Open Access. Powered by Scholars. Published by Universities.®
- Discipline
-
- Physical Sciences and Mathematics (189)
- Ecology and Evolutionary Biology (187)
- Medicine and Health Sciences (140)
- Microbiology (101)
- Animal Sciences (100)
-
- Chemistry (97)
- Genetics and Genomics (97)
- Plant Sciences (95)
- Cell and Developmental Biology (88)
- Integrative Biology (86)
- Biochemistry, Biophysics, and Structural Biology (84)
- Physics (73)
- Social and Behavioral Sciences (57)
- Marine Biology (56)
- Computer Sciences (54)
- Terrestrial and Aquatic Ecology (54)
- Environmental Sciences (50)
- Biodiversity (46)
- Genetics (46)
- Education (44)
- Cell Biology (42)
- Pharmacology, Toxicology and Environmental Health (41)
- Plant Biology (39)
- Entomology (38)
- Molecular Biology (37)
- Neuroscience and Neurobiology (37)
- Bioinformatics (36)
- Engineering (33)
- Institution
-
- Washington University in St. Louis (70)
- University of Nebraska - Lincoln (66)
- University of South Carolina (61)
- Nova Southeastern University (56)
- Portland State University (51)
-
- Karbala International Journal of Modern Science (46)
- Utah State University (39)
- Marquette University (38)
- TÜBİTAK (38)
- Boise State University (36)
- University of Arkansas, Fayetteville (36)
- University of Texas Rio Grande Valley (31)
- City University of New York (CUNY) (30)
- University of South Florida (28)
- Louisiana State University (27)
- Liberty University (26)
- Montclair State University (26)
- Michigan Technological University (25)
- South Dakota State University (25)
- University at Albany, State University of New York (25)
- University of Dayton (25)
- Touro College and University System (23)
- Wright State University (22)
- Kennesaw State University (21)
- University of Dar es Salaam (21)
- John Carroll University (18)
- Brigham Young University (17)
- Old Dominion University (17)
- University of New Mexico (17)
- Smith College (16)
- Keyword
-
- Biology (65)
- Ecology (29)
- Climate change (27)
- Department of Biological Sciences (23)
- Biodiversity (20)
-
- Biological Sciences (17)
- Microbiome (17)
- Behavior (16)
- Evolution (16)
- Conservation (15)
- Gene expression (15)
- Cancer (14)
- Invasive species (14)
- Bioinformatics (13)
- Metabolism (12)
- Drosophila (11)
- COVID-19 (10)
- Genetics (10)
- Genomics (10)
- Microbiology (10)
- Physiology (10)
- Stress (10)
- Temperature (10)
- Algae (9)
- Bacteria (9)
- Climate Change (9)
- Diet (9)
- Education (9)
- Minnesota (9)
- Reproduction (9)
- Publication
-
- Arts & Sciences Graduate Student Theses and Dissertations (68)
- Biology Faculty Publications and Presentations (60)
- School of Biological Sciences: Faculty Publications (53)
- Theses and Dissertations (49)
- Karbala International Journal of Modern Science (46)
-
- Biology Faculty Publications (43)
- Faculty Publications (41)
- Turkish Journal of Biology (38)
- Honors Theses (32)
- Biological Sciences Faculty Research and Publications (30)
- Electronic Theses and Dissertations (28)
- The Science Journal of the Lander College of Arts and Sciences (23)
- Student Research Symposium (21)
- Tanzania Journal of Science (21)
- Theses (21)
- School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology) (20)
- USF Tampa Graduate Theses and Dissertations (20)
- Biology Faculty Articles (19)
- Dissertations (18)
- Honors Capstones (18)
- Liberty University Research Week (18)
- Michigan Tech Publications, Part 1 (18)
- Biology ETDs (17)
- Legacy Theses & Dissertations (2009 - 2024) (17)
- Biological Sciences Faculty Publications (16)
- Biological Sciences Undergraduate Honors Theses (16)
- Trick to the Treat of Internships and Research (16)
- Biological Sciences: Faculty Publications (15)
- Biology Student Scholarship (15)
- Master of Science in Integrative Biology Theses (15)
- Publication Type
- File Type
Articles 1411 - 1440 of 1814
Full-Text Articles in Biology
Does Aphid Feeding Trigger The Production Of H202 In Wild Barley?, Richard Justin Holewa
Does Aphid Feeding Trigger The Production Of H202 In Wild Barley?, Richard Justin Holewa
All Zyzzogeton Presentations
In an in vivo experiment to see if the oxidative burst of reactive oxygen species (ROS) is utilized as a defense mechanism in barley against the bird cherry-oat aphid (Rhopalosiphum padi), aphids were pre- starved then allowed to feed on cultivated (Hordeum vulgare) and wild barley (H. spontaneum) accessions. Hydrogen peroxide (H2O2) generated in barley leaves in response to aphid feeding was quantified with DAB (3,3'-diaminobenzidine) staining. Stained leaves were digitized and analyzed using Fiji. Proportions of stained areas were statistically tested for significance (with pooled t-tests and ANOVA at 5%). No significant differences were detected between wild and cultivated …
Myosin 8 Recombinant Plasmid Within Tetrahymena Thermophilla, Evan T. Meagher
Myosin 8 Recombinant Plasmid Within Tetrahymena Thermophilla, Evan T. Meagher
All Zyzzogeton Presentations
No abstract provided.
