Ecology and Evolutionary Biology Commons^™

Adaptive Management Facilitates Increase In Northern Bobwhite Populations, James A. Martin, Clay Sisson, Justin Rectenwald, Paige Howell

National Quail Symposium Proceedings

Adaptive resource management (ARM) is an approach to managing that allows decision makers to learn about a system and subsequently change management actions based on new information about system processes (i.e., adapt) to better meet fundamental objectives. This is not to be confused with changing management actions when the state of the system changes. For example, changing a harvest regulation when populations decline is not ARM. This dynamic decision making may be fortuitously optimal, but if the effect of harvest is uncertain then changing regulations may be suboptimal—for example, weather may have caused the decline. Adaptive resource management can be …

Northern Bobwhite Demographics And Resource Selection Are Explained By Prescribed Fire With Grazing And Woody Cover In Southwest Missouri, Frank R. Thompson Iii, Mitch D. Weegman, Emily A. Sinnott, Alisha R. Mosloff, Kyle R. Hedges, Frank L. Loncarich, Thomas R. Thompson, Nicholas C. Burrell, Stasia Whitaker, David E. Hoover

National Quail Symposium Proceedings

Understanding the effects of landscape management on northern bobwhite (Colinus virginianus; hereafter, bobwhite) population growth requires information about seasonal- and stage-specific demographic parameters linked across the annual cycle. We review results to date from 3 years (2016–2018) of an intensive field study evaluating drivers of bobwhite population dynamics and resource selection during the breeding and non-breeding season in southwest Missouri, USA using data from adult and juvenile bobwhite fitted with radio-transmitters. Land cover of our study sites ranged from large blocks of native grasslands maintained with prescribed fire and grazing to more traditional management resulting in small patches …

Adaptive Management And Quail Conservation On Rangelands In The American West, Leonard A. Brennan, Ashley Tanner, Evan P. Tanner

National Quail Symposium Proceedings

Adaptive management has been and is being practiced with the goal of sustaining populations of wild quails on large areas of rangelands in the American West. Because the current land use practices throughout most of the eastern two-thirds of the United States largely do not promote early-successional vegetation communities, rangelands contain the largest remaining blocks of contiguous (unfragmented) habitat for the northern bobwhite (Colinus virginianus) and the other 5 species of quails found in the western states. Many wildlife professionals on both private and public rangelands are practicing a diverse array of quail habitat and population management actions …

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National Quail Symposium Proceedings

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The Effect Of Habitat Fragmentation On Plant Communities In A Spatially-Implicit Grassland Model, Mika T. Cooney, Benjamin R. Hafner, Shelby E. Johnson, Sean Lee

Rose-Hulman Undergraduate Mathematics Journal

The spatially implicit Tilman-Levins ODE model helps to explain why so many plant species can coexist in grassland communities. This now-classic modeling framework assumes a trade-off between colonization and competition traits and predicts that habitat destruction can lead to long transient declines called ``extinction debts.'' Despite its strengths, the Tilman-Levins model does not explicitly account for landscape scale or the spatial configuration of viable habitat, two factors that may be decisive for population viability. We propose modifications to the model that explicitly capture habitat geometry and the spatial pattern of seed dispersal. The modified model retains implicit space and is …

City Of Culver City Coyote Management Report, Melinda Weaver, Michele Romolini, Eric G. Strauss

Center for Urban Resilience Reports

EXECUTIVE SUMMARY

The scientific staff at the LMU Center for Urban Resilience, along with affiliated scientists, collaborators and students conducted a three-year management study in order to assist the City of Culver City and its residents in managing the dynamic challenge of coexisting with resident and transient coyotes. Despite the considerable social and logistical upheaval caused by the Covid-19 outbreak, CURes staff and collaborators collected and analyzed data continuously through the various phases of the pandemic. The goals of the project were to: 1) Gather appropriate ecological, technical and human social data with regard to coyote ecology and human-wildlife conflict, …

