Ecology and Evolutionary Biology Commons^™

Spring Field Report, March-May 2020, W. Ross Silcock

Nebraska Bird Review

Although there were numerous early arrival dates, most were in the range of historically earliest expected dates; notable, however, was a lone record-early Whiterumped Sandpiper, nicely photographed. Record late by a month was a juvenile Redtailed (Harlan’s) Hawk, also confirmed by photo. Perhaps most prominent this spring were the large numbers of several species. Most eye-popping were record spring totals of 22 Glossy Ibises, 11 Yellow-bellied Flycatchers, 14 Veeries, including five in the Panhandle, 48 Gray-cheeked Thrushes, 20 Bay-breasted Warblers, not long ago a rare bird in spring, 45 Golden-winged Warblers and 27 Canada Warblers, both of which were about …

The Nebraska Bird Review, Volume 88 March 2020 Number 1

Nebraska Bird Review

Winter Field Report, Dec. 2019 - Feb. 2020, by W. Ross Silcock …2

2019-2020 Christmas Bird Counts …18, 27-41

Annual Color Photo Section …19-26

Annual Treasurer's Report for 2019, by Jan Johnson …42

Subscription and Organization Information …43

Distribution And Reproduction By The Purple Gallinule (Porphyrio Martinica) In Arkansas, C. Renn Tumlison, Terry L. Tumlison, Tamzen T. Bryant

Journal of the Arkansas Academy of Science

The Purple Gallinule (Porphyrio martinica) is a rare bird in Arkansas, and its populations likely have declined due to loss of marshy areas with emergent vegetation. By use of online sources for citizen science combined with a field study, we elucidate the current distribution of this bird in Arkansas, and document characteristics of reproduction and development. Purple Gallinules arrive in Arkansas as early as April and remain to late October. Nesting occurs from early May into July, and nests may represent second broods. Ontogenetic changes in hatchlings are described.

Is Context Dependency Imperative To Understanding The Impacts Of Invasive Plants?, Brendan B. Haile

Masters Theses

Introduced exotic species have a tendency to become invasive and impact local biological communities. Invasions often impact community attributes such as cover and species richness, but these factors may also regulate patterns of invasion. In such cases, impacts may be dependent on the invasion context. We used data from the Buell-Small Succession Study, a long-term permanent plot study in the piedmont region of New Jersey, to document context dependency in invasion. To do this, we analyzed the factors that affected the colonization and growth of four invasive species, Alliaria petiolata, Lonicera japonica, Microstegium vimineum and Rosa multiflora, as well …

Intraspecific Aggression Towards Common Bottlenose Dolphin Calves, Northern Gulf Of Mexico, Errol Ronje, Sarah Piwetz, Heidi Whitehead, Keith D. Mullin

Gulf and Caribbean Research

Infanticide has been widely documented throughout the animal kingdom, and has generally been viewed as an evolved, or adaptive behavior for the perpetrators. Infanticide motivated by increased sexual access to females with calves, or the elimination of potential genetic competition in the form of calf-directed aggression or infanticide, has been proposed for delphinids including killer whales, Indo-Pacific humpback dolphins, Guiana dolphins, and bottlenose dolphins. However, reports of intraspecific aggression towards bottlenose dolphin calves are relatively infrequent, and accounts of confirmed infanticide are rarer still. Reporting instances of intraspecific calf-directed aggression aids researchers to better understand the socio-behavioral context of these …

Landscape Ecology And Population Genomics Of Two Sympatric Pitviper Species Across A Fragmented Appalachian Landscape, Thomas Maigret

Theses and Dissertations--Biology

Understanding the link between landscape patterns and ecological and evolutionary processes is an important prerequisite for informed wildlife conservation and management, especially in rapidly changing landscapes. Until recently, the inaccessibility of spatial and genomic data sets of sufficient resolution limited our ability to incorporate the impacts of landscape patterns into predictions of ecological and environmental outcomes. In this dissertation, I utilized several high-resolution spatial and genomic data sets to address ecological questions in a rapidly fragmenting landscape in southeastern Kentucky. Overall, my results indicate that large-scale surface coal mining is causing widespread homogenization of landforms, resulting in a uniquely permanent …

