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Full-Text Articles in Biology

A Review Of Baobab (Adansonia Digitata) Products: Effect Of Processing Techniques, Medicinal Properties And Uses, Donatien Kabore, Hagrétou Sawadogo-Lingani, Bréhima Diawara, Clarise Compaoré, Mamoudou H. Dicko Prof., Mogens Jacobsen Dec 2011

A Review Of Baobab (Adansonia Digitata) Products: Effect Of Processing Techniques, Medicinal Properties And Uses, Donatien Kabore, Hagrétou Sawadogo-Lingani, Bréhima Diawara, Clarise Compaoré, Mamoudou H. Dicko Prof., Mogens Jacobsen

Pr. Mamoudou H. DICKO, PhD

A general literature review including the effect of processing techniques, medicinal value and uses of baobab tree is reported in this manuscript. Baobab tree has multi-purpose uses, as it produces food and non-food products such as medicines, fuel, timber, fodder. Every part of the baobab tree is reported to be useful. The seeds, leaves, roots, flowers, fruit pulp and bark of baobab are edible. Baobab leaves are used in the preparation of soup. Seeds are used as a thickening agent in soups, but they can be fermented and used as a flavouring agent or roasted and eaten as snacks. The …


Arcane Secrets Of The Umass Libraries, Maxine G. Schmidt Sep 2011

Arcane Secrets Of The Umass Libraries, Maxine G. Schmidt

Maxine G Schmidt

No abstract provided.


Testing The Potential Of Using Fungi To Convert Human Waste Into Protein, Alex Zapata, Elizabeth Phillippi, Blair Mitchell, Jon Schoer, Michael Watters Aug 2011

Testing The Potential Of Using Fungi To Convert Human Waste Into Protein, Alex Zapata, Elizabeth Phillippi, Blair Mitchell, Jon Schoer, Michael Watters

Michael Watters

We report on the results of a pilot experiment designed to test the potential of filamentous fungi (mold) to reduce solid waste (feces) while converting it into a consumable, high protein food product. Feces represent an untapped resource. Filamentous fungi are natural decomposers with the ability to use this resource. Many filamentous fungi are safe to eat. We examined growth in order to determine the conditions which maximized the rate of conversion of solid waste into fungal biomass. For this pilot, we compared the effect of different lengths of incubation, different methods of aeration, and different available surface area. The …


Efficient Unfolding Pattern Recognition In Single Molecule Force Spectroscopy Data, Bill Andreopoulos, Dirk Labudde Jun 2011

Efficient Unfolding Pattern Recognition In Single Molecule Force Spectroscopy Data, Bill Andreopoulos, Dirk Labudde

William B. Andreopoulos

Background
Single-molecule force spectroscopy (SMFS) is a technique that measures the force necessary to unfold a protein. SMFS experiments generate Force-Distance (F-D) curves. A statistical analysis of a set of F-D curves reveals different unfolding pathways. Information on protein structure, conformation, functional states, and inter- and intra-molecular interactions can be derived.

Results
In the present work, we propose a pattern recognition algorithm and apply our algorithm to datasets from SMFS experiments on the membrane protein bacterioRhodopsin (bR). We discuss the unfolding pathways found in bR, which are characterised by main peaks and side peaks. A main peak is the result …


Science Boot Camp For Librarians: Cpd On A Shoestring, Maxine G. Schmidt, Rebecca Reznik-Zellen May 2011

Science Boot Camp For Librarians: Cpd On A Shoestring, Maxine G. Schmidt, Rebecca Reznik-Zellen

Maxine G Schmidt

Science Boot Camp for Librarians was envisioned as a casual but intensive immersion event into selected scientific subjects that employ networked computing capabilities for research and collaboration. The goal of the event is to provide librarians with networking opportunities, but more importantly, to give them some of the context and ocabulary of a discipline to enable them to better engage faculty and research scientists with regard to escience. A half-day is devoted to each of three topics chosen for that year’s camp. A local faculty member provides an overview of the research area, and a second describes a single project …


Antimicrobial And Antioxidant Activities Of Essential Oil And Methanol Extract Of Matricaria Chamomilla L. From Djibouti, Fatouma M. Abdoul-Latif, Mohamed Nabil, Prosper Edou, Adwa A. Ali, Samatar O. Djama, Louis-Clément Obamé, Mamoudou H. Dicko Prof. May 2011

Antimicrobial And Antioxidant Activities Of Essential Oil And Methanol Extract Of Matricaria Chamomilla L. From Djibouti, Fatouma M. Abdoul-Latif, Mohamed Nabil, Prosper Edou, Adwa A. Ali, Samatar O. Djama, Louis-Clément Obamé, Mamoudou H. Dicko Prof.

