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Articles 61 - 90 of 259
Full-Text Articles in Biology
Genetic Population Structure And Effective Number Of Breeders In Systems Across The Range Of The Gulf Sturgeon, Jacob Zona
Master's Theses
Gulf sturgeon (Acipenser oxyicnhus desotoi) are a large, anadromous fish belonging to an ancient lineage that diverged as early as 400 MYA. Overfishing for meat and caviar during the early 1900’s reduced their range and abundance and continued habitat destruction and mortality have limited their ability to recover, leading to their listing under the Endangered Species Act. This study uses genetic techniques to determine the effective number of breeders for multiple spawning groups of Gulf sturgeon in river systems across their range to set a baseline for tracking reproductive success of the species. Accompanying genetic information relevant to …
Dolphin Behavioral Responses To Uncrewed Aerial Systems As A Function Of Exposure, Height, And Type, Savannah Damiano
Dolphin Behavioral Responses To Uncrewed Aerial Systems As A Function Of Exposure, Height, And Type, Savannah Damiano
Electronic Theses and Dissertations
Uncrewed aerial systems (UAS) are becoming a standard tool in the study of cetaceans, however, a comparative assessment of animal responses to UAS has not been established to gauge the most effective systems for cetacean study. We utilized Dolphin Quest Bermuda’s eleven bottlenose dolphins as subjects for such an investigation taking place over five weeks in 2022 and five weeks in 2023. The dolphins were evaluated for investigative behavioral responses to six off-the-shelf UAS types and a custom fixed wing system. Each UAS was flown in decreasing height vertically above the main dolphin lagoon to evaluate dolphin behavioral responses in …
Past And Present Patterns Of Neutral And Adaptive Genetic Diversity In Wild Mandrills (Mandrillus Sphinx), Anna Weber
Past And Present Patterns Of Neutral And Adaptive Genetic Diversity In Wild Mandrills (Mandrillus Sphinx), Anna Weber
LSU New Orleans Theses and Dissertations
Although primates have fascinated researchers and the public alike for generations, one species that has remained enigmatic is the mandrill (Mandrillus sphinx), a large Cercopithecine monkey endemic to Central Africa. Mandrills are currently in decline due to bushmeat hunting, urbanization, and habitat loss. Neutral and adaptive genetic diversity are important tools for understanding evolutionary history and future viability, since diversity influences a species’ ability to adapt to a changing environment. However, thus far, minimal genetic information has been available for wild mandrills. Because of the dense vegetation in their tropical forest habitat, studying wild mandrills has proven to …
Using Podcasts To Bring National Estuarine Research Reserves Into The Classroom For Grades 6-12, Kaitlyn M. Dirr
Using Podcasts To Bring National Estuarine Research Reserves Into The Classroom For Grades 6-12, Kaitlyn M. Dirr
Senior Theses
In a typical classroom setting, there are significant challenges to exposing students to concepts related to earth sciences and the environment. These challenges are exacerbated when conveying lessons about geographic areas with limited access, such as oceans and coastlines (Louv, 2010). It is now more important than ever for environmental education to improve and adapt to our changing world. Educators may have the opportunity to bring these subjects to life by using media content such as podcasts to introduce students to new places and the scientists, managers and educators that work in those spaces. In the United States, there exists …
Population Genetics And Morphometrics Of Overwintering Swamp Sparrows (Melospiza Georgiana) At Panola Mountain State Park, Ashley Mcmahon
Population Genetics And Morphometrics Of Overwintering Swamp Sparrows (Melospiza Georgiana) At Panola Mountain State Park, Ashley Mcmahon
Graduate Research Showcase
