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Biological Sciences Faculty Publications

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Articles 931 - 960 of 1156

Full-Text Articles in Biology

Experimental Model Of Human Body Louse Infection Using Green Fluorescent Protein-Expressing Bartonella Quintana, Pierre-Edouard Fournier, Michael F. Minnick, Hubert Lepidi, Eric Salvo, Didier Raoult Mar 2001

Experimental Model Of Human Body Louse Infection Using Green Fluorescent Protein-Expressing Bartonella Quintana, Pierre-Edouard Fournier, Michael F. Minnick, Hubert Lepidi, Eric Salvo, Didier Raoult

Biological Sciences Faculty Publications

A laboratory colony of human body lice was experimentally infected by feeding on rabbits made artificially bacteremic with a green fluorescent protein-expressing Bartonella quintana. B. quintana was detected in the gut and feces until death but not in the eggs. The life span of the lice was not modified. The rabbit model should provide valuable clues to the role of lice in the transmission of B. quintana.

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Antibody Binding And Neutralization Of Primary And T-Cell Line-Adapted Isolates Of Human Immunodeficiency Virus Type 1, Joanne York, Kathryn E. Follis, Meg Trahey, Phillipe N. Nyambi, Susan Zolla-Pazner, Jack H. Nunberg Mar 2001

Antibody Binding And Neutralization Of Primary And T-Cell Line-Adapted Isolates Of Human Immunodeficiency Virus Type 1, Joanne York, Kathryn E. Follis, Meg Trahey, Phillipe N. Nyambi, Susan Zolla-Pazner, Jack H. Nunberg

Biological Sciences Faculty Publications

The relative resistance of human immunodeficiency virus type 1 (HIV-1) primary isolates (PIs) to neutralization by a wide range of antibodies remains a theoretical and practical barrier to the development of an effective HIV vaccine. One model to account for the differential neutralization sensitivity between Pls and laboratory (or T-cell line-adapted [TCLA]) strains of HN suggests that the envelope protein (Env) complex is made more accessible to antibody binding as a consequence of adaptation to growth in established cell lines. Here, we revisit this question using genetically related PI and TCLA viruses and molecularly cloned env genes. By using complementary …

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Development Of Microsatellite Multiplexes For Wild Goats Using Primers Designed From Domestic Bovidae, Celia Maudet, Gordon Luikart, Pierre Taberlet Jan 2001

Development Of Microsatellite Multiplexes For Wild Goats Using Primers Designed From Domestic Bovidae, Celia Maudet, Gordon Luikart, Pierre Taberlet

Biological Sciences Faculty Publications

Many wild goat taxa (Capra spp.) are endangered and would benefit from the availability of molecular tools that are useful for population management and conservation. We developed microsatellite DNA markers useful in all wild goat species, by using a cross-species amplification approach. Seventy-five microsatellite primer pairs designed from domestic cattle (Bos taurus), sheep (Ovis aries) and goat (Capra hircus) were tested oil three distantly related Capra species: C. ibex ibex, C. [i.] sibirica, and C. pyrenaica. On average, 90% of the domestic ungulate primers amplified a microsatellite PCR product in the …

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Classification And Identification Of Pfiesteria And Pfiesteria-Like Species, Karen Steidinger, Jan Landsberg, R. William Richardson, Earnest Truby, Barbara Blakesley, Paula Scott, Patricia Tester, Torstein Tengs, Patrice Mason, Stever Morton, David Seaborn, Wayne Litaker, Kimberly Reece, David Oldach, Leonard Haas, Gerardo Vasta Jan 2001

Classification And Identification Of Pfiesteria And Pfiesteria-Like Species, Karen Steidinger, Jan Landsberg, R. William Richardson, Earnest Truby, Barbara Blakesley, Paula Scott, Patricia Tester, Torstein Tengs, Patrice Mason, Stever Morton, David Seaborn, Wayne Litaker, Kimberly Reece, David Oldach, Leonard Haas, Gerardo Vasta

Biological Sciences Faculty Publications

Dinoflagellates can be classified both botanically and zoologically; however, they are typically put in the botanical division Pyrrhophyta. As a group they appear most related to the protistan ciliates and apicomplexans at the ultrastructure level. Within the Pyrrhophyta are both unarmored and armored forms of the dominant, motile flagellated stage. Unarmored dinoflagellates do not have thecal or wall plates arranged in specific series, whereas armored species have plates that vary in thickness but are specific in number and arrangement. In armored dinoflagellates, the plate pattern and tabulation is a diagnostic character at the family, subfamily, and even genus levels. In …