Black Bear, Jimmy D. Taylor, James P. Phillips

Wildlife Damage Management Technical Series

The American black bear (Ursus americanus, Figure 1) is a challenging species for wildlife agencies to manage due to its size, intelligence, extensive range, food habits, and adaptability, as well as societal views. In North America alone, agencies receive more than 40,000 complaints about black bear annually. Black bears are known as ‘food-driven’ animals, meaning most conflicts result from a bear’s drive to meet its nutritional needs. Not surprisingly, an overwhelming proportion of conflicts are related to their use of anthropogenic (human) food sources, such as garbage, bird food, and crops. Understanding what drives human-bear conflict is the first part …

Vertebrate Natural History Notes From Arkansas, 2020, C. Renn Tumlison, Matt Connior, Blake Sasse, Henry Robison, Stan Trauth, S Higdon, L Baer, Z. Baer, R. Stinson, D. Carson, T. Inebnit, L. Lewis, Roger Perry, Ron Redman

Journal of the Arkansas Academy of Science

Smaller details of natural history often go undocumented to science if those details are not parts of larger studies, but small details can provide insights that lead to interesting questions about ecological relationships or environmental change. We have compiled recent important observations of distribution and reproduction of fishes and mammals. Included are new distributional records of mammals, and observations of reproduction in several mammals for which few data exist in Arkansas. A rare record of the Long-tailed weasel, a special of special concern in Arkansas, is documented from Newton Co. We also provide evidence that Seminole bats likely reproduce in …

Sampling The Local Fare: Fishes At The Sam Israel House Pit (45gr76), Soap Lake, Washington, Adam Fruge

All Master's Theses

The Sam Israel site is a precontact archaeological complex with numerous fish bones at the north end of Soap Lake, Washington. Excavated in 1976, the fish remains recovered from there were never fully analyzed prior to this research. Since this inland Columbia Plateau site had thousands of fish bones, it contained untapped potential for our understanding of ancient local fish procurement. As such, I conducted a detailed analysis of 2,862 fish bone specimens from the Sam Israel House Pit locus to: study a larger sample of fish bones in greater detail than was done before; compare the distribution of fishes …

Toadal Isolation: Genetic Connectivity Of The Western Toad (Anaxyrus Boreas) Along I-90 In The Snoqualmie Pass Area Of Washington State, Anneliese Myers

All Master's Theses

Single-nucleotide polymorphisms (SNPs) were used to assess the genetic connectivity of western toad (Anaxyrus boreas) breeding populations along Interstate-90 near Snoqualmie Pass, WA. Sites north and south of the freeway were sampled during the breeding season of 2019. SNP loci were subsequently generated using the proprietary DArTseq^TM (Canberra, ACT, Australia) method. A total of 15,468 SNPs were used to calculate pairwise F_ST values and three distinct breeding populations were identified, two north and one south of I-90. All pairwise F_ST values between these sites were low (0.02) but significantly different from 0. The lowest pairwise …

Environmental Dna Is An Effective Method To Monitor Species In Various Freshwater Habitats, Kayleigh Mullen

All Master's Theses

This research investigated the use of DNA shed from individuals into the environment (eDNA) to monitor three amphibian species and two trout species associated with habitat intersected by Interstate-90 in Snoqualmie Pass, Washington. This included a large catchment area within creeks and nearby wetlands historically affected by I-90, including sites where significant habitat improvements had been made. Species-specific primers were used to detect three focal amphibians of varying local abundance and two focal trout species. This study showed successful detection of species across both lentic and lotic systems throughout the study area through efficient multiplexing (detection of multiple species in …

Diversity Analysis Of Soil Fungus Communities In Disturbed, Nursery, And Mature Forest Conditions, Dana Whitmore

All Master's Theses

Populations of soil fungi were examined in Derby Canyon Natives, Coeur d’Alene Forest Service nursery, Swamp Lake, and the Keechelus Lake wildlife overcrossing soils. All sampling sites were connected by their relation to the revegetation and native soil plug inoculation of the wildlife overpass. This study was an effort to describe soil fungi communities present on the overpass before plant introduction, those that plants would be bringing in their pots, and the fungi that could be introduced via soil plug transplantation. DNA was extracted from soil samples, then sequenced using next-generation sequencing methods, allowing for the analysis of species richness …

Ecological And Genetic Connectivity Of Shrews (Sorex Spp.) Across Interstate-90 In The Washington Cascade Range, Jordan Ryckman