Divergent Neural And Endocrine Responses In Wild-Caught And Laboratory-Bred Rattus Norvegicus, Joanna Jacob, Sally Watanabe, Jonathan Richardson, Nick Gonzales, Emily Ploppert, Garet Lahvis, Aaron Shiels, Sadie Wenger, Kelly Saverino, Janhavi Bhalerao, Brendan Crockett, Erin Burns, Olivia Harding, Krista Fischer-Stenger, Kelly Lambert

United States Department of Agriculture Wildlife Services: Staff Publications

Although rodents have represented the most intensely studied animals in neurobiological investigations for more than a century, few studies have systematically compared neural and endocrine differences between wild rodents in their natural habitats and laboratory strains raised in traditional laboratory environments. In the current study, male and female Rattus norvegicus rats were trapped in an urban setting and compared to weight-and sex-matched conspecifics living in standard laboratory housing conditions. Brains were extracted for neural assessments and fecal boli were collected for endocrine [corticosterone and dehydroepiandrosterone (DHEA)] assays. Additionally, given their role in immune and stress functions, spleen and adrenal weights …

Climate Warming Amplifies The Frequency Of Fish Mass Mortality Events Across North Temperate Lakes, Simon P. Tye, Adam M. Siepielski, Andrew Bray, Andrew L. Rypel, Nicholas B.D. Phelps, Samuel B. Fey

Biological Sciences Faculty Publications and Presentations

Recent increases of animal mass mortality events have coincided with substantial changes in global climate. Yet, tractable approaches that predict how climate change will accentuate occurrences of these ecological catastrophes remain nascent. We compiled one of the most comprehensive datasets of lentic fish mortality events, thermal tolerances of affected families, and 1.2 million air and water temperature profiles across 8891 north temperate lakes in North America. Temperature extremes within and across lakes were strongly associated with the three most frequent cause types (infectious agents, summerkills, winterkills). Thermal tolerances mediated the lethality of direct thermal stress, but mortalities of warm- and …

A Study Of Red Snapper (Lutjanus Campechanus) Ecology In The Northern Gulf Of Mexico And The Effect Of Variable River Outflow Using Stable Isotope Analysis Of The Food Web And Eye Lenses, Caitlin C. Slife

Dissertations

In the Mississippi Bight and surrounding waters, river outflow impacts the basal resources of the Red Snapper food web, altering carbon sources and impacting prey and predator isotopes. In this study, the impact of riverine outflow on nutrients, particulate organic matter (POM), and physical water parameters on Red Snapper and their food web was analyzed using stable isotope and stomach content analysis over 5 years. The Mississippi, Pearl, Pascagoula, and Mobile rivers were included in the analysis of river impact. The Mississippi and Mobile rivers were found to significantly impact nutrients and POM in the region. River outflow was also …

Experimental Infection Of Brazilian Free-Tailed Bats (Tadarida Brasiliensis) With Two Strains Of Sars-Cov-2, Angela M. Bosco-Lauth, Stephanie M. Porter, Karen A. Fox, Mary E. Wood, Daniel Neubaum, Marissa Quilici

United States Department of Agriculture Wildlife Services: Staff Publications

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is presumed to have originated from wildlife and shares homology with other bat coronaviruses. Determining the susceptibility of North American bat species to SARS-CoV-2 is of utmost importance for making decisions regarding wildlife management, public health, and conservation. In this study, Brazilian free-tailed bats (Tadarida brasiliensis) were experimentally infected with two strains of SARS-CoV-2 (parental WA01 and Delta variant), evaluated for clinical disease, sampled for viral shedding and antibody production, and analyzed for pathology. None of the bats (n = 18) developed clinical disease associated with infection, shed infectious virus, or …

Long-Term Effect Of A Gnrh-Based Immunocontraceptive On Feral Cattle In Hong Kong, Rebecca Pinkham, Ka-Kei Koon, Jason To, Jason Chan, Flavie Vial, Matt Gomm, Douglas C. Eckery, Giovanna Massei

