Ecology and Evolutionary Biology Commons^™

Assessing Prevalence Of Blood Parasites And Ranaviruses In Hong Kong Freshwater Turtles, Julia Leung

Lingnan Theses (MPhil & PhD)

Blood parasites and ranaviruses are pathogens that impact freshwater turtles worldwide. Given that native turtle species in Hong Kong are already at a high risk of extinction, their survival becomes even more threatened in the event of a disease outbreak. However, prevalence of these pathogens among the native population in Hong Kong remains unstudied.

In this study, I aim to (1) obtain baseline prevalence data of blood parasites and ranaviruses in Hong Kong freshwater turtles, (2) compare different methods for detecting blood parasites and ranaviruses, (3) evaluate the applicability of using blood parasites as a wildlife forensic tool, assess and …

Root Lesion And Burrowing Nematodes And Their Management, Department Of Primary Industries And Regional Development, Western Australia

Grains and other field crops factsheets

Nematodes are common soil pests that feed on the roots of a wide range of crops in all agricultural areas of Western Australia, resulting in significant crop yield loss. Root lesion nematode can be managed but not eradicated.

This factsheet summarises the biology of the root lesion nematode (RLN, Pratylenchus spp.) and burrowing nematode (Radopholus spp.) species that damage Western Australian (WA) crops, and their diagnosis and management.

Population Genetic Diversity In Two Biological Systems, Alyson Emery

Electronic Theses and Dissertations

Population genetic analysis can be used to answer questions about population structure and composition in many biological systems. Recent improvements to sequencing technologies have made population genetic studies more accessible than ever before. Many of the same techniques can be applied to different biological systems, but some analyses may differ depending on how genetically divergent the populations in question are. Here, we describe two unique projects using next-generation genome sequencing, each looking at population structure at different levels of genetic divergence: the first involved determining interspecific population structure between two species of hybridizing field cricket using a novel sequencing method, …

Chinese Tallow Long-Term Impact On Stand Dynamics In A Bottomland Hardwood Forest Following Vegetation Management, Nicklaus R. Langlois

Electronic Theses and Dissertations

Chinese tallow (Triadica sebifera (L.) Small) is an invasive tree known to have negative impacts on bottomland hardwood forests. Chinese tallow is proficient in reproducing and surviving in bottomland hardwood forests because it is more flood and shade tolerant than most native trees. The long-term effectiveness of Chinese tallow control is an important topic to research as only a few long-term studies of Chinese tallow control have been conducted. A 10-year re-measurement of 22 paired plots installed in 2012 on the Pineywoods Mitigation Bank near Diboll, Texas following herbicide treatments examined Chinese tallow and native tree stand structure. Each …

Effects Of A Protection Zone In A Reaction-Diffusion Model With Shifting Bounded Habitat And Allee Effect., Davis Henderson

Electronic Theses and Dissertations

We consider a reaction-diffusion equation that models a population in a shifting bounded habitat with a protection zone and the Allee effect. We assume that the population growth function exhibits the strong Allee effect and has a positive integral within the protection zone (indicating population persistence) and a negative integral in the surrounding patches (indicating population decay). We prove that the existence of steady-state solutions to this system depends on the length of the protection zone. It is demonstrated that there exists some value H* such that, for a protection zone of size H*, there exists a solution and, for …

Current Trends In Bee Conservation And Habitat Restoration In Different Types Of Anthropogenic Habitats, Olivia Kline, Neelendra K. Joshi

Entomology and Plant Pathology Faculty Publications and Presentations

Recent declines in bee populations and ranges have been cause for concern due to the valuable pollination service that they provide. Several factors have been proposed to contribute to these declines, including habitat loss, pathogen spread, and pesticide usage, so many pollinator conservation schemes have involved the addition of pollinator-friendly habitat through wildflower plantings and artificial nesting sites. Because of this, many efforts have been made to enhance bee populations across different landscape types, including natural, agricultural, urban, and industrial areas. Many of these schemes have focused on providing habitat for bees and other animal pollinators in agricultural landscapes, but …

Assessing The Invasive Clinging Jellyfish: Where Are All The Polyps?, Angela Chemidlin

