Ecology and Evolutionary Biology Commons^™

The Effects Of Light Level And Temperature On Freshwater Microbial Biomass, Production, Enzyme Activity, And Community Composition, Joel Bonney

Master's Theses and Doctoral Dissertations

Algae can stimulate the production of heterotrophic microbes in periphyton communities, but the synergistic effects of light and temperature on this phenomenon are not well understood and have implications on carbon cycling and energy flow. We employed recirculating mesocosms held at different temperatures and light levels and filled with Typha litter and attached microbes to assess these effects. Heterotrophic microbial production was greater in the presence of light, as were some periphytic enzyme activities. Few response variables increased in a near-linear fashion with ascending temperature, suggesting different temperature optima. The strength of heterotrophic microbial production responses to algal photosynthesis did …

Size And Density Of Upside-Down Jellyfish, Cassiopea Sp., And Their Impact On Benthic Fluxes In A Caribbean Lagoon, Chester B. Zarnoch, Noshin Hossain, Erika Fusco, Mary Alldred, Timothy J. Hoellein, Sophia Perdikaris

School of Global Integrative Studies: Faculty Publications

Anthropogenic disturbances may be increasing jellyfish populations globally. Epibenthic jellyfish are ideal organisms for studying this phenomenon due to their sessile lifestyle, broad geographic distribution, and prevalence in near-shore coastal environments. There are few studies, however, that have documented epibenthic jellyfish abundance and measured their impact on ecological processes in tropical ecosystems. In this study, the density and size of the upside-down jellyfish (Cassiopea spp.) were measured in Codrington Lagoon, Barbuda. A sediment core incubation study, with and without Cassiopea, also was performed to determine their impact on benthic oxygen and nutrient fluxes. Densities of Cassiopea were 24–168 …

Using Northern Pike And Yellow Perch To Attempt A Trophic Cascade, Bryan Sea

Journal of Earth and Life Science

In the midwestern USA, water clarity has decreased in shallow lakes as a result of large populations of Fathead Minnow Pimephales promelas and agriculture that impact the life that depend on shallow habitats, such as waterfowl, fish, and aquatic plants. Northern Pike Esox lucius and Yellow Perch Perca flavescens were stocked in a few lakes in attempt to create a tropic cascade and reduce populations of nuisance Fathead Minnows. Northern Pike were stocked as fry and Yellow Perch were stocked as adults either pre-spawn or post-spawn. Lake managers hypothesized adult Yellow Perch would spawn and the age-0 Perch would feed …

Direct And Indirect Effects Of Sex Steroids On Gonadotrope Cell Plasticity In The Teleost Fish Pituitary, Romain Fontaine, Muhammad Rahmad Royan, Kristine Von Krogh, Finn-Arne Weltzien, Dianne M. Baker

Biological Sciences Research

The pituitary gland controls many important physiological processes in vertebrates, including growth, homeostasis, and reproduction. As in mammals, the teleost pituitary exhibits a high degree of plasticity. This plasticity permits changes in hormone production and secretion necessary to meet the fluctuating demands over the life of an animal. Pituitary plasticity is achieved at both cellular and population levels. At the cellular level, hormone synthesis and release can be regulated via changes in cell composition to modulate both sensitivity and response to different signals. At the cell population level, the number of cells producing a given hormone can change due to …

Measuring Variation In Body Morphology And Life History Traits In Brook Stickleback (Culaea Inconstans), Eastern Washington, Usa, Lily Crytser

EWU Masters Thesis Collection

For freshwater ecosystems, invasive species are considered a major threat to biodiversity, and pose a challenge to those attempting to advance management strategies aimed at conserving natural populations. An invasive species’ ability to successfully invade a new ecosystem may be influenced by phenotypic plasticity, flexibility of life history traits, and the ability to migrate/disperse, among other factors. Brook stickleback (Culaea inconstans) have been a concern in eastern Washington since 1999 when they were discovered in water bodies on Turnbull National Wildlife Refuge. The purpose of this project was to describe potential variation in body morphology traits between systems that differed …

Distribution, Density, Movement, And Support For Management Of Mountain Sucker, Pantosteus Jordani, In The Black Hills Of South Dakota, Seth J. Fopma

Electronic Theses and Dissertations

Mountain Sucker, Pantosteus jordani, is a cold-water species native to the Intermountain West. Fringe populations of Mountain Sucker have experienced declines in recent decades. The population of Mountain Sucker found in the Black Hills of South Dakota represents the eastern fringe of the species’ native range. Recognized as both an indicator of biologic health and as a species of greatest conservation need in South Dakota, recent studies have suggested significant declines in both distribution and abundance. Despite the recent study of Mountain Sucker in the region, increased understanding of Mountain Sucker ecology is needed to effectively manage for the conservation …

