Ecology and Evolutionary Biology Commons^™

Selection Of Overwintering Microclimate By Migratory Western Monarch Butterflies, Kiana Saniee

Master's Theses

Migratory species are expected to demonstrate habitat selection that occurs at multiple spatial and temporal scales. Western monarch butterflies migrate seasonally to overwinter in groves at geographically predictable locations along the California coast. To date, overwintering habitat selection by western monarch butterflies has been studied assuming that habitat selection occurs where overwintering aggregations form, meaning at the spatial scale where monarchs form dense overwintering aggregations within overwintering groves. We argue that since western monarch butterflies are migratory, studies of habitat selection could have commingled selection at different scales into a single spatial scale. This likely leads to ignoring some levels …

Natural And Experimental Noise Affects Acoustic Communication In Songbirds, Veronica Arlene Reed

Master's Theses

Background noise is ubiquitous and can impair acoustic communication and influence signaling behavior in animals. Despite evidence demonstrating myriad effects of anthropogenic noise on animal communication, precisely how natural background noise influences communication and behavior remains unclear. Yet, natural sources of background noise, such as rushing rivers or crashing ocean surf, share similar power spectra to sources of anthropogenic noise and can occur at high amplitudes, potentially masking acoustic signals.

To investigate the effects of water-generated noise on songbird behavior, we experimentally broadcast landscape-level playbacks of ocean surf and river noise in coastal California, USA, and riparian habitat in Idaho, …

Transgenerational Plasticity Causes Differences In Uv-Tolerance Of Intertidal And Subtidal Populations Of The Purple Sea Urchin, Strongylocentrotus Purpuratus, Yareli Alvarez, Nikki L. Adams

Master's Theses

Planktonic larvae of marine organisms are increasingly being exposed and required to respond to a changing physical environment. Adult sea urchins occupy both intertidal and subtidal waters and broadcast spawn gametes into the water column to contend with variable physical conditions. To answer how populations of invertebrates residing at different depths adequately prepare their offspring to cope with different levels of ultraviolet radiation (UVR), we collected adult purple sea urchins, Strongylocentrotus purpuratus, from four sites (two intertidal and two subtidal (~15 m deep)) on the central coast of CA to compare UV tolerance in offspring. Our measurements of UVA …

The Influence Of The Sensory Environment On Avian Reproductive Success And Human Well-Being, Danielle Marie Ferraro

Master's Theses

Sensory pollutants such as anthropogenic noise and night lighting now expose much of the world to evolutionarily novel sound and night lighting conditions, which can have detrimental effects on humans and wildlife. In my first chapter, we exposed wild Western Bluebird (Sialia mexicana) nestlings to noise, light, and combination (i.e., noise and light) treatments. Nests exposed to noise and light together experienced less predation than control and light-exposed nests, and noise-exposed nests experienced less predation than control nests, yet overall nest success was only higher in noise-exposed nests compared to light-exposed nests. Although exposure to light decreased nestling body condition …

Pismo Clams (Tivela Stultorum) In Califorina: Population Status, Habitat Associations, Reproduction, And Growth, Alexandria R. Marquardt

Master's Theses

Marine shellfish play a vital role in intertidal ecosystems and coastal communities, but many of these fisheries are small-scale and lack the necessary monitoring to ensure long-term sustainability. Effective management often requires information on key demographic parameters, such as population status, reproduction and growth. Pismo clams (Tivela stultorum) are a culturally important and iconic species in California, which supported a thriving commercial and recreational fishery throughout much of the 1900’s. However, Pismo clam populations have declined statewide in recent decades and are attributed to human harvest and predation by California sea otters (Enhydra lutris); However, no …

Fucus Distichus: Investigating Humidity And Temperature Between Tides, Jason Thomas, Andrew Chang, Julia Blum, Chela Zabin

STAR Program Research Presentations

Environmental elements such as changing rapidly changing temperature, prolonged periods of low to no water exposure, desiccation, predation and increased wave action can influence the diversity of microhabitats that inhabit the littoral zones. When making observations of various shorelines, specifically the physical conditions of the surrounding marine vegetation (i.e. Fucus distichus), an inquiry is made as to the role of Fucus in the amelioration of stressors on the marine habitat during low tide (MLLW), however, due to time considerations, temperature and humidity are the focus of this study. Using temperature and humidity probes, monitoring data shows that Fucus provides …