All Master's Theses

Roads negatively affect wildlife by degrading and fragmenting habitat. The I-90 Snoqualmie Pass East project was established to improve traffic safety for both humans and wildlife. Here, the Washington State Department of Transportation is constructing wildlife crossing structures to increase ecosystem connectivity as part of this project. The goal of my study was to investigate shrews – very small mammals with presumably low mobility and dispersal capacity – at sites on the eastern slopes of the Cascade Range where wildlife crossing structures will be built in the future. My main objectives were to verify shrew species composition, assess population genetic …

Habitat Stability In Appalachian Headwater Systems And Potential Impacts On Brook Trout Populations, Zac F.W Zacavish

Graduate Theses, Dissertations, and Problem Reports (ETD)

The impact climate change will have on the habitat for Brook Trout (Salvelinus fontinalis) could directly impact key demographic characteristics. Traditionally, broad-scale studies of climate change effects on the family Salmonidae focus on the thermal shifts predicted over the next century. While some studies shed light onto other variables such as biotic interactions, flow regime, and disturbance, the significance of the climate-trout interaction is not always observed. With the high degree of influence climate cycles can have on habitat and channel morphology, this study aimed to highlight temporal habitat shifts to begin addressing climate-habitat interaction. By studying habitat distribution …

Trees, Fungi, Insects: How Host Plant Genetics Builds A Community, Sandra Jeanne Simon

Graduate Theses, Dissertations, and Problem Reports (ETD)

Organisms, such as fungi and insects, can cause millions of acres of agricultural and forest damage, while others provide billions of dollars in ecological services such as education, aesthetic enjoyment, pollination, and gardening. Plant breeding and biotechnology can potentially help establish a balance between the proliferation of detrimental pests and attraction of beneficial insects. Variation in plant physiological and morphological characteristics are extremely important in the ability of host tissues to support many different types of organisms. When that variation is genetically heritable in a plant population, shifts in the underlying genes can have predictable consequences in structuring entire ecosystems. …

Multi-Isotopic (Δ2h, Δ13c, Δ15n) Tracing Of Molt Origin For European Starlings Associated With U.S. Dairies And Feedlots, Scott Werner, J. W. Fischer, Keith A. Hobson

United States Department of Agriculture Wildlife Services: Staff Publications

Introduced bird species can become invasive in agroecosystems and their management is inhibited if their origin and movements are not well understood. Stable isotope measurements of feathers can be used to infer molt origins and interstate movements in North America. We analyzed stable-hydrogen (δ²H), carbon (δ¹³C) and nitrogen (δ ¹⁵N) isotope ratios in feathers to better understand the molt origin of European starlings (Sturnus vulgaris) collected at dairies and feedlots throughout the United States. Primary feathers were used from 596 adult and 90 juvenile starlings collected during winter at dairies …

Tissue Tropisms Of Avian Influenza A Viruses Affect Their Spillovers From Wild Birds To Pigs, Xiaojian Zhang, Fred L. Cunningham, Lei Li, Katie Hanson-Dorr, Liyuan Liu, Kaitlyn Waters, Minhui Guan, Alicia K. Olivier, Brandon S. Schmit, Jacqueline M. Nolting, Andrew S. Bowman, Mia Kim Torchetti, Thomas J. Deliberto, Xiu-Feng Wan

United States Department of Agriculture Wildlife Services: Staff Publications

Wild aquatic birds maintain a large, genetically diverse pool of influenza A viruses (IAVs), which can be transmitted to lower mammals and, ultimately, humans. Through phenotypic analyses of viral replication efficiency, only a small set of avian IAVs were found to replicate well in epithelial cells of the swine upper respiratory tract, and these viruses were shown to infect and cause virus shedding in pigs. Such a phenotypic trait of the viral replication efficiency appears to emerge randomly and is distributed among IAVs across multiple avian species and geographic and temporal orders. It is not determined by receptor binding preference …

Repellent Surface Applications For Pest Birds, Shelagh T. Deliberto, James C. Carlson, Hailey E. Mclean, Caroline S. Olson, Scott J. Werner