Xenotransplants: The Risks And Benefits, Sima Langner
Xenotransplants: The Risks And Benefits, Sima Langner
The Science Journal of the Lander College of Arts and Sciences
This literature review discusses how xenotransplants from animals, especially pigs, can serve as viable alternatives to allotransplants. There are many ways of ensuring the health of the host, including testing the donor pig for cytomegalovirus, Epstein Barr virus, simian agent 8, and other viruses linked to transmitted infections. The Galα-1,3-Gal epitope and N-glycolylneuraminic acid are both recognized by human antibodies and induce rejection. To remedy this, double knockout pigs have been developed that lack both. The human complement system serves as another potential pitfall for xenotransplants that can be neutralized by introducing human complement regulatory proteins into transgenic animals pre-transplant. …
Full Issue: Volume 16, Number 1, Fall 2022
Full Issue: Volume 16, Number 1, Fall 2022
The Science Journal of the Lander College of Arts and Sciences
Complete .pdf file of Volume 16, Number 1 of The Science Journal of the Lander College of Arts and Sciences. Published Fall 2022.
Crohn’S Disease: Risk Factors As Pathways To Treatment, Yonina Wallerstein
Crohn’S Disease: Risk Factors As Pathways To Treatment, Yonina Wallerstein
The Science Journal of the Lander College of Arts and Sciences
Objective: This paper discusses the research available regarding risk factors of Crohn’s disease. Risk factors are analyzed to determine which are the most likely to cause pathogenesis. Discussion includes a definition of the disease, including new ways to diagnose and treat it. Prevalence amongst different populations is reviewed to consider a broad variety of environmental and genetic factors. Risk factors and research of affected populations lead to the study of the microbiome and how that must be further studied to broaden understanding and treatment options.
How Is H. Pylori Implicated In The Etiology Of Cancer?, Chaya S. Lowy
How Is H. Pylori Implicated In The Etiology Of Cancer?, Chaya S. Lowy
The Science Journal of the Lander College of Arts and Sciences
Gastric cancer is a major public health concern due to the many deaths it is associated with. H. pylori is present in almost all gastric cancer patients; thus, it is fundamental to understand how H. pylori is implicated in the etiology of gastric cancer. The research in this paper is primarily based on studies acquired from Touro College Online Libraries. The bacteria have the means to survive the harsh environment of the stomach by creating a safe microenvironment and propelling themselves toward safer territory. If the bacteria attach to host cells, H. pylori injects cytotoxin-associated protein A (CagA) and vacuolating …
Software Choice And Sequencing Coverage Can Impact Plastid Genome Assembly–A Case Study In The Narrow Endemic Calligonum Bakuense, Eka Giorgashvili, Katja Reichel, Calvinna Caswara, Vuqar Kerimov, Thomas Borsch, Michael Gruenstaeudl
Software Choice And Sequencing Coverage Can Impact Plastid Genome Assembly–A Case Study In The Narrow Endemic Calligonum Bakuense, Eka Giorgashvili, Katja Reichel, Calvinna Caswara, Vuqar Kerimov, Thomas Borsch, Michael Gruenstaeudl
Biological Sciences Faculty Publications
Most plastid genome sequences are assembled from short-read whole-genome sequencing data, yet the impact that sequencing coverage and the choice of assembly software can have on the accuracy of the resulting assemblies is poorly understood. In this study, we test the impact of both factors on plastid genome assembly in the threatened and rare endemic shrub Calligonum bakuense. We aim to characterize the differences across plastid genome assemblies generated by different assembly software tools and levels of sequencing coverage and to determine if these differences are large enough to affect the phylogenetic position inferred for C. bakuense compared to congeners. …
Human Otop1 Proton Channel Can Function As A Monomer, Gabriella Abigail Ulloa
Human Otop1 Proton Channel Can Function As A Monomer, Gabriella Abigail Ulloa
Theses and Dissertations
