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Full-Text Articles in Ecology and Evolutionary Biology

Cell Volume As A Determinant Of Virus-Mediated Population Growth In Ciliates, Jace Miller, John Paul Delong Phd Mar 2023

Cell Volume As A Determinant Of Virus-Mediated Population Growth In Ciliates, Jace Miller, John Paul Delong Phd

Honors Program: Senior Projects (Public)

Many protists and other small aquatic organisms consume virus particles, a behavior known as virovory. Some species of protists, such as the ciliate Halteria grandinella, can grow and divide using viruses as their sole food source. Other ciliate species have previously been shown to consume large quantities of viral particles, but it is unclear if they are able to support population growth with viruses alone. Because large ciliates have a higher energy demand, we hypothesize that they will be unable to support population growth on a virus-only diet. We fed nine ciliate species a diet of chloroviruses and found …


Prairie Dogs, Gary Witmer, Jon Grant, Kendra Cross Mar 2023

Prairie Dogs, Gary Witmer, Jon Grant, Kendra Cross

Wildlife Damage Management Technical Series

Prairie dogs (Cynomys spp.) occur throughout the prairie states of middle North America from Mexico northward into Canada. They occupy a variety of habitats from prairies to high mountain valleys and sage brush-dominated deserts. The most common species is the black-tailed prairie dog (Cynomys ludovicianus; Figure 1). Prairie dogs are considered a “keystone species.” They provide habitat for many other native, grassland species. Prairie dogs live in colonies or “towns” that can span hundreds to thousands of acres. Depending on the species, their presence is evident by their burrow system. Despite the many ecosystem benefits prairie dogs provide by modifying …


Timing And Magnitude Of Drought Impacts On Carbon Uptake Across A Grassland Biome, Andrew Felton, Gregory R. Goldsmith Feb 2023

Timing And Magnitude Of Drought Impacts On Carbon Uptake Across A Grassland Biome, Andrew Felton, Gregory R. Goldsmith

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Although drought is known to negatively impact grassland functioning, the timing and magnitude of these impacts within a growing season remains unresolved. Previous small-scale assessments indicate grasslands may only respond to drought during narrow periods within a year; however, large-scale assessments are now needed to uncover the general patterns and determinants of this timing. We combined remote sensing datasets of gross primary productivity and weather to assess the timing and magnitude of grassland responses to drought at 5 km2 temporal resolution across two expansive ecoregions of the western US Great Plains biome: the C4-dominated shortgrass steppe and …


Plastivore: Identification And Functional Characterization Of Plastic Degrading Lipase And Carboxylesterase Enzyme Families From Galleria Mellonella, Joseph Boctor Jan 2023

Plastivore: Identification And Functional Characterization Of Plastic Degrading Lipase And Carboxylesterase Enzyme Families From Galleria Mellonella, Joseph Boctor

Theses and Dissertations

[provided as attachment while patent is pending]


The Future Of Pandemics: Land Use Controls As Means Of Preventing Zoonotic Disease, Bailey Andree Jan 2023

The Future Of Pandemics: Land Use Controls As Means Of Preventing Zoonotic Disease, Bailey Andree

Pace International Law Review

Zoonotic diseases are increasing in frequency as climate change worsens around the world, with the recent COVID-19 pandemic highlighting the inadequate mechanisms in place to counteract disease spread. This article reviews various zoonotic diseases and their patterns of spread, highlighting land use change as the key driver of disease to demonstrate the need for legal intervention. International land use law is a little-developed subsect of environmental law that holds the key to combating this disease spread, and this article proposes solutions through this legal lens. Land use techniques which may be used to combat disease spread include conservation laws, setback …


Belowground Plant Communities: Seed Bank Dynamics And Relationship To Aboveground Vegetation In Grazing Allotment Of Klamath County, Oregon, Dellaina C. Morse, Scott M. Estepa Jan 2023