United States Department of Agriculture Wildlife Services: Staff Publications

Increasing human-wildlife conflicts worldwide are driving the need for multiple solutions to reducing “problem” wildlife and their impacts. Fertility control is advocated as a non-lethal tool to manage free-living wildlife and in particular to control iconic species. Injectable immunocontraceptives, such as GonaCon, stimulate the immune system to produce antibodies against the gonadotrophin-releasing hormone (GnRH), which in turn affects the release of reproductive hormones in mammals. Feral cattle (Bos indicus or Bos taurus) in Hong Kong are an iconic species whose numbers and impacts on human activities have increased over the last decade. Previous studies have proven that a …

Long-Term Effect Of A Gnrh-Based Immunocontraceptive On Feral Cattle In Hong Kong, Rebecca Pinkham, Ka-Kei Koon, Jason To, Jason Chan, Flavie Vial, Matt Gomm, Douglas C. Eckery, Giovanna Massei

United States Department of Agriculture Wildlife Services: Staff Publications

Increasing human-wildlife conflicts worldwide are driving the need for multiple solutions to reducing “problem” wildlife and their impacts. Fertility control is advocated as a non-lethal tool to manage free-living wildlife and in particular to control iconic species. Injectable immunocontraceptives, such as GonaCon, stimulate the immune system to produce antibodies against the gonadotrophin-releasing hormone (GnRH), which in turn affects the release of reproductive hormones in mammals. Feral cattle (Bos indicus or Bos taurus) in Hong Kong are an iconic species whose numbers and impacts on human activities have increased over the last decade. Previous studies have proven that a …

Spatio-Temporal Changes In Vegetation In The Last Two Decades (2001–2020) In The Beijing–Tianjin–Hebei Region, Yuan Zou, Wei Chen, Siliang Li, Tiejun Wang, Le Yu, Min Xu, Ramesh P. Singh, Cong-Qiang Liu

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

In terrestrial ecosystems, vegetation is sensitive to climate change and human activities. Its spatial-temporal changes also affect the ecological and social environment. In this paper, we considered the Beijing–Tianjin–Hebei region to study the spatio-temporal vegetation patterns. The detailed analysis of a moderate-resolution imaging spectroradiometer (MODIS) data were carried out through the Google Earth Engine (GEE) platform. Our results show a slow and tortuous upward trend in the average leaf area index (LAI) in the study region for the periods 2001–2020. Specifically, Beijing had the highest LAI value, with an average of 1.64 over twenty years, followed by Hebei (1.30) and …

Benthic Community Dynamics And Stony Coral Demographics In Florida In Relation To Acute Disturbances And Chronic Pressures, Nicholas P. Jones

All HCAS Student Capstones, Theses, and Dissertations

The persistence of coral reef communities is threatened by a suite of pressures operating at varying spatial and temporal scales. In general, acute disturbances (short term stochastic events such as marine heatwaves or hurricanes) and chronic pressures, such as ocean warming, have caused the most significant changes to stony coral assemblages (order Scleractinia) and continue to impair recovery potential. Additionally, many coral reefs are subject to local chronic anthropogenic pressures resulting in poor water quality or sedimentation, which further impact stony corals and shape benthic community structure, particularly near urbanized coastlines. For the viability of communities on coral reefs, a …

The Paleoecology Of High-Elevation Bison In The Greater Yellowstone Ecosystem And Implications For Modern Bison Conservation, Darian Bouvier

Electronic Theses and Dissertations

The national mammal of the United States, the American Bison (Bison bison) was once nearly extinct. Populations have recovered to the degree that thousands roam the Great Plains today. Due to their large numbers and body size, this species has an oversized impact on the ecological communities where it lives and is considered a keystone herbivore in modern North American grasslands. This study explores the detailed, seasonally resolved, paleoecology of seven bison from the Greater Yellowstone Ecosystem during the Late Holocene through stable isotope analyses and species niche modeling. Isotopic analyses of δ¹³C, δ¹⁵N, …