Influence Of Mink Predation On Brown Trout Survival And Size-Structure In Rapid Creek, South Dakota, Austin Galinat

Electronic Theses and Dissertations

I compared movement, home range, habitat selection, and mortality among radio-tagged Brown Trout (Salmo trutta) at an American Mink (Neovison vison)-removal site, improved habitat site, and an undisturbed stream site in Rapid Creek, South Dakota. I observed high, post-surgery (> 26 days) survival rate (90%) of radio tagged Brown Trout. Average gross movement of Brown Trout was greater at the improved habitat site (127 m) compared to the mink removal (31 m) site, while average home range size (i.e., stream distance) among all three sites was not significantly different indicating strong site fidelity (125 to 200 m). Brown Trout movements …

Evolutionary Determinism And Convergence Associated With Water Column Transitions In Marine Fishes, Melissa Rincon-Sandoval, Emmanuelle Duarte-Ribeiro, Aaron M. Davis, Aintzane Santaquiteria, Lily C. Hughes, Carole C. Baldwin, Luisángely Soto-Torres, Arturo Acero P., H.J. Walker Jr, Kent E. Carpenter, Marcus Sheaves, Guillermo Orti, Dahiana Arcila, Ricardo Betancur-R.

Biological Sciences Faculty Publications

Repeatable, convergent outcomes are prima facie evidence for determinism in evolutionary processes. Among fishes, well-known examples include microevolutionary habitat transitions into the water column, where freshwater populations (e.g., sticklebacks, cichlids, and whitefishes) recurrently diverge toward slender-bodied pelagic forms and deep-bodied benthic forms. However, the consequences of such processes at deeper macroevolutionary scales in the marine environment are less clear. We applied a phylogenomics-based integrative, comparative approach to test hypotheses about the scope and strength of convergence in a marine fish clade with a worldwide distribution (snappers and fusiliers, family Lutjanidae) featuring multiple water-column transitions over the past 45 million years. …

Diet Of A Recently Reintroduced River Otter (Lontra Canadensis) Population In Taos County, New Mexico, Gabriela Alexandra Wolf-Gonzalez

Theses and Dissertations--Forestry and Natural Resources

North American river otters (Lontra canadensis), native to every U.S. state and Canada, experienced extensive population decreases and range reduction until the mid-20th century as a result of overexploitation and habitat loss during European colonization. The last known river otter in New Mexico was killed on the Gila River in 1953, although unverified reports continued thru 2008. After a nearly 60-year absence from New Mexico, 33 adult river otters were reintroduced to the Rio Pueblo de Taos in the northern part of the state between 2008-2010; however, they were not subsequently monitored or studied. I characterized diet of …

The Cardiovascular Response To Acute Hypoxic Conditions In Danio Rerio, Bryce Fetterman

Williams Honors College, Honors Research Projects

There are many fish that can withstand hypoxia levels. One in particular is the zebrafish (Danio rerio). The zebrafish is a small-sized, Cyprinid teleost fish, and has been used in a laboratory setting for many reasons. A few reasons being that they are widely available, easy to care for, and the cost for these fish are very low. There are various reasons why these fish are used as a model. One main reason is because their cardiovascular system is one of the first developing organs. This allows for better resolution when studying the cardiovascular system. The purpose of …

Spatial And Temporal Genetic Structure Of Winter-Run Steelhead (Oncorhynchus Mykiss) Returning To The Mad River, California, Steven R. Fong

Cal Poly Humboldt theses and projects

Distinct populations of steelhead in the wild are in decline. The propagation of steelhead in hatcheries has been used to boost population numbers for recreational fisheries and for use in conservation. However, hatchery breeding practices of steelhead can result in changes in genetic structure. I investigated the genetic structure of winter-run steelhead (Oncorhynchus mykiss) returning to the Mad River, California, where a hatchery has been used enhance production for recreational fisheries since 1971. Genetic variability in Mad River steelhead was evaluated using 96 single nucleotide polymorphisms (SNPs) among 4203 individuals, including the Mad River and nearby locations, and …

Sampling The Local Fare: Fishes At The Sam Israel House Pit (45gr76), Soap Lake, Washington, Adam Fruge

All Master's Theses

The Sam Israel site is a precontact archaeological complex with numerous fish bones at the north end of Soap Lake, Washington. Excavated in 1976, the fish remains recovered from there were never fully analyzed prior to this research. Since this inland Columbia Plateau site had thousands of fish bones, it contained untapped potential for our understanding of ancient local fish procurement. As such, I conducted a detailed analysis of 2,862 fish bone specimens from the Sam Israel House Pit locus to: study a larger sample of fish bones in greater detail than was done before; compare the distribution of fishes …