Grassland birds are facing the greatest decline of any bird guild in North America due to widespread loss of grassland habitats. Conservation efforts tend to focus on birds that breed in grasslands, but grassland habitat loss will also negatively affect populations that overwinter in grasslands. Three Swamp Sparrow subspecies (Melospiza georgiana georgiana, M. g. ericrypta, M. g. nigrescens) segregate on at least some of their breeding grounds but may mix on wintering grounds, which often includes grasslands. Philopatric passerines often also segregate by sex on wintering grounds. Thus, loss of overwintering grasslands may disproportionately impact both subspecies and sex, leading …
Increasing Capture Rates Of Grassland Birds Over Thirteen Years Indicates Successful Restoration, Katie Stumpf, Charles Muise
Increasing Capture Rates Of Grassland Birds Over Thirteen Years Indicates Successful Restoration, Katie Stumpf, Charles Muise
Georgia Journal of Science
Grassland bird populations are being lost at an alarming rate due to human modifications to grassland ecosystems. Grassland restoration has been shown to mitigate population declines for many species that use these habitats at some point in their annual cycles. We examined capture rates of adult, breeding, and hatch-year birds at a restored grassland site in the piedmont of central Georgia to determine whether colonization, breeding success, hatching success, and recruitment processes were impacting populations of grassland birds. We banded birds approximately twice per month from January 2009 through December 2021 at Panola Mountain State Park. Restoration efforts started in …
Chromosome-Length Assembly Of The Baikal Seal (Pusa Sibirica) Genome Reveals A Historically Large Population Prior To Isolation In Lake Baikal, Aliya Yakupova, Andrey Tomarovsky, Azamat Totikov, Violetta R. Beklemisheva, Maria Logacheva, Polina Perelman, Aleksey Komissarov, Pavel Dobrynin, Ksenia Krasheninnikova, Gaik Tamazian, Natalya A. Serdyukova, Michael Rayko, Tatiana Bulyonkova, Nikolay Cherkasov, Vladimir Pylev, Vladimir Peterfeld, Aleksey Penin, Elena Balanovska, Alla L. Lapidus, Dna Zoo Consortium, Stephen James O'Brien, Alexander S. Graphodatsky, Klaus-Peter Koepfli, Sergey Kliver
Chromosome-Length Assembly Of The Baikal Seal (Pusa Sibirica) Genome Reveals A Historically Large Population Prior To Isolation In Lake Baikal, Aliya Yakupova, Andrey Tomarovsky, Azamat Totikov, Violetta R. Beklemisheva, Maria Logacheva, Polina Perelman, Aleksey Komissarov, Pavel Dobrynin, Ksenia Krasheninnikova, Gaik Tamazian, Natalya A. Serdyukova, Michael Rayko, Tatiana Bulyonkova, Nikolay Cherkasov, Vladimir Pylev, Vladimir Peterfeld, Aleksey Penin, Elena Balanovska, Alla L. Lapidus, Dna Zoo Consortium, Stephen James O'Brien, Alexander S. Graphodatsky, Klaus-Peter Koepfli, Sergey Kliver
Biology Faculty Articles
Pusa sibirica, the Baikal seal, is the only extant, exclusively freshwater, pinniped species. The pending issue is, how and when they reached their current habitat—the rift lake Baikal, more than three thousand kilometers away from the Arctic Ocean. To explore the demographic history and genetic diversity of this species, we generated a de novo chromosome-length assembly, and compared it with three closely related marine pinniped species. Multiple whole genome alignment of the four species compared with their karyotypes showed high conservation of chromosomal features, except for three large inversions on chromosome VI. We found the mean heterozygosity of the studied …
Relationship Between Bats And Prairie-Dog (Cynomys Ludovicianus) Colonies In Western Kansas, Mario N. Rodriguez
Relationship Between Bats And Prairie-Dog (Cynomys Ludovicianus) Colonies In Western Kansas, Mario N. Rodriguez
Master's Theses or Doctor of Nursing Practice
Although it is known that prairie dog colonies can increase biodiversity in the areas surrounding them, there is extraordinarily little known about the relationship between bats and black-tailed prairie dogs (Cynomys ludovicianus). In a recent study from the Front Range of Colorado, several bat species were found to be consistently flying around prairie dog colonies, presumably foraging due to increased insect diversity and abundance. Despite the importance of prairie dogs to the ecosystem, prairie dog colonies are usually eradicated due to the perception that they adversely impact cattle grazing. If insectivorous bats are attracted to prairie dog colonies …
Effects Of Solar Arrays On Southwestern Desert Thermal Landscapes: Consequences For Terrestrial Ectotherms, Adrian Slade