Pr. Mamoudou H. DICKO, PhD

The essential oil and methanol extracts of Matricaria Chamomilla L. were subjected to screening for their possible antioxidant activity by two complementary test systems, namely 2,2-diphenykpicrylhydrazyl (DPPH) free radical scavenging and β-carotene-linoleic acid assays. BHT was used as positive control in both test systems. In the DPPH test system, the IC50 values of essential oil and methanol extracts were 4.18 and 1.83 μg/ml, respectively. In the β-carotene-linoleic acid system, oxidation was effectively inhibited by M. Chamomilla, the RAA value of essential oil and methanol extracts were 12.69 and 11.37 %, respectively. When compared to BHT, the essential oil and methanol …


Biodepollution Of Wastewater Containing Phenolic Compounds From Leather Industry By Plant Peroxidases, Mamounata Diao, Nafissetou Ouedraogo, Lamine Baba-Moussa, Paul W. Savadogo, Georges N'Guessan Amani, Mamoudou H. Dicko Prof. Jan 2011

Biodepollution Of Wastewater Containing Phenolic Compounds From Leather Industry By Plant Peroxidases, Mamounata Diao, Nafissetou Ouedraogo, Lamine Baba-Moussa, Paul W. Savadogo, Georges N'Guessan Amani, Mamoudou H. Dicko Prof.

Pr. Mamoudou H. DICKO, PhD

This study deals with the use of peroxidases (POXs) from Allium sativum, Ipomoea batatas, Raphanus sativus and Sorghum bicolor to catalyze the degradation of free phenolic compounds as well as phenolic compounds contained in wastewater from leather industry. Secretory plant POXs were able to catalyze the oxidation of gallic acid, ferulic acid, 4-hydroxybenzoic acid, pyrogallol and 1,4-tyrosol prepared in ethanol 2% (v:v). Efficiency of peroxidase catalysis depends strongly on the chemical nature of phenolic substrates and on the botanical source of the enzymes. It appeared that POX from Raphanus sativus had the highest efficiency. Results show that POXs can also …


In Vivo Measurement Of Plant Respiration, M. Ribas-Carbo, J. Flexas, Sharon A. Robinson, G. G.B. Tcherkez Jan 2011

In Vivo Measurement Of Plant Respiration, M. Ribas-Carbo, J. Flexas, Sharon A. Robinson, G. G.B. Tcherkez

Sharon Robinson

Respiration is vital; it is the essence of life. Respiration is the mechanism by which energy obtained during the photosynthesis process is transformed into biochemical energy, in the form of ATP. This transformation of energy keeps all cells in all organisms alive. While energy conversion is the main function of respiration in animals, respiration has several other functions in plants. Among them, interactions with photosynthesis such as photorespiration and the production of carbon skeletons for the many compounds synthesized in plants (e.g., pigments, proteins and secondary metabolites). Therefore, it comes as no surprise that such a key role of respiration …


Using An Unmanned Aerial Vehicle (Uav) For Ultra-High Resolution Mapping Of Antarctic Moss Beds, Arko Lucieer, Sharon A. Robinson, Darren Turner Jan 2011

Using An Unmanned Aerial Vehicle (Uav) For Ultra-High Resolution Mapping Of Antarctic Moss Beds, Arko Lucieer, Sharon A. Robinson, Darren Turner

Sharon Robinson

This study is the first to use an unmanned aerial vehicle (UAV) for mapping moss beds in Antarctica. Mosses can be used as indicators for the regional effects of climate change. Mapping and monitoring their extent and health is therefore important. UAV aerial photography provides ultra-high resolution spatial data for this purpose. In addition, we collected highly accurate and GPS transects to generate a detailed DEM. We calculated a topographic wetness index based on the DEM and compared it to the UAV photography to evaluate local growing conditions. This preliminary study shows that a UAV is an ideal platform for …


Light Interception And Utilisation, Sharon A. Robinson, J. R. Watling Jan 2011

Light Interception And Utilisation, Sharon A. Robinson, J. R. Watling

Sharon Robinson

Initial steps of photosynthesis involve interception and absorption of photons by photosynthetic organs; subsequent steps are involved with utilisation or dissipation of quantum energy so derived. Interception of light varies according to size, angle, orientation and surface features of the photosynthetic organ(s) and is also influenced by changes in the arrangement of photosynthetic tissue within those organs.