Abundance And Community Composition Of Invasive Intertidal Watersipora On The San Francisco Bay Area Outer Coast, Kevin Myron, Meredtyh Duncan, Jaden Stone, C. Sarah Cohen

STAR Program Research Presentations

Invasive species can lead to serious ecological changes. The San Francisco Bay area is one of the most invaded areas in the world due to the commercial shipping industry and recreational water vessels. While the intertidal is not widely invaded, the harbors and docks are. One exception to this is the invasive, colonial filter-feeding bryozoan Watersipora, which has been found at various rocky outer coast sites. Further investigation into how the sites are invaded by this organism and their impact on native species must be carried out. In this project, at four intertidal sites around the SF Bay outflow, we …

Infestation Intensities, Attachment Patterns, And The Effect On Host Contest Behavior Of The Tick Ixodes Pacificus On The Lizard Sceloporus Occidentalis, Dylan M. Lanser

Master's Theses

Parasites often have profound effects on the survival and evolution of their hosts, and hence on the structure and health of entire ecosystems. Yet basic questions, such as the degree of virulence of a given parasite on its host, and factors influencing which hosts in a population are at the greatest risk of infection, are vexingly difficult to resolve. The western blacklegged tick-western fence lizard (Ixodes pacificus-Sceloporus occidentalis) system is important, primarily because I. pacificus, a vector of the Lyme disease spirochete Borrelia burgdorferi, is dependent on S. occidentalis for blood meals in its subadult stages, …

Short Term Shifts In Soil Nematode Food Feb Structure And Nutrient Cycling Following Sustainable Soil Management In A California Vineyard, Holly M. Deniston-Sheets

Master's Theses

Evaluating soil health using bioindicator organisms has been suggested as a method of analyzing the long-term sustainability of agricultural management practices. The main objective of this study was to determine the effects of vineyard management strategies on soil food web structure and function, using nematodes as bioindicators by calculating established nematode ecological indices. Three field trials were conducted in a commercial Pinot Noir vineyard in San Luis Obispo, California; the effects of (i) fertilizer type (organic and inorganic), (ii) weed management (herbicide and tillage), and (iii) cover crops (high or low water requirements) on nematode community structure, soil nutrient content, …

Rescue And Rehabilitation Of A Juvenile Red-Tailed Hawk: A Case Study, Maya Higa

Agricultural Education and Communication

Many raptor species are becoming threatened and, in some cases, endangered as a result of human activity including habitat destruction and pesticide use (Morishita, Fullerton, Lowenstine, Gardner & Brooks, 1998). Because of this, raptor rehabilitation has become increasingly popular in conservation efforts. In North America, the red-tailed hawk is one of the most widespread and commonly known birds of prey (Preston & Beane, 2009). According to the National Audubon Society, the conservation status of red-tailed hawks is currently of least concern and numbers may even be increasing in some areas since the 1960s. While this species is not threatened, the …

Dna And Protein Sequence Analysis Of Neuronal Markers Neuronal Nuclei (Neun) And Doublecortin (Dcx) In The Northern Pacific Rattlesnake (Crotalus Oreganus) And Western Fence Lizard (Sceloporus Occidentalis)., Brett M. Vassar

Master's Theses

Neuronal Nuclei (NeuN) and Doublecortin (DCX) are neuron specific proteins that are used in histological studies of brain structure in a variety of vertebrate taxa.Antibodies against NeuN (anti-NeuN) bind to the Fox-3 protein, an RNA binding protein common in mature neurons. Anti-DCX labels a microtubule-associated protein expressed in actively dividing neural progenitor cells and migrating neurons. The DCX gene encodes a protein that is well conserved across mammalian, avian, and a few reptilian species, therefore anti-DCX staining has been used successfully across a range of vertebrate taxa. Successful neuronal staining using anti-NeuN has been demonstrated in mammals, birds, and the …

Comparative Thermal Ecology Of Coastal And Inland Pacific Rattlesnakes (Crotalus Oreganus), Hayley Layne Crowell

Master's Theses

Global biodiversity is declining as a direct result of anthropogenic climate change. Ectothermic species have become focal organisms for studying the ecological effects of altered climates due to the clear relationship between environmental temperatures and ectotherms’ basic physiological functions. Historically, examinations of these effects have focused heavily on heliothermic lizards, and most others have tended to focus on single populations or sympatric species within a single community. Addressing the longterm energetic implications of environmental temperature variation will provide valuable insight into the cascading physiological effects that certain populations or species may experience as a result of altered climates.