Effects Of Solar Arrays On Southwestern Desert Thermal Landscapes: Consequences For Terrestrial Ectotherms, Adrian Slade
All Master's Theses
Solar energy development in the Southwestern United States coincides with habitat for many sensitive and endemic species, including reptiles such as Mojave Fringe-toed Lizards and Mojave Desert Tortoises who are threatened by a warming and drying climate. While utility-scale solar energy reduces carbon emissions and should ultimately benefit climate-sensitive species, it locally destroys fragile desert habitat, displaces wildlife, and has been shown to incur local air and surface temperature changes. Mitigation-based translocation of wildlife species in the face of solar development yields mixed results, and the unprecedented pace of solar expansion in the desert highlights the need for alternative practices …
Pilot Study For Invasive Brown Treesnake Baiting In Residential Areas, Shane R. Siers, Juan-Carlos Mungaray, Jordan I. S. Barcinas, Jeried E. Calaor, Rachel M. Volsteadt, Martin Kastner, Scott M. Goetz, Melia G. Nafus, Thomas C. Hall
Pilot Study For Invasive Brown Treesnake Baiting In Residential Areas, Shane R. Siers, Juan-Carlos Mungaray, Jordan I. S. Barcinas, Jeried E. Calaor, Rachel M. Volsteadt, Martin Kastner, Scott M. Goetz, Melia G. Nafus, Thomas C. Hall
Human–Wildlife Interactions
The nocturnal brown treesnake (Boiga irregularis; BTS) was accidentally introduced to the island of Guam, USA, in the Western Pacific in 1945. The BTS has spread throughout all terrestrial habitats, causing wildlife loss and economic damage. Several tools and techniques have been developed to locally reduce BTS numbers and prevent their spread to other islands. The common analgesic acetaminophen has been registered as a low-risk pesticide to manage BTS in non-residential areas. Prior to a more intensive toxic baiting campaign on Andersen Air Force Base, Guam, as part of a larger study to evaluate the effects of BTS …
Genetic Population Dynamics Of The Critically Endangered Scalloped Hammerhead Shark (Sphyrna Lewini) In The Eastern Tropical Pacific, Sydney P. Harned, Andrea Bernard, Pelayo Salinas-De-Leon, Marissa Mehlrose, Jenifer Suarez, Yolani Robles, Sandra Bessudo Lion, Felipe Ladino, Andrés López Garo, Ilena Zanella, Kevin A. Feldheim, Mahmood Shivji
Genetic Population Dynamics Of The Critically Endangered Scalloped Hammerhead Shark (Sphyrna Lewini) In The Eastern Tropical Pacific, Sydney P. Harned, Andrea Bernard, Pelayo Salinas-De-Leon, Marissa Mehlrose, Jenifer Suarez, Yolani Robles, Sandra Bessudo Lion, Felipe Ladino, Andrés López Garo, Ilena Zanella, Kevin A. Feldheim, Mahmood Shivji
Biology Faculty Articles
The scalloped hammerhead shark, Sphyrna lewini, is a Critically Endangered, migratory species known for its tendency to form iconic and visually spectacular large aggregations. Herein, we investigated the population genetic dynamics of the scalloped hammerhead across much of its distribution in the Eastern Tropical Pacific (ETP), ranging from Costa Rica to Ecuador, focusing on young-of-year animals from putative coastal nursery areas and adult females from seasonal aggregations that form in the northern Galápagos Islands. Nuclear microsatellites and partial mitochondrial control region sequences showed little evidence of population structure suggesting that scalloped hammerheads in this ETP region comprise a single …
Uncovering A Natural History Mystery At The University Of Akron, Gary M. Holliday, Lara Roketenetz
Uncovering A Natural History Mystery At The University Of Akron, Gary M. Holliday, Lara Roketenetz
Proceedings from the Document Academy
Students were engaged in a combination of detective work, biology, archives, art, and education/outreach to prepare a collection of taxidermied birds donated to the University of Akron by the Rhodes family in the early 1900s for public access and exhibition. Students had the opportunity to learn from leading experts regarding the historical significance of biological collections, proper preservation protocols, digitizing and archival practices, and the urgency of science education and communication for a public audience. Many campus and community partners were involved, including experts from local museums and nature centers.