Casey: The Daintree Of Antarctica, Dana Bergstrom, Sharon A. Robinson Jan 2011

Casey: The Daintree Of Antarctica, Dana Bergstrom, Sharon A. Robinson

Sharon Robinson

Antarctica is at the edge of life on the planet. Less than 0.5% of the Antarctic continent is ice-free rock or soil and therefore only tiny pockets of land are available for plants to establish. The Australian Antarctic Territory is home to some of the rarest ecosystems on the planet and the plant life at Casey is as good as it gets - Casey has the most extensive and best developed plant communities in continental Antarctica: it is the 'Daintree' of Antarctica. The largest plants are the mosses and they are like miniature old growth forests, growing incredibly slowly. A …


Aerial ‘Oktokopter’ To Map Antarctic Moss, Arko Lucieer, Sharon A. Robinson, Dana Bergstrom Jan 2011

Aerial ‘Oktokopter’ To Map Antarctic Moss, Arko Lucieer, Sharon A. Robinson, Dana Bergstrom

Sharon Robinson

Polar regions are experiencing rapid and severe climatic shifts with major changes in temperature, wind speed and UV-B radiation already observed in Antarctica. As climatic records only extend back 50 years, we urgently need new proxies to determine if coastal climate has changed over the past century.


110 Years Of Avipoxvirus In The Galapagos Islands, Robert Ricklefs Jan 2011

110 Years Of Avipoxvirus In The Galapagos Islands, Robert Ricklefs

Robert Ricklefs

No abstract provided.


110 Years Of Avipoxvirus In The Galapagos Islands, Patricia G. Parker, Elizabeth L. Buckles, Heather L. Farrington, Kenneth Petren, Noah K. Whiteman, Robert E. Ricklefs, Jennifer L. Bollmer, Gustavo Jiménez-Uzcátegui Jan 2011

110 Years Of Avipoxvirus In The Galapagos Islands, Patricia G. Parker, Elizabeth L. Buckles, Heather L. Farrington, Kenneth Petren, Noah K. Whiteman, Robert E. Ricklefs, Jennifer L. Bollmer, Gustavo Jiménez-Uzcátegui

Patricia Parker

The role of disease in regulating populations is controversial, partly owing to the absence of good disease records in historic wildlife populations. We examined birds collected in the Galapagos Islands between 1891 and 1906 that are currently held at the California Academy of Sciences and the Zoologisches Staatssammlung Muenchen, including 3973 specimens representing species from two well-studied families of endemic passerine birds: finches and mockingbirds. Beginning with samples collected in 1899, we observed cutaneous lesions consistent with Avipoxvirus on 226 (6.3%) specimens. Histopathology and viral genotyping of 59 candidate tissue samples from six islands showed that 21 (35.6%) were positive …


Prevalence Of Piscine Myocarditis Virus (Pmcv) In Marine Fish Species, Torstein Tengs Dr. Jan 2011

Prevalence Of Piscine Myocarditis Virus (Pmcv) In Marine Fish Species, Torstein Tengs Dr.

Dr. Torstein Tengs

No abstract.


Asymmetry In Chemical Structures And In Life: My Last Two Articles, Otto Vogl Jan 2011

Asymmetry In Chemical Structures And In Life: My Last Two Articles, Otto Vogl

Otto Vogl

No abstract provided.


Center Of Umass – Industry Research On Polymers: Cumirp: Inception And Founding, Otto Vogl Jan 2011

Center Of Umass – Industry Research On Polymers: Cumirp: Inception And Founding, Otto Vogl

Otto Vogl

No abstract provided.


Polymer Science And The Arts: Oriental Lacquer, Otto Vogl Jan 2011

Polymer Science And The Arts: Oriental Lacquer, Otto Vogl

Otto Vogl

No abstract provided.


