Biology Commons^™

Adropin Acts In Brain To Inhibit Water Drinking: Potential Interaction With The Orphan G Protein-Coupled Receptor, Gpr19, Lauren M. Stein, Gina L.C. Yosten, Willis K. Samson

Biological Sciences Faculty Research & Creative Works

Adropin, a recently described peptide hormone produced in the brain and liver, has been reported to have physiologically relevant actions on glucose homeostasis and lipogenesis, and to exert significant effect on endothelial function. We describe a central nervous system action of adropin to inhibit water drinking and identify a potential adropin receptor, the orphan G protein-coupled receptor, GPR19. Reduction in GPR19 mRNA levels in medial basal hypothalamus of male rats resulted in the loss of the inhibitory effect of adropin on water deprivation-induced thirst. The identification of a novel brain action of adropin and a candidate receptor for the peptide …

Aging-Related Impairment Of Urine-Concentrating Mechanisms Correlates With Dysregulation Of Adrenocortical Angiotensin Type 1 Receptors In Male Fischer Rats, Hong Ji, Wei Zheng, Xie Wu, Robert C. Speth, Joseph G. Verbalis, Lauren M. Stein, Gina L.C. Yosten, Willis K. Samson, Kathryn Sandberg

Biological Sciences Faculty Research & Creative Works

To investigate age-associated impairments in fluid homeostasis, 4-mo (young) and 32-mo (old) Fischer 344/BN male rats were studied before and after a dietary sodium load. Transferring young rats from a low-sodium (LS) to a high-sodium (HS) diet increased water intake and urine volume by 1.9-and 3.0-fold, respectively, while urine osmolality and plasma aldosterone decreased by 33 and 98%. Concomitantly, adrenocortical angiotensin type 1 receptor (AT1R) density decreased by 35%, and AT1bR mRNA decreased by 39%; no changes were observed in AT1aR mRNA. In contrast, the increase in water intake (1.4-fold) was lower in the old rats, and there was no …

From Clinging To Digging: The Postembryonic Skeletal Ontogeny Of The Indian Purple Frog, Nasikabatrachus Sahyadrensis (Anura: Nasikabatrachidae), Gayani Senevirathne, Ashish Thomas, Ryan R. Kerney, James Hanken, S. D. Biju, Madhava Meegaskumbura

Biology Faculty Publications

The Indian Purple frog, Nasikabatrachus sahyadrensis, occupies a basal phylogenetic position among neobatrachian anurans and has a very unusual life history. Tadpoles have a large ventral oral sucker, which they use to cling to rocks in torrents, whereas metamorphs possess adaptations for life underground. The developmental changes that underlie these shifts in habits and habitats, and especially the internal remodeling of the cranial and postcranial skeleton, are unknown. Using a nearly complete metamorphic series from free-living larva to metamorph, we describe the postembryonic skeletal ontogeny of this ancient and unique monotypic lineage. The torrent-dwelling larva possesses a dorsoventrally flattened …

Unearthing The Fossorial Tadpoles Of The Indian Dancing Frog Family Micrixalidae, Gayani Senevirathne, Sonali Garg, Ryan R. Kerney, Madhava Meegaskumbura, S. D. Biju

Biology Faculty Publications

Tadpoles of the monotypic Indian dancing frog family Micrixalidae have remained obscure for over 125 years. Here we report the discovery of the elusive tadpoles of Micrixalus herrei from the sand beds of a forested stream in southern Western Ghats, and confirm their identity through DNA barcoding. These actively burrowing tadpoles lead an entirely fossorial life from eggs to late metamorphic stages. We describe their internal and external morphological characters while highlighting the following features: eel-like appearance, extensively muscularized body and tail, reduced tail fins, skin-covered eyes, delayed development of eye pigmentation in early pre-metamorphic stages (Gosner stages 25–29), prominent …

Discordance Between Morphological And Taxonomic Diversity: Land Snails Of Oceanic Archipelagos, Kostas Triantis, François Rigal, Christine Parent, Kenneth Hayes

Department of Biology Faculty Publications

AimMorphological and taxonomic diversity are intuitive measures of biological diversity. Previous studies have shown discordance between these measures at large spatial and temporal scales, but the implications of this pattern for the underlying processes are not understood. Using oceanic archipelagos as spatial units, we examine potential links between the morphological and taxonomic diversity of their land snail faunas in a biogeographical framework.LocationEleven major oceanic archipelagos.MethodsFor each archipelago, we assembled lists of indigenous land snail species, classified by family and genus, with shell height and width for each species (1723 species in total). We used biogeographic and climatic variables as potential …