Temperature Affects Nest Box Occupancy, Nest Success, And Nestling Size In A Southeastern Population Of Eastern Bluebirds (Sialia Sialis), Christopher G. Horacek
Temperature Affects Nest Box Occupancy, Nest Success, And Nestling Size In A Southeastern Population Of Eastern Bluebirds (Sialia Sialis), Christopher G. Horacek
Biology Theses
Given the critical role that temperature plays in avian reproductive biology, rising temperatures as a result of global climate change will likely impact reproductive success of many bird populations. Secondary cavity nesting birds, many of which rely on artificial nest boxes to maintain population levels, may be particularly at risk because increased temperatures inside nest boxes can determine whether nest boxes are selected, reduce nest success, and/or negatively affect the growth and survival of offspring. We examined the effect of nest box color on nest box temperature and the influence of nest box temperature, nest box color, entrance orientation, and …
Population Demography, Spatial Ecology, And Habitat Use Of The Florida Box Turtle (Terrapene Bauri) On A Barrier Island, Michael D. Mills
Population Demography, Spatial Ecology, And Habitat Use Of The Florida Box Turtle (Terrapene Bauri) On A Barrier Island, Michael D. Mills
USF Tampa Graduate Theses and Dissertations
Turtles are one the most threatened vertebrate groups in the world due to anthropogenic threats such as habitat loss and overexploitation. In addition to occupying a range that has been vulnerable to major habitat loss, the Florida box turtle (Terrapene bauri) is particularly at risk of overexploitation due to its popularity in the pet trade. Sanibel Island is a barrier island in southwest Florida that has experienced major habitat loss and is the site of a recent poaching event. In response to these threats, studies of both the population demography and spatial ecology were conducted on Sanibel’s Florida box turtle …
Introducing Interdisciplinary Curricula Into Conservation Biology: Exploring Changes In Students’ Perceived Proenvironmental Attitudes And Behaviors, Jasmine Janes, Lindsay J. Mccunn
Introducing Interdisciplinary Curricula Into Conservation Biology: Exploring Changes In Students’ Perceived Proenvironmental Attitudes And Behaviors, Jasmine Janes, Lindsay J. Mccunn
Journal of Educational Research and Practice
Today, conserving the natural environment is paramount. Educators have been striving to develop pedagogical approaches that facilitate greater engagement in conservation behaviors. However, many of these reforms have been targeted at an institutional level, without necessarily testing whether changes in proenvironmental perceptions, attitudes, or behaviors occur for students. This step seems important when developing conservation biology courses that provide well-rounded education that may better prepare students for future challenges in biodiverse conservation contexts. Our objective was to assess the proenvironmental attitudes and conservation values of undergraduate students enrolled in an undergraduate conservation biology course before and after instruction to determine …
Population Density And Reproductive Seasonality Of Tryonia Cheatumi (Gastropoda: Cochliopidae), The Phantom Tryonia, Kathryn E. Perez, Nina Noreika, Chad Norris, Marty Kelly, Melissa Lopez, Christina Ortega, Salma Ruiz Sandoval, Samantha Gonzalez, Weston Nowlin
Population Density And Reproductive Seasonality Of Tryonia Cheatumi (Gastropoda: Cochliopidae), The Phantom Tryonia, Kathryn E. Perez, Nina Noreika, Chad Norris, Marty Kelly, Melissa Lopez, Christina Ortega, Salma Ruiz Sandoval, Samantha Gonzalez, Weston Nowlin
School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)
We studied population density, population size, and reproductive seasonality of the Phantom Tryonia, Tryonia cheatumi (Pilsbry, 1935). This endangered freshwater snail is found only in the San Solomon Spring system, a cienega, or karst-based, arid-land freshwater spring system, in western Texas, USA. We sampled populations at seven locations in the system seasonally over a 2-yr period. San Solomon Spring, the system's largest spring and modified into a swimming pool, had the largest population of T. cheatumi, with an estimated 49 million individuals and a mean density as high as 23,626 ± 39,030 (individuals/m2 ± SD). There were seasonal differences …
