Ecology and Evolutionary Biology Commons^™

Common Ravens Disrupt Greater Sage-Grouse Lekking Behavior In The Great Basin, Usa, Joseph L. Atkinson, Peter S. Coates, Brianne E. Brussee, Ian A. Dwight, Mark A. Ricca, Pat J. Jackson

Human–Wildlife Interactions

Expansion of human enterprise has contributed to increased abundance and distribution of common ravens (Corvus corax; ravens) across sagebrush (Artemisia spp.) ecosystems within western North America. Ravens are highly effective nest predators of greater sage-grouse (Centrocercus urophasianus; sage-grouse), a species of high conservation concern. Sage-grouse population trends are estimated using count survey data of males attending traditional breeding grounds, known as leks. We sought to investigate associations of ravens to sage-grouse lek sites and document interactions between the sage-grouse and ravens as well as those between sage-grouse and other animals observed around leks. First, we …

Monograph Reduced Box Price: Managing Human–Deer Conflicts

Human–Wildlife Interactions

Order form for HWI monograph, Methods for Managing Human–Deer Conflicts in Urban, Suburban, and Exurban Areas. This monograph identifies challenges and benefits associated with many human–deer conflict mitigation actions as well as methods to monitor the response of deer populations to management actions. Deer exploit urban, suburban, and exurban areas where human populations provide anthropogenic attractants, either intentionally or inadvertently, which often leads to human–deer conflicts. Mitigating actions have varying degrees of efficacy and may not be effective or accepted in every situation. Wildlife and municipal managers must work together to seek methods to reduce attractants, mitigate conflicts, and perpetuate …

Phenotypic Characterization Of Table Mountain (Pinus Pungens) And Pitch Pine (Pinus Rigida) Hybrids Along An Elevational Gradient In The Blue Ridge Mountains, Virginia, Alexander L. Brown

Theses and Dissertations

Hybridization has played a long-standing role in the evolution of both plant and animal species and allows for the sharing of genetic information between lineages. Here, potential hybridization of a species endemic to the Appalachian Mountains, Table Mountain pine (Pinus pungens), and pitch pine (Pinus rigida) was investigated along an elevational gradient, through the use of phenotypic measurements: cone length, cone width, and needle length. Phenotypes were used to identify hybrids in a three-tiered elevational sampling method at two sites in Shenandoah National Park with the use of linear discriminant analysis. It was found that hybridization …

Do Beaver Dam Analogues Act As Passage Barriers To Juvenile Coho Salmon And Juvenile Steelhead Trout?, Christopher G. O'Keefe

Cal Poly Humboldt theses and projects

In the Pacific Northwest, the human-caused reduction of quality and quantity of freshwater rearing habitat is a limiting factor for Pacific Salmon populations. Beaver dam analogues (BDAs) increase suitable rearing habitat for juvenile salmonids and promote the restoration of critical stream processes. Installing BDAs is an increasingly popular alternative to more intensive restoration techniques, due to the relatively low cost and effort required to install BDA structures. However, widespread installation of BDAs has been slowed by regulatory agencies’ concerns that BDAs may impede fish passage. Few studies have empirically assessed the extent to which BDAs impede fish passage, and no …

Determining Environmental Changes Using Time Lapse Photography, Emily Lemasters

Williams Honors College, Honors Research Projects

This paper aims to use photographs throughout several years to observe, examine, and make conclusions on changes occurring at different areas of the Bath Nature Preserve. Throughout the years 2013-2021, photographs have been captured at roughly the same angle at multiple locations in the preserve. These photographs will be placed into a time lapse video and examined to physically see how the environment is changing. Changes to the environment could be natural or as a result of outside factors. By examining these changes, it can be determined if alterations need to be made to help the environment thrive. Two specific …

The Mechanisms And Consequences Of Shrub Encroachment On The Virginia Barrier Islands, Lauren K. Wood