Theses, Dissertations and Culminating Projects

Researching invasive species is vital to the health of ecosystems. Any invasion can place an ecosystem at risk of deterioration through increased competition with native species, food web changes, and community dynamic alterations. Clinging jellyfish (Gonionemus vertens) have recently emerged as a nuisance invader in New Jersey. They pose an additional threat to humans because they possess both paralysis venoms, which cause muscle seizures and intense pain, and neurotoxins that can cause neuropsychiatric symptoms. Jellyfish possess a complex life history involving sexually reproducing medusae and a cryptic asexual polyp stage. Medusae blooms occur during May and June, but locating their …

Unraveling Wetland Ecology: The Effect Of Abiotic Heterogeneity And Habitat Size On Wetland Plant Diversity In The Piedmont, Gregory T. Gilmore

All Theses

Ecosystems around the world are seeing an unprecedented decline in biodiversity. However, to better prevent this decline we cannot only understand the drivers of biodiversity loss, but also the factors that support diversity. Traditional ecological hypotheses such as the Habitat Heterogeneity Hypothesis (HHH) and the Theory of Island Biogeography (TIB) have provided frameworks for understanding biodiversity drivers. However, recent research suggests a more nuanced relationship between heterogeneity, habitat size, and diversity than previously thought. This study looks to bridge existing research gaps by examining the ecologically and conservational important habitat of wetlands. Specifically, the study focuses on the plant diversity …

Identifying New Potential Breeding Pond Sites For The Dusky Gopher Frog In Southern Mississippi, Shelbie Kellum

Master's Theses

The main objective of this thesis was to identify potential new pond sites across southern Mississippi for the critically endangered dusky gopher frog (DGF). Ephemeral ponds are the preferred breeding habitat for the species, but they are quite rare in the region due to the diminishment of the longleaf pine ecosystem. This research addresses gaps in the current literature by providing a broad overview of dusky gopher frog breeding habitat identification. LiDAR derived datasets as well as tools within ArcGIS Pro were utilized in order to perform spatial analysis on sites of interest in south Mississippi. By using this methodology …

Uvc And Planetary Habitability: Insights From Desert Lichens And Cyanobacteria, Tejinder Singh

UNLV Theses, Dissertations, Professional Papers, and Capstones

An important question in astrobiology is whether life can exist under the levels of UVC radiation found on Archean Earth, Mars, and exoplanets. We investigated this question by studying the UVC survival of colonial cyanobacterium and lichens that grow in harsh desert environments and possess natural sunscreens. We irradiated them nonstop in a desiccated state with a UVC flux closely representing the upper limit on those planets: 55-60 W/m². After irradiation, we rehydrated and assessed their survival using chlorophyll fluorometry and by counting the number of viable colonies that formed on agar plates. All three study organisms survived two to …

Effects Of Climate Change On (Semi)-Arid Ecosystems In The Southwestern United States, Charlotte Van Der Nagel

UNLV Theses, Dissertations, Professional Papers, and Capstones

Climate change is considered amongst the most severe threats to terrestrial and aquatic ecosystems globally. Ecosystems in the southwestern United States have specifically been impacted by intense drought conditions since 2000. Higher temperatures combined with altered precipitation stresses many ecosystems; however, ecosystem specific responses to such stressors may vary. Here, the effects of climate change on semi-arid ecosystems are analyzed for some of the most vulnerable ecosystems in the southwestern United States: lacustrine, riparian, and dryland ecosystems.

Lakes and reservoirs in arid environments often serve as drinking water sources and recreational areas where high water quality is essential. Climate change …

Phylogenetic And Biogeographic Patterns Of Devonian Proetid Trilobites, Katherine Jane Jordan

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Ecological disruption events such as mass extinctions can result in the permanent alteration in clades and ecosystems. A pivotal time of change during the history of life on Earth can be seen in the Devonian Period. During this time, major transitions in marine and terrestrial system resulted in a different world at the end of the period in comparison to the beginning. One such group most heavily impacted were trilobites. Trilobites were reduced to one order by the end of the Devonian: Proetida. My dissertation focuses on phylogenetic, biogeographic, and paleocommunity patterns of this group, known as the last of …