Global Collision-Risk Hotspots Of Marine Traffic And The World’S Largest Fish, The Whale Shark, Freya C. Womersley, Nicolas E. Humphries, Nuno Queiroz, Marisa Vedor, Ivo Da Costa, Miguel Furtado, John P. Tyminski, Katya Abrantes, Gonzalo Araujo, Steffen S. Bach, Adam Barnett, Michael L. Berumen, Sandra Bessudo Lion, Camrin D. Braun, Elizabeth Clingham, Jesse E. M. Cochran, Rafael De La Parra, Stella Diamant, Alistair D. M. Dove, Christine L. Dudgeon, Mark V. Erdmann, Eduardo Espinoza, Richard Fitzpatrick, Jaime González Cano, Jonathan R. Green, Hector M. Guzman, Royale Hardenstine, Abdi Hasan, Fábio H. V. Hazin, Alex R. Hearn, Robert E. Hueter, Mohammed Y. Jaidah, Jessica Labaja, Felipe Ladino, Bruno C. L. Macena, John J. Morris Jr., Bradley M. Norman, Cesar Peñaherrera-Palma, Simon J. Pierce, Lina Maria Quintero, Dení Ramírez-Macías, Samantha D. Reynolds, Anthony J. Richardson, David P. Robinson, Christoph A. Rohner, David R. L. Rowat, Marcus Sheaves, Mahmood Shivji, Abraham B. Sianipar, Gregory B. Skomal, German Soler, Ismail Syakurachman, Simon R. Thorrold, D. Harry Webb, Bradley M. Wetherbee, Timothy D. White, Tyler Clavelle, David A. Kroodsma, Michele Thums, Luciana C. Ferreira, Mark G. Meekan, Lucy M. Arrowsmith, Emily K. Lester, Megan M. Meyers, Lauren R. Peel, Ana M. M. Sequeira, Victor M. Eguiluz, Carlos M. Duarte, David W. Sims
Global Collision-Risk Hotspots Of Marine Traffic And The World’S Largest Fish, The Whale Shark, Freya C. Womersley, Nicolas E. Humphries, Nuno Queiroz, Marisa Vedor, Ivo Da Costa, Miguel Furtado, John P. Tyminski, Katya Abrantes, Gonzalo Araujo, Steffen S. Bach, Adam Barnett, Michael L. Berumen, Sandra Bessudo Lion, Camrin D. Braun, Elizabeth Clingham, Jesse E. M. Cochran, Rafael De La Parra, Stella Diamant, Alistair D. M. Dove, Christine L. Dudgeon, Mark V. Erdmann, Eduardo Espinoza, Richard Fitzpatrick, Jaime González Cano, Jonathan R. Green, Hector M. Guzman, Royale Hardenstine, Abdi Hasan, Fábio H. V. Hazin, Alex R. Hearn, Robert E. Hueter, Mohammed Y. Jaidah, Jessica Labaja, Felipe Ladino, Bruno C. L. Macena, John J. Morris Jr., Bradley M. Norman, Cesar Peñaherrera-Palma, Simon J. Pierce, Lina Maria Quintero, Dení Ramírez-Macías, Samantha D. Reynolds, Anthony J. Richardson, David P. Robinson, Christoph A. Rohner, David R. L. Rowat, Marcus Sheaves, Mahmood Shivji, Abraham B. Sianipar, Gregory B. Skomal, German Soler, Ismail Syakurachman, Simon R. Thorrold, D. Harry Webb, Bradley M. Wetherbee, Timothy D. White, Tyler Clavelle, David A. Kroodsma, Michele Thums, Luciana C. Ferreira, Mark G. Meekan, Lucy M. Arrowsmith, Emily K. Lester, Megan M. Meyers, Lauren R. Peel, Ana M. M. Sequeira, Victor M. Eguiluz, Carlos M. Duarte, David W. Sims
Biology Faculty Articles
Marine traffic is increasing globally yet collisions with endangered megafauna such as whales, sea turtles, and planktivorous sharks go largely undetected or unreported. Collisions leading to mortality can have population-level consequences for endangered species. Hence, identifying simultaneous space use of megafauna and shipping throughout ranges may reveal as-yet-unknown spatial targets requiring conservation. However, global studies tracking megafauna and shipping occurrences are lacking. Here we combine satellite-tracked movements of the whale shark, Rhincodon typus, and vessel activity to show that 92% of sharks’ horizontal space use and nearly 50% of vertical space use overlap with persistent large vessel (>300 …
Evaluating Headstarting As A Conservation Strategy For Anegada Rock Iguanas (Cyclura Pinguis), Kelly Allison Bradley
Evaluating Headstarting As A Conservation Strategy For Anegada Rock Iguanas (Cyclura Pinguis), Kelly Allison Bradley
Biology Theses - Archive
In an effort to combat the current extinction crisis, conservation biologists have developed a diverse set of tools, including conservation physiology. This scientific discipline applies physiological concepts and tools to generate conservation solutions for a broad range of species. The Anegada Rock Iguana (Cyclura pinguis) is a Critically Endangered species native to Anegada, British Virgin Islands. Feral cats depredate hatchlings within months of emergence, drastically reducing recruitment and population growth. By the 1990s, the population had declined by 80%. A headstart program was initiated in 1997 to combat this threat and increase the population. Wild collected hatchlings are reared in …
Behavioral Choices Of Apple Snails, Pomacea Maculata, Under Varied Chemical Landscapes, Andrea Adams
Behavioral Choices Of Apple Snails, Pomacea Maculata, Under Varied Chemical Landscapes, Andrea Adams
Theses