Otopetrins (OTOP) represent a new family of eukaryotic proton channels that do not share structural similarities with other renowned ion channels. Otop1 was initially known for its involvement in vestibular function and its significance for otoconia formation before it was established as a bona fide sour taste receptor. The cryo-EM structures for several Otop channels have been determined and demonstrated Otop1 as a homodimer comprised of two subunits. Each subunit constitutes twelve transmembrane helices that can be further partitioned into two structurally similar six transmembrane domains designated as the N and C domains. Molecular dynamic simulations have also previously shown …
Retinal Detachment: What Are The Types And Potential Causes?, Mera Skoblo
Retinal Detachment: What Are The Types And Potential Causes?, Mera Skoblo
The Science Journal of the Lander College of Arts and Sciences
Retinal detachment is one of the few ocular emergencies. Depending on the extensiveness of the detachment, and whether it is macula on or macula off, will affect the patient’s visual acuity after treatment. Therefore, it is vital that after experiencing any common retinal detachment symptoms, the patient sees an ophthalmologist immediately. High-risk factors for retinal detachment include aging, ocular trauma, high myopia, and prior eye surgery. Statistically, the cause of a given retinal detachment often determines the specific type of detachment that occurs. There are three forms of retinal detachment, categorized separately based on their anatomical characteristics.
Gene Therapy For Cancer Treatment, Nechama Grossman
Gene Therapy For Cancer Treatment, Nechama Grossman
The Science Journal of the Lander College of Arts and Sciences
Cancer is a genetic disease in which cells grow uncontrollably and can spread throughout the body. Cancer cells have distinguishing traits which facilitate their unlimited growth; these traits can be used in the development of gene therapy cancer treatment, which includes: CRISPR, a gene-editing tool that can precisely modify human DNA; Kymriah, which induces T cells to kill cancer cells; Gendicine and zinc metallochaperones, which utilize p53, a protein vital for the destruction of cancer cells. Scientists continue to improve gene therapy treatments, making them available to more patients and decreasing the toxicity of treatments.
Physical Therapy In The Treatment And Prevention Of Pelvic Floor Dysfunctions In Women, Tova Feigenbaum
Physical Therapy In The Treatment And Prevention Of Pelvic Floor Dysfunctions In Women, Tova Feigenbaum
The Science Journal of the Lander College of Arts and Sciences
Pelvic floor dysfunctions are a widespread health issue that significantly disrupts the quality of life of those afflicted. This paper aims to present the research that proves how physical therapy, specifically pelvic floor muscle training, is an effective way to treat and prevent pelvic floor dysfunctions in women. Extensive research was done on the topic by exploring numerous scholarly databases and analyzing relevant articles on experimental trials, studies, and their results. After gaining an understanding of pelvic floor dysfunctions, studying the methodology of pelvic floor physical therapy, and examining numerous successful clinical trials, it has been determined that physical therapy …
Recombinant Ahpc Antigen From Mycobacterium Bovis Boosts Bcg-Primed Immunity In Mice, Özgün Firat Düzenli̇, Sezer Okay, İnci̇ Kazkayasi Bölük, Ayşe Fi̇li̇z Öner
Recombinant Ahpc Antigen From Mycobacterium Bovis Boosts Bcg-Primed Immunity In Mice, Özgün Firat Düzenli̇, Sezer Okay, İnci̇ Kazkayasi Bölük, Ayşe Fi̇li̇z Öner
Turkish Journal of Biology
Tuberculosis (TB) is still one of the most common infectious diseases around the world despite the widespread use of BCG (bacille Calmette-Guerin) strain of Mycobacterium bovis as a vaccine. This vaccine does not always protect people from TB, and, thus, new effective vaccines or vaccination strategies are being investigated. In this study, alkyl hydroperoxide reductase (AhpC) from M. bovis was evaluated as a new candidate vaccine antigen against TB in BALB/c mice model. The ahpC gene was amplified from M.bovis genome, cloned, and expressed in Escherichia coli. Vaccine antigen AhpC was formulated with Montanide ISA 61 VG, an oil-based emulsion …
Characterization Of The Northern Star Coral, (Astrangia Poculata) Behavioral And Physiological Response To Microplastics, Alice Ball
Biology Honors Papers
