Ecology and Evolutionary Biology Commons^™

Coho Salmon (Oncorhynchus Kisutch) Response To Habitat Restoration Through Space And Time: Monitoring Growth, Survival, And Movement In A Restored Habitat Network, Carter Perez Adamson

Cal Poly Humboldt theses and projects

Despite the decline of coho salmon (Oncorhynchus kisutch), Prairie Creek, a tributary of Redwood Creek in northern California, remains a coho salmon stronghold. The restoration of juvenile coho rearing habitat was identified as a recovery objective in this watershed by the National Marine Fisheries Service. Among the restoration projects addressing this objective are an ongoing project on Prairie Creek and its tributary Skunk Cabbage Creek, and a prior effort on Strawberry Creek (a tributary of Redwood Creek’s estuary). Standard monitoring methods for assessing project success have limitations and may be improved by measuring salmon use of restored habitats …

Intercontinental Variation In Population Genetics And Life-History Traits In Native And Invasive Populations Of The Aquatic Plants Myriophyllum Spicatum And Myriophyllum Sibiricum, Anastasia V. Mozharova

Graduate Doctoral Dissertations

Biological invasions pose significant threats to freshwater ecosystems worldwide, and understanding their evolutionary, genetic, and biogeographic drivers is essential for effective management. My dissertation integrates microsatellite and ITS rDNA data to examine the dynamics of both invasive and native populations of two closely related aquatic plant species, Myriophyllum spicatum (Eurasian watermilfoil) and M. sibiricum (Northern watermilfoil).

Myriophyllum spicatum is native to Eurasia, where it inhabits a variety of freshwater aquatic habitats. Since its introduction to North America in the mid-20th century, it has become highly invasive, forming dense underwater mats that outcompete native vegetation, reduce biodiversity, and degrade water quality. …

A New Subspecies Of Celastrina Lucia (W. Kirby) (Lycaenidae: Polyommatinae) In The Central Appalachian Mountain Region, Harry Pavulaan

The Taxonomic Report of the International Lepidoptera Survey

The Celastrina (“Azure”) populations of the central Appalachian Mountain region have traditionally been identified as Celastrina ladon (Cramer) by numerous authors. However, the discovery of elongated dorsal wing scales in males of C. ladon (Wright & Pavulaan, 1999; Ômura et al., 2015) established that this diagnostic trait is limited to C. ladon, C. nigra (W. Forbes), and subsequently C. iryna (Pavulaan). Microscopic examination of male “Spring Azure” specimens from higher elevations in the Appalachian Mountains revealed a complete absence of these elongated scales in the resident populations, despite their outward resemblance to C. ladon …

Current Threat To The Native Endemic Muckalee Crayfish (Procambarus Gibbus) From An Invasive Crayfish (Faxonius Palmeri Creolanus) And Tests Of Cold Tolerance As A Limiting Factor, Alexandria L. Exum, Nickeya Wynn, William Ellerbee, Madaline Toth, Otto T. Lorenz

Georgia Journal of Science

Surveys for native and invasive crayfish were conducted in Muckalee creek in 2015 and 2021. Both surveys used passive minnow traps and examined upstream and downstream sites, including at the mouth of the creek where it connects with the Flint River. The Flint River has been overrun with an invasive crayfish species, Faxonius palmeri creolanus (Creole Painted Crayfish) and its range has spread rapidly throughout southwest Georgia. In Muckalee Creek there were only a few F. p. creolanus found during each survey and both times they were only found at the mouth of the creek. One hypothesis on why they …

Update To: New Butterfly Taxa And Findings From Genomic Analyses, Jing Zhang, Qian Cong, Jinhui Shen, Leina Song, Nick V. Grishin