Habitat choice is a critical behavior for organisms to successfully survive and reproduce. These choices are dictated by available environmental information about potential predation risks or food patches that form the organism’s sensory landscape. This study specifically focused on the behavioral choices of two invasive apple snail (Pomacea maculata) populations exposed to varying predation threats. We collected snails from Florida and Alabama which were used in laboratory experiments with varied sensory landscapes. Trials consisted of controls with no cues (FL: n = 7, AL: n= 7), an attractive treatment with introduced food cues (FL: n = 4, AL: …
Saving The Sea Turtles Of Anguilla: Combining Scientific Data With Community Perspectives To Inform Policy Decisions, L. M. Soanes, J. Johnson, K. Eckert, K. Gumbs, L. G. Halsey, G. Hughes, K. Levasseur, Joe Quattro, R. Richardson, J. P. Skinner, S. Wynee, F. Mukhida
Saving The Sea Turtles Of Anguilla: Combining Scientific Data With Community Perspectives To Inform Policy Decisions, L. M. Soanes, J. Johnson, K. Eckert, K. Gumbs, L. G. Halsey, G. Hughes, K. Levasseur, Joe Quattro, R. Richardson, J. P. Skinner, S. Wynee, F. Mukhida
Faculty Publications
Historic over-exploitation and the more recent threats caused by fisheries by-catch, disease and climate change have left sea turtle populations in the Wider Caribbean at risk of extinction. In 1995, following regional declines in nesting and foraging populations, the island of Anguilla implemented a moratorium on the hunting of turtles. At the request of the Government of Anguilla for scientific data to either support or remove the moratorium, comprehensive population estimates were obtained, and foraging, nesting and migratory movements were examined. In addition, community perspectives on turtles and their protection were assessed. Between 2015 and 18 surveys of 30 nesting …
High-Frequency Accelerometer Recording Of Key Predatory Behaviors In Vipers: Validation And Case Study With Timber Rattlesnakes (Crotalus Horridus), Morgan L. Thompson, Richard H. Adams, Anna Tipton, Dominic L. Desantis
High-Frequency Accelerometer Recording Of Key Predatory Behaviors In Vipers: Validation And Case Study With Timber Rattlesnakes (Crotalus Horridus), Morgan L. Thompson, Richard H. Adams, Anna Tipton, Dominic L. Desantis
Graduate Research Showcase
High-frequency accelerometer recording of key predatory behaviors in vipers: validation and case study with Timber Rattlesnakes (Crotalus horridus)
Morgan Thompson, Richard H. Adams, Anna F. Tipton, and Dominic L. DeSantis
Tri-axial accelerometers (ACTs) are becoming increasingly common in studies of animal behavior wherein direct observation of subjects in nature is constrained or impossible. ACTs are small (< 1 g) piezo-electric (spring-like) sensors that measure three-dimensional acceleration (upward, downward, and side-to-side) derived from subject motion. When leveraged with advanced machine learning techniques, these data can enable precise automated classification of a wide range of movement-mediated behaviors. Until recently, ACTs were largely reserved for larger-bodied organisms or those most amenable to the temporary external attachment of devices. Ongoing ACT miniaturization has now expanded the breadth of organisms amenable to these methods. This project aims to expand on a recently developed framework for ACT monitoring in wild-ranging snakes, a group that has been mostly overlooked in biologging applications. We are currently conducting extensive captive validation trials for robust model training and testing to enable classification of predatory behaviors, including striking and ingestion of prey items, in Timber Rattlesnakes (Crotalus horridus). Following captive validation, we will translate this method to the field with a population of C. horridus in the lower Piedmont of middle Georgia to evaluate the efficacy of externally attached ACTs for remote and continuous monitoring of …
Why Sequence All Eukaryotes?, Mark Blaxter, John M. Archibald, Anna K. Childers, Jonathan A. Coddington, Keith A. Crandall, Federica Di Palma, Richard Durbin, Scott V. Edwards, Jennifer A.M. Graves, Kevin J. Hackett, Neil Hall, Erich D. Jarvis, Rebecca N. Johnson, Elinor K. Karlsson, W. John Kress, Shigehiro Kuraku, Mara K. N. Lawniczak, Kerstin Lindblad-Toh, Jose V. Lopez, Nancy A. Moran, Gene E. Robinson, Oliver A. Ryder, Beth Shapiro, Pamela S. Soltis, Tandy Warnow, Guojie Zhang, Harris A. Lewin
Why Sequence All Eukaryotes?, Mark Blaxter, John M. Archibald, Anna K. Childers, Jonathan A. Coddington, Keith A. Crandall, Federica Di Palma, Richard Durbin, Scott V. Edwards, Jennifer A.M. Graves, Kevin J. Hackett, Neil Hall, Erich D. Jarvis, Rebecca N. Johnson, Elinor K. Karlsson, W. John Kress, Shigehiro Kuraku, Mara K. N. Lawniczak, Kerstin Lindblad-Toh, Jose V. Lopez, Nancy A. Moran, Gene E. Robinson, Oliver A. Ryder, Beth Shapiro, Pamela S. Soltis, Tandy Warnow, Guojie Zhang, Harris A. Lewin