Theses and Dissertations

Shrub encroachment is a global phenomenon driven by direct and indirect anthropogenic influence which alters plant communities and ecosystem function. Many studies have investigated drivers and consequences of woody plant establishment, but mesic landscapes are underrepresented in the literature. My objective was to assess the mechanisms of Morella cerifera encroachment into coastal mesic grassland, the potential for self-reinforcement, and consequences on community composition, nutrients, and landscape productivity. I studied temperature and water microclimate modification by Morella cerifera presence and removal to understand ecosystem engineering and community composition changes. Additionally, I examined the influence of shrubs on surrounding grassland species traits …

Use Of Redwood Basal Hollows By Bats: A Focus On The Townsend's Big-Eared Bat On The North Coast Of California, Amon Jotesh Armstrong

Cal Poly Humboldt theses and projects

Loss of roosting resources, either through disturbance or removal, negatively affects bats. For sensitive species, such as the Townsend’s big-eared bat (Corynorhinus townsendii), determining roost requirements is a critical component in conserving their habitat. Such cavity roosting bats on the North Coast of California may use hollows in large redwood trees. In this study, I examined the factors determining the use of basal tree hollows by different bat species at eight redwood forest sites in Del Norte, Humboldt, and Mendocino Counties, California. Bat guano was collected from 179 basal hollow roosts from 2017 to 2018, and guano mass …

Jaguars And Pumas Exhibit Distinct Spatiotemporal Responses To Human Disturbances In Colombia’S Most Imperiled Ecoregion, Joe J. Figel, Sebastián Botero-Cañola, Juan David Sánchez-Londoño, Javier Racero-Casarrubia

University of Nebraska State Museum: Mammalogy Papers

Abstract

Coexistence of sympatric felids is facilitated by mutual avoidance and the partitioning of habitats, prey, and time. Anthropogenic disturbances disrupt this coexistence in fragmented landscapes, potentially triggering cascading influences in ecological communities. We used photographic data from 8,717 trap nights (November 2014–June 2016) at 87 camera trap sites in Colombia’s middle Magdalena River basin to compare spatiotemporal overlap among jaguars (Panthera onca), pumas (Puma concolor), their prey, and humans, at sites of high and low disturbance, as determined by the human influence index. Human disturbance events (e.g. domestic dogs, livestock, and humans, including armed hunters) …

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Occurrence, Resource Use, And Demography Of The Common Raven In North America: A Research Synthesis, William C. Webb, Peter S. Coates, Seth J. Dettenmaier, David J. Delehanty

Human–Wildlife Interactions

We reviewed the scientific literature to inventory existing studies of common raven (Corvus corax; raven) ecology in western North America. We conducted an intial literature review between June 2015 and March 2018. Prior to completing our review, we revisited the published literature for any additional relevant studies in July 2021. Our goal was to identify knowledge gaps and to synthesize the current understanding of environmental features that may support raven populations that pose general threats to biodiversity and sensitive species in particular. We focused our review on studies with direct conservation applications related to 3 processes of raven …

Common Raven Impacts On The Productivity Of A Small Breeding Population Of Snowy Plovers, Matthew J. Lau, Benjamin H. Becker, David T. Press

Human–Wildlife Interactions

Common ravens (ravens; Corvus corax), an adaptable, synanthropic generalist, have thrived coincident with increasing human landscape modifications and fragmentation, consequently affecting their prey, which are often sensitive native and protected species. Ravens are a conservation concern for the protected western snowy plover (plover; Charadrius nivosus nivosus), causing low nest and chick survival in some breeding areas along the Pacific coast of North America. We used a long-term dataset from a breeding snowy plover monitoring program in Point Reyes National Seashore (PRNS) to investigate potential impacts of ravens on snowy plover nest and fledging success. Between 2002 and 2020, …

A Desert Tortoise–Common Raven Viable Conflict Threshold, Kerry L. Holcomb, Peter S. Coates, Brian G. Prochazka, Timothy Shields, William I. Boarman

Human–Wildlife Interactions

Since 1966, common raven (Corvus corax; raven) abundance has increased throughout much of this species’ Holarctic distribution, fueled by an ever-expanding supply of anthropogenic resource subsidies (e.g., water, food, shelter, and nesting substrate) to ecoregion specific raven population carrying capacities. Consequently, ravens are implicated in declines of both avian and reptilian species of conservation concern, including the California (USA) endangered and federally threatened Mojave desert tortoise (Gopherus agassizii; desert tortoise). While ravens are a natural predator of desert tortoises, the inter-generational stability of desert tortoise populations is expected to be compromised as annual juvenile survival is …