Walleye Sander Vitreus Visceral Fat Accumulation, Cole Daleiden, Seth Renner

Journal of Earth and Life Science

For ectothermic species, proper lipid retention is critical to surviving in regions with limited growing seasons. Visceral fat is the dominant form of this energy storage in fish. Build up and depletion of these lipids occur seasonally as activity levels change throughout winter and spring. Due to this annual pattern, the purpose of this study is to determine a trend in the amount of visceral fat Walleye Sander vitreus accumulate in a time of year when metabolic rates are low and transition into the spawning process has yet to occur. Angling was the method of capture conducted during the months …

Early Life History And Stock Discrimination Of Kokanee Salmon (Oncorhynchus Nerka) In An Alpine Lake Environment, Alexandra Mccarrel

All Master's Theses

This study examines an ecologically and recreationally important population of kokanee salmon (Oncorhynchus nerka) residing in Keechelus Lake and its tributary Gold Creek in the central Cascades of Washington State. This population of kokanee salmon is a vital food base for a population of ESA-listed resident bull trout. However, little is known about the early life history of this population and how it interacts with unique features in its rearing environment. With my research I described the early life history of kokanee salmon that spawn in the lake’s main tributary, Gold Creek, and proposed a framework to determine …

Assessing The Hierarchy Of Long-Term Environmental Controls On Diatom Communities Of Yellowstone National Park Using Lacustrine Sediment Records, Victoria Chraibi, Sherilyn C. Fritz

Department of Earth and Atmospheric Sciences: Faculty Publications

An ecosystem’s ability to maintain structure and function following disturbance, defined as resilience, is influenced by a hierarchy of environmental controls, including climate, surface cover, and ecological relationships that shape biological community composition and productivity. This study examined lacustrine sediment records of naturally fishless lakes in Yellowstone National Park to reconstruct the response of aquatic communities to climate and trophic cascades from fish stocking. Sediment records of diatom algae did not exhibit a distinct response to fish stocking in terms of assemblage or algal productivity. Instead, 3 of 4 lakes underwent a shift to dominance by benthic diatom species from …

Comparing Environmental Dna And Traditional Monitoring Approaches To Assess The Abundance Of Outmigrating Coho Salmon (Oncorhynchus Kisutch) In California Coastal Streams, Emerson Alan Kanawi

Cal Poly Humboldt theses and projects

Environmental DNA (eDNA) has the potential to dramatically increase the information available to managers regarding species distribution and abundance. Collection of reliable survey information on fish abundance is essential to monitor population trends and restoration efforts for endangered and threatened species. In Northern California, coho salmon are a federally listed species and a focus of ongoing monitoring programs and restoration projects. I examined the feasibility of using eDNA to supplement, or replace, traditional outmigrating juvenile coho salmon monitoring approaches currently used at two existing coho salmon life-cycle monitoring stations. Over the spring of 2018 and spring of 2019, I collected …

Estimates Of Red Drum Mortality Via Acoustic Telemetry, T. Reid Nelson, Sean P. Powers

University Faculty and Staff Publications

Subadult (age < 3) Red Drum Sciaenops ocellatus support a valuable recreational fishery, and mortality estimates for young Red Drum are needed for proper management. To obtain these estimates, age-1 and age-2 Red Drum were implanted with acoustic transmitters and external Floy tags in two coastal Alabama rivers (Fowl and Dog rivers). Fates of tagged fish were inferred from stationary receiver detections and active relocations over 1 year. These fates were used in a Bayesian multistate model to estimate instantaneous monthly and annual mortality and emigration rates for each river and overall from both rivers. Instantaneous monthly fishing mortality (F) ranged from 0.001 to 0.112 (annual F = 0.414) in Dog River, from 0.001 to 0.126 in Fowl River (annual F = 0.309), and was 0.001–0.054 (annual F = 0.337) overall. Instantaneous monthly natural mortality (M) ranged from 0.001 to 0.002 (annual M= 0.069) in Dog River, from 0.001 to 0.036 (annual M= 0.178) in Fowl River, and from 0.001 to 0.017 (annual M= 0.090) overall. The overall annual estimate of instantaneous total mortality (Z) was 0.435. The median escapement percentage was estimated at 36.3% (95% posterior credible interval = 19.5–56.0%) using M and Z from the overall model. Unfortunately, the error on this estimate was large and inconclusive as to whether the 30% escapement goal for juvenile Red Drum to the adult population from Dog and Fowl rivers is being met. Monthly residency estimates were typically greater than 0.90, and overall annual residency was estimated at 0.716. Fishing mortality estimates from the current study are higher than recent catch curve estimates that did not include young Red Drum. These results demonstrate that young Red Drum need to be accounted for when generating mortality estimates and provide needed data for the Red Drum recreational fishery.