Community Structure Analysis Of Turtles With Application To The Early Pliocene Gray Fossil Site, Julian Conley

Electronic Theses and Dissertations

Turtles are important components of ecosystems around the world, with diverse ecological niches and adaptations. However, there are few detailed studies of how turtle community structure reflects local environments. This project applied techniques of community structure analysis to sites across the United States to infer past ecosystem and environmental conditions of the early Pliocene Gray Fossil Site (GFS) in northeastern Tennessee based on the ancient turtle community. Results indicate extant turtle community structure closely reflects environmental conditions, and that ancient turtle communities can be used to infer climate and habitat conditions of past ecosystems. Application to the GFS turtle community …

Chromosome Number Evolution, Phylogeography, And The Effects Of Climate Change On Species Distributions In Polyploid Plant Systems, Courtney H. Babin

LSU New Orleans Theses and Dissertations

Polyploidy, a term used to describe organisms with cells having more than two paired sets of chromosomes, is a significant driver of diversification among land plants. Over a century of research has advanced our understanding of polyploidization in some taxa, but polyploid organisms remain understudied. In this dissertation, I investigate chromosome number evolution, phylogeographic structure, genetic differentiation, and the effects of climate change on ploidy level distribution using polyploid plant systems. In the first chapter, I inferred a molecular phylogeny of Allium, an economically important genus that includes cultivated crops and ornamentals, to investigate evolutionary transitions in chromosome number …

Investigation Of Dead Ocean Quahogs (Arctica Islandica) Shells On The Mid-Atlantic Bight Continental Shelf, Alyssa Leclaire

Master's Theses

Ocean quahogs, Arctica islandica, are a long-lived, widely dispersed, biomass dominate in the Mid-Atlantic; therefore, quahog shells are valuable resources for studying climate change over time. Recently, dead ocean quahog shells were discovered south and inshore of the present biogeographic range of this animal. The presence of ocean quahog shells outside the current range is presumably a consequence of past regressions and transgressions of the Cold Pool, the bottom-trapped, cool body of water that allows boreal animals to live at lower latitudes. Dead ocean quahog shells were collected offshore of the DelMarVa Peninsula then radiocarbon-dated, evaluated for taphonomic condition, …

Nestedness And Modularity Of Avian Metacommunities Across Gradients Of Chesapeake Bay Island Characteristics, Grant Walter Bowers

Biological Sciences Theses & Dissertations

Islands are not only great models for understanding the ways in which communities are linked by the dispersal of their members to form metacommunities, but are of particular interest to conservationists. One important aspect of metacommunity structure is the degree of nestedness—whether or not less speciose communities are perfect subsets of more speciose communities. Another important metric of metacommunity structure is modularity—the degree to which communities belong to modules composed of other communities that share the same species but have little species overlap with communities from different modules. Environmental gradients have received insufficient attention as predictors of metacommunity nestedness and …

In Vivo Efficacy Of Pyrantel Pamoate As A Post-Exposure Prophylactic For Rat Lungworm (Angiostrongylus Cantonensis), John Jacob, Argon Steel, Lisa Kaluna, Steven Hess, Israel Leinbach, Carmen Antaky, Robert Sugihara, Lindsey Hamilton, Peter Follett, Kathleen Howe, Steven Jacquier, Supakit Wongwiwatthananukit, Susan Jarvi

United States Department of Agriculture Wildlife Services: Staff Publications

Rat lungworm (Angiostrongylus cantonensis) is a neurotropic nematode, and the leading cause of eosinophilic meningitis worldwide. The parasite is usually contracted through ingestion of infected gastropods, often hidden in raw or partially cooked produce. Pharmaceutical grade pyrantel pamoate was evaluated as a post-exposure prophylactic against A. cantonensis. Pyrantel pamoate is readily available over-the-counter in most pharmacies in the USA and possesses anthelmintic activity exclusive to the gastrointestinal tract (GIT). Administering pyrantel pamoate immediately after exposure should theoretically paralyze the larvae in the GIT, causing the larvae to be expelled via peristalsis without entering the systemic circulation. In this study, pyrantel …