Populations Of The Stygobiotic Amphipod Palearcticarellus Pusillus (Martynov, 1930) Maintain Genetic Connectivity Between The Mountain Springs And The Deep Bottom Habitats Of Lake Teletskoye (Altai Mountains, Russia), Ivan Marin, Liubov Yanygina, Svetlana Ostroukhova, Dmitry Palatov

International Journal of Speleology

The diversity of underground fauna is often associated with the presence of karst areas, which have extensive underground cavities and connecting channels. Non-karst areas, however, make up a larger portion of the planet’ surface, and our understanding of the distribution and dispersal abilities of underground fauna in these areas currently remains limited. During a recent study of the diversity of stygobiotic crustaceans in the mountain streams of the Kurai Mountain Range (Altai, Russia), a small-sized species of crangonyctid amphipod, Palearcticarellus pusillus (Crustacea, Amphipoda, Crangonyctidae) was found in high-altitude springs. This species has been previously known only from deep-water habitats in …

Microplastic Accumulation In The Marsh Periwinkle (Littoraria Irrorata), Sarah Keaton, Hannah Lukhard, Eli Windy, Manar Hasan

DePaul Discoveries

Contamination of oceans by microplastics (mm) currently poses a major threat to aquatic and terrestrial ecosystems worldwide. Recent attention towards this issue has raised questions about the extent to which microplastics have accumulated in the environment, and has led to an increase in studies on the effects of microplastics in various organisms. However, levels of contamination in protected natural areas are still largely unexplored, yet can offer an important empirical perspective on the issue. In addition, little is known about the potential effects of microplastics on behavior in the field. This research was conducted within the protected ACE Basin National …

Postweaning Skull Growth In Living Didelphid Marsupials: The Case Of Gracilinanus Agilis And Cryptonanus Chacoensis, Iveth A. Villalobos Guerrero, Noé U. De La Sancha

DePaul Discoveries

Ontogeny is described as the history of an organism through its lifetime including development, growth, and allometry. The ontogenetic approach in cranial dimensions has proved useful in interpreting evolutionary patterns. Among the largest Didelphidae family of Neotropical marsupials, the species of Gracilinanus agilis and Cryptonanus chacoensis are poorly known. In this study, we address three questions; Is there sexual dimorphism in these species? What is the pattern of allometry? Which allometric patterns best describe the patterns in the skull and mandible? We applied geometric morphometrics to describe and test these differences using MorphoJ. A discriminant function analysis was performed to …

National Parks Field Journal, Isadora Davis

Art and Design Student Scholarship and Projects

A handwritten, richly illustrated field journal by Binghamton University art major Isadora Davis, recording a trip through national parks in the American West via SUNY Broome's BIO 217: Ecology of National Parks. Davis uses colored pencil drawings and pressed botanical specimens to record landscapes, birds, mammals, and plant life in Grand Teton, Yellowstone, Wind Cave, and Badlands National Parks, as well as Custer State Park. Davis's sketches and diagrams visually explore how to decode past landscapes from current formations, while her written entries explain species diversity, animal behavior, and the mechanisms causing geological formations and geothermal events. Part memoir of …

Spatial Ecology Of Mountain Lions Throughout Their Distribution In California, Kyle D. Dougherty

School of Natural Resources: Dissertations, Theses, and Student Research

Mountain lions (Puma concolor) have been studied extensively throughout their wide geographic distribution in the Western Hemisphere, but most research has been conducted at relatively small spatial scales. We used GPS telemetry data contributed by researchers in 16 study areas throughout California to advance understanding of mountain lion spatial ecology. First, we investigated multi-scale resource selection of mountain lions relative to spatially varying risk of intentional human-caused mortality associated with livestock depredation management. We show that individuals that proactively avoided mortality risk when selecting home ranges were able to relax their avoidance of risk when making resource selection …

Hybridization Between The Rare Gray-Headed Chickadee And The Abundant Boreal Chickadee In The Midst Of Shifting Climate, Matthew R. Armstrong

School of Natural Resources: Dissertations, Theses, and Student Research

As species respond to changing climate, distributions and abundances may shift and alter species interactions. Hybridization, a relatively widespread phenomenon becoming more common with climate change, can have beneficial and detrimental effects on population growth rates and genetic integrity. Beneficial effects due to the introduction of advantageous alleles and increased genetic diversity may result from hybridization. Species may also accrue fitness costs associated with changing climates if mismatches occur between environmental variables and phenotypes. The gray-headed chickadee, Poecile cinctus lathami, is an extremely rare songbird that has experienced marked declines in recent decades within its restricted distribution in Alaska …