Antiretroviral Drugs-Loaded Nanoparticles Fabricated By Dispersion Polymerization With Potential For Hiv/Aids Treatment, Winston Anderson

Department of Biology Faculty Publications

Highly active antiretroviral (ARV) therapy (HAART) for chronic suppression of HIV replication has revolutionized the treatment of HIV/AIDS. HAART is no panacea; treatments must be maintained for life. Although great progress has been made in ARV therapy, HIV continues to replicate in anatomical and intracellular sites where ARV drugs have restricted access. Nanotechnology has been considered a platform to circumvent some of the challenges in HIV/AIDS treatment. Dispersion polymerization was used to fabricate two types (PMM and ECA) of polymeric nanoparticles, and each was successfully loaded with four ARV drugs (zidovudine, lamivudine, nevirapine, and raltegravir), followed by physicochemical characterization: scanning …

Biological Sciences Newsletter - March 2016, Department Of Biological Sciences, East Tennessee State University

Biological Sciences Newsletters

No abstract provided.

Challenges And Opportunities In The Culture Of Giant Freshwater Prawn In The Philippines, Janice A. Ragaza

Biology Faculty Publications

Amid the irremediable decline of capture fisheries, the Philippine government has identified aquaculture as a sector that will ensure food security and generate new job opportunities geared toward the country’s goal of economic development (Nagothu and Ortiz 2007). Aquaculture of giant freshwater prawn Macrobrachium rosenbergii (Fig. 1) is an emerging program that is intended to expand and vary the aquatic species used in freshwater aquaculture, which is still predominantly based on tilapia (Rosario and Tayamen 2004). Attractive characteristics of freshwater prawn culture include ease of breeding, high hatching rate, superior quality of meat and high market value (Keysami and Mohammadpour …

Combined Effects Of Pesticides And Trematode Infections On Hourglass Tree Frog Polypedates Cruciger., Uthpala A. Jayawardena, Jason R. Rohr, Ayanthi N. Navaratne, Priyanie H. Amerasinghe, Rupika S. Rajakaruna

Integrative Biology Faculty and Staff Publications

The impact of widespread and common environmental factors, such as chemical contaminants, on infectious disease risk in amphibians is particularly important because both chemical contaminants and infectious disease have been implicated in worldwide amphibian declines. Here we report on the lone and combined effects of exposure to parasitic cercariae (larval stage) of the digenetic trematode, Acanthostomum burminis, and four commonly used pesticides (insecticides: chlorpyrifos, dimethoate; herbicides: glyphosate, propanil) at ecologically relevant concentrations on the survival, growth, and development of the common hourglass tree frog, Polypedates cruciger Blyth 1852. There was no evidence of any pesticide-induced mortality on cercariae because all …

Associations Between Ectomycorrhizal Fungi And Bacterial Needle Endophytes In Pinus Radiata: Implications For Biotic Selection Of Microbial Communities, Megan A. Rúa, Emily C. Wilson, Sarah Steele, Arielle R. Munters, Jason D. Hoeksema, Anna C. Frank

Biological Sciences Faculty Publications

Studies of the ecological and evolutionary relationships between plants and their associated microbes have long been focused on single microbes, or single microbial guilds, but in reality, plants associate with a diverse array of microbes from a varied set of guilds. As such, multitrophic interactions among plant-associated microbes from multiple guilds represent an area of developing research, and can reveal how complex microbial communities are structured around plants. Interactions between coniferous plants and their associated microbes provide a good model system for such studies, as conifers host a suite of microorganisms including mutualistic ectomycorrhizal (ECM) fungi and foliar bacterial endophytes. …

Life Line March 2016, Otterbein Biology And Earth Science Department

Life Line - The Biology Department Newsletter

Department welcomes Dr. Elizabeth Berkeley - Ben Titus '08 - Panama Research - Fracing in Toga County, PA. - Students Intern in China - Faculty Partnerships in Africa

Molecular Analyses Of Circadian Gene Variants Reveal Sex-Dependent Links Between Depression And Clocks, S-Q Shi, M. J. White, H. M. Borsetti, Julie S. Pendergast, A. Hida, C. M. Ciarleglio, P. A. De Verteuil, A. G. Cadar, C. Cala, D. G. Mcmahon, R. C. Shelton, S. M. Williams, C. H. Johnson

Biology Faculty Publications

An extensive literature links circadian irregularities and/or sleep abnormalities to mood disorders. Despite the strong genetic component underlying many mood disorders, however, previous genetic associations between circadian clock gene variants and major depressive disorder (MDD) have been weak. We applied a combined molecular/functional and genetic association approach to circadian gene polymorphisms in sex-stratified populations of control subjects and case subjects suffering from MDD. This approach identified significant sex-dependent associations of common variants of the circadian clock genes hClock, hPer3 and hNpas2 with major depression and demonstrated functional effects of these polymorphisms on the expression or activity of the hCLOCK …