A Rapid Assessment Function To Estimate Common Raven Population Densities: Implications For Targeted Management, Brianne E. Brussee, Peter S. Coates, Shawn T. O'Neil, Seth J. Dettenmaier, Pat J. Jackson, Kristy B. Howe, David Delehanty

Human–Wildlife Interactions

Common raven (Corvus corax; raven) populations have increased over the past 5 decades within the western United States. Raven population increases have been largely attributed to growing resource subsidies from expansion of human enterprise. Concomitantly, managers are becoming increasingly concerned about elevated adverse effects on multiple sensitive prey species, damage to livestock and agriculture, and human safety. Managers could benefit from a rapid but reliable method to estimate raven densities across spatiotemporal scales to monitor raven populations more efficiently and inform targeted and adaptive management frameworks. However, obtaining estimates of raven density is data- and resource-intensive, which renders …

A Novel Technique To Improve Capture Success Of Common Ravens, Lindsey R. Perry, Terrah M. Owens, Zachary T. Slick, Jimmy D. Taylor, Jonathan B. Dinkins

Human–Wildlife Interactions

Traditional trapping techniques for common ravens (Corvus corax; raven) require significant effort, often produce low capture rates, and cannot be used in some situations. We designed a 3-m noose pole to secure ravens from nocturnal roost locations while using a strobe spotlight to temporarily disorient them. We collected measures of trapping efficiency and contrasted them with padded leghold traps also used in the study. We effectively implemented our noose pole method in July and August of 2018, 2019, and 2020 in the Baker and Cow Lakes sage-grouse (Centrocercus urophasianus) Priority Areas of Conservation in eastern Oregon, …

Efficacy Of Manipulating Reproduction Of Common Ravens To Conserve Sensitive Prey Species: Three Case Studies, Corina A. Sanchez, Brianne E. Brussee, Peter S. Coates, Kerry L. Holcomb, Seth M. Harju, Timothy A. Shields, Mercy Vaughn, Brian G. Prochazka, Steven R. Mathews, Steffen Cornell, Chad V. Olson, David J. Delehanty

Human–Wildlife Interactions

Expansion of human enterprise across western North America has resulted in an increase in availability of anthropogenic resource subsidies for generalist species. This has led to increases in generalists’ population numbers across landscapes that were previously less suitable for their current demographic rates. Of particular concern are growing populations of common ravens (Corvus corax; ravens), because predation by ravens is linked to population declines of sensitive species. Ecosystem managers seek management options for mitigating the adverse effects of raven predation where unsustainable predator–prey conflicts exist. We present 3 case studies examining how manipulating reproductive success of ravens influences …

The Relative Contribution Of The Blue Crab (Callinectes Sapidus) To Periwinkle Snail (Littoraria Irrorata) Predation Mortality In The Lower Salt Marsh Intertidal Of Northeast Florida, Amanda Paige Small

UNF Graduate Theses and Dissertations

In top-down regulation of ecological communities, predation of grazers is critical for maintaining the presence and growth of essential vegetation. The periwinkle snail (Littoraria irrorata) is a ubiquitous grazer in Atlantic salt marshes that can defoliate patches of Spartina alterniflora when populations are extremely dense. On the east coast of Florida, multiple predators could contribute to periwinkle population control maintaining this critical habitat. This study aimed to determine if the blue crab (Callinectes sapidus) is the primary predator of periwinkle snails in the salt marsh lower intertidal. Tethering was utilized to assess if periwinkle mortality is …

Benthic Microalgae Response To A Warming Climate And Shift In Foundational Vegetation Species In A Saltmarsh-Mangrove Ecotone, Gabriela Canas

