69%, 62%, and 59% of the time before (January-May), during (June-August), and after (September-November) the spawning season, respectively. Average detected linear home range (within the river) for all tracking periods was 2.3 km, but …

A Phenological Study Of Bat Communities In Southern Mississippi Caves, Zachary Uriah Roth

Master's Theses

Mississippi is generally not known for its caves, and consequently its cave flora and fauna remain largely unstudied. From fall 2010 to winter 2013, we studied the bat populations in the three largest caves in Mississippi. The most common (and only) species found in these caves were Myotis austroriparius and Perimyotis subflavus. I collected monthly data on the number of bats per species, behaviors and locations of the bats within the caves, as well as atmospheric data at selected positions within each cave. All three caves were found to have significant temperature differences between seasons (winterPerimyotis subflavus was found …

The Conservation Genetics Of Two Emydid Turtles: Emydoidea Blandingii And Malaclemys Terrapin, Charlotte Lizana Petre

Master's Theses

Conservation of turtles is complicated by their sensitivity to habitat degradation and overexploitation. I used microsatellites and standard population genetic analyses to explore genetic diversity, population structure, paternity and demographic history in two emydid turtles that are currently experiencing threats to their survival. The Blanding’s turtle, Emydoidea blandingii, has experienced habitat fragmentation throughout its range, and this study focuses on a population in Massachusetts where hatchlings from one population are being translocated to establish a new population. I found evidence of multiple paternity within clutches and found no significant reduction in genetic diversity when comparing the source population and …

A Description Of Vocalizations And Their Association With Mouthing Behaviors And Social Context In Bottlenose Dolphins, Tursiops Truncatus, Christina Elyse Perazio

Master's Theses

Dolphin communication is multimodal and incorporates physical behaviors and vocalizations. Dolphins often exchange information with conspecifics using different types of vocalizations, and these vocalizations are sometimes associated with specific behaviors. However, the relationship of vocalization type and mouthing behavior type has not been investigated. This thesis examines simultaneous acoustic and visual recordings of bottlenose dolphins (Tursiops truncatus) to determine the relationship between type of mouthing behavior and type of vocalization (whistle, whistle-squawk, chirp, moan, burst-pulse type A, burst-pulse type B, and click trains). The role of the social context of a mouthing behavior is also evaluated. Data were obtained opportunistically …

Effects Of Water Parameters On Container Mosquito (Diptera: Culicidae) Oviposition And Performance, Stephanie Sue Schelble

Master's Theses

Water body parameters have a considerable effect on the communities that develop within them. In small container habitats like tires, the depth, surface area, and volume effect the development and success of the mosquito communities. This study investigated the choices of the adult female mosquitoes, Aedes albopictus and Culex quinquefasciatus, between different depths and surface areas. In addition, larval performance was determined under differing depth and larvae densities. Oviposition studies showed that Ae. albopictus had a preference for deeper habitats (χ²= 14.2902, p= 0.0139) but did not prefer any surface areas (χ²= 7.2321, p= 0.0649) though …

Gelatinous Zooplankton Biomass In The Global Oceans: Geographic Variation And Environmental Drivers, Cathy H. Lucas, Daniel O.B. Jones, Catherine J. Hollyhead, Robert H. Condon, Carlos M. Duarte, William M. Graham, Kelly L. Robinson, Kylie A. Pitt, Mark Schildhauer, Jim Regetz

Faculty Publications

Aim

Scientific debate regarding the future trends, and subsequent ecological, biogeochemical and societal impacts, of gelatinous zooplankton (GZ) in a changing ocean is hampered by lack of a global baseline and an understanding of the causes of biogeographic patterns. We address this by using a new global database of GZ records to test hypotheses relating to environmental drivers of biogeographic variation in the multidecadal baseline of epipelagic GZ biomass in the world's oceans.

Location

Global oceans.