Responses Of Female Burrowing Owls To Alterations In Clutch Size: Are Burrowing Owls Determinate Or Indeterminate Egg-Layers?, Jamie L. Wade, James R. Belthoff

Biology Faculty Publications and Presentations

Bird species, including raptors, can often be categorized into two groups depending upon their response to alterations in clutch size while laying. For some, clutch size is predetermined prior to the start of laying (i.e., determinate species). In contrast, the clutch size of indeterminate layers can be influenced by external factors present at the time of laying. Using field experiments, our objective was to examine the egg-laying responses of female Western Burrowing Owls (Athene cunicularia hypugaea) to manipulations of clutch size. To assess whether Burrowing Owls are determinate or indeterminate egg-layers, we altered female clutch size by removing …

Effects Of Researcher-Induced Disturbance On American Kestrels Breeding In Nest Boxes In Northwestern New Jersey, John Smallwood

Department of Biology Faculty Scholarship and Creative Works

Nest boxes for American Kestrels Falco sparverius may alleviate local nest site limitation, but there is concern that periodically opening nest boxes or handling adults may negatively affect nesting success. I monitored 536 kestrel breeding attempts ≥1 egg laid in about 100 nest boxes in northwestern New Jersey, 1995-2012. To study return rates, I opportunistically captured adults in nest boxes and marked them with U.S.G.S. leg bands and patagial tags. To examine possible effects of this disturbance, I compared nesting success ≥1 nestling surviving to banding age of marked and unmarked adults. Nesting success was 67% for 270 unmarked pairs, …

Ne Stem 4u: An Out-Of-School Time Academic Program To Improve Achievement Of Socioeconomically Disadvantaged Youth In Stem Areas, Christine E. Cutucache, Jamie L. Luhr, Kari L. Nelson, Neal Grandgenett, William E. Tapprich

Biology Faculty Publications

Background

The Nebraska Science, Technology, Engineering, and Mathematics 4U (NE STEM 4U) program was initiated at the University of Nebraska at Omaha (UNO) in 2013. NE STEM 4U is a student-run, faculty-led program facilitating problem-based learning (PBL) sessions in science, technology, engineering, and mathematics (STEM) for socioeconomically disadvantaged kindergarten through grade 8 (K-8) students. PBL sessions are provided throughout the academic year in a twice-weekly, after-school, informal education program. The instructional material provided after school builds upon the curricula of the school day. Importantly, this program is a partnership between faculty members and administrators in higher education at UNO with …

Shaping The Growth Behaviour Of Biofilms Initiated From Bacterial Aggregates, Gavin Melaugh, Jaime B. Hutchison, Kasper N. Kragh, Yasuhiko Irie, Aled E. L. Roberts, Thomas Bjarnsholt, Stephen P. Diggle, Vernita Gordon, Rosalind J. Allen

Biology Faculty Publications

Bacterial biofilms are usually assumed to originate from individual cells deposited on a surface. However, many biofilm-forming bacteria tend to aggregate in the planktonic phase so that it is possible that many natural and infectious biofilms originate wholly or partially from pre-formed cell aggregates. Here, we use agent-based computer simulations to investigate the role of pre-formed aggregates in biofilm development. Focusing on the initial shape the aggregate forms on the surface, we find that the degree of spreading of an aggregate on a surface can play an important role in determining its eventual fate during biofilm development. Specifically, initially spread …

Phylogenetic Relationships Of Cottids (Pisces: Cottidae) In Upper Snake River Basin Of Western North America, Sun Yeong Oh

Theses and Dissertations

Freshwater sculpins (Cottus) are common throughout temperate regions of the Northern Hemisphere. Their broad distribution in the Western North America makes them a good model for understanding phylogeographic relationships among western fishes. Within much of the interior west three lineages, C. bairdii, C. confusus, and the C. beldingii complex, are most prevalent. The distribution of these three overlap in the Snake River Basin. All occur below Shoshone Falls on the Snake River. However, only two currently reside in the Upper Snake River above the falls. An exception are the Lost River streams of central Idaho. While …

Role Of Multicellular Aggregates In Biofilm Formation, Kasper N. Kragh, Jaime B. Hutchison, Gavin Melaugh, Chris Rodesney, Aled E. L. Roberts, Yasuhiko Irie, Peter Ø. Jensen, Stephen P. Diggle, Rosalind J. Allen, Vernita Gordon, Thomas Bjarnsholt

Biology Faculty Publications

In traditional models of in vitro biofilm development, individual bacterial cells seed a surface, multiply, and mature into multicellular, three-dimensional structures. Much research has been devoted to elucidating the mechanisms governing the initial attachment of single cells to surfaces. However, in natural environments and during infection, bacterial cells tend to clump as multicellular aggregates, and biofilms can also slough off aggregates as a part of the dispersal process. This makes it likely that biofilms are often seeded by aggregates and single cells, yet how these aggregates impact biofilm initiation and development is not known.