New Insights On Hybridization In Potamogeton Floridanus (The Florida Pondweed), Kaitlyn R. Sampson

Graduate Theses and Dissertations (2019 - present)

Freshwater ecosystems are some of the most important and highest threatened habitats in the world, and aquatic plants play an important, but often-overlooked, role in maintaining them. Potamogeton is a diverse and ecologically important aquatic plant genus well known for taxonomic difficulty and rampant hybridization. lbis study aimed to 1) test the hypothesis that Potamogeton jloridanus (Florida pondweed) is a hybrid between P. oakesianus and P. pulcher, and 2) to investigate correlations in ecological conditions for the focal species. This study revealed the discovery of a new population of P. jloridanus in Big Coldwater Creek in Santa Rosa Co., FL, …

The Ecological Applications Of Δ17O: Validating A Novel Technique For Assessing Animal Metabolism And Water Intake, Zachary Taylor Steele

Biological Sciences Theses & Dissertations

Animals obtain water via different processes such as drinking, consuming food, and through metabolic processes like at the end of the electron transport chain when atmospheric oxygen is combined with hydrogen to form ‘cytochrome oxidase water’. Assessing animal water flux and metabolism has mainly been conducted via stable isotope analysis (SIA) of biological samples using hydrogen (²H) and oxygen isotopes (¹⁶O, ¹⁷O, and ¹⁸O; Δ¹⁷O), typically using enriched isotope tracers. However, natural abundance isotope modeling offers an approach for conducting SIA of biological samples that differs because it relies on the unique, …

The Ecosystem As Super-Organ/Ism, Revisited: Scaling Hydraulics To Forests Under Climate Change, Jeffrey D. Wood, Matteo Detto, Marvin Browne, Nathan J.B. Kraft, Alexandra G. Konings, Joshua B. Fisher, Gregory R. Quetin, Anna T. Trugman, Troy S. Magney, Camila D. Medeiros, Nidhi Vinod, Thomas N. Buckley, Lawren Sack

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Classic debates in community ecology focused on the complexities of considering an ecosystem as a super-organ or organism. New consideration of such perspectives could clarify mechanisms underlying the dynamics of forest carbon dioxide (CO₂) uptake and water vapor loss, important for predicting and managing the future of Earth's ecosystems and climate system. Here, we provide a rubric for considering ecosystem traits as aggregated, systemic, or emergent, i.e., representing the ecosystem as an aggregate of its individuals, or as a metaphorical or literal super-organ or organism. We review recent approaches to scaling-up plant water relations (hydraulics) concepts developed for …

The Polyaneuploid Cancer Cell State And Therapeutic Resistance: Eco-Evolutionary Dynamics In Structured Populations, Anuraag Bukkuri

USF Tampa Graduate Theses and Dissertations

In this dissertation, I develop and apply eco-evolutionary modeling techniques to understand how the polyaneuploid cancer cell (PACC) state, entered when aneuploid cells exit the cell cycle after S phase and undergo a whole genome duplication, contributes to therapeutic resistance. Since resistance remains one of the primary causes of treatment failure in cancer patients, it is critical to understand how such demographic state transitions allow for acclimatization of cancer cells to therapeutic stressors and how they interact with evolutionary processes to promote irreversible resistance.

In Chapters Two and Three, I lay the foundation for this work. In Chapter Two, I …

Listening For Lemurs: Translating Black-And-White Ruffed Lemur (Varecia Variegata) Vocalizations Into Conservation Insights Through Acoustic Monitoring, Carly H. Batist

Dissertations, Theses, and Capstone Projects

The field of bioacoustic monitoring has undergone a significant evolution in recent years, driven by technological innovations that have revolutionized how researchers study animal vocalizations. Traditionally, bioacoustics was rooted in active acoustic monitoring (AAM), involving human observers using recorders in the field to study animal sounds and understand species' vocal communication. However, the emergence of passive acoustic monitoring (PAM) has introduced a new complementary approach, utilizing specialized recorders placed in ecosystems to autonomously capture sounds at wide spatial and temporal scales. My dissertation adopts a translational approach to bioacoustic monitoring, integrating both AAM and PAM techniques to study and survey …