Belowground Plant Communities: Seed Bank Dynamics And Relationship To Aboveground Vegetation In Grazing Allotment Of Klamath County, Oregon, Dellaina C. Morse, Scott M. Estepa

Environmental Science & Management Senior Capstones

Seed banks are valuable resources for restoration but are understudied. The species present in the aboveground composition influence the seed bank through seed inputs. Land managers utilize herbicides to selectively reduce certain species in the above- and belowground composition. The aim of this paper is to observe and assess the species present in a seed bank post-herbicide application, and to discuss the seed bank potential for future restoration at the specific site in Klamath County, Oregon. Soil core samples were collected in the field and brought to the lab where they were processed and prepared for germination. We watered and …


Reconstructing The Ecological Relationships Of The Latest Cretaceous Antarctic Dinosaurs And How Functional Tooth Morphology Influenced Diet And Ecological Niche Among Basal Ornithopod Dinosaurs, Ian Broxson Jan 2023

Reconstructing The Ecological Relationships Of The Latest Cretaceous Antarctic Dinosaurs And How Functional Tooth Morphology Influenced Diet And Ecological Niche Among Basal Ornithopod Dinosaurs, Ian Broxson

EWU Masters Thesis Collection

Of the final three connected Gondwanan landmasses, the dinosaur fossil record of Antarctica in the Cretaceous is the least complete. Most dinosaur faunas in this time period (145 Ma to 66.0 Ma) are widely separated geographically and temporally from one another by million years. However, a group of non-avian dinosaurs from the James Ross Basin (JRB) of the Antarctic Peninsula, composed of two elasmarians, a parankylosaurian ankylosaur, a hadrosaur and a suspected megaraptor, all are represented by fragmentary remains have emerged from the same horizon of the Sandwich Bluff Member (SBM) of the López de Bertodano Formation and were thus, …


Evolution Of The Diets Of Australian Possums (Marsupialia: Phalangeriformes) From The Etadunna Formation In The Lake Eyre Basin, South Australia, Theodore C. Wheat Jan 2023

Evolution Of The Diets Of Australian Possums (Marsupialia: Phalangeriformes) From The Etadunna Formation In The Lake Eyre Basin, South Australia, Theodore C. Wheat

EWU Masters Thesis Collection

The Lake Eyre Basin in South Australia holds Australia’s oldest known fossil marsupials representing both extant and extinct families in the Etadunna Formation, a formation that spans nearly two million years from 23.3 to 25 MA. During that two-million-year period, the terrestrial herbivorous marsupials present in the area underwent a dramatic transition both taxonomically and dentally, likely brought on by a changing environment caused by a warming climate. However, it is unknown whether a similar change occurred to the marsupials like possums that live up in the canopy. Understanding this could help determine how extensively this change in the environment …


Activity Patterns Of The Critically Endangered Central American River Turtle (Dermatemys Mawii), Cora Dyslin Jan 2023

Activity Patterns Of The Critically Endangered Central American River Turtle (Dermatemys Mawii), Cora Dyslin

Graduate Theses/Dissertations

The Central American River Turtle (Dermatemys mawii) is native to southern Mexico, eastern Guatemala, and Belize and is primarily restricted to watersheds that drain into the Gulf of Mexico and Caribbean Sea. Hunting, both for personal consumption and market meat, has been the primary driver of declines, and the species is now classified as critically endangered. Results from past studies that have used netting and visual surveys to detect D. mawii suggest that the species is chiefly nocturnal. However, it is unclear to what extent the perception of nocturnality has been biased by the timing of survey efforts …


Investigating The Effects Of Disturbance And Competition On Establishment, Growth, And Reproduction Of The Endangered Ripariosida Hermaphrodita, Daniel Engelking Jan 2023

Investigating The Effects Of Disturbance And Competition On Establishment, Growth, And Reproduction Of The Endangered Ripariosida Hermaphrodita, Daniel Engelking

Theses and Dissertations (Comprehensive)