Methods

Over 476,000 global GZ data and metadata items were assembled from a variety of published and unpublished sources. From this, a total of …

El Niño-Southern Oscillation Is Linked To Decreased Energetic Condition In Long-Distance Migrants, Kristina Paxton, Emily B. Cohen, Zoltán Németh, Frank R. Moore

Faculty Publications

Predicting how migratory animals respond to changing climatic conditions requires knowledge of how climatic events affect each phase of the annual cycle and how those effects carry-over to subsequent phases. We utilized a 17-year migration dataset to examine how El Niño-Southern Oscillation climatic events in geographically different regions of the Western hemisphere carry-over to impact the stopover biology of several intercontinental migratory bird species. We found that migratory birds that over-wintered in South America experienced significantly drier environments during El Niño years, as reflected by reduced Normalized Difference Vegetation Index (NDVI) values, and arrived at stopover sites in reduced energetic …

Population Genetics And Microbial Communities Of The Gopher Tortoise (Gopherus Polyphemus), Daniel Lyle Gaillard

Dissertations

The gopher tortoise, Gopherus polyphemus, is an endangered species living in the southeastern United States. The recent and drastic decline in tortoise numbers has resulted in a multi-faceted approach to conserve this species. I used a population genetic approach to determine the population structure, genetic diversity and barriers to gene flow at a broad, regional and local scale. Tortoises are divided into five distinct genetic populations at the broad scale, the central populations have the highest levels of genetic diversity and the Tombigbee, Mobile, Apalachicola, Suwannee and St. John’s Rivers appear to be barriers to gene flow. At the regional …

The Delivery, Speciation, And Fate Of Trace Elements In St. Louis Bay, Mississippi, Gopal Bera

Dissertations

Estuaries are dynamic regions in which there can be significant modification of the riverine flux of trace elements to the open ocean due to various geochemical, physical, and biological processes. Additionally, estuaries are often subject to anthropogenic inputs of trace elements. The first portion of this study investigated the source, behavior, and sediment interaction of anthropogenic stable cesium (Cs) in St. Louis Bay (SLB), MS. A consistent increase in stable Cs concentration was noticed in sediment cores starting from a period when a titanium dioxide refinery on SLB started operations. Weak correlation between Cs and clay percentage and strong correlations …

Biogeochemistry Of Trace Elements In The Mixing Zone Of The Mississippi And Atchafalaya Rivers And Chemical Distributions As Affected By The Deepwater Horizon Blowout, Dongjoo Joung

Dissertations

Selected trace elements (TEs), dissolved organic carbon, and nutrients were studied in Louisiana Shelf waters including the Mississippi (MR) and Atchafalaya (AR) River plumes during periods of high, intermediate, and low river discharges. Seasonal variations in TEs were observed at low salinity, reflecting seasonal changes in the river water endmembers. Shelf surface water dissolved Mo, Cs, U, Ni, and Cu showed conservative behavior with minor scattering in some high salinity waters. Based on associated mixing experiments, nutrient and chlorophyll distributions, as well as surface-bottom concentration contrasts, the non-conservative behavior of TEs was variously related to colloidal flocculation (Fe, Cr), biological …

Marine Fungi Of U.S. Gulf Of Mexico Barrier Island Beaches: Biodiversity And Sampling Strategy, Allison Kathleen Walker

Dissertations

Marine fungi are an important but often overlooked component of marine ecosystems. Primarily saprotrophic, they are vital to coastal nutrient cycling processes and food webs. However, basic marine fungal distribution data are lacking in many parts of the world, as is knowledge of the sampling intensity required to characterize the biodiversity of these communities. The roles of substrate, season and latitude in shaping intertidal ascomycete community structure were examined for the U.S. Gulf of Mexico, and the role of sampling frequency on species richness estimates was also addressed. Best sampling practices were developed and 750 collections of beach detritus, sand …