In this …

Cichlid Size Vs Flow Rate, Amy E. Naumovski

STAR Program Research Presentations

Cichlids are a diverse group of fish that are known for their prenatal and postnatal care of their eggs and frys (baby fish). This unique characteristic creates a limitation on the amount of eggs a cichlid can lay and protect, which is particulalry effected by the size of the eggs. Cichlids have a large variance in their egg size, which correlates to a large variance in their fry size. This project explores the trade offs cichlids make in egg size and fry size by specifically testing the ability of varying sized cichlids to swim in different flow rates. This could …

Comparing Orientation Behavior And Prey Preference Of Leptasterias Spp. Between Microhabitats, Jenna C. Sanders, Margaret W. Johnson, C Sarah Cohen

STAR Program Research Presentations

Leptasterias spp. is a species complex of small, six rayed, predatory sea stars that inhabit rocky intertidal communities along the Pacific coast of North America. A developmental mode of brooding their young, rather than broadcasting for planktonic development, limits dispersal away from the natal area, and may also result in fine scale local adaptation of populations. Local adaptation may lead to morphological and behavioral differences among populations, specifically towards the most available prey. Within the rocky intertidalthere are zones of high and low wave impact which create microhabitats with their own selective forces. In areas of high wave impact, stars …

The Thermal Ecology Of Sceloporus Occidentalis, Luis Patricio Burgos

Master's Theses

With temperatures rising globally, assessing the possible impacts of the changing climate becomes more and more urgent. Ectotherms are excellent indicators of potential climatic ramifications on biodiversity because of their heavy reliance on the environment for their thermoregulation. Studies have historically looked at thermal tolerance values to establish predictive models for population and species extinctions.

In chapter 1, we looked at recent studies that suggest that thermal tolerance may be a plastic trait and test the effects empirically. Most studies are based on captive lizards acclimated to laboratory conditions that do not necessarily reflect natural environments, and if thermal tolerance …

Comparison Of An Endangered Species’ Seed Bank Before And After Ungulate Removal, Melanie K. Phillips, Kathryn Mceachern

STAR Program Research Presentations

The purpose of this study was to assess the impact of the removal of ungulates on the soil seed bank of the endemic Santa Rosa Island manzanita (Arctostaphylos confertiflora). A. confertiflora was trampled and browsed by non-native ungulates between the years 1850 and 2011 which reduced its ability to produce seeds.This species is an obligate seeder, meaning that sprouting from seeds in the soil is its only method of reproduction. Due in part to the lack of its soil seed bank, this species was federally listed as endangered by the US Fish and Wildlife Service in 1997. In order to …

Crossing Corridors: Wildlife Use Of Jumpouts And Undercrossings Along A Highway With Wildlife Exclusion Fencing, Alex J. Jensen

Master's Theses

Roads pose two central problems for wildlife: wildlife-vehicle collisions (WVCs) and habitat fragmentation. Wildlife exclusion fencing can reduce WVCs but can exacerbate fragmentation. In Chapter 1, I summarize the relevant studies addressing these two problems, with a focus on large mammals in North America. Chapters 2 and 3 summarize field assessments of technologies to reduce WVCs and maintain connectivity, specifically jumpout ramps and underpasses, along Highway 101 near San Luis Obispo, CA. In a fenced highway, some animals inevitably breach the fence and become trapped, which increases the risk of a wildlife-vehicle collision. Earthen escape ramps, or “jumpouts”, can allow …

Second Annual Survey On Narrowleaf Milkweed (Asclepias Fascicularis) And Western Monarch Butterfly (Danaus Plexippus) Populations In Pozo, Ca, Emily Rose Hermann, Francis Villablanca