Ripariosida hermaphrodita (Virginia Mallow) is a perennial riparian plant with broad, maple-like leaves. It grows up to three meters high and is often found in large clonal patches, but sexually reproduces readily. While this plant may seem like a redoubtable competitor when growing in large colonies, it is declining across its range in North America. The only known occurrences in Canada are in southern Ontario. Prior to this study, no new populations had been recorded even though one of the known populations produces copious amounts of viable seed with potential to disperse. There are many hypotheses for its rarity, but …


Differences In Drifting Invertebrate Communities Across Arctic Ecozones And The Influence On Potential Growth Of Grayling (Thymallus Arcticus), Charles Chanyi Jan 2023

Differences In Drifting Invertebrate Communities Across Arctic Ecozones And The Influence On Potential Growth Of Grayling (Thymallus Arcticus), Charles Chanyi

Theses and Dissertations (Comprehensive)

Invertebrate drift is a key process that potentially affects multiple levels of food web organization within stream environments. However, our understanding of the mechanistic drivers of drift in high latitude streams and subsequent bottom-up control that drift may have on fish predators in these environments remains understudied. This project aimed to gain the baseline knowledge of how drift functions across two major high latitude ecozones, the boreal forest and tundra, and how those possible differences in drifting community characteristics may impact drift-feeding Arctic grayling (Thymallus arcticus). These objectives were accomplished by characterizing stream environments across both ecozones, sampling …


Discerning Friend From Foe: Systematic Revision Of Cuscuta L. Section Indecorae Using A Combined Ecological, Morphometric, And Phylogenetic Approach., Corey Burt Jan 2023

Discerning Friend From Foe: Systematic Revision Of Cuscuta L. Section Indecorae Using A Combined Ecological, Morphometric, And Phylogenetic Approach., Corey Burt

Theses and Dissertations (Comprehensive)

The genus Cuscuta (Dodder; Convolvulaceae) are obligate parasitic plants. In one clade known as section Indecorae, there are species which are considered pests that pose significant threats to agricultural crop production, while other species are rare or known only from historical records. Section Indecorae contains three species: C. coryli, C. warneri, and C. indecora (the latter with three infraspecific taxa: var. indecora, var. longisepala, and var. attenuata). The systematics of section Indecorae are not currently resolved. Cuscuta indecora has a long and complicated taxonomic history with many infraspecific varieties described, and …


Thermotrophy Exploratory Study, James Weifu Lee Jan 2023

Thermotrophy Exploratory Study, James Weifu Lee

Chemistry & Biochemistry Faculty Publications

The question of whether environmental heat energy could be utilized as a source of energy for biological metabolism is the center of this exploratory research. In 1979, this author postulated a hypothesis for the existence of thermotrophs that could isothermally utilize environmental heat energy as a source of their energy on Earth. According to this hypothesis, the thermotrophs could be the first primitive forms of life in the early Earth environment. The chemotrophs and phototrophs that we currently are all well familiar with might have been evolved somehow from the primitive thermotrophs. Furthermore, all the organisms currently regarded as the …


The Long-Term Effects Of Wildfire Severity On Oak-Pine Communities And Their Microclimates, Scott Glenn Culbert Jan 2023

The Long-Term Effects Of Wildfire Severity On Oak-Pine Communities And Their Microclimates, Scott Glenn Culbert

Theses and Dissertations--Forestry and Natural Resources

In the eastern U.S., fire-dependent tree species have historically dominated upland forest communities, but are now experiencing widespread regeneration challenges as a result of 20th century fire suppression policies, and are being replaced by mesophytic species. Wildfires that contain areas of high burn severity may provide an important means of mitigating these challenges and facilitating fire-dependent species regeneration and recruitment into larger size classes. One mechanism by which high-severity fire can accomplish this is by modifying understory microclimate characteristics to be more conducive to these species’ growth. A wildfire within the Daniel Boone National Forest, Kentucky, USA, provided the …


Csi Botany: Dna Barcode “Fingerprints” Identify Cryptic Urban Flora, Luis R. Vega Jan 2023