Closing The Loop: Involving Faculty In The Assessment Of Scientific And Quantitative Reasoning Skills Of Biology Majors, C. A. Hurney, J. Brown, H. P. Griscom, E. Kancler, C. J. Wigtil, Donna L. Sundre Dec 2010

Closing The Loop: Involving Faculty In The Assessment Of Scientific And Quantitative Reasoning Skills Of Biology Majors, C. A. Hurney, J. Brown, H. P. Griscom, E. Kancler, C. J. Wigtil, Donna L. Sundre

Donna L. Sundre

No abstract provided.


Epoxi: Comet 103p/Hartley 2 Observations From A Worldwide Campaign ; Astrophysical Journal Letters, K. J. Meech, M. F. A'Hearn, J. A. Adams, P. Bacci, J. Bai, L. Barrera, M. Battelino, J. M. Bauer, E. Becklin, B. Bhatt, N. Biver, D. Bockelee-Morvan, D. Bodewits, H. Bohnhardt, J. Boissier, B. P. Bonev, W. Borghini, J. R. Brucato, E. Bryssinck, M. W. Buie, H. Canovas, D. Castellano, S. B. Charnley, W. P. Chen, P. Chiang, Y. J. Choi, D. J. Christian, Y. L. Chuang, Anita L. Cochran, P. Colom, M. R. Combi, I. M. Coulson, J. Crovisier, N. Dello Russo, K. Dennerl, K. Dewahl, M. A. Disanti, M. Facchini, T. L. Farnham, Y. Fernandez, H. G. Floren, U. Frisk, T. Fujiyoshi, R. Furusho, T. Fuse, G. Galli, D. A. Garcia-Hernandez, A. Gersch, Z. Getu Dec 2010

Epoxi: Comet 103p/Hartley 2 Observations From A Worldwide Campaign ; Astrophysical Journal Letters, K. J. Meech, M. F. A'Hearn, J. A. Adams, P. Bacci, J. Bai, L. Barrera, M. Battelino, J. M. Bauer, E. Becklin, B. Bhatt, N. Biver, D. Bockelee-Morvan, D. Bodewits, H. Bohnhardt, J. Boissier, B. P. Bonev, W. Borghini, J. R. Brucato, E. Bryssinck, M. W. Buie, H. Canovas, D. Castellano, S. B. Charnley, W. P. Chen, P. Chiang, Y. J. Choi, D. J. Christian, Y. L. Chuang, Anita L. Cochran, P. Colom, M. R. Combi, I. M. Coulson, J. Crovisier, N. Dello Russo, K. Dennerl, K. Dewahl, M. A. Disanti, M. Facchini, T. L. Farnham, Y. Fernandez, H. G. Floren, U. Frisk, T. Fujiyoshi, R. Furusho, T. Fuse, G. Galli, D. A. Garcia-Hernandez, A. Gersch, Z. Getu

Erika Gibb

Earth- and space-based observations provide synergistic information for space mission encounters by providing data over longer timescales, at different wavelengths and using techniques that are impossible with an in situ flyby. We report here such observations in support of the EPOXI spacecraft flyby of comet 103P/Hartley 2. The nucleus is small and dark, and exhibited a very rapidly changing rotation period. Prior to the onset of activity, the period was ~16.4 hr. Starting in 2010 August the period changed from 16.6 hr to near 19 hr in December. With respect to dust composition, most volatiles and carbon and nitrogen isotope …


Predicting Flavonoid Ugt Regioselectivity, Arthur R. Jackson, Debra Knisley, Cecilia Mcintosh, Phillip Pfeiffer Dec 2010

Predicting Flavonoid Ugt Regioselectivity, Arthur R. Jackson, Debra Knisley, Cecilia Mcintosh, Phillip Pfeiffer

Cecilia A. McIntosh

Machine learning was applied to a challenging and biologically significant protein classification problem: the prediction of avonoid UGT acceptor regioselectivity from primary sequence. Novel indices characterizing graphical models of residues were proposed and found to be widely distributed among existing amino acid indices and to cluster residues appropriately. UGT subsequences biochemically linked to regioselectivity were modeled as sets of index sequences. Several learning techniques incorporating these UGT models were compared with classifications based on standard sequence alignment scores. These techniques included an application of time series distance functions to protein classification. Time series distances defined on the index sequences were …