UNF Graduate Theses and Dissertations

The ecotone in Northeast Florida is experiencing rapid change as mangroves begin to encroach northward into saltmarsh dominated coastal wetlands. This is especially prevalent within the boundaries of the Guana Tolomato Matanzas National Estuarine Research Reserve where studies are attempting to understand the consequences of more mangroves. Although we are beginning to understand some of the implications of this shift in dominant vegetation, the true effects and the accompanying sustained climatic warming effects on the resilience of wetland habitats and their associated communities remains unknown. Primary producers such as benthic microalgae (BMA) are important food sources in both mangrove and …

Applications Of Machine Learning In Microbial Forensics, Ryan B. Ghannam

Dissertations, Master's Theses and Master's Reports

Microbial ecosystems are complex, with hundreds of members interacting with each other and the environment. The intricate and hidden behaviors underlying these interactions make research questions challenging – but can be better understood through machine learning. However, most machine learning that is used in microbiome work is a black box form of investigation, where accurate predictions can be made, but the inner logic behind what is driving prediction is hidden behind nontransparent layers of complexity.

Accordingly, the goal of this dissertation is to provide an interpretable and in-depth machine learning approach to investigate microbial biogeography and to use micro-organisms as …

Monitoring The Wetland Landscape: White-Faced Ibis (Plegadis Chihi) Breeding Habitat As A Model Assemblage, Shea P. Coons

Graduate Student Theses, Dissertations, & Professional Papers

Wetlands structure landscape biodiversity by providing critical habitat to numerous fish and wildlife species. However, climate change, growing human populations, and shifting land use practices strain limited water supplies that sustain wetlands in the semi-arid western US. Conserving a wetland network with prominent value to wildlife is paramount to ensure future security of habitat and ecosystem processes. Here, I use white-faced ibis (Plegadis chihi; hereafter ‘ibis’) breeding colonies as a model system to identify and monitor a landscape-scale wetland network across the semi-arid western US. Ibis serve an important role in marking ecologically important wetland networks because they require a …

Variation In Personality Among Semi-Wild Myanmar Timber Elephants, Sateesh Venkatesh

Theses and Dissertations

This study examines two personality traits: exploration and neophobia, which could influence human-elephant conflicts. Thirty-one semi-wild elephants were tested over two trials using a custom novel puzzle tube containing three tasks and three rewards. Our studies show that elephants do vary significantly between individuals in both exploration and neophobia.

Characterizing Patterns In Texas Gulf Coast Beach Dune Plant Species Composition, Cody Foster

Electronic Theses and Dissertations

Regional vegetation patterns of Texas beach plant communities were analyzed using cluster analysis, ANOSIM, SIMPER, NMDS, and ISA for fives zones representing the foredune complex of twenty Gulf Coast beaches. ANOVA revealed that zones differ in terms of percent bare sand, percent vegetative cover, and species richness. Cluster Analysis, ANOSIM, and SIMPER results indicate that Texas beaches can be divided into northern and southern regions based on differences in species composition of plant communities. Indicator Species Analysis (ISA) indicates that northern beaches are characterized by the presence of Rayjacksonia phyllocephala, Ambrosia Strophostyles, Ambrosia psilostachya, and Panicum amarum …

Blenny Territoriality At Oyster Landing, North Inlet Estuary, South Carolina: Seasonal Patterns And Ecological Factors, Sydney Davis, Juliana Harding

Honors Theses

Temperate oyster reef blennies use oyster shells that are still articulated as habitat year round. During the breeding season when water temperatures are > 18-20°C, many species of blenny males use the oyster valves as nesting sites. Male blennies exhibit territorial behavior when guarding their nesting sites and can interact differently with conspecific and transient species. Striped blenny (Chasmodes bosquianus) and freckled blenny (Hypsoblennius ionthas) behavior was described from April 2020 to August 2020 at Oyster Landing, North Inlet estuary, South Carolina to quantify typical blenny behavior, general presence or absence of residents, and potential environmental parameters …

An Examination Of The Influence Of Multi-Scale Processes And Connectivity On The Population And Assemblage Dynamics Of Headwater Fishes, Josh P. Hubbell