Habitat Associations And Co-Occurrence Patterns Of Two Estuarine-Dependent Predatory Fishes, Mariah C. Livernois, Sean P. Powers, Mark A. Albins, John F. Mareska

University Faculty and Staff Publications

Estuarine-dependent fishes experience a wide range of environmental conditions, and most species exhibit distinct associations with particular habitats. However, similar species or multiple conspecifics often overlap spatiotemporally, which can result in ecological interactions that have consequences for behaviors that can shape the structure and function of ecosystems. We used a long-term gill-net data set (2001–2015) to investigate the habitat associations and cooccurrence patterns of two estuarine-dependent predatory fishes, Red Drum Sciaenops ocellatus and Spotted Seatrout Cynoscion nebulosus, in coastal Alabama, USA. Both species were associated with similar environmental conditions, primarily low dissolved oxygen and low salinity, especially when temperature was …

Population Demographics Of Silver Carp Hypophthalmichthys Molitrix In Kentucky Lake, Allison M. Lebeda

Murray State Theses and Dissertations

Invasive species continue to threaten aquatic ecosystems in the United States. Silver Carp Hypophthalmichthys molitrix have successfully infiltrated much of the Mississippi River Basin, including Kentucky Lake – a large reservoir located on the Tennessee River in Western Kentucky. Although Silver Carp have been present in Kentucky Lake for at least a decade, until recently, very little was known about the population, how often successful reproduction is occurring, or the environmental conditions that facilitate strong year-classes. Hence, it is difficult for managers to predict the potential impact of Silver Carp on native species. Silver Carp were collected from Kentucky Lake …

The Effects Of Seasonal Variations, El Niño-Southern Oscillation, And Climate Change On The Tuna-Dolphin Association, Caitlynn Birch, Michael D. Scott, Zhi-Yong Yin, Lisa T. Ballance

Theses

Tuna and dolphins swim together in the waters of the eastern tropical Pacific, and this association has long benefitted tuna fishermen and intrigued scientists. Although the tuna-dolphin association is often referred to as a “mystery,” much is known about the association. Yellowfin tuna are primarily caught with spotted dolphins and, to a lesser extent, spinner dolphins; historically the spotted dolphin has borne the brunt of the bycatch mortality. The tuna-dolphin association is thought to be a product of the distinct oceanography of the ETP: a shallow mixed layer, a thick oxygen minimum zone, and warm surface waters. As the mixed …

Habitat Associations And Reproduction Of Fishes On The Northwestern Gulf Of Mexico Shelf Edge, Elizabeth Marie Keller

LSU Doctoral Dissertations

Several of the northwestern Gulf of Mexico (GOM) shelf-edge banks provide critical hard bottom habitat for coral and fish communities, supporting a wide diversity of ecologically and economically important species. These sites may be fish aggregation and spawning sites and provide important habitat for fish growth and reproduction. Already designated as habitat areas of particular concern, many of these banks are also under consideration for inclusion in the expansion of the Flower Garden Banks National Marine Sanctuary. This project aimed to gain a more comprehensive understanding of the communities and fish species on shelf-edge banks by way of gonad histology, …

An Agent-Based Modeling Approach For Predicting The Behavior Of Bighead Carp (Hypophthalmichthys Nobilis) Under The Influence Of Acoustic Deterrence, Joey Gaudy, Craig Garzella

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

Hypoxia In Mangroves: Occurrence And Impact On Valuable Tropical Fish Habitat, Alexia Dubuc, Ronald Baker, Cyril Marchand, Nathan Waltham, Marcus Sheaves

School of Marine and Environmental Sciences Faculty and Staff Publications and Presentations

Intertidal mangrove forests are harsh environments that can naturally experience hypoxia in association with low tide. However, we know relatively little about dissolved oxygen (DO) fluctuations and DO-induced responses by fish, although DO is a fundamental water quality parameter. This study examines DO as a potential factor regulating the utilization of intertidal mangrove forests by fish and consequently their widely recognized feeding, refuge and nursery values. We deployed underwater video cameras, coupled with DO and depth loggers, in a mangrove forest to record changes in fish assemblages in response to tidal variations in DO and other associated environmental parameters. Our …

The Influence Of Location, Positioning, And Seasonality On Feeding Behavior Of The Sydney Oyster (Saccostrea Glomerata) In New South Wales, Australia, Nathaniel Hess

Independent Study Project (ISP) Collection

Oysters are hard shelled bivalves that aggregate over time to create structures in estuarine systems, known as oyster reefs. These reefs are important for the promotion of estuarine biodiversity by supporting many species of fish, invertebrates, and plants. They also act as a key contributor to water health by using active suspension feeding mechanisms and selective feeding to remove nutrients and water borne pollutants from estuarine systems. They have been touted as possible bio-remediators. They also effect rates of sedimentation in estuaries.