Biological Sciences

The decline in milkweed (Asclepias spp.) populations across the country, due to factors including agricultural development and herbicide use, has lead to a correlated reduction of monarch butterfly (Danaus plexippus) feeding and breeding habitat. In addition, the intentional planting of non-native milkweed in areas surrounding overwintering habitat has altered Western monarch butterfly migratory behavior, by allowing monarchs to depart from their ancestral migration pattern (timing and location), therefore decreasing the effective population size, and putting monarchs at risk of higher pathogen prevalence, due, in part, to an obligate protozoan parasite that is able to persist on the …

Influences Of Anthropogenic Noise On Flight Initiation Distance, Foraging Behavior, And Feeder Community Structure Of Wild Birds, Alissa R. Petrelli

Master's Theses

Throughout the world, birds represent the primary type of wildlife that people experience on a daily basis. However, a growing body of evidence suggests that alterations to the acoustic environment can negatively affect birds as well as humans in a variety of ways, and altered acoustics from noise pollution has the potential to influence human interactions with wild birds. In this thesis, I investigated how anthropogenic noise impacts daily behavior as well as community structure of wild birds. In the first component of this thesis, I assessed the distance at which a bird initiates flight or escape behavior (i.e., flight …

Spatial And Temporal Heterogeneity Of Microbial Life In Artificial Landscapes, Roopkamal Kaur, Aditi Sengupta, Peter A. Troch

STAR Program Research Presentations

The Landscape Evolution Observatory (LEO) project at Biosphere 2 consists of three replicated artificial landscapes which are sealed within a climate-controlled glass house. LEO is composed of basaltic soil material with low organic matter, nutrients, and microbes. The landscapes are built to resemble zero-order basins and enables researchers to observe hydrological, biological, and geochemical evolution of landscapes in a controlled environment. This study is focused on capturing microbial community dynamics in LEO soil, pre- and post-controlled rainfall episodes. Soil samples were collected from six different positions and at five depths in each of the three slopes followed by DNA extraction …

The Population Genetics Of Morro Bay Eelgrass (Zostera Marina), Julia Gardner Harencar

Master's Theses

Seagrass populations are in decline worldwide. Zostera marina (eelgrass), one of California’s native seagrasses, is no exception to this trend. In the last 8 years, Morro Bay, California has lost 95% of its eelgrass. Eelgrass is an ecosystem engineer, providing important ecosystem services such as sediment stabilization, nutrient cycling, and nursery habitats for fish. The failure of recent restoration efforts necessitates a better understanding of the causes of eelgrass decline in this estuary. Previous research on eelgrass in California has demonstrated a link between population genetic diversity and eelgrass bed health, ecosystem functioning, and resilience to disturbance and extreme climatic …

An Assessment Of Potential False Positive E.Coli Pyroprints In The Cplop Database, Skyler A. Gordon

Master's Theses

The genetic information found in each species of organism is unique, and can be used as a tool to differentiate at the molecular level. This has caused rapid genotyping methods to become the cornerstone of a new area of research dependent on reading the genome as a form of identification. One of these specific identification methods, known as pyroprinting, relies on the small variation of DNA sequences within the same species to develop a unique, reproducible fingerprint. By simultaneously pyrosequencing multiple polymorphic loci within the ribosomal operons known as the intergenic transcribed spacers, a reproducible output is obtained, known as …

Symposium Volume 3, Issue 1

Symposium

Collection of research projects conducted by students of the College of Science and Math at California Polytechnic State University

Effect Of Oxygen-Limiting Tidal Conditions On Muscle Metabolism And Structure In The Giant Acorn Barnacle, Balanus Nubilus, Katie O. Grady

Master's Theses

Crustacean muscle fibers are some of the largest cells in the animal kingdom, with fiber diameters in the giant acorn barnacle (Balanus nubilus) exceeding 3 mm. Sessile animals with extreme muscle sizes and that live in the hypoxia-inducing intertidal zone – like B. nubilus – represent ideal models for probing the effects of oxygen limitation on muscle cells. We investigated changes in metabolism and structure of B. nubilus muscle in response to: normoxic immersion, anoxic immersion, or air emersion, for acute (6h) or chronic (6h exposures twice daily for 2wks) time periods. Following exposure, we immediately measured hemolymph …

Review: Interspecies Ethics By Cynthia Willett, Thomas E. Randall

Between the Species

This paper provides a review of Cynthia Willett's book Interspecies Ethics. Willett aims to outline the beginnings of biosocial eros ethics – an ethical outline that sketches the potentiality of a cross-species cosmopolitan ideal of compassion (agape), derived through acknowledging and emphasizing the existence of spontaneous, playful interaction between social animals. Though this book is recommended for offering an innovative framework from which to explore the possibility of non-anthropocentric cross-species ethic, readers should be wary of expecting to find a fully-fledged moral program detailing how this would work.