A Bayesian Hierarchical Approach For Modeling Virtual Species With Realistic Functional Trait Relationships, Sarah Bogen

All Graduate Plan B and other Reports, Spring 1920 to Spring 2023

Understanding the spatial and temporal dynamics of plant populations has important implications for the fields of ecology and conservation. A rich body of mathematical modeling approaches, including reaction-diffusion equations and integrodifference equations, have been developed to mechanistically model population spread based on species demography and seed dispersal characteristics. However, with over 390,000 plant species on Earth, it is not feasible to collect complete information on all species for the purpose of drawing generalized conclusions. One means of overcoming such a problem is through trait-based modeling, which seeks to represent realistic combinations of organismal traits rather than focusing on individual species. …

Development Of Graphical Models And Statistical Physics Motivated Approaches To Genomic Investigations, Yashwanth Lagisetty

Dissertations and Theses (Open Access)

Identifying genes involved in disease pathology has been a goal of genomic research since the early days of the field. However, as technology improves and the body of research grows, we are faced with more questions than answers. Among these is the pressing matter of our incomplete understanding of the genetic underpinnings of complex diseases. Many hypotheses offer explanations as to why direct and independent analyses of variants, as done in genome-wide association studies (GWAS), may not fully elucidate disease genetics. These range from pointing out flaws in statistical testing to invoking the complex dynamics of epigenetic processes. In the …

Chihuahuan Desert Rock Pool Community Assemblages: Patterns Of Taxonomic Diversity, Joseph Lee Mcdaniel

Open Access Theses & Dissertations

As climate change continues to become more prevalent, increasing temperatures and altering precipitation patterns will disrupt the environmental balance of ecosystems and spark the imminent threat of a 6th mass extinction event. Many researchers believe this has already begun, as losses for numerous taxonomic clades have been well documented; however, the loss of invertebrates is still unknown and may be much more severe than those of other animal clades. A significant factor contributing to the shortfall of invertebrate biodiversity loss is rooted in the lack of understanding of the diversity and distribution of these animals. There is still much to …

Hiding In Plain Sight: Accounting For Rate Heterogeneity In Trait Evolution Models, James Boyko

Graduate Theses and Dissertations

Within the last four decades, phylogenetic comparative methods have become the defacto method of analysis for comparative biologists. The availability of high-quality comparative datasets has been matched by an explosion of possible phylogenetic models. In large part, the efforts to increase the realism of phylogenetic comparative methods has been successful as evidenced by their widespread use. To this extensive literature, my contributions are modest. I have focused my dissertation work on two main themes. First, most phenotypic evolution is not independent of other phenotypes. Changes in a particular character may influence changes in another and modeling these characters in isolation …

Conservation Genetics Of A Declining Bumble Bee In Western North America; The Influence Of Geography, Dispersal Limitation, And Anthopogenic Activity, Ashley T. Rohde

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Conservation biology addresses the problem of species loss by identifying species in need of protection. Conservation biology has subfields to address different aspects of biodiversity loss, including genetics and sociology. I used genetic approaches to assess the conservation status of western bumble bees, a bumble bee species of conservation concern.

The western bumble bee is a bumble bee species that ranges from Alaska to New Mexico and as far east as Wyoming and Colorado. This species is disappearing in some places. It may soon be listed as endangered in the United States and is already listed as endangered in parts …

Conservation Of Open-Canopy-Associated Wildlife: Multi-Scale Management Impacts On Imperiled Herpetofauna, Ethan Joseph Royal

Graduate Theses and Dissertations

The loss of open-canopy ecosystems throughout North America has precipitated declines in reptile and amphibian species associated with these habitat types. Current efforts to restore open-canopy ecosystems are underway in many areas, but the local distributions of, habitat characteristics required by and the effects of management actions on many herpetofauna species are poorly understood or entirely unknown. Research examining relationships among herpetofauna and their environments is often complicated by the extremely low detectability seen in many studies. We used landscape-scale, assemblage-level surveys to investigate the occupancy patterns and habitat associations of open-canopy-associated herpetofauna in two regions, as well as gain …