Preliminary studies have shown that corals ingest microplastics mistaken as food or co-ingested as food, and that ingestion can have effects on physiology. Coral plastic feeding preferences and egestion times are still not well understood. In a series of experiments, I investigated how exposure to microplastics impacts Astrangia poculata, the Northern Star coral, behavior in response to microplastics (feeding and egestion), and whether microplastic exposure and ingestion has any physiology effects. In the first behavioral experiment, I exposed corals to either brine shrimp eggs, or 500 μm polyethylene spheres, and did not find a significant difference in feeding rates. In …
Uv Exposure Causes Energy Trade-Offs Leading To Increased Chytrid Fungus Susceptibility In Green Tree Frog Larvae, Rebecca L. Cramp, Michel E. B. Ohmer, Craig E. Franklin
Uv Exposure Causes Energy Trade-Offs Leading To Increased Chytrid Fungus Susceptibility In Green Tree Frog Larvae, Rebecca L. Cramp, Michel E. B. Ohmer, Craig E. Franklin
Faculty and Student Publications
Levels of ultraviolet (UV) radiation have increased in many parts of the world due to the anthropogenic destruction of the ozone layer. UV radiation is a potent immunosuppressant and can increase the susceptibility of animal hosts to pathogens. UV radiation can directly alter immune function via immunosuppression and photoimmunotolerance; however, UV may also influence pathogen defences by affecting the distribution of energy resources among competing physiological processes. Both defence against UV damage and repair of incurred damage, as well as the maintenance of immune defences and responding to an immune challenge, are energetically expensive. These competing demands for finite energy …
Design And In Vitro, In Vivo Evaluation Of Antioxidant Bioadhesive Gelsfor Burn Treatment, Göksel Gökçe, Si̇nem Yaprak Karavana, Hüsnü Alper Bağriyanik, Çeti̇n Pekçeti̇n, Evren Alğin Yapar, Gülşen Aybar Tural, Evren Homan Gökçe
Design And In Vitro, In Vivo Evaluation Of Antioxidant Bioadhesive Gelsfor Burn Treatment, Göksel Gökçe, Si̇nem Yaprak Karavana, Hüsnü Alper Bağriyanik, Çeti̇n Pekçeti̇n, Evren Alğin Yapar, Gülşen Aybar Tural, Evren Homan Gökçe
Turkish Journal of Biology
Burn wounds are frequently encountered health problems, which need a new treatment approach especially in terms of good patient compliance. Availability of use of antioxidant agents and bio-adhesive gels in tissue healing can be an alternative as a new approach for wound healing. Antioxidant taurine containing bio-adhesive gels were prepared by using carbopol (CP) 940 and 934. Rheological and texture analyses were carried out on bio-adhesive gels for in vitro characterization. Wound model on Wistar rats was used to evaluate the in vivo evaluation of gels. Rheological and texture analyses showed that a carbopol bioadhesive gel has acceptable topically use …
Microplastic Abundances In The Guana River Estuary In Northeast Florida, Mckenna Keplinger
Microplastic Abundances In The Guana River Estuary In Northeast Florida, Mckenna Keplinger
Honors Undergraduate Theses
Plastic never fully disappears, but instead breaks into smaller pieces referred to as microplastics (< 5 mm length). Microplastics are common worldwide, and more studies are needed to understand the accumulation and diversity of microplastics found in various environments. In this study, six locations were sampled for one year in the Guana River Estuary, a partially impounded system with heavily urbanized headwaters. This study was conducted in conjunction with the Guana Tolomato Matanzas National Estuarine Research Reserve (GTM NERR) and the Florida Fish and Wildlife Conservation Commission (FWC) at their water sampling stations. The objectives of this study were to investigate: 1) distribution patterns across sample sites over time, 2) the color, size, and shape of microplastics found, and 3) polymer composition. Water samples were collected from surface waters in 1-L bottles, with five replicates at each site. Sampling occurred once a month, at the beginning of each month from August 2020-August 2021. Samples were analyzed for abundance and characteristics of microplastics using a dissecting microscope and the polymer composition was determined using Fourier-transform infrared spectroscopy. No pattern was found in the distribution of microplastics from north to south or over time. Variations in plastic color, size, and polymer composition suggests that there are multiple sources of pollution into the Guana River Estuary.
Predicting Gene Function Of Unknown Yeast Orfs Through Phylogenetic Comparative Analysis, Lewis Barr
Predicting Gene Function Of Unknown Yeast Orfs Through Phylogenetic Comparative Analysis, Lewis Barr
Graduate Research Showcase
Yeast (Saccharomyces cerevisiae) has been an instrumental model system for an extraordinary diverse array of research applications for over a century now. The S. cerevisiae genome was fully sequenced in 1996, and, as a result, 6,753 potential proteins were identified. These putative proteins were established by investigating likely open reading frames within the genome. Over the past few decades, nearly 5,000 open reading frames (ORFs) and their expressed proteins have been described, and the remaining undefined open reading frames are labeled as open reading frames of unknown function (ORFans). To better understand the remaining gaps within the S. …
Accelerometry Reveals Hidden Variation In The Movement Response Of Timber Rattlesnakes (Crotalus Horridus) To Roadways, Anna F. Tipton, Morgan L. Thompson, Dominic L. Desantis
Accelerometry Reveals Hidden Variation In The Movement Response Of Timber Rattlesnakes (Crotalus Horridus) To Roadways, Anna F. Tipton, Morgan L. Thompson, Dominic L. Desantis
Graduate Research Showcase
Roadways are among the most widespread and disruptive anthropogenic land use features that influence the behavior and movement of wildlife. Negative impacts including vehicle-induced mortality, habitat destruction and fragmentation, and creating barriers to movement have been well documented across taxa, but the fine scale behavioral impact of roadways on smaller, cryptic species has yet to be directly examined. Using a novel integration of emerging spatial analyses and tri-axial accelerometry, we quantified spatial and temporal aspects of movement and space use in order to investigate the coarse and fine scale influence of roadways on the movement patterns of Timber Rattlesnakes (Crotalus …
A Sweet Way To Increase The Metabolic Activity And Migratory Response Of Wound-Related Cells: Deoxy-Sugar Incorporated Natural Polymeric Fibres As A Potential Bioactive Wound Patch, Serkan Di̇ki̇ci̇
Turkish Journal of Biology
The selection of a wound dressing is crucial for successful wound management. Conventional dressings are preferable for the treatment of simple wounds. However, a bioactive wound dressing that supports wound management and accelerates the healing process is required when it comes to treating non-self-healing wounds. 2-deoxy-D-ribose (2dDR) is a small deoxy sugar that naturally occurs in human body. Although we have previously demonstrated that 2dDR can be used to induce neovascularisation and accelerates wound healing in vitro and in vivo, the literature on small sugars is conflicting, and the knowledge on how 2dDR achieves its biological activity is very limited. …
Ahead Of His Time: Joseph Grinnell, Natural History, And Inclusion And Equity In Stem, David O. Ribble
Ahead Of His Time: Joseph Grinnell, Natural History, And Inclusion And Equity In Stem, David O. Ribble
Biology Faculty Research
Joseph Grinnell designed the Natural History of the Vertebrates (NHV) course at the Museum of Vertebrate Zoology, University of California at Berkeley, over 100 years ago and the course has changed little over these years. In this essay, I connect modern pedagogical and cognitive understandings of what we know leads to success among students to the course. This analysis reveals that the course continues to be successful because it has all the elements of a student-centered, active-learning class that leads to better cognitive gains, better retention, and importantly, proportionately better gains for students from underserved populations. This study will be …
Fish Sound Production: The Swim Bladder, Michael L. Fine, Eric Parmentier
Fish Sound Production: The Swim Bladder, Michael L. Fine, Eric Parmentier
Biology Publications
Analogous to the syrinx in birds and larynx in mammals, the swim bladder is a major sound-producing organ in fishes. It also functions in hearing and is responsible for most returns from sonar. Historically, the swim bladder has been modeled as an underwater resonant bubble, whereas we provide evidence for a forced-response model in which viscous damping of the bladder wall inhibits resonance of the internal bubble. Further experimental work on the shape, wall structure, and mechanical behavior of the swim bladder is required.