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Acclimation To Hypoxia Increases Survival Time Of Zebrafish, Danio Rerio, During Lethal Hypoxia, Bernard B. Rees, F Sudradjat, J W. Love Jan 2001

Acclimation To Hypoxia Increases Survival Time Of Zebrafish, Danio Rerio, During Lethal Hypoxia, Bernard B. Rees, F Sudradjat, J W. Love

Biological Sciences Faculty Publications

Survivorship of zebrafish, Danio rerio, was measured during lethal hypoxic stress after pretreatment in water at either ambient oxygen or at a lowered, but nonlethal, level of oxygen. Acclimation to nonlethal hypoxia (pO2 @ 15 Torr; ca. 10% air-saturation) for 48 hr significantly extended survival time during more severe hypoxia (pO2 @ 8 Torr; ca. 5% air-saturation) compared to survival of individuals with no prior hypoxic exposure. The magnitude of the acclimation effect depended upon the sex of the fish: hypoxia pretreatment increased the survival times of males by a factor of approximately 9 and that of females by a …

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Identification Of A Defensin From The Hemolymph Of The American Dog Tick, Dermacentor Variabilis, Robert Johns, Daniel E. Sonenshine, Wayne L. Hynes Jan 2001

Identification Of A Defensin From The Hemolymph Of The American Dog Tick, Dermacentor Variabilis, Robert Johns, Daniel E. Sonenshine, Wayne L. Hynes

Biological Sciences Faculty Publications

Hemolymph from partially fed virgin Dermacentor variabilis females was collected following Borrelia burgdorferi challenge and assayed for antimicrobial activity against Bacillus subtilis and B. burgdorferi. A small inducible cationic peptide was identified by SDS-PAGE in the hemolymph of these ticks as early as 1h post challenge. Following purification by a three-step procedure involving sequential SepPak elution, reversed phase high performance liquid chromatography (RP-HPLC) and gel electrophoresis, the yield of the active peptide was approximately 0.1% of the total protein in the hemolymph plasma. The molecular weight, 4.2kDa, was determined by MALDI-TOF mass spectrometry. N-terminal sequencing by the Edman degradation …

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Tick Immunity To Microbial Infections: Control Of Representative Bacteria In The Hard Tick Dermacentor Variabilis (Acari: Ixodidae), Robert Johns, Shane Ceraul, Daniel E. Sonenshine, Wayne L. Hynes Jan 2001

Tick Immunity To Microbial Infections: Control Of Representative Bacteria In The Hard Tick Dermacentor Variabilis (Acari: Ixodidae), Robert Johns, Shane Ceraul, Daniel E. Sonenshine, Wayne L. Hynes

Biological Sciences Faculty Publications

No abstract provided.

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Contrasts In Tick Innate Immune Responses To Borrelia Burgdorferi Challenge: Immuno-Tolerance In Ixodes Scapularis Versus Immunocompetence In Dermacentor Variabilis (Acari: Ixodidae)., Robert Johns, Jun Ohnishi, Anne Broadwater, Daniel E. Sonenshine, Aravinda M. Desilva, Wayne L. Hynes Jan 2001

Contrasts In Tick Innate Immune Responses To Borrelia Burgdorferi Challenge: Immuno-Tolerance In Ixodes Scapularis Versus Immunocompetence In Dermacentor Variabilis (Acari: Ixodidae)., Robert Johns, Jun Ohnishi, Anne Broadwater, Daniel E. Sonenshine, Aravinda M. Desilva, Wayne L. Hynes

Biological Sciences Faculty Publications

The blacklegged tick, Ixodes scapularis Say, transmits the Lyme disease spirochete (Borrelia burgdorferi), whereas the American dog tick, Dermacentor variabilis (Say), is unable to transmit the bacterium. We compared the innate immune response of these ticks against spirochetes directly inoculated into the hemocoel cavity of ticks. In I. scapularis, some Borrelia were found associated with hemocytes, while numerous other spiral-shaped, intact bacteria remained free in the hemolymph. In contrast, in D. variabilis only remnants of the bacteria were evident in the hemolymph, indicating lysis; intact spirochetes were rare. Spirochetes were observed bound to or within the organs …

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Hemin-Binding Surface Protein From Bartonella Quintana, James A. Carroll, Sherry A. Coleman, Laura S. Smitherman, Michael F. Minnick Dec 2000

Hemin-Binding Surface Protein From Bartonella Quintana, James A. Carroll, Sherry A. Coleman, Laura S. Smitherman, Michael F. Minnick

Biological Sciences Faculty Publications

Bartonella quintana, the agent of trench fever and a cause of endocarditis and bacillary angiomatosis in humans, has the highