Ecology and Evolutionary Biology Commons^™

Frugivory And Seed Dispersal By Carnivorans, John P. Draper, Julie K. Young, Eugene W. Schupp, Noelle G. Beckman, Trisha B. Atwood

United States Department of Agriculture Wildlife Services: Staff Publications

Seed dispersal is critical to the ecological performance of sexually reproducing plant species and the communities that they form. The Mammalian order Carnivora provide valuable and effective seed dispersal services but tend to be overlooked in much of the seed dispersal literature. Here we review the literature on the role of Carnivorans in seed dispersal, with a literature search in the Scopus reference database. Overall, we found that Carnivorans are prolific seed dispersers. Carnivorans’ diverse and plastic diets allow them to consume large volumes of over a hundred families of fruit and disperse large quantities of seeds across landscapes. Gut …

Aboveground Carbon Responses To Experimental And Natural Hurricane Impacts In A Subtropical Wet Forest In Puerto Rico, Hervé Chevalier, Nicholas V.L. Brokaw, Sheila E. Ward, Jess K. Zimmerman, Aaron B. Shiels, John Bithorn, Samuel Matta Carmona

United States Department of Agriculture Wildlife Services: Staff Publications

Climate change and disturbance make it difficult to project long-term patterns of carbon sequestration in tropical forests, but large ecosystem experiments in these forests can inform predictions. The Canopy Trimming Experiment (CTE) manipulates two key components of hurricane disturbance, canopy openness and detritus deposition, in a tropical forest in Puerto Rico. We documented how the CTE and a real hurricane affected tree recruitment, biomass, and aboveground carbon storage over 15 years. In the CTE treatments, we trimmed branches, but we did not fell trees. We expected that during the 14-year period after initial canopy trimming, regrowth of branches and stems …

Behavioral States In Space And Time: Understanding Landscape Use By An Invasive Mammal, Steven M. Gray, John M. Humphreys, Robert A. Montgomery, Dwayne R. Etter, Kurt C. Vercauteren, Daniel B. Kramer, Gary J. Roloff

United States Department of Agriculture Wildlife Services: Staff Publications

Animal movement models can be used to understand species behavior and assist with implementation of management activities. We explored behavioral states of an invasive wild pig (Sus scrofa) population that recently colonized central Michigan, USA, 2014–2018. To quantify environmental factors related to wild pig movement ecology and spatio‐temporal landscape use, we predicted wild pig behavioral states relative to land cover type, landscape structure (i.e., edge and patch cohesion), and weather conditions. We used global positioning system (GPS)‐collars and monitored 8 wild pigs from 2014–2018. We fit local convex hulls and calculated movement metrics revealing 3 wild pig behavioral states (resting, …

Capture-Recapture Reveals Heterogeneity In Habitat-Specific Mongoose Densities And Spatiotemporal Variability In Trapping Success In St. Kitts, West Indies, Caroline C. Sauvé, Are R. Berentsen, Amy Gilbert, Anne Conan, Luis Cruz-Martinez, Patrick A. Leighton

United States Department of Agriculture Wildlife Services: Staff Publications

The small Indian mongoose (Urva auropunctata) is a non-native invasive species across the Caribbean and a rabies reservoir on at least four islands in the region. Although previous studies reported mongoose density estimates in their non-native range, the variability in trapping designs, study seasonality, and analytical methods among studies precludes direct comparisons. This study is the first to report mongoose densities for the island of St. Kitts, West Indies. Our objective was to quantify mongoose densities across four habitats characteristic for the island. High capture and recapture rates in this study resulted in detailed estimates of spatial heterogeneity …

Dammed Water Quality—Longitudinal Stream Responses Below Beaver Ponds In The Umpqua River Basin, Oregon, John R. Stevenson, Jason B. Dunham, Steven M. Wondzell, Jimmy Taylor

United States Department of Agriculture Wildlife Services: Staff Publications

Beaver-related restoration (BRR) has gained popularity as a means of improving stream ecosystems, but the effects are not fully understood. Studies of dissolved oxygen (DO) and water temperature, key water quality metrics for salmonids, have demonstrated improved conditions in some cases, but warming and decreased DO have been more commonly reported in meta-analyses. These results point to the contingencies that can influence outcomes from BRR. We examined water quality related to beaver ponds in a diverse coastal watershed (Umpqua River Basin, OR, USA). We monitored water temperature 0–400m above and below beaver ponds and at pond surfaces and bottoms across …

Invasive Rodent Responses To Experimental And Natural Hurricanes With Implications For Global Climate Change, Aaron B. Shiels, Gabriela E. Ramírez De Arellano, Laura Shiels

United States Department of Agriculture Wildlife Services: Staff Publications

Hurricanes cause dramatic changes to forests by opening the canopy and depositing debris onto the forest floor. How invasive rodent populations respond to hurricanes is not well understood, but shifts in rodent abundance and foraging may result from scarce fruit and seed resources that follow hurricanes. We conducted studies in a wet tropical forest in Puerto Rico to better understand how experimental (canopy trimming experiment) and natural (Hurricane Maria) hurricane effects alter populations of invasive rodents (Rattus rattus [rats] and Mus musculus [mice]) and their foraging behaviors. To monitor rodent populations, we used tracking tunnels (inked and baited cards …

Improving Efficiency Of Prairie Dog Surveys By Using A Small Copter Drone, Aaron B. Shiels, J. W. Fischer, Danika Spock, Meagan Allira

United States Department of Agriculture Wildlife Services: Staff Publications

Prairie dogs are an accessible and enjoyed wildlife species in Colorado that require occasional surveys because populations can change abruptly due to plague outbreaks or human-induced control. We evaluated the use of small copter drones at four prairie dog colonies on Open Space and Mountain Parks lands, City of Boulder, to determine if this methodology improves efficiency over ground-based survey methods. We counted prairie dogs and burrows using two types of drones (DJI Matric 210 and Autel Evo II) at altitudes 100', 150', and 400' (burrows only). We recorded video and merged still images into orthomosaics prior to having USDA …

Revitalizing Conservation And Management Of The American Crocodile (Crocodylus Acutus) In The Dominican Republic, Robert Greco

UNF Graduate Theses and Dissertations

Crocodilian populations declined globally during the 20^th century because of overhunting and habitat loss. Some crocodilian populations have recovered recently through legal protections and habitat restoration, but the status of many crocodilian populations are still unknown because of a lack of recent data. The American crocodile (Crocodylus acutus) population in the Dominican Republic (DR) is one of these data-deficient populations, with country-wide surveys not carried out since the 1980s. From May through July 2021 we surveyed areas within DR where C. acutus is still likely residing. Our surveys yielded no crocodile sightings in Monte Cristi, suggesting that …

Effects Of Environmental And Anthropogenic Factors On Loggerhead Sea Turtle (Caretta Caretta) False Crawl Rates On Jekyll Island, Ga, Brittany Byrd

UNF Graduate Theses and Dissertations

Loggerhead sea turtles (Caretta caretta) are currently listed as “vulnerable” on the IUCN Red List and are experiencing population declines across many parts of their range. These declines are caused by environmental and anthropogenic stressors which impact sea turtle ecology and behavior, including nesting behavior. One nesting behavior sea turtles exhibit is known as “false crawling,” which is when a female sea turtle ascends the beach in an attempt to nest and either abandons the attempt altogether or while in the middle of digging an egg chamber. False crawling, a largely understudied sea turtle behavior, can not only …

Dehydration And Mortality Of Feral Horses And Burros: A Systematic Review Of Reported Deaths, John Derek Scasta, Eric Thacker, Jacob D. Hennig, Karl Hoopes

Human–Wildlife Interactions

Water is a requirement for all organisms, including equids. Dehydration-caused mortality of feral horses (Equus ferus caballus) is often cited as a cause of concern and as justification for management of feral horses, yet a paucity of information exists on the matter. We conducted a systematic review from September 1, 2020 through January 15, 2021 of available news reports of feral horse and burro (E. asinus) dehydration mortalities and public interventions to save horses using a public search engine with a priori defined search term combinations and additional snowball sampling. We found 15 uniquely reported mortality …

Feral Horses, Feral Asses, And Professional Politicians: Broodings From A Beleaguered Biologist, Vernon C. Bleich

Human–Wildlife Interactions

As a member of National Wild Horse and Burro Advisory Board, I gained insight into several aspects of feral equid management that previously had been somewhat cryptic. Foremost in my experience, though, was the dedication and professionalism of the board members with whom I served. During my tenure, the professional approach to management and the frustration faced by employees within the Horse and Burro Program became increasingly apparent. Further came the realization that the effectiveness of the board and program can be improved substantially, if (1) the board is provided the opportunity to rebut or counter incorrect or misleading information …

Evaluating Population Genetic Structure And Potential Genomic Signals Of Natural Selection In A Migratory Songbird (Protonotaria Citrea), Tyler A. Hohenstein

Theses and Dissertations

In this study I attempted to further resolve the population genetic structure in the Prothonotary Warbler (Protonotaria citrea), and conducted an outlier SNP analysis and exploratory gene ontology analysis to investigate potential ongoing natural selection in the species. This analysis of population structure confirms previous work by DeSaix et al. (2019), where weak population structure was observed between eastern sites along the Atlantic Coastal Plain, and western sites in the Mississippi Alluvial Valley, possibly due to a genetic discontinuity across the Appalachian Mountains. I conducted two forms of outlier SNP analyses, a principal component analysis (PCA)-based approach to identify SNPs …

Mitigating Bighorn Sheep–Vehicle Collisions And Habitat Fragmentation With Overpasses And Adaptive Mitigation, Jeffrey W. Gagnon, Chad D. Loberger, Kari S. Ogren, Scott C. Sprague, Susan R. Boe, Raymond E. Schweinsburg

Human–Wildlife Interactions

As transportation infrastructure expands to accommodate increasing human population growth, wildlife–vehicle conflicts (WVCs) are a growing concern for motorist safety and wildlife populations. In the case of large ungulates, minimal information exists on successful mitigation of WVCs involving bighorn sheep (Ovis canadensis) and habitat fragmentation. Too address this void, we evaluated the effectiveness of 3 new wildlife overpasses, 3 culverts, 2 bridges, and ungulate exclusionary fencing as potential desert bighorn sheep (O. c. nelsoni; sheep) crossing opportunities along US Highway 93 in Arizona, USA. We evaluated sheep movements using global positioning system (GPS) radio-transmitter collars and …

A Call For Ethical And Responsible Treatment Of Invasive Species By Recreational Anglers, Kevin A. Adeli

Human–Wildlife Interactions

Invasive species pose a prominent threat to global biodiversity, with aquatic ecosystems being particularly susceptible. In an effort to limit the spread of aquatic invasive species, numerous public awareness programs have been launched, and several regions have enacted “must-kill” angling regulations, which prohibit the live release of invasive fish species when captured. Many education programs, however, demonize invasive species and lack any instruction for humane euthanasia. This unbalanced approach has translated into widespread mistreatment of invasive species among recreational anglers. This piece addresses these concerns by discussing their significance and providing recommendations for how education programs can adopt a more …

Stakeholder Acceptance Of Wild Equid Fertility Control Mirrors Global Shifts In Attitudes To Wildlife Management, Giovanna Massei, Stephanie L. Boyles Griffin

Human–Wildlife Interactions

Wild equid (horses [Equus ferus] and burros [E. asinus]) populations have increased on public lands in the United States since the passage of the Wild Free-Roaming Horses and Burros Act of 1971. As of March 1, 2022, the Bureau of Land Management (BLM) estimated that wild equid populations on designated herd management areas (HMAs) may exceed 82,000 animals. In 2020, the total population of wild equids in the United States was estimated to exceed 300,000 animals. The BLM sets an appropriate management level (AML) for wild horse and burro herds on each HMA and removes animals …

Nonnative Ungulate Impacts On Greater Sage-Grouse Late Brood-Rearing Habitat In The Great Basin, Usa, Mikiah R. Mcginn, Steven L. Petersen, Melissa S. Chelak, Randy T. Larsen, Loreen Allphin, Brock R. Mcmillan, Dennis L. Eggett, Terry A. Messmer

Human–Wildlife Interactions

Domestic livestock grazing is the dominant land use on much of the current range inhabited by greater sage-grouse (Centrocercus urophasianus; sage-grouse) in the western United States. Nonnative feral horses (Equus ferus caballus) also inhabit important sage-grouse seasonal habitats. Overabundant feral horse populations and improper grazing by domestic cattle (Bos taurus) can impact the health of sagebrush (Artemisia spp.) and desert shrub rangeland communities and native wildlife. These impacts to sage-grouse can be exacerbated when they affect late brood-rearing habitat, which provide the forbs and arthropods required to fledge broods. Managers require better information …

Fish And Invertebrate Use Of Restored Vs. Natural Oyster Reefs In A Shallow Temperate Latitude Estuary, Jonathan H. Grabowski, Christopher J. Baillie, Adam Baukus, Rachael Carlyle, F. Joel Fodrie, Rachel K. Gittman, A. Randall Hughes, David L. Kimbro, Juhyung Lee, Hunter S. Lenihan, Sean P. Powers, Kevin Sullivan

University Faculty and Staff Publications

Coastal marine habitats continue to be degraded, thereby compelling largescale restoration in many parts of the world. Whether restored habitats function similarly to natural habitats and fully recover lost ecosystem services is unclear. In estuaries, oyster reefs have been degraded by multiple anthropogenic activities including destructive fishing practices and reduced water quality, motivating restoration to maintain oyster fisheries and other ecosystem services, often at relatively high cost. We compared fish and invertebrate communities on recently restored (0–1 year post-restoration), older restored (3–4 years post-restoration), and natural oyster reefs to determine if and when restored reefs support functionally similar faunal communities. …

The Atlantic Surfclam Fishery And Offshore Wind Energy Development: 1. Model Development And Verification, Daphne M. Munroe, Eric N. Powell, John M. Klinck, Andrew M. Scheld, Sarah Borsetti, Jennifer Beckensteiner, Eileen E. Hofmann

CCPO Publications

Competing pressures imposed by climate-related warming and offshore development have created a need for quantitative approaches that anticipate fisheries responses to these challenges. This study used a spatially explicit, ecological-economic agent-based model integrating dynamics associated with Atlantic surfclam stock biology, decision-making behavior of fishing vessel captains, and fishing fleet behavior to simulate stock biomass, and fishing vessel catch, effort and landings. Simulations were implemented using contemporary Atlantic surfclam stock distributions and characteristics of the surfclam fishing fleet. Simulated distribution of fishable surfclam biomass was determined by a spatially varying mortality rate, fishing by the fleet was controlled by captain decisions …

All Living Organisms Are Sentient, Arthur S. Reber, Frantisek Baluska, William B. Miller Jr.

Animal Sentience

We argue that all living organisms, from the simplest unicellular prokaryotes to Homo sapiens, have valenced experiences—feelings as states of preference—and are capable of cognitive representations. Bacteria can learn, form stable memories, and communicate, hence solve problems. Rowan et al.'s statement that "Subjective feelings are just that — subjective — and are available only to the animal (or human) experiencing them" is true but irrelevant. When we see a fish flopping about in the bottom of a boat we immediately recognize suffering without having a glimpse of the nature of piscine distress. Some controlled anthropomorphism can go a …

Developmental Plasticity Of Stress Tolerance And Life-History Strategy To Artificial Light At Night, Alyssa M. Bonfoey

University of the Pacific Theses and Dissertations

Artificial light at night (ALAN), or ecological light pollution, is increasingly prevalent worldwide. Exposure to ALAN tends to negatively impact animals—particularly, nocturnal animals—but life-history strategies may mitigate these costs. Animals in many regions are also increasingly exposed to climate-related stressors, such as heat and drought. Yet, interactions among ALAN, life-history strategy, and stress tolerance are unknown. Therefore, I determined if developmental ALAN exposure (1) affects development, (2) affects adult phenotype, including heat and desiccation tolerance, and (3) affects and/or interacts with life-history strategy. To address my aims, I used the variable field cricket (Gryllus lineaticeps) because its geographic range is …

Legal Recognition Of Animal Sentience: The Case For Cautious Optimism, Jane Kotzmann

Animal Sentience

Rowan et al.’s target article provides a valuable indication of the work that was required to reach the point where animals are recognised as sentient in various laws. To ensure this work was not in vain, the language of sentience needs to be used as a moral currency to demand further cultural change involving greater human respect for animals.

Mortality In Interspecific Hybrids Of Nasonia Vitripennis And Nasonia Giraulti, Bonnie Cobb

College of Graduate Studies: Theses & Dissertations

Nasonia is a parasitoid wasp genus that serves as an emerging model for studying speciation due to an incompatibility between nuclear and mitochondrial genomes between sister taxa. Short generation times, easy rearing in a lab setting, producing large amounts of progeny, and whole genome sequencing make Nasonia is an excellent candidate for studying incomplete reproductive isolation. Nasonia have five chromosomes and exhibit haplo-diploid sex determination in which fertilized eggs develop into diploid females and unfertilized eggs develop into haploid males. Recessive phenotypes are hidden in diploid females but are laid bare in haploid males as there is no interaction between …

Epigenetic Buffering In Introduced House Sparrows, M. Ellesse Lauer

College of Graduate Studies: Theses & Dissertations

Epigenetic buffering, as an environmentally induced increase in variance of epigenetic states that increases phenotypic variation to buffer populations against decreased fitness, may be a factor that resolves the genetic paradox of introduced species. DNA methylation is a molecular mechanism that could facilitate epigenetic buffering by changing in response to environmental stress. Therefore, epigenetic buffering can be detected through increased variance in DNA methylation in novel or heterogeneous environments. Introduced house sparrows (Passer domesticus) have well-documented phenotypic changes with low genetic diversity, high epigenetic diversity, and high variance in DNA methylation that provide a characteristic signature of epigenetic buffering. …

Population Dynamics, Relative Abundance, And Habitat Suitability Of Adult Red Drum (Sciaenops Ocellatus) In Nearshore Waters Of The North-Central Gulf Of Mexico, Crystal Hightower, J. Marcus Drymon, Amanda E. Jefferson, Matthew B. Jargowsky, Emily A. Seubert, Simon Dedman, John Mareska, Sean P. Powers

University Faculty and Staff Publications

In the Gulf of Mexico, the red drum (Sciaenops ocellatus) is an immensely popular sportfish, yet the Gulf of Mexico stock is currently managed as data-limited in federal waters. The results of the federal stock assessment conducted in 2016 for Gulf of Mexico red drum were not recommended for providing management advice. Consequently, we sought to address data gaps highlighted in the assessment by producing up-to- date overall and sex-specific growth models, standardized indices of relative abundance, and predictions of habitat suitability and by updating estimates of natural mortality. Using a time series for the period of 2006–2018, we assigned …

Plague Risk In The Western United States Over Seven Decades Of Environmental Change, Colin J. Carlson, Sarah N. Bevins, Boris V. Schmid

United States Department of Agriculture Wildlife Services: Staff Publications

After several pandemics over the last two millennia, the wildlife reservoirs of plague (Yersinia pestis) now persist around the world, including in the western United States. Routine surveillance in this region has generated comprehensive records of human cases and animal seroprevalence, creating a unique opportunity to test how plague reservoirs are responding to environmental change. Here, we test whether animal and human data suggest that plague reservoirs and spillover risk have shifted since 1950. To do so, we develop a new method for detecting the impact of climate change on infectious disease distributions, capable of disentangling long-term trends (signal) and …

Wild Pig Removal Reduces Pathogenic Bacteria In Low-Order Streams, Sara A. Bolds, B. Graeme Lockaby, Latif Kalin, Stephen S. Ditchkoff, Mark D. Smith, Kurt Vercauteren