Internet-Based Data Platforms Re-Define The Distributions Of Some Large Crabronid Wasps In Arkansas (Hymenoptera: Crabronidae), David E. Bowles

Insecta Mundi

The geographic distributions of three large wasps, Sphecius speciosus (Drury), Stictia carolina Fabricius, and Stizus brevipennis Walsh (Hymenoptera: Crabronidae), occurring in Arkansas are defined using museum specimens and three internet-based data platforms. The internet-based data platforms generally provided more county location records than museum records. Using data from internet sources for easily identified species can better serve to illustrate the known distributions for some species thus making for a powerful tool elucidating distributional patterns and conservation planning.

ZooBank registration. urn:lsid:zoobank.org:pub:DCAE9192-1765-40CD-952B-0A094F413991

Morphometric Analysis And Taxonomic Re-Evaluation Of Pepsis Cerberus Lucas And P. Elegans Lepeletier (Hymenoptera: Pompilidae: Pepsinae: Pepsini), Frank E. Kurczewski, Akira Shimizu, Diane H. Kiernan

Insecta Mundi

Hurd (1952) separated Pepsis cerberus Lucas from P. elegans Lepeletier (Hymenoptera: Pompilidae: Pepsinae: Pepsini) based on external morphology and biogeography. Vardy (2005) synonymized the familiar and historically well-documented P. cerberus and P. elegans, combining these Nearctic taxa with several Neotropical variants in an extremely broad definition of P. menechma Lepeletier. In doing so, Vardy (2005) breached the principle of nomenclatural stability. He ignored the prevailing usage and clearly violated articles 23.2, 23.3 and 23.9.1.2 of the ICZN (1999). Morphological differences, ecological divergence, and narrow sympatric geographic distribution of P. cerberus and P. elegans …

Estimating Increased Transient Water Storage With Increases In Beaver Dam Activity, Konrad Hafen, Joseph M. Wheaton, Brett B. Roper, Philip Bailey, William W. Macfarlane, Bethany T. Neilson, Christopher J. Tennant

Watershed Sciences Faculty Publications

Dam building by beaver (Castor spp.) slows water movement through montane valleys, increasing transient water storage and the diversity of residence times. In some cases, water storage created by beaver dam construction is correlated to changes in streamflow magnitude and timing. However, the total amount of additional surface and groundwater storage that beaver dams may create (and, thus, their maximum potential impact on streamflow) has not been contextualized in the water balance of larger river basins. We estimate the potential transient water storage increases that could be created at 5, 25, 50, and 100% of maximum modeled beaver dam capacity …

From Pixels To Plants: Remote Sensing Of California Invasive Plants, Kenneth Rangel

Master's Projects and Capstones

Invasive plants cause significant impacts to ecosystems, the economy, and human health. California has experienced significant plant invasions and is well suited to future invasion because of its Mediterranean climate and human disturbance. Eradication or control of invasive plant species requires a detailed understanding of their spatial distribution, which typically involves on the ground surveys that can be expensive or inconsistent. Remote sensing offers a potential alternative or supplement to in-person invasive plant mapping. This study performed a comparative analysis of 41 remote sensing studies that mapped the distribution of California invasive plants. I found that while high spectral resolution …

Multi-Type Branching Processes In Time-Varying Environments, Arash Jamshidpey

Biology and Medicine Through Mathematics Conference

No abstract provided.

Exploring The Evolution Of Altruistic Punishment Using A Pde Model For Multilevel Selection, Daniel Cooney

Biology and Medicine Through Mathematics Conference

No abstract provided.

Mathematically Modeling Stoichiometric Drivers Of Nitrogen Fixation, Rebecca Everett, Corday Selden, Mohamed Hatha Abdulla, Jabir Thajudeen, James Powell, Edwin Cruz-Rivera, Luca Schenone, Renn Schipper, Megan Berberich, Halvor Halvorson, Robinson Fulweiler, Amy Marcarelli, Thad Scott

Biology and Medicine Through Mathematics Conference

No abstract provided.