The Taxonomic Report of the International Lepidoptera Survey

Due to the United States government shutdown, GenBank services were unavailable, and accession numbers could not be obtained for the sequences reported in the original publication. This update provides the GenBank accession numbers for these sequences, together with additional taxonomic findings accumulated since the initial study. One genus, 16 species and four subspecies are proposed as new (type species or localities in parentheses): Madaga Grishin, gen. n. (Artitropa alaotrana Oberthür, 1916), Udranomia eurianus Grishin, sp. n. (Ecuador: Napo), Entheus dalina Grishin, sp. n. (Brazil: Pará), Entheus ambo Grishin, sp. n. (Colombia: Cauca), Entheus pico Grishin, sp. n. (Colombia: Valle …

The Ecology Of Arthropod Rain In A Tropical Forest., Andrew Robert Seiler

Electronic Theses and Dissertations

Tropical forests are structured by complex vertical linkages and nutrient exchanges between canopy and understory habitats. These linkages include the downward flux of organisms, the movement of canopy fauna, and the recycling of nutrients through litter and organic matter deposition. This dissertation investigates arthropod rain and its role in connecting the canopy and forest floor processes in a lowland tropical forest in Panama. Chapter 2 quantifies “arthropod rain”, the fall of canopy arthropods into the understory. Using pan and pole traps, I measured the composition, abundance, and biomass of arthropods falling from the canopy and assessed environmental drivers of the …

The Nebraska Bird Review (December 2025) 93(4), Whole Issue

Nebraska Bird Review

Changes to The Nebraska Bird Review, by Janis Paseka

Fall Field Report, August–November 2025, by W. Ross Silcock

First definitive records of Hermit Thrush and Wilson’s Warbler subspecies for Nebraska, by Stephen J. Brenner and Joel G. Jorgensen

Ogallala Fall Field Days, Sept. 26–28, 2025

Index to Volume 93

Subscription and Organization Information

Index To Volume 93

Nebraska Bird Review

Adams, Morgan
Aguiar: Maritza, Stephanie
Albright, Don
Alexander: Jeff, Jan
Aliferis, Taylor
Allard, Savannah
Allen, Edward
Allison, Betty
Altman, Dakota
Alvarado, A. H.
Ammon, E. M.
Anandan, Sampath Kumar
Andersen, Brett
Anderson: Ann, Chris, Will
Andrews, Ryan
Anhinga
Ani, Groove-billed
Annunziata, Laura
Armstrong, Nancy
Augustine, Jackie
Aurilio, James
Avocet, American

. . .

Zagst: Fred, Kay
Zeillemaker, Fred
Zemaitis, William
Zicafoose, Kirby
Zonotrichia leucophrys: gambelii, leucophrys, oriantha

First Definitive Records Of Hermit Thrush And Wilson’S Warbler Subspecies For Nebraska, Stephen J. Brenner, Joel G. Jorgensen

Nebraska Bird Review

During the fall of 2025, we initiated a pilot migratory bird-banding project in the Nebraska Panhandle. While the project’s goals included examining species composition, volume, and body condition of migratory birds at the western edge of the state compared to the eastern edge of the state, we also used this project to document the occurrence of subspecies and species which are very challenging or impossible to identify through field observation. Here, we report on the first definitive records of two subspecies in Nebraska.

On 16 September 2025, SJB banded an adult male Wilson’s Warbler (Cardellina pusilla) that was …

Fall Field Report, August–November 2025, W. Ross Silcock

Nebraska Bird Review

As in previous fall seasons, by far the most modifications to BONO came from late departure dates; around 87 species were included, no fewer than 13 of these setting record late dates, notably Eastern Whip-poor-will, Mountain Plover, Brown Thrasher (north), Henslow’s Sparrow (flight call only), and Orchard Oriole.