Competing Behaviors Of Thermoregulation And Ambush Foraging In The Timber Rattlesnake (Crotalus Horridus Horridus): A Mechanistic Assessment Of Thermal Conduction, Larry K. Kamees

Graduate Theses and Dissertations

The interaction between the biophysical environment and ectotherm morphology elicits behaviors designed to maintain internal body temperature (Tb) within a range that promotes physiological functions. The short-term requirements of mass (energy requirements) and heat balance are subject to tradeoffs imposed by the organisms current physiological (heat and mass budgets) and environmental (biophysical, demographic, social, and predation) constraints and available resources. In temperate forests, extreme temperatures are common in summer even with intermittent sun exposure due to dense canopy cover. In Spring and Fall, temperatures can range from below freezing to 35 ℃ in 24 hrs. An ambush predator like the …

Current Ecotoxicity Testing Needs Among Selected U.S. Federal Agencies, Patricia Ceger, Natalia Garcia-Reyero Vinas, David Allen, Elyssa Arnold, Raanan Bloom, Jennifer C. Brennan, Carol Clarke, Karen Eisenreich, Kellie Fay, Jonathan Hamm, Paula F.P. Henry, Katherine E. Horak, Wesley Hunter, Donna Judkins, Patrice Klein, Nicole Kleinstreuer, Kara Koehrn, Carlie A. Lalone, James P. Laurenson, Jessica K. Leet, Anna Lowit, Scott G. Lynn, Teresa Norberg-King, Edward J. Perkins, Elijah J. Petersen, Barnett A. Rattner, Catherine S. Sprankle, Thomas Steeger, Jim E. Warren, Sarah Winfield, Edward Odenkirchen

United States Department of Agriculture Wildlife Services: Staff Publications

U.S. regulatory and research agencies use ecotoxicity test data to assess the hazards associated with substances that may be released into the environment, including but not limited to industrial chemicals, pharmaceuticals, pesticides, food additives, and color additives. These data are used to conduct hazard assessments and evaluate potential risks to aquatic life (e.g., invertebrates, fish), birds, wildlife species, or the environment. To identify opportunities for regulatory uses of non-animal replacements for ecotoxicity tests, the needs and uses for data from tests utilizing animals must first be clarified. Accordingly, the objective of this review was to identify the ecotoxicity test data …

Defining An Epidemiological Landscape That Connects Movement Ecology To Pathogen Transmission And Pace-Of-Life, Kezia Manlove, Mark Wilber, Lauren White, Guillaume Bastille-Rousseau, Anni Yang, Marie L.J. Gilbertson, Meggan E. Craft, Paul C. Cross, George Wittemyer, Kim M. Pepin

United States Department of Agriculture Wildlife Services: Staff Publications

Pathogen transmission depends on host density, mobility and contact. These components emerge from host and pathogen movements that themselves arise through interactions with the surrounding environment. The environment, the emergent host and pathogen movements, and the subsequent patterns of density, mobility and contact form an ‘epidemiological landscape’ connecting the environment to specific locations where transmissions occur. Conventionally, the epidemiological landscape has been described in terms of the geographical coordinates where hosts or pathogens are located. We advocate for an alternative approach that relates those locations to attributes of the local environment. Environmental descriptions can strengthen epidemiological forecasts by allowing for …

Population Genetics Of Two Sympatric Species, The Round-Tailed Horned Lizard (Phrynosoma Modestum) And The Greater Earless Lizard (Cophosaurus Texanus), In The Indio Mountains Of West Texas, Logan Miles Horne

Open Access Theses & Dissertations

Population genetics of two sympatric species, the round-tailed horned lizard (phrynosoma modestum) and the greater earless lizard (cophosaurus texanus), in the Indio mountains of West Texas.