United States Department of Agriculture Wildlife Services: Staff Publications

Invasive wild pig populations have undergone enormous increases in the United States and particularly across the southern U.S. in recent years. High fecundity rates and abilities to adapt quickly to varied habitats have enabled pig populations to become entrenched and difficult to eliminate. The pigs cause many negative impacts on ecosystems including degradation of water quality through infusion of fecal contamination and other non-point source pollutants. Our goal was to determine the effects of pig removal on water quality in streams that were known to be significantly polluted by pig activity Bolds (J Environ Qual 50: 441–453, 2021). We compared …

A Model For Leveraging Animal Movement To Understand Spatio-Temporal Disease Dynamics, Mark Q. Wilber, Anni Yang, Raoul Boughton, Kezia R. Manlove, Ryan S. Miller, Kim M. Pepin, George Wittemyer

United States Department of Agriculture Wildlife Services: Staff Publications

The ongoing explosion of fine-resolution movement data in animal systems provides a unique opportunity to empirically quantify spatial, temporal and individual variation in transmission risk and improve our ability to forecast disease outbreaks. However, we lack a generalizable model that can leverage movement data to quantify transmission risk and how it affects pathogen invasion and persistence on heterogeneous landscapes. We developed a flexible model ‘Movement-driven modelling of spatio-temporal infection risk’ (MoveSTIR) that leverages diverse data on animal movement to derive metrics of direct and indirect contact by decomposing transmission into constituent processes of contact formation and duration and pathogen deposition …

Review Of Loon Lessons: Uncommon Encounters With The Great Northern Diver, By James D. Paruk, Kristin Bianchini

The Prairie Naturalist

Gavia immer Brunnich (Common Loon) is a bird that has captivated bird watchers, wildlife enthusiasts, campers, cottagers, and others interested in the natural world for centuries. The loon also features prominently in Native American mythology. For many, the loon symbolizes the wildness of the north, and it is often used as a sentinel of lake health. Indeed, the Common Loon has inspired a wealth of literature, both scientific and popular, describing this species’ ecology, behavior, and fitness in the face of environmental changes. To this literature, Loon Lessons: Uncommon Encounters with the Great Northern Diver adds a complete and accurate …

Significance Of Autumn And Winter Food Consumption For Reproduction By Southern Beaufort Sea Polar Bears, Ursus Maritimus, Blaine D. Griffen, John P. Whiteman, Sariah Pullan

Biological Sciences Faculty Publications

Polar bears (Ursus maritimus) in the southern Beaufort Sea experience long annual periods when preferred seal prey are scarce or are unavailable. Consumption of bowhead whale (Balaena mysticetus) carcasses from native Alaskan subsistence hunting is increasingly common for onshore polar bears, yet the energetic consequences of this consumption remain unclear. We use data on bears captured repeatedly over periods that encompassed autumn and winter, combined with calculations, to show that adult female bears likely consume an average of at least 4 seal equivalents during both autumn and winter periods and that considerable variation in energy intake …

Plant-Frugivore Interactions Across The Caribbean Islands: Modularity, Invader Complexes And The Importance Of Generalist Species, Maximilian G.R. Vollstädt, Mauro Galetti, Christopher N. Kaiser-Bunbury, Benno I. Simmons, Fernando Gonçalves, Alcides L. Morales-Pérez, Luis Navarro, Fabio L. Tarazona-Tubens, Spencer Schubert, Tomas Carlo, Jackeline Salazar, Michel Faife-Cabrera, Allan Strong, Hannah Madden, Adam Mitchell, Bo Dalsgaard

Biological Sciences Faculty Publications

Aim: Mutualistic interactions between plants and animals are fundamental for the maintenance of natural communities and the ecosystem services they provide. However, particularly in human‐dominated island ecosystems, introduced species may alter mutualistic interactions. Based on an extensive dataset of plant–frugivore interactions, we mapped and analysed a meta‐network across the Caribbean archipelago. Specifically, we searched for subcommunity structure (modularity) and identified the types of species facilitating the integration of introduced species in the Caribbean meta‐network.

Location: Caribbean archipelago (Lucayan archipelago, Greater Antilles, Lesser Antilles).

Methods: We reviewed published scientific literature, unpublished theses and other nonpeer‐reviewed sources to compile an extensive dataset …