United States Department of Agriculture Wildlife Services: Staff Publications

Common pest birds in the United States include the non-native European starling (Sturnus vulgaris), house sparrow (Passer domesticus), and the pigeon (Columba livia domestica), as well as native birds including Canada geese (Branta canadensis) and gull species (Laridae). Large concentrations of pest birds can create human health hazards and monetary losses due to consumption of crops, depredation, and fecal contamination and accumulation. Fecal contamination hazards include the potential spread of zoonotic diseases including antimicrobial-resistant zoonoses and human injury due to the accumulation of fecal material on walking surfaces. Additionally, fecal accumulation causes …

Plant-Pollinator Associations In An Eastern Serpentine Savannah And The Effects Of Overbrowsing, Allyson Richins

Theses and Dissertations

Chapter 1: Native plant response to deer overbrowsing in a serpentine savannah

Plants are particularly vulnerable to physical disturbance in low productivity areas, due to a high cost of replacing lost plant tissue. In the eastern United States, serpentine grasslands are fragmented ecosystems with high concentrations of rare endemic plant species, low concentrations of soil nutrients, and uncontrolled deer overpopulation. This study assessed functional responses of native angiosperms in a rare eastern serpentine savannah to selective deer browsing. Plant count, flower count, floral area, vegetative area, and plant height of 10 serpentine plant species were compared inside and outside of …

Use Of Roadside Deer Removal To Reduce Deer–Vehicle Collisions, John C. Kilgo, John I. Blake, Tracy E. Grazia, Andy Horcher, Michael Larsen, Thomas Mims, Stanley J. Zarnoch

Human–Wildlife Interactions

Identification of management tools to reduce the incidence of deer–vehicle collisions (DVCs) is important to improve motorist safety. Sharpshooting to reduce white-tailed deer (Odocoileus virginianus; deer) along roads has proven successful in urban situations but has not been evaluated in undeveloped areas. We used a before-after-control-impact (BACI) design to evaluate the use of sharpshooting to reduce DVCs along roads on the uninhabited U.S. Department of Energy’s Savannah River Site, South Carolina, USA, during 2011–2017. We removed 242 deer from 4 treatment roads during 2015 and 2016, with 2-year removal rates per road averaging 5.0 deer/km of road (range …

After Decades Of Suburban Deer Research And Management In The Eastern United States: Where Do We Go From Here?, Paul D. Curtis

Human–Wildlife Interactions

State wildlife agencies have regulatory authority and oversight over deer (Cervidae) management in the United States. However, increased urban sprawl and overabundant deer populations have created increased human–deer conflicts. Because of the growing controversy surrounding the use of traditional management practices such as regulated hunting in suburban areas in the eastern United States, managers are now using specialized tools and management approaches to reduce deer conflicts in urban areas. However, this has created new challenges as they try to meet the desires of diverse stakeholder groups. Although deer management programs in urban areas differ somewhat in every state, effective management …

Table Of Contents

Human–Wildlife Interactions

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Size At Maturation, Spawning Variability And Fecundity In The Queen Conch, Aliger Gigas, Richard S. Appeldoorn

Gulf and Caribbean Research

The queen conch (Aliger gigas) resource is one of the most important in the Caribbean. While aspects of queen conch reproduction have been studied, e.g., size—at—maturity, spawning season, and density—based Allee effects, there is little information on other important aspects. From 210 lipped queen conch collected off southwest Puerto Rico, histological examination of gonads showed that 50% maturation occurred at 9 mm lip thickness. Experimental caged queen conch held on a natural spawning ground were monitored across the spawning season to evaluate fecundity and its variability across individuals and between nominal density treatments (2,000 vs 143 conch/ha). Near …

Ecologically Distinct Populations Of Hawaiian Petrel (Pterodroma Sandwichensis): Quantitative Isotopic Analysis To Explore The Uniqueness Of Foraging Habits In Kauai And Hawaii Populations, Drew Casey

Williams Honors College, Honors Research Projects

Many topics from conservation biology, evolutionary biology, and ecology will be applied to help answer the question many conservation biologists ask: is this population both genetically and ecologically distinct enough to warrant an independent conservation approach? If the answer is yes, then more resources can be distributed to conserving that population. If the answer is no, more resources can be devoted to other conservation goals, such as conserving one of the other three breeding populations of Hawaiian petrel or generally trying to maximize the overall population size of the species and possibly saving the endangered Hawaiian petrel. This will be …