Csi Botany: Dna Barcode “Fingerprints” Identify Cryptic Urban Flora, Luis R. Vega

Theses and Dissertations

As short genomic markers, DNA barcodes can play a role in conservation by identifying cryptic species and hybrids when morphological approaches fall short. Here we present our application of barcodes to the identities of two wetland taxa as part of an ongoing floristic inventory of Van Cortlandt Park (VCP), Bronx, NY. Previous barcode data by Marriott et al. (2018) identified the VCP lake water lily as the exotic Nymphaea alba, rather than the native N. odorata as historically described. In addition, cattails in the park were historically identified as the native Typha latifolia and the exotic T. angustifolia …


Effects Of Duckweed On Mosquito Oviposition And Larval Survivorship, Alyssa Gushka Jan 2023

Effects Of Duckweed On Mosquito Oviposition And Larval Survivorship, Alyssa Gushka

Capstone Showcase

Invasive species are those non-natives to habitat and that negatively impact the environment or human health problems. Invasive mosquitoes threaten the environment and humans, as they transmit 17% of infectious diseases including malaria, West Nile virus and yellow fever. Aedes japonicas and Aedes albopictus are invasive mosquitoes that often deposit eggs in artificial containers. Chemical pesticides, such as Bacillus thuringiensis israelensis (BTI), utilizes endospores to release toxins into the larvae. However, BTI creates negative consequences for the environment and other species. Many plants are being examined to see if they can act as natural pesticides. Duckweeds are native to North …


Biogeography Of Special Metabolites Produced By Ant-Associated Bacteria, Katherine Hansen Jan 2023

Biogeography Of Special Metabolites Produced By Ant-Associated Bacteria, Katherine Hansen

Scripps Senior Theses

There is an urgent and growing need for novel antibiotics with the growing prevalence of antibiotic-resistant pathogens. Ecologically-guided discovery is a strategy that focuses on how and where specially evolved metabolites such as antibiotics are used in nature. This strategy reveals unique active molecules with potential for human use. An unexplored niche with great potential for antibiotic discovery exists with Southwestern fungus-farming Trachymyrmex ants and their Actinobacteria symbionts. In exchange for nutrients from the ant, the ants’ bacterial symbiont produces antifungal molecules that protect the ants’ fungal cultivar from invasion by pathogenic microorganisms. They also produce antibacterial molecules to protect …


Harnessing Citizen Science And Collections Data For Invasive Plant Surveillance, Adin L. Ring Jan 2023

Harnessing Citizen Science And Collections Data For Invasive Plant Surveillance, Adin L. Ring

Library Map Prize

Our main source of information about the distribution of invasive plants in the United States comes from occurrence records in three categories: biological collections (physical plant specimens in museums), citizen science (opportunistic observations by untrained civilians), and invasion monitoring (structured observation by government or non-profit agencies). This study compiles a set of 3.1 million occurrence records of 3,578 introduced plant species in the continental United States, and infers spatial, temporal, and taxonomic biases by comparing the three categories of data. We find that citizen science contributes the largest bulk of records, and does better capturing visually conspicuous plants and very …


Intestinal Parasite Infection In Tibetan Macaques (Macac Thebetana) In Eastern China, Miarisoa Ramilison Jan 2023

Intestinal Parasite Infection In Tibetan Macaques (Macac Thebetana) In Eastern China, Miarisoa Ramilison

All Master's Theses

Grooming is one of the crucial social behaviors of primate species that functions to remove parasites and maintain social bonds. Although, much data exists to support the idea that grooming is essential in forming and sustaining social bonds among individuals, there is a lack of information about the extent to which it removes ectoparasites or contributes to the spread of internal parasites. To fill this gap in the literature, we investigated the relationship between social contact behavior including grooming and intestinal parasite infection in Tibetan macaques (Macaca thibetana). This species lives at Mt. Huangshan in China. We used …