Survival, Growth And Reproduction Of Non-Native Nile Tilapia Ii: Fundamental Niche Projections And Invasion Potential In The Northern Gulf Of Mexico, Michael R. Lowe, Wei Wu, Mark S. Peterson, Nancy J. Brown-Peterson, William T. Slack, Pamela J. Schofield

Faculty Publications

Understanding the fundamental niche of invasive species facilitates our ability to predict both dispersal patterns and invasion success and therefore provides the basis for better-informed conservation and management policies. Here we focus on Nile tilapia (Oreochromis niloticus Linnaeus, 1758), one of the most widely cultured fish worldwide and a species that has escaped local aquaculture facilities to become established in a coastal-draining river in Mississippi (northern Gulf of Mexico). Using empirical physiological data, logistic regression models were developed to predict the probabilities of Nile tilapia survival, growth, and reproduction at different combinations of temperature (14 and 30°C) and salinity …

Concurrent Effects Of Resource Pulse Amount, Type, And Frequency On Community And Population Properties Of Consumers In Detritus-Based Systems, Donald A. Yee, Steven A. Juliano

Faculty Publications

Episodic resource inputs (i.e., pulses) can affect food web properties and community dynamics, but detailed mechanistic understanding of such effects remain elusive. Natural aquatic microsystems (e.g., tree holes, human-made containers) are colonized by invertebrates that form complex food webs dependent on episodic and sometimes sizeable inputs of allochthonous detritus from adjacent terrestrial environments. We investigated how variation in pulse frequency, amount, and resource type interacted to affect richness, abundance, composition, and population sizes of colonizing invertebrates in water-filled tires and tree hole analogs in a forest habitat. Different container types were used to assess the generality of effects across two …

Genetic Variation In Potentially Virulent Vibrio Parahaemolyticus From The Northern Gulf Of Mexico, Nicholas Felix Noriea Iii

Dissertations

Vibrio parahaemolyticus (V_p) is a gram-negative bacterium found naturally in marine and estuarine environments. V_p is found in oysters including those which are later consumed by the public. Sub-populations of potentially virulent Vp contain specific virulence factors and are relevant human pathogens capable of causing gastroenteritis, wound infection, and death. The tdh and trh genes, both encoding hemolysins, have been correlated with the majority of clinical V_p isolates but have not been shown to be the definitive virulence factors.

A total of 146 V_p isolates from the northern Gulf of Mexico were collected and probed …

Effects Of Hypoxia And 4-Tert-Octylphenol On Gene Expression Profiles Of The Sheepshead Minnow (Cyprinodon Variegatus), Arthur Alan Karels