Here we use a combination of …

Ectomycorrhizal Fungi Decompose Soil Organic Matter Using Oxidative Mechanisms Adapted From Saprotrophic Ancestors, Firoz Shah, César Nicolás, Johan Bentzer, Magnus Ellström, Mark Smits, Francois Rineau, Björn Canbäck, Dimitrios Floudas, Robert Carleer, Gerald Lackner, Jana Braesel, Dirk Hoffmeister, Bernard Henrissat, Dag Ahrén, Tomas Johansson, David S. Hibbett, Francis Martin, Per Persson, Anders Tunlid

Biology

Ectomycorrhizal fungi are thought to have a key role in mobilizing organic nitrogen that is trapped in soil organic matter (SOM). However, the extent to which ectomycorrhizal fungi decompose SOM and the mechanism by which they do so remain unclear, considering that they have lost many genes encoding lignocellulose-degrading enzymes that are present in their saprotrophic ancestors. Spectroscopic analyses and transcriptome profiling were used to examine the mechanisms by which five species of ectomycorrhizal fungi, representing at least four origins of symbiosis, decompose SOM extracted from forest soils. In the presence of glucose and when acquiring nitrogen, all species converted …

Alternative Regulation Of Myc In Lung Cancer, Patrick N. Backman

Open Access Theses

Lung cancer is the leading cause of cancer deaths in the United States, accounting for 27% of all cancer induced deaths1. In an attempt to create a effective targeted therapy for the treatment of lung cancer, a strategy used to treat an activated KrasG12D/+;p53 R172H/+ transgenic lung cancer mouse model was to deliver a known tumor suppressive microRNA (miRNA) to stop tumor growth. The tumor suppressive miRNA let-7 was lentivirally delivered in the form of its primary transcript, pri-let-7a-1, and resulted in increased lung size and inflammation compared to lungs exposed to a control lentivirus. It was identified …

Identification Of Plant Extracts That Inhibit The Formation Of Diabetes-Linked Iapp Amyloid, Ana Lucia Fuentes, Kathleen Hennessy, Jacob Pascual, Nicole Pepe, In Wang, Cynthia Chaggan, Jessica Martinez, Evelyn Rivera, Paola Cota, Christina Cunha, Luiza A. Nogaj, David A. Moffet

Chemistry and Biochemistry Faculty Works

The extracts of 27 vegetables, spices and herbs were screened for their functional ability to inhibit the aggregation of islet amyloid polypeptide (IAPP, amylin) into toxic amyloid aggregates. The aggregation of IAPP has been directly linked to the death of pancreatic β-islet cells in type 2 diabetes. Inhibiting the aggregation of IAPP is believed to have the potential to slow, if not prevent entirely, the progression of this disease. As vegetables, spices and herbs are known to possess many different positive health effects, the extracts of 27 plants (abundant within the United States and spanning several plant families) were screened …

The Subject Librarian Newsletter, Biology, Spring 2016, Patti Mccall

Libraries' Newsletters

No abstract provided.

How Important Is A Postdoc For A Teaching Career?, Amy Cheng Vollmer, V. Balke, C. Frantz, T. E. Hanson

Biology Faculty Works

No abstract provided.

Genetic Structure Of Micromeria (Lamiaceae) In Tenerife, The Imprint Of Geological History And Hybridization On Within-Island Diversification, Pamela Puppo, Manuel Curto, Harald Meimberg

Biological Sciences Faculty Research

Geological history of oceanic islands can have a profound effect on the evolutionary history of insular flora, especially in complex islands such as Tenerife in the Canary Islands. Tenerife results from the secondary connection of three paleo-islands by a central volcano, and other geological events that further shaped it. This geological history has been shown to influence the phylogenetic history of several taxa, including genus Micromeria (Lamiaceae). Screening 15 microsatellite markers in 289 individuals representing the eight species of Micromeria present in Tenerife, this study aims to assess the genetic diversity and structure of these species and its relation with …