Multivariate Habitat-Based Predictive Modeling Of Three Demersal Rockfish Species In Central California, Georgia R. Martel

Cal Poly Humboldt theses and projects

Accurate, spatially explicit models of rockfish abundance are critical in implementing ecosystem-based management strategies and designating essential fish habitats and marine protected areas. Multibeam bathymetry methods and visual, non-extractive submersible transect surveys were combined to collect environmental variables and fish abundance data at three distinct sites within the study region. Zero-adjusted models were developed using habitat classification analyses of high-resolution (5 m) digital elevation models. Model accuracies were assessed by using a reserved subset of the original datasets. To demonstrate that a model’s predictive power was linked to its spatial origins, Mean Absolute Error and coefficient of determination values were …

A Tale Of Two Cervids: Habitat Selection And Spatial Ecology Of Roosevelt And Tule Elk In California, Adam S. Mohr

Cal Poly Humboldt theses and projects

California’s Roosevelt (Cervus canadensis rooseveltii) and tule elk (C. c. nannodes) populations have experienced a remarkable recovery after over-hunting and habitat loss nearly extirpated them from the state. Greater clarity of Roosevelt and tule elk habitat selection patterns would help managers continue to effectively support the recovery of these two iconic subspecies. As the manner in which elk populations balance their competing resource needs is unique to each population (Skovlin et al. 2002), I have examined Roosevelt and tule elk habitat selection patterns in separate analyses and present these results in independent chapters. In both cases, …

Phylogenetic And Population Genetic Analysis Of The Humboldt's Flying Squirrel Using High-Throughput Sequencing Data, Stella Chi Yuan

Cal Poly Humboldt theses and projects

The intraspecific genetic variation and diversity within the Humboldt’s flying squirrel (Glaucomys oregonensis) has not yet been characterized despite its elevation to full species in 2017. The San Bernardino flying squirrel (G. o. californicus) is thought to be the southernmost population of G. oregonensis and is restricted to the San Bernardino and San Jacinto Mountains in California, but recent surveys indicate they have been extirpated from the latter locality. In order to provide baseline genetic data across the geographic range of G. oregonensis, I had the following objectives: 1) investigate the intraspecific molecular variation in …

Estimates Of Calf Survival And Factors Influencing Roosevelt Elk Mortality In Northwestern California, Erin Nigon

Cal Poly Humboldt theses and projects

Survival of juvenile ungulates is known to be highly variable, yet it is fundamental to understanding the dynamics and trends of wildlife populations. Factors influencing calf survival are poorly understood in northwestern California where Roosevelt elk (Cervus canadensis roosevelti) are known to exist. The objectives of this study were 1) to estimate summer and annual survival rates and determine recruitment rates for Roosevelt elk calves in the area, 2) to evaluate differences in calf survival by examining the effects of individual and population level covariates on summer and annual calf survival, 3) to identify factors influencing the timing …

Spatial And Temporal Genetic Structure Of Winter-Run Steelhead (Oncorhynchus Mykiss) Returning To The Mad River, California, Steven R. Fong

Cal Poly Humboldt theses and projects

Distinct populations of steelhead in the wild are in decline. The propagation of steelhead in hatcheries has been used to boost population numbers for recreational fisheries and for use in conservation. However, hatchery breeding practices of steelhead can result in changes in genetic structure. I investigated the genetic structure of winter-run steelhead (Oncorhynchus mykiss) returning to the Mad River, California, where a hatchery has been used enhance production for recreational fisheries since 1971. Genetic variability in Mad River steelhead was evaluated using 96 single nucleotide polymorphisms (SNPs) among 4203 individuals, including the Mad River and nearby locations, and …

The Effects Of Woody Vegetation Encroachment And Removal Within A Coastal Fen, Joseph Saler

Cal Poly Humboldt theses and projects

Early successional wetland habitat is being lost in temperate regions worldwide as a result of changes in disturbance regimes that allow for the establishment and dominance of woody species. In particular, this phenomenon is pronounced in fens, which harbor high numbers of rare herbaceous species that require early successional habitat. I investigated the relationship between woody vegetation encroachment and herbaceous species diversity within a Northern California coastal fen that has been undergoing encroachment by woody vegetation for ca. 80 years by recording species richness and cover data from 338 permanent plots throughout the fen. I also investigated the effect of …