An Investigation Of Bubble Resonance And Its Implications For Sound Production By Deepwater Fishes, Mark W. Sprague, Michael L. Fine, Timothy M. Cameron
An Investigation Of Bubble Resonance And Its Implications For Sound Production By Deepwater Fishes, Mark W. Sprague, Michael L. Fine, Timothy M. Cameron
Biology Publications
Although the continental slope and abyss comprise the largest habitat on earth, the absence of documented fish sounds from deep waters is striking. Fishes with sexually dimorphic muscles attached to their swim bladders suggests that sounds are likely used in male courtship on the upper, mid and lower continental slope. To investigate the effects of environmental extremes on fish sound production, the acoustic behavior of a driven bubble is examined. This study is also relevant to target strength of sonar returns from fish and hearing in auditory specialist fishes. A bubble is a classic, if imperfect, model for swim bladder …
The Role Of Ehd2 In Endothelial Cells, Rachael Judson
The Role Of Ehd2 In Endothelial Cells, Rachael Judson
Electronic Theses and Dissertations
The role of EHD2 in terms of Cav1 interaction had not been previously characterized and was the main goal of this research. Cav1 has been shown to lead to the ubiquitination of Rac1. Because of this, the role of EHD2 in Rac1 regulation was investigated. An increase in long-term migration in endothelial cells was observed and suggested that EHD2 impacts the RhoA pathway instead of the Rac1 pathway. This lead to the hypothesis that EHD2 controls a part of the RhoA pathway. This hypothesis is supported by the loss of filamentous actin and an increase in serrated junctions in cells …
Environmental Gradients Impact Key Leaf Traits In Riparian Trees, Amanda Malone
Environmental Gradients Impact Key Leaf Traits In Riparian Trees, Amanda Malone
Electronic Theses and Dissertations
Specific leaf area (SLA) reflects a plant’s carbon investment per area and relates to generalized leaf economics spectrum growth strategies (LES). To fill gaps of knowledge about intraspecific SLA variation and why it is often inconsistent with the LES, we studied the response of two riparian tree species along the urban-rural gradient in Northeastern Colorado: an invasive, nitrogen-fixer with broad tolerances and a nitrogen-limited and shade-intolerant native. Despite these differences, the two species responded similarly, apart from the response to the urban-rural gradient, in which lower nitrogen in rural areas was associated with a more conservative strategy in the native …
Interrelationships Of Systemic Changes In Hepatic Encephalopathy, Els Reuvekamp
Interrelationships Of Systemic Changes In Hepatic Encephalopathy, Els Reuvekamp
Biology and Microbiology Graduate Students Plan B Research Projects
Hepatic encephalopathy is a temporary decline in mental function that is often associated with liver disease and/or portal-systemic disease. Hepatic encephalopathy (HE) symptoms can range from minor cognitive declines to coma and are known to result from excess ammonia accumulations in the blood stream subsequent to liver failure. While HE is known to result from hepatobiliary disorder, many of the physiological process underlying its development and progression remain to be elucidated. Recent studies have identified neurological, metabolic, and microbiome changes implicated in the disease state of HE. In this review, the roles of traditional pharmaceutical interventions and newly developing understandings …
Non-Invasive Biomarkers For The Diagnosis Of Endometriosis And Polycystic Ovary Syndrome, Chandana Kamaraj
Non-Invasive Biomarkers For The Diagnosis Of Endometriosis And Polycystic Ovary Syndrome, Chandana Kamaraj
Biology and Microbiology Graduate Students Plan B Research Projects
Benign gynecological disorders can affect a high percentage of women of reproductive age, ages 15-44 years. These conditions can affect the lifestyle of the individual and can be associated with infertility. The gold standard to identify and diagnose endometriosis requires invasive surgical procedures, while the Rotterdam Criteria is used to identify and diagnose polycystic ovary syndrome. The purpose of this paper is to discuss, describe, and characterize potential non-invasive biomarkers that are present in various pathological stages of both endometriosis and polycystic ovary syndrome. These biomarkers include CA125, Serum galectin-9, hsa-miRNA-154-5p, miRNA-93, miRNA-320 and ET-1, miRNA-222, miRNA-146a, and miR-30c used …