Although this is a Fall Seasonal Report, noted or suggested breeding activity is of interest. Exciting were the 2nd and 3rd presumed breeding records of Black-chinned Hummingbird and, in Dodge Co, the 5th record of breeding by Black-bellied Whistling-Duck. Perhaps the strangest west to east occurrence was a Golden Eagle adventure in …

Changes To The Nebraska Bird Review, Janis Paseka

Nebraska Bird Review

As of this issue, The Nebraska Bird Review has been in existence for 93 years, looking very much now as it did when it began in 1933. However, due to the increasing costs of printing and postage, there will be some changes in its future. Our newsletter, The Burrowing Owl, is already provided online to our members, in a user-friendly and informative form. Future issues of The Nebraska Bird Review will also utilize a digital format to offer a more timely and colorful publication.

This is the final issue for which Ross Silcock will be compiler of the seasonal …

Taxonomy Of Endophytic Fungi Associated With Vallisneria Neotropicalis, Md. Arafat Rashid

Graduate Theses and Dissertations (2019 - present)

This study presents the first comprehensive taxonomic and ecological investigation of endophytic fungi (EF) associated with the submerged aquatic macrophyte Vallisneria neotropicalis in the southern United States. Over a 12 month period, from April 2023 to March 2024, leaf samples were collected from two distinct sites in Mobile Bay, Alabama a disturbed, brackish Causeway location and a cleaner, less impacted site at Meaher State Park. Using culture dependent methods, a total of 257 fungal endophytes were isolated from 1,200 leaf segments. All isolates belonged to the phylum Ascomycota, distributed across 3 classes, 6 orders, 10 families, and 19 taxa. The …

Population Genomics Of Pacific Herring Spawning Aggregations In The Eastern Bering Sea, Sydney A. Almgren

Fisheries

Pacific herring (Clupea pallasii) is a critical forage fish to the marine environment, economy, and culture of Alaska. However, despite the importance of Pacific herring in Alaska and throughout the North Pacific, knowledge gaps exist for foundational genomic characteristics of the species, including genetic population structure and the basis of genetic sex determination. In this thesis, I addressed these knowledge gaps using low coverage, whole genome sequencing. I assessed population structure and genetic diversity across seven sampling sites and found three genetic populations: Unalaska, the farthest south sampling location, Kotzebue, the farthest north, and a third group unassociated with geographic …

Spotted Seal Coastal Haul Out Behavior In Arctic Alaska, Maeghan Connor

Biological Sciences

Hauling out - the act of exiting the water to rest, molt, breed, and pup on solid surfaces - is a key behavior of pinnipeds worldwide. Unlike other ice seals (i.e., ice-associated phocid species), spotted seals (Phoca largha) in Alaska frequently use terrestrial substrates to haul out during the summer and fall open-water period in the Chukchi and Beaufort Seas. Despite being a core aspect of spotted seal ecology, their terrestrial haul out behavior remains understudied. To address this, we analyzed data collected from 2020 - 2022 near two known haul out sites in Dease Inlet, Alaska, including time-lapse camera …

Ogallala Fall Field Days, Janis Paseka

Nebraska Bird Review

The 2025 NOU Fall Field Days were held in Ogallala on September 26–28, with about 80 in attendance. The programs were held at the Quality Inn, and the meeting was planned by Boni Edwards, Dave Cunningham, and Paul Pearson. Field trips were led by Tobin and Keegan Brown, Jacob Cooper and UNK ornithology students, Joel Jorgensen and Stephen Brenner, T. J. Walker, and Thane Dinsdale. Destinations included various sites around Lake McConaughy, Lake Ogallala, Cedar Point Biological Station, Sutherland Reservoir SRA, Ash Hollow State Historical Park, Crescent Lake NWR, Arthur Co and various Sandhills lakes. The total species count was …

Population Structure Analysis Of Four Basal Higher-Attines Using Bioinformatic Approaches, Gabriel Mcdanield