Biology Faculty Articles
Life on Earth has evolved from initial simplicity to the astounding complexity we experience today. Bacteria and archaea have largely excelled in metabolic diversification, but eukaryotes additionally display abundant morphological innovation. How have these innovations come about and what constraints are there on the origins of novelty and the continuing maintenance of biodiversity on Earth? The history of life and the code for the working parts of cells and systems are written in the genome. The Earth BioGenome Project has proposed that the genomes of all extant, named eukaryotes—about 2 million species—should be sequenced to high quality to produce a …
Leveraging Herbaria Specimens: A New 3d Imaging Protocol And Analyses Of Diversity Of West Virginia Rosids, Zachary Scott Shamblin
Leveraging Herbaria Specimens: A New 3d Imaging Protocol And Analyses Of Diversity Of West Virginia Rosids, Zachary Scott Shamblin
Theses, Dissertations and Capstones
Herbaria are repositories of plant natural history, whose data can provide insights into the life histories of plant taxa over space and time. Recent initiatives to digitize herbarium data have made studies over broad geographic and taxonomic extents possible, with the ability of scientists to access data from large databases of herbaria. Most of the digitization initiatives have focused on flat 2D herbaria sheets, but herbaria also include 3D collections, such as fungi, mosses, lichens, and dry fruits. In Chapter 1 we propose an easy and cost-effective workflow that uses free photogrammetry software to produce 3D images of 3D herbaria …
Effects Of Drought On Habitat Quality For Native Bees In Residential Gardens Of Claremont, Ca, Max Proctor
Effects Of Drought On Habitat Quality For Native Bees In Residential Gardens Of Claremont, Ca, Max Proctor
CMC Senior Theses
Over 1,500 of the 4000 bee species found in North America inhabit California. Native bees are declining however, largely due to climate change and agricultural intensification. Previous research shows that cities can sustain diverse bee communities, due to the diversity of ornamental flowers. Urban green space represents an opportunity for native bee conservation. Residential gardens provide lots of green space and are urban pollinator hotspots. Managing yards for increased floral resources and nesting habitat can benefit native bee communities. Turfgrass provides few floral or nesting resources and negatively correlates with bee diversity. The 2011-2017 California drought caused many homeowners to …
Conservation Of Lapping Mechanism In Marsupials, Angela Brkic
Conservation Of Lapping Mechanism In Marsupials, Angela Brkic
Williams Honors College, Honors Research Projects
The oral behavior of drinking includes interactions between the tongue, jaw, and liquid being ingested to provide hydration to the animal. Different mechanisms may be used to ingest liquid such as lapping, licking, or sucking. The objective of the study was to compare the mechanism of lapping across marsupial species through comparison of the length of gape cycle, and the amplitude of jaw pitch and tongue protraction between the two marsupial species, Didelphis virginiana and Monodelphis domestica. I hypothesized that there would be no differences in any of the variables for the lapping mechanism between species. Previous work demonstrates …
The Brown Bear Gut Microbiome: A Novel Tool For Conservation & Management, Sarah M. Trujillo
The Brown Bear Gut Microbiome: A Novel Tool For Conservation & Management, Sarah M. Trujillo
All NMU Master's Theses
Gut microbiomes (GMBs), complex communities of microorganisms inhabiting the gastrointestinal tracts of their hosts, perform countless micro-ecosystem services such as facilitating energy uptake and modulating immune responses. While scientists increasingly recognize the role GMBs play in host health, the role of GMBs in wildlife ecology and conservation has yet to be realized fully. Here, I use brown bears (Ursus arctos) as an ecological model to investigate (1) how both extrinsic and intrinsic factors influence GMB community membership and structure; and (2) the correlation between GMB membership and brown bear health metrics. To achieve these aims, I subsampled archived …