Soil Moisture On Soledad Ridge In Santa Rosa Island, Channel Islands National Park, Carrie Fong, Kathryn Mceachern, Ken Niessen

STAR Program Research Presentations

Santa Rosa Island is one of the Channel Islands off the coast of southern California. Before the island was heavily grazed, Santa Rosa Island is thought to have had large stands of island oak trees, Quercus tomentella, that provided a critical source of water for the ecosystem by creating a “cloud forest”. Wind-borne fog collects on the leaves, branches, and twigs of the island oaks and other native shrubs. Once the water condenses it drips, falls, and soaks into the soil. Introducing cattle and especially sheep to the island has damaged the ecosystem and nearly decimated Santa Rosa Island …

Studying The Effects Of Serpentine Soil On Adapted And Non-Adapted Species Using Arduino Technology, Kiana Saniee, Edward Himelblau, Brian Paavo

STAR Program Research Presentations

Abstract: Serpentine soils are formed from ultramafic rocks and are represent an extreme environment for plants. Serpentine soils are unique in that they carry high concentrations of heavy metals, are nutrient deficient, particularly in calcium, and have poor water retention capabilities. Although these soils constitute harsh conditions for plant growth, there are a number of species that are adapted and even endemic to serpentine soil. Water retention by commercial potting mix was compared with serpentine soil. Also, serpentine adapted and non-adapted species were grown in both soil treatments and physiological data were collected. We used the Arduino electronic platform to …

To Fish Or Not To Fish? What Effect Do California’S Marine Protected Areas Have On Up-And-Coming Kellet’S Whelk Fishery?, Jennifer Greene

STAR Program Research Presentations

Kellet’s whelk, Kelletia kelletii, were observed at sample sites throughout their range from Baja California, Mexico, to Monterey, CA to determine patterns of population density. Sample sites in each region were either located within California marine protected areas where take of the Kellet’s whelk in prohibited, or in non-protected areas where the whelks can be fished both commercially and recreationally. Kellet’s whelk population density was compared between all MPA and non-MPA sample sites. These mean densities were also found for sites in Santa Barbara and San Diego near active fishing ports and compared to data from the same sites collected …

Impacts Of Fog Drip On Survivorship And Growth Of Native Herb And Shrub Seedlings On Santa Rosa Island, Julianne Bradbury, Ken Niessen, Kathryn Mceachern

STAR Program Research Presentations

Overgrazing on Santa Rosa Island led to loss of topsoil in ridgeline groves of endemic island oaks (Quercus tomentella). Restoration specialists attempting to mitigate the impacts of wind and water erosion must determine efficient methods of reestablishing native vegetation. Planting pillows, burlap sacks filled with planting mix and attached to the bedrock substrate, may nurture seedlings long enough for their roots to penetrate the underlying sandstone. Since the island’s ridgeline habitat is often inaccessible during the rainy season, restoration efforts are largely confined to the dry summer months, during which condensed fog is an important source of moisture …

The Evaluation Of The Response Of American Eels To Rapid Decompression, Christina Macmillan, Alison Colotelo, John Stephenson, Briana Rhode, Trevor Macduff

STAR Program Research Presentations

Hydropower dams are used throughout the world to generate electricity and dams can negatively affect fish, as they can hinder or block migration or be a source of injury and mortality during passage. When moving downstream, fish can pass through the turbines instead of other routes (e.g. spillway and juvenile bypass system)where there is a sudden decrease in pressure that can cause barotraumas, injuries from the changes in barometric pressure, (e.g., hemorrhaging, embolism, ruptured organs) due to internal gases expanding. To determine the response of American eels, Anguilla rostrate, to rapid decompression, testing was conducted in the Mobile Aquatic …