Biology Theses

Metapopulations within the family Formicidae are unique among other animals due to the large colonies they build, and the mating strategies required to fertilize a specialized reproductive caste that will often produce young for the life of the colony. One group of ants, the fungus-gardeners (tribe Attini). The population structure of North American non-leafcutting, fungus-gardening ants has been understudied, especially in the southwest of the United States. Additionally, not much is known about their dispersal biology, so the dynamics of dispersal of these species and how they affect population structure is likewise not well known. To shed light on the …

[Kyda] The Role Of Human Movement On The Spread Of Mosquito-Borne Diseases, Omar Saucedo

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

Exploring The Role Of Environmental Heterogeneity And Transmission In Mutualist Coexistence, Alexandra Campbell, Tom E.X. Miller

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

Following Carbon: Pathway And Flux Representations Of Ecosystems, Caner Kazanci

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

[Reev] Developing A Stage-Structure Stoichiometric Aquatic Tri-Trophic Food Chain Model, Ghislaine Niyodusenga, Cecilia Norris, Caroline Orza, Jing Li, Angela Peace, Greg Mayer, Rebecca A. Everett

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

Analyzing The Effect Of A Holling Type Iii Functional Response On Predator-Prey Dynamics, Lawrence G. Seminario-Romero, Richard Rebarber, Brigitte Tenhumberg

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

Metapopulation Model For Oyster Restoration, Leah Shaw

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

[Chu] Modelling The Effect Of Disturbed Blood-Feeding On Mosquito-Borne Disease Transmission, Kyle Dahlin, Michael Robert, Lauren Childs

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

Understanding The Spread Of Black Sigatoka Disease: A Deterministic And Stochastic Modeling Approach, Bernard Asamoah Afful, Luis F. Gordillo

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

A Compartmental Model For Diurnal Atlantic Stingray Migration, Rhianna Yates, Leah Glasser, Elena Wheatley, Christopher Hay-Jahans

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

A Compartmental Model For Periodic Animal Migration, Rhianna Yates, Leah Glasser, Elena Wheatley, Christopher Hay-Jahans

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

A Compartmental Model For Annual Blue Whale Migration, Leah Glasser, Christopher Hay-Jahans, Elena Wheatley, Rhianna Yates

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

Optimizing The Distribution Of Fruiting Agave On Bat-Friendly Tequila Plantations, Grace Gorreck, Clarissa Azurin, Lois Carpenter

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

New Butterfly Taxa And Findings From Genomic Analyses, Jing Zhang, Qian Cong, Jinhui Shen, Leina Song, Nick V. Grishin

The Taxonomic Report of the International Lepidoptera Survey

Continuing our genomics-driven exploration of butterfly taxonomy, we integrate phylogenetic trees from all protein-coding genes with existing taxonomic and phenotypic knowledge and uncover further insights into butterfly systematics. As a result, one subgenus, 44 species, and 11 subspecies are proposed as new (type species in original combinations or type localities are listed in parentheses): Porphaurea Grishin, subgen. n. (Phoenicops porphyropis Meyrick & Lower, 1902) of Chaetocneme C. Felder, 1860 in Hesperiidae Latreille, 1809; Dione (Agraulis) lamasi Grishin, sp. n. (Peru: Cuzco) in Nymphalidae Rafinesque, 1815; Lasaia (Lasaia) chiapis Grishin, sp. n. (Mexico: Chiapas), Lasaia …

The Micro-Communities Of Trees, Nicholas Davis, Lily Boysworth, Westen Wilburn

Fall Showcase for Research and Creative Inquiry

This study investigated how tree species diversity influences the variety of organisms living on or around trees across different habitat types. Field data were collected through random tree selection, measurement of tree diameter, identification of species, and estimation of surrounding ground cover types such as grass, herbaceous plants, woody plants, and leaf litter. Biodiversity associated with each tree was analyzed using the Shannon Diversity Index across several ecosystems, including grassland, woodland, and pond environments. Results indicated that the pond ecosystem exhibited the highest species diversity, followed by woodlands and then forests. A range of organisms, including lichens, mites, fungi, and …