Cbp60-Db: An Alphafold-Predicted Plant Kingdom-Wide Database Of The Calmodulin-Binding Protein 60 (Cbp60) Protein Family With A Novel Structural Clustering Algorithm, Keaun Amani, Vanessa Shivnauth, Christian Castroverde
Cbp60-Db: An Alphafold-Predicted Plant Kingdom-Wide Database Of The Calmodulin-Binding Protein 60 (Cbp60) Protein Family With A Novel Structural Clustering Algorithm, Keaun Amani, Vanessa Shivnauth, Christian Castroverde
Biology Faculty Publications
Molecular genetic analyses in the model species Arabidopsis thaliana have demonstrated the major roles of different CAM-BINDING PROTEIN 60 (CBP60) proteins in growth, stress signaling, and immune responses. Prominently, CBP60g and SARD1 are paralogous CBP60 transcription factors that regulate numerous components of the immune system, such as cell surface and intracellular immune receptors, MAP kinases, WRKY transcription factors, and biosynthetic enzymes for immunity-activating metabolites salicylic acid (SA) and N-hydroxypipecolic acid (NHP). However, their function, regulation and diversification in most species remain unclear. Here we have created CBP60-DB, a structural and bioinformatic database that comprehensively characterized 1052 CBP60 gene homologs …
Point-Of-Care Diagnosis Of Cervical Cancer: Potential Protein Biomarkersin Cervicovaginal Fluid, Büşra Köse, Özgüç Takmaz, Mete Güngör, Ahmet Tarik Baykal
Point-Of-Care Diagnosis Of Cervical Cancer: Potential Protein Biomarkersin Cervicovaginal Fluid, Büşra Köse, Özgüç Takmaz, Mete Güngör, Ahmet Tarik Baykal
Turkish Journal of Biology
Cervical cancer (CxCa) is preventable and treatable via vaccination and screening. Cervicovaginal fluid (CVF) represents the physiological components of the female genital tract. These components are suitable to be utilized for clinical purposes, therefore, making CVF a suitable material for disease screening approaches. Due to high false-negative result rates and low attendance of current expensive routine CxCa screening methods, it has become more important to develop a point-of-care (POC) screening method that every single woman could reach worldwide. For this purpose, various self-usage apparatus have been developed for screening of the human papilloma virus (HPV) infection. Furthermore, due to the …
The Isolation And Characterization Of Bacteriophage Hasitha, Gillian Brown
The Isolation And Characterization Of Bacteriophage Hasitha, Gillian Brown
Mahurin Honors College Capstone Experience/Thesis Projects
Microbacteriophage Hasitha is a virus that infects Microbacterium foliorum, a bacterium associated with grasses that was first discovered in Germany. Hasitha was isolated from an enriched compost sample and is of particular interest due to its unusual growth pattern. Most bacteriophages require actively growing host cells to produce new phage progeny. However, Hasitha can infect and kill stationary (non-replicating) bacterial cells. We discovered this unusual characteristic through a fortuitous observation of infected lawns that were allowed to incubate in the lab workspace for approximately one month. During this time, a noticeable “halo” grew around the initial site of infection …
Towards Mapping Biodiversity From Above: Can Fusing Lidar And Hyperspectral Remote Sensing Predict Taxonomic, Functional, And Phylogenetic Tree Diversity In Temperate Forests?, Aaron G. Kamoske, Kyla M. Dahlin, Quentin D. Read, Sydne Record, Scott C. Stark, Shawn P. Serbin, Phoebe L. Zarnetske
Towards Mapping Biodiversity From Above: Can Fusing Lidar And Hyperspectral Remote Sensing Predict Taxonomic, Functional, And Phylogenetic Tree Diversity In Temperate Forests?, Aaron G. Kamoske, Kyla M. Dahlin, Quentin D. Read, Sydne Record, Scott C. Stark, Shawn P. Serbin, Phoebe L. Zarnetske
Biology Faculty Research and Scholarship
Aim: Rapid global change is impacting the diversity of tree species and essential ecosystem functions and services of forests. It is therefore critical to understand and predict how the diversity of tree species is spatially distributed within and among forest biomes. Satellite remote sensing platforms have been used for decades to map forest structure and function but are limited in their capacity to monitor change by their relatively coarse spatial resolution and the complexity of scales at which different dimensions of biodiversity are observed in the field. Recently, airborne remote sensing platforms making use of passive high spectral resolution (i.e., …