Rat Biosecurity Surveillance And Response Following Eradication On A Tropical Atoll, David Ringler, Richard Griffiths, Frank Murphy, Baudouin Des Monstiers, James C. Russell Jan 2023

Rat Biosecurity Surveillance And Response Following Eradication On A Tropical Atoll, David Ringler, Richard Griffiths, Frank Murphy, Baudouin Des Monstiers, James C. Russell

Human–Wildlife Interactions

Biosecurity is a key element following any eradication operation, employing tools that allow both the identification and elimination of survivors or the early detection of new invaders. Eradication managers must ensure the surveillance strategy is correctly adapted to the spatial context and that the potential causes of a pest’s presence are understood to optimize their operational plans. We used the case of the eradication of black (Rattus rattus) and Pacific rats (Rattus exulans) from Honuea and Onetahi islets (Tetiaroa Atoll, French Polynesia) in 2020 to test an approach that combines rapid eradication assessment modelling and genetic …


Human–Black Bear Interactions And Public Attitudinal Changes In An Urban Ordinance Zone, Mark A. Barrett, Sarah E. Barrett, David J. Telesco, Michael A. Orlando Jan 2023

Human–Black Bear Interactions And Public Attitudinal Changes In An Urban Ordinance Zone, Mark A. Barrett, Sarah E. Barrett, David J. Telesco, Michael A. Orlando

Human–Wildlife Interactions

Human–bear (Ursus spp.) interactions (HBI) commonly occur in residential areas throughout North America. Negative HBI can be alleviated by using bear-resistant garbage cans (BRC) and by securing other bear attractants (e.g., bird feeders). Since the early 2000s, human and Florida black bear (U. americanus floridanus) densities have increased substantially throughout Florida, USA, concurrently producing an increase in HBI. In central Florida, an area with high densities of humans and black bears, we surveyed 2 neighborhoods that occurred in an urban ordinance zone established in 2016 that required residents to secure anthropogenic food sources. Residents were supplied with …


Call For Associate Editors, S. Nicole Frey Jan 2023

Call For Associate Editors, S. Nicole Frey

Human–Wildlife Interactions

This is a call for associate editors for Human-Wildlife Interactions.


Cover, Editorial Staff, Journal Information Jan 2023

Cover, Editorial Staff, Journal Information

Human–Wildlife Interactions

This includes the cover, editorial staff, and journal information.


Effects Of Ph, Eelgrass, And Settlement Substrate On The Growth Of Juvenile Magallana (Crassostrea) Gigas, A Commercially Important Oyster Species, Johnny S. Roche Jan 2023

Effects Of Ph, Eelgrass, And Settlement Substrate On The Growth Of Juvenile Magallana (Crassostrea) Gigas, A Commercially Important Oyster Species, Johnny S. Roche

Cal Poly Humboldt theses and projects

Worsening ocean acidification (OA), resulting from ongoing absorption of atmospheric carbon dioxide (CO2) by the oceans, threatens marine life globally. Calcifying organisms, especially their early life stages, are particularly vulnerable; this includes the economically important Pacific oyster, Magallana (Crassostrea) gigas. Uptake of dissolved CO2 through photosynthesis by seagrasses, like eelgrass (Zostera marina), may benefit calcifying organisms by increasing pH and carbonate availability. I conducted laboratory and field experiments to quantify carbonate chemistry modification by eelgrass and potential mitigation of OA impacts on growth in juvenile Pacific oysters. In the laboratory experiment, daytime …


Carnivore And Ungulate Occurrence In A Fire-Prone Region, Sara J. Moriarty-Graves Jan 2023

Carnivore And Ungulate Occurrence In A Fire-Prone Region, Sara J. Moriarty-Graves

Cal Poly Humboldt theses and projects

Increasing fire size and severity in the western United States causes changes to ecosystems, species’ habitat use, and interspecific interactions. Wide-ranging carnivore and ungulate mammalian species and their interactions may be influenced by an increase in fire activity in northern California. Depending on the fire characteristics, ungulates may benefit from burned habitat due to an increase in forage availability, while carnivore species may be differentially impacted, but ultimately driven by bottom-up processes from a shift in prey availability. I used a three-step approach to estimate the single-species occupancy of four large mammal species: mountain lion (Puma concolor), coyote …