Dissertations

Hypoxia occurs in estuaries of northern Gulf of Mexico and world-wide, with increasing frequency/severity via eutrophication and anthropogenic influences. Hypoxia inducible factors (HIFs) form transcriptional complex and bind DNA at hypoxia responsive elements (HREs) in promoter regions of genes needed for systemic and cellular adaptation of fish to low dissolved oxygen (hypoxia, DO <2.0 mg/ml). Hypoxia-induced activation of HIF-αs can lead to a cascade of downstream activation, such as erythropoietin (EPO). Return to normal DO levels (normoxia), prolyl hydroxylases (PHDs) are activated to degrade HIF-αs back to baseline. Fish are affected by environmental estrogen mimics, like 4-tert-octylphenol (4tOP), binding estrogen receptor alpha (ERα) at estrogen responsive elements (EREs) and activating genes vitellogenin (VTG). Previous research showed overlap or crosstalk between these two mechanistic pathways. Hypoxia triggers unknown factors regulating ERE-mediated ERα signaling pathway, and stressor combinations could increase/decrease hypoxic or endocrine pathway. Research examined molecular/physiological effects of hypoxia (acute and chronic, moderate and severe) and 4tOP (~60μg/L)on adult male and/or female sheepshead minnow (Cyprinodon variegatus). Three genes identified, cloned, and sequenced (HIF-1α, HIF-2α, and PHD3), plus previously identified genes EPO and VTG, were examined in liver/testes exposed to hypoxia and/or 4tOP for cellular/physiological changes. Endpoints examined included mRNA expression from real-time PCR of HIF-1α, HIF-2α, PHD3, EPO, and VTG using cDNA from total RNA extracts, and microarray analyses of genes expressed during the transition from hypoxia back to normoxia. Phylogenetic analyses confirmed isolation of two HIF-α isofoms (HIF-1α and HIF-2α) and the PHD3 isoform. Significant up-regulation of PHD3 occurred within 10 hrs of chronic hypoxia, and persisted when severe (1.5 mg/L) and declined when moderate (~2.5mg/L). Significant up-regulation of HIF-1α and EPO occurred within 30 minutes to 2 hours of onset of acute severe and very severe (~1.08mg/L) hypoxia. Hypoxia acted similar to an estrogen mimic, with huge up-regulation of VTG gene expression in males, and increased VTG levels (additive effect) when hypoxia was combined with 4tOP. Microarray analyses showed 125 genes with significant transcriptional change, with up- or down-regulation from transitions of: (1) hypoxia (72 hrs) to normoxia (74 hrs) and (2) hypoxia+4tOP (72 hrs) to normoxia+4tOP (74 hrs).

Movement Ecology Of An Intercontinental Migratory Bird During Spring Stopover, Emily Beth Cohen

Dissertations

Movement ecology is a component of nearly all aspects of animal behavior and an animal’s decision to move is likely influenced by a complex combination of exogenous and endogenous factors. Therefore, an examination of the causes and consequences of organismal movement provides a conceptual framework for understanding complex behavioral strategies. My dissertation research is focused on the movement ecology of an intercontinental migratory songbird during spring migration. I adopted experimental approaches to study the factors influencing how a songbird migrant, red-eyed vireos (Vireo olivaceus), makes decisions in unfamiliar landscapes from the initiation of spring stopover.

I simulated the …

Mycorrhizal Colonization Of Native Salt Marsh Plants On Mississippi's Gulf Coast And The Effects Of Commercial Mycorrhizal Inoculants On Nursery-Grown Plants, Kathryn Rondot Mcbride

Master's Theses

Salt marshes are important economically and ecologically to the Gulf Coast and other coasts worldwide. Due to human activities, many coastal salt marshes have been degraded or destroyed. Restoration efforts, through the replacement or addition of naturally occurring salt marsh plants, are taking place worldwide. Most restoration plants are raised in nurseries and are not ready for transfer to restoration sites for eight or nine months. Once the plants are at the restoration site many die due to transplant stress. Arbuscular Mycorrhizal Fungi (AMF) may be able to shorten the time the restoration plants need to stay in the nursery …

An Analytical Study Of Air-Sea Co2 Gas Exchange In The Northwest Mississippi Bight Region, Andrea Kathryn Braatz

Master's Theses

With the continued increase of carbon dioxide (CO2) emissions, researchers are concerned with accumulation of excess CO2 within the atmosphere. The ocean is an important sink for the drawdown of atmospheric CO2 concentrations. Due to high spatial and temporal variability, CO2 fluxes in the coastal ocean are not as well characterized as those for the open ocean. More specifically, data for the northern Gulf of Mexico (GOM) coastal region is lacking. A time series analysis of air-sea CO2 flux rates from May through December 2009 was conducted using data collected by The University of Southern Mississippi’s Central Gulf Ocean Observing …

Dissolved And Colloidal Element Transport Through The Coastal Transition Zone, Moo Joon Shim

Dissertations

There are several factors (e.g., hurricanes, floodplain, and anthropogenic sources) that could modify trace element behavior through the coastal transition zone (CTZ). However, there is still a lack of information about these variables in affecting trace elements in the CTZ. For this study, water samples were collected in the Pearl River (PR), Bay of St. Louis (BSL), and the Mississippi River plume to study the effects of these factors on trace element.