Overfishing Drives Over One-Third Of All Sharks And Rays Toward A Global Extinction Crisis, Nicholas K. Dulvy, Nathan Pacoureau, Cassandra L. Rigby, Riley A. Pollom, Rima W. Jabado, David A. Ebert, Brittany Finucci, Caroline M. Pollock, Jessica Cheok, Danielle H. Derrick, Katelyn B. Herman, C. Samantha Sherman, Wade J. Vanderwright, Julia M. Lawson, Rachel H.L. Walls, John K. Carlson, Patricia Charvet, Kinattumkara K. Bineesh, Daniel Fernando, Gina M. Ralph, Jay H. Matsushiba, Craig Hilton-Taylor, Sonja V. Fordham, Colin A. Simpfendorfer
Overfishing Drives Over One-Third Of All Sharks And Rays Toward A Global Extinction Crisis, Nicholas K. Dulvy, Nathan Pacoureau, Cassandra L. Rigby, Riley A. Pollom, Rima W. Jabado, David A. Ebert, Brittany Finucci, Caroline M. Pollock, Jessica Cheok, Danielle H. Derrick, Katelyn B. Herman, C. Samantha Sherman, Wade J. Vanderwright, Julia M. Lawson, Rachel H.L. Walls, John K. Carlson, Patricia Charvet, Kinattumkara K. Bineesh, Daniel Fernando, Gina M. Ralph, Jay H. Matsushiba, Craig Hilton-Taylor, Sonja V. Fordham, Colin A. Simpfendorfer
Biological Sciences Faculty Publications
The scale and drivers of marine biodiversity loss are being revealed by the International Union for Conservation of Nature (IUCN) Red List assessment process. We present the first global reassessment of 1,199 species in Class Chondrichthyes-sharks, rays, and chimeras. The first global assessment (in 2014) concluded that one-quarter (24%) of species were threatened. Now, 391 (32.6%) species are threatened with extinction. When this percentage of threat is applied to Data Deficient species, more than one-third (37.5%) of chondrichthyans are estimated to be threatened, with much of this change resulting from new information. Three species are Critically Endangered (Possibly Extinct), representing …
Avian Reproductive Success Is Associated With Multiple Vegetation Characteristics At An Active Grassland Restoration Site In Central Georgia, Kayla Allen, Katie Stumpf
Avian Reproductive Success Is Associated With Multiple Vegetation Characteristics At An Active Grassland Restoration Site In Central Georgia, Kayla Allen, Katie Stumpf
Georgia Journal of Science
Grassland bird populations are experiencing major declines due to habitat degradation, pesticide use, and fire suppression throughout North America. Large-scale grassland restoration efforts to improve and provide suitable habitat are ongoing, but there is little data on productivity of birds breeding in restored habitats, nor on the impact of specific vegetation characteristics on reproductive success. Since 2005, agriculture fields at Panola Mountain State Park in central Georgia have been undergoing restoration to warm-season grasslands; however, until now, data on nest success or productivity was lacking. The goals of this project were to: (1) quantify reproductive success and (2) determine which …
Can Providing Positive Interactions With Snakes Change A Person’S Perception Of Dangerous Wildlife Interactions?, Bethany Walker
Can Providing Positive Interactions With Snakes Change A Person’S Perception Of Dangerous Wildlife Interactions?, Bethany Walker
Theses
Due to a long co-evolutionary history between placental mammals and reptiles, primates demonstrate aversive responses to snakes. In humans, this can result in ophidiophobia, or the fear of snakes which can arise due to cultural backgrounds, traumatic experiences, or fear instilled by others. However, these reptiles fill essential roles in ecosystems. Conservation and outreach efforts are important to help our population understand snakes’ role in our lives and the state’s broader biodiversity. Negative experiences or preconceptions about snakes can make this message hard to share with the public. Educators can help prevent intentional harm to some of these organisms through …
Effects Of Patch Size, Fragmentation, And Invasive Species On Plant And Lepidoptera Communities In Southern Texas, James A. Stilley, Christopher A. Gabler
Effects Of Patch Size, Fragmentation, And Invasive Species On Plant And Lepidoptera Communities In Southern Texas, James A. Stilley, Christopher A. Gabler
School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)
Simple Summary
Human land use has removed habitats, separated habitats into small and disconnected fragments, and introduced foreign species, which all harm wildlife. South Texas is highly diverse and home to many endangered species, but human disturbance threatens its wildlife. In south Texas, we poorly understand how different aspects of human land use influence wildlife diversity and abundance. We studied this by surveying plants and butterflies in 24 habitat fragments in south Texas that differed in size, shape, type, and land use history. Human disturbance was extensive, and foreign and weedy species were dominant in most habitats. Habitat types had …