Oyster reefs have historically been threatened by anthropogenic influences such as overharvesting, destructive fishing practices, water pollution, CO2 …

New Insights Into Prime Southern Ocean Forage Grounds For Thriving Western Australian Humpback Whales, Sophie Bestley, Virginia Andrews-Goff, Esmee Van Wijk, Stephen R. Rintoul, Michael Double, Jason How

Fisheries Research Articles

Humpback whale populations migrate extensively between winter breeding grounds and summer feeding grounds, however known links to remote Antarctic feeding grounds remain limited in many cases. New satellite tracks detail humpback whale migration pathways from Western Australia into the Southern Ocean. These highlight a focal feeding area during austral spring and early summer at the southern Kerguelen plateau, in a western boundary current where a sharp northward turn and retroflection of ocean fronts occurs along the eastern plateau edge. The topographic steering of oceanographic features here likely supports a predictable, productive and persistent forage ground. The spatial distribution of whaling …

Marine Plastic Pollution Afs 488g, Michael Cerbo

Library Impact Statements

No abstract provided.

Effect Of Beaver On Brook Trout Habitat In North Shore, Lake Superior Streams, Kathryn Renik

Biology Graduate Theses

In Minnesota, North American Beavers Castor canadensis (hereafter Beaver) are considered to have an overall negative affect on native Brook Trout Salvelinus fontinalis. Brook Trout provide a valued and productive sport fishery to the North Shore streams of Lake Superior and since revival of the Beaver population from past trapping and timber harvest, a reexamination of the complex ecological relationship where the two taxa interact is imperative. Suitable Brook Trout habitat is characterized by cold, spring- fed water with silt-free rocky substrate and abundant cover, all of which Beaver may directly, or indirectly, affect. Data collection occurred on 79 (200 …

Stress And Body Composition Of Juvenile Alligator Snapping Turtles (Macrochelys Temminckii), Brandon Scott Tappmeyer

Graduate Theses/Dissertations

The alligator snapping turtle (Macrochelys temminckii), is a species of conservation concern that is the subject of multiple head-start and reintroduction efforts across its range. In captive propagation programs, producing offspring that are in optimal physiological condition maximizes the likelihood of success after release. The purpose of my study was to compare stress and body composition between one free-ranging reintroduced population and two captive populations. The two captive populations were both housed in southern Oklahoma, but one group was reared indoors whereas the other inhabited outdoor ponds at a national fish hatchery. I used circulating glucocorticoid (corticosterone) concentrations as an …

Demersal Fish Use Of Printed Oyster Shells As Nesting Habitat In North Inlet Estuary, Sc, Annie Boyd, Juliana Harding

Honors Theses

Temperate estuarine blenny species establish subtidal territories and nesting sites. Four blenny species co-occur in North Inlet, SC including the striped blenny, Chasmodes bosquianus, crested blenny, Hypleurochilus geminatus, feather blenny, Hypsoblennius hentzi, and freckled blenny, Hypsoblennius ionthas. All four fishes use empty oyster (Crassostrea virginica) shells as nesting sites. Current 3D printer technology was used to create standard nest substrates to describe relationships between blenny habitat use and nest site dimensions. Replicate printed shells of 2 gape widths (5, 7 mm) for each of 2 shell cavity volumes (22 mL, 15mL, Oyster A and …

Effects Of Temperature On Microbial Parameters Associated With Decaying Plant Litter In A Stream Microcosm Experiment, Hunter David Pates

Electronic Theses and Dissertations

Increases in mean surface air temperature under climate-change predictions are expected to affect microbial activity, as well as carbon dynamics in aquatic ecosystems. I explored responses of litter-associated decomposers along temperature ranges typical of temperate streams in laboratory microcosms simulating stream conditions. The objectives of this study were to determine (1) whether the effects of temperature on stream leaf-associated microorganisms can be explained by the Metabolic Theory of Ecology (MTE); (2) if the effects of temperature are the same across temperatures commonly found in temperate streams; and (3) if there are differences in the magnitude of responses to temperature among …