A possible effect of Hurricane Katrina on water quality was examined in the East Pearl River (EPR). Hurricane Katrina could have resulted in increased inputs of organic matter …

Geological And Ichthyological Investigations Into Palaeodrainage Hypothesis For The Tennessee River, Andrea Karen Persons

Dissertations

The course of the ancestral Tennessee River has been debated in both the geological and biological literature for over 100 years. Several of the proposed courses for the ancestral Tennessee place its course across the state of Mississippi. Geochemical analysis of sedimentary rocks in the Pascagoula River basin supports these hypotheses suggesting that the rocks in the Pascagoula basin were derived from the Highland Rim of Tennessee and northern Alabama, while geochemical analysis of rocks from the Pearl River basin point to deposition from a mixture of sources including the ancestral Mississippi River and perhaps the ancestral Tennessee. To delve …

Conservation And Ecology Of The Yellow-Blotched Sawback (Graptemys Flavmaculata), William Winsyl Selman Ii

Dissertations

The role of species conservation is becoming increasingly important due to the mounting pressures from humans on habitats and populations of organisms. This is particularly evident in riverine ecosystems throughout the world where the human demand for freshwater resources is increasing, and consequently, the number of imperiled aquatic organisms is also growing. The seven chapters of this dissertation primarily focus on the Yellow-blotched Sawback, Graptemys flavimaculata, an endangered riverine turtle that is endemic to the Pascagoula River system of southeast Mississippi, USA. At the population level, we aimed to study the impacts of Hurricane Katrina on two study populations within …

Determining The Relationship Of Human Enteric Viruses In Clinical, Wastewater, And Environmental Samples Utilizing Molecular And Cell Culture Techniques, Jacquelina Susann Williams Woods

Dissertations

This study was the first to examine five significant enteric viruses in human fecal material, sewage, and oysters to show a genetic relationship between human enteric viruses and different sample matrices. Fecal samples were collected from an area hospital and examined for norovirus genotype I (NoV GI), norovirus genotype II (NoV Gil), hepatitis A virus (HA V), adenovirus (ADV), and enteroviruses. During this study, sewage samples were collected from a Waster Water Treatment Plant (WWTP) in Mobile, ALand oyster sentinels were placed at 0.1 nautical miles (nm) (station 1 ), 0.2nm (station 2}, 1.5nm (station 3), and 4nm (station 4) …

The Natural Provenance: Ecoliteracy In Higher Education In Mississippi, Sarah Elizabeth Wheeless

Dissertations

Researchers have suggested that there is an increasing apathy in the study of natural history both in academic settings and in the scientific community (Schmidly, 2005). Natural history is the cornerstone of ecological literacy. However, most studies of environmental knowledge do not directly address knowledge of local natural history. Instead, they concern knowledge of human environmental issues, environmental concepts, or broad ecological knowledge. Ecoliteracy established the study of natural history as fundamental to environmental knowledge and seeks to determine levels of knowledge of local environments and factors associated with that knowledge (Pilgrim et al., 2007).

This study investigated ecoliteracy in …

Factors Influencing The Environmental Quality Of The Bay Of Saint Louis, Mississippi And Implications For Evolving Coastal Management Policies, Pradnya Ankush Sawant

Dissertations

The Bay of St. Louis, MS is a small northern Gulf of Mexico estuary that has been identified by the Mississippi Department of Environmental Quality (MDEQ) as an impaired waterbody for its designated uses, mainly due to the presence of pollutant pathogens. A systematic study of this estuary was important to understand the behavior and responses of the bay to several natural and anthropogenic forcing factors. A 14- month long study (bimonthly sampling) to evaluate its environmental quality was undertaken from April 2003 to May 2004. Environmental quality was defined as "the health of an ecosystem characterized in terms of …