Human Xq28 Inversion Polymorphism: From Sex Linkage To Genomics - A Genetic Mother Lode, Cait S. Kirby, Natalie Kolber, Asmaa M. Salih Almohaidi, Lou Ann Bierwert, Lori Saunders, Steven Williams, Robert Merritt

Biological Sciences: Faculty Publications

An inversion polymorphism of the filamin and emerin genes at the tip of the long arm of the human X-chromosome serves as the basis of an investigative laboratory in which students learn something new about their own genomes. Long, nearly identical inverted repeats flanking the filamin and emerin genes illustrate how repetitive elements can lead to alterations in genome structure (inversions) through nonallelic homologous recombination. The near identity of the inverted repeats is an example of concerted evolution through gene conversion. While the laboratory in its entirety is designed for college level genetics courses, portions of the laboratory are appropriate …

Mechanisms Of Methane Transport Through Populus Trichocarpa, Ellynne Marie Kutschera, M. A. K. Khalil, Andrew Rice, Todd Rosenstiel

Physics Faculty Publications and Presentations

Although the dynamics of methane (CH4) emission from croplands and wetlands have been fairly well investigated, the contribution of trees to global CH4 emission and the mechanisms of tree transport are relatively unknown. CH4 emissions from the common wetland tree species Populus trichocarpa (black cottonwood) native to the Pacific Northwest were measured under hydroponic conditions in order to separate plant transport mechanisms from the influence of soil processes. Roots were exposed to CH4 enriched water and canopy emissions of CH4 were measured. The average flux for 34 trials (at temperatures ranging from 17 to 25 °C) was 2.8 ± 2.2 …

A Measurement Of Historical And Contemporary Functional Diversity On The Monahan Reclaimed Grassland, Jacob A. Heil

Electronic Theses & Dissertations

In 1984 a portion of the Monahan, a PSU Biology field site, was reclaimed to establish a native grassland community and to prevent runoff of acidic groundwater. In the years since then, several student projects have analyzed the vegetation community on the site, estimating the biodiversity found there. In this study, conducted in 2014, the biodiversity of the Monahan was measured using four indices of functional diversity. Functional diversity describes the variety of ecological functions in a community; functional diversity indices measure and describe these functions instead of individual species. Results from two past graduate theses were compared to the …

Engineered Protein Polymer-Gold Nanoparticle Hybrid Materials For Small Molecule Delivery, Min Dai, Ja Frezzo, E Sharma, R Chen, N Singh, C Yuvienco, E Caglar, S Xiao, A Saxena, Jk Montclare

Publications and Research

We have fabricated protein polymer-gold nanoparticle (P-GNP) nanocomposites that exhibit enhanced binding and delivery properties of the small hydrophobic molecule drug, curcumin, to the model breast cancer cell line, MCF-7. These hybrid biomaterials are constructed via in situ GNP templated-synthesis with genetically engineered histidine tags. The P-GNP nanocomposites exhibit enhanced small molecule loading, sustained release and increased uptake by MCF-7 cells. When compared to the proteins polymers alone, the P-GNPs demonstrate a greater than 7-fold increase in curcumin binding, a nearly 50% slower release profile and more than 2-fold increase in cellular uptake of curcumin. These results suggest that P-GNP …

Transcriptome And Biochemical Analysis Of A Flower Color Polymorphism In Silene Littorea (Caryophyllaceae), Inés Casimiro-Soriguer, Eduardo Narbona, Mª L. Buide, José C. Del Valle, Justen B. Whittall

Biology

Flower color polymorphisms are widely used as model traits from genetics to ecology, yet determining the biochemical and molecular basis can be challenging. Anthocyanin-based flower color variations can be caused by at least 12 structural and three regulatory genes in the anthocyanin biosynthetic pathway (ABP). We use mRNA-Seq to simultaneously sequence and estimate expression of these candidate genes in nine samples of Silene littorea representing three color morphs (dark pink, light pink, and white) across three developmental stages in hopes of identifying the cause of flower color variation. We identified 29 putative paralogs for the 15 candidate genes in the …

What, If Anything, Are Hybrids: Enduring Truths And Challenges Associated With Population Structure And Gene Flow, Zachariah Gompert, C. Alex Buerkle

Biology Faculty Publications

Hybridization is a potent evolutionary process that can affect the origin, maintenance, and loss of biodiversity. Because of its ecological and evolutionary consequences, an understanding of hybridization is important for basic and applied sciences, including conservation biology and agriculture. Herein, we review and discuss ideas that are relevant to the recognition of hybrids and hybridization. We supplement this discussion with simulations. The ideas we present have a long history, particularly in botany, and clarifying them should have practical consequences for managing hybridization and gene flow in plants. One of our primary goals is to illustrate what we can and cannot …