Dissertations

Typified by their branching pattern, headwaters are numerically abundant as the density of these habitats increases with increasing distance from the base of a dendritic river system. Connectivity among headwaters is complex, resulting in the spatial isolation of populations. Headwater specialists have evolved a suite of traits that permit these species to permanently reside within these habitats. The spatial configuration and connectivity of headwaters has repercussions for metapopulations and meta-assemblages. I investigated how multi-scale processes and connectivity influenced the patch occupancy, coexistence, movement ecology, population structure, and gene flow of headwater specialists. In chapter two, I used occupancy modeling to …

Population Structure Of A Federally Endangered Plant (Astragalus Jaegerianus Munz, Fabaceae) With Limited Range Using Microsatellites, Sueann Neal

Electronic Theses, Projects, and Dissertations

Studies on population genetics examine the relationship and effects of population structure, migration, gene flow and demographic history, and are therefore important in the conservation of endangered species. Astragalus jaegerianus, a critically federally endangered species found in a geographically restricted range is investigated to determine population structure and genetic variation. Previous research on A. jaegerianus focused on DNA sequence data for cpDNA and nrDNA showed no variation. Further research on A. jaegerianus utilizing AFLP’s on the whole genome indicated substantial gene diversity and population structure consistent with geographically widespread species. AFLP research is a cost-effective process to identify levels …

Influences Of Forest Edges On The Growth And Health Of Old-Growth Coast Redwood Forests, Cody R. Dangerfield

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Coast redwood (Sequoia sempervirens) is the tallest species in the world, frequently attaining heights greater than 300 ft. The unique characteristics of the redwoods has led to the establishment of several preservation areas including national and state parks. However, abrupt forests edges created by previous logging and landcover changes has left the remaining stands exposed to elevated temperature, sunlight, and wind intensities, thereby making redwoods along the forest edge more susceptible to windthrow and drought stress. Despite the rarity of old-growth coast redwood forests and their ecological and cultural significance, very few studies have investigated how forests edges …

Introduction To Neutrosophic Genetics, Florentin Smarandache

Branch Mathematics and Statistics Faculty and Staff Publications

Neutrosophic Genetics is the study of genetics using neutrosophic logic, set, probability, statistics, measure and other neutrosophic tools and procedures. In this paper, based on the Neutrosophic Theory of Evolution (that includes degrees of Evolution, Neutrality (or Indeterminacy), and Involution) – as extension of Darwin’s Theory of Evolution, we show the applicability of neutrosophy in genetics, and we present within the frame of neutrosophic genetics the following concepts: neutrosophic mutation, neutrosophic speciation, and neutrosophic coevolution.

Trilepisium (Moraceae): Four New Species From Madagascar, Shawn Kelley

Theses

Trilepisium is a genus of tree with two member species: T. madagascariense and T. gymnandrum. This genus shows diversity in habit and morphology greatly exceeding that expected of a genus with two member species. Concerted collection efforts since the last revision have suggested there are several unrecognized species within Trilepisium and a revision is needed. Chapter one of this thesis details the history of this taxanomically challenging genus and presents the results of our study of 600 Malagasy herbarium specimens. Trilepisium is more adequately circumscribed as containing 17 species, 11 of which are new to science. Chapter two contains …

Stygobitic Crustaceans In An Anchialine Cave With An Archeological Heritage At Vodeni Rat (Island Of Sveti Klement, Hvar, Croatia), Alessandro Montanari, Nicolas Cerveau, Barbara Fiasca, Jean-François Flot, Diana Galassi, Maurizio Mainiero, David Mcgee, Tadeusz Namiotko, Stefano Recanatini, Fabio Stoch

International Journal of Speleology

A group of four amphoras found in the anchialine cave of Vodeni Rat in the Croatian island of Sveti Klement, on a rocky ledge at 24 m water depth, indicates that a freshwater source was exploited at the bottom of this karstic pit by islanders and/or passing-by sailors from the late Roman Republican Period to the Early Medieval Period. In other words, prior to the 4^th–7^th century CE, Vodeni Rat was not an anchialine cave but a Pleistocene karstic pit with a freshwater pool at the bottom. Seawater started to infiltrate this cavity via newly opened fissures …