Effects Of Aging On The Reproductive Success Of Female Saltmarsh Sparrows (Ammospiza Caudacutus) In Maine And New Hampshire, Isabella Rose Collamati Jan 2023

Effects Of Aging On The Reproductive Success Of Female Saltmarsh Sparrows (Ammospiza Caudacutus) In Maine And New Hampshire, Isabella Rose Collamati

Honors Theses and Capstones

The saltmarsh sparrow (Ammospiza caudacutus) is a ground-nesting specialist in coastal salt marshes of the Northeast. Rising sea-levels increase the loss of offspring due to tidal flooding, reducing nest success and resulting in a sharp population decline. In other avian species, age has been shown to affect nest success through altering fertility, behavior, and the number of young produced, favoring older individuals. I investigated age effects on nest success of female saltmarsh sparrows using nest monitoring data collected at four sites of a long-term demographic monitoring project: Chapman's Landing (Stratham, NH), Eldridge Marsh (Wells, ME), Popham Beach (Phippsburg, …


Amphisbaenian Head Movement And Burrowing Forces In Damp Granular Media, Jacob Newell Jan 2023

Amphisbaenian Head Movement And Burrowing Forces In Damp Granular Media, Jacob Newell

Williams Honors College, Honors Research Projects

Damp granular media is a difficult environment to study because it is both practically complex and it lacks equations which fully describe its behavior. In this study, an oscillatory lateral head movement and its effects while penetrating damp granular media were tested using a robophysical model. This experimental research was inspired by the burrowing behavior of the clade Amphisbaenia, a group of usually limbless squamates that employ a variety of different burrowing behaviors, but it can apply to a wide range of burrowers. This research could help with both human burrowing technologies and the further investigation of animal behaviors.


Effects Of Oyster Aquaculture On Elasmobranch Abundance And Habitat Use In Humboldt Bay, Ca, Rose Harman Jan 2023

Effects Of Oyster Aquaculture On Elasmobranch Abundance And Habitat Use In Humboldt Bay, Ca, Rose Harman

Cal Poly Humboldt theses and projects

Habitat modification from aquaculture can have large effects on natural communities, with the habitat complexity provided by aquaculture structure positively influencing benthic invertebrates and small fish abundance. However, the effects of aquaculture on larger predatory fish like elasmobranchs (i.e., sharks and rays), which use nearshore habitat to forage and provide top-down control of these ecosystems, is largely unknown. Over two years, I deployed baited remote underwater video systems (BRUVS) to examine the effects of oyster aquaculture and environmental variables such as habitat (mudflat or eelgrass), salinity (ppt), turbidity (m), temperature (°C), pH (mV), dissolved oxygen (mg · L-1), …


Comparing Mexican Spotted Owl Habitat Suitability In Two Different Habitat Types Using A Multi-Scale Ensemble Learning Framework, Danial Nayeri Jan 2023

Comparing Mexican Spotted Owl Habitat Suitability In Two Different Habitat Types Using A Multi-Scale Ensemble Learning Framework, Danial Nayeri

Cal Poly Humboldt theses and projects

Habitat fragmentation and loss are major threats to species conservation worldwide. Studying species-habitat relationships is a crucial first step toward understanding species habitat requirements, which is necessary for conservation and management planning. However, some species inhabit a range of habitat types, potentially making the use of range-wide habitat models inappropriate due to non-stationarity. The Mexican spotted owl (Strix occidentalis lucida) (MSO) is a species that inhabits both forests and rocky canyonlands, two habitats with large differences in environmental conditions. It is unclear whether the species uses habitat differently in these two habitat types or if previously builthabitat models …


Table Of Contents Jan 2023

Table Of Contents

Human–Wildlife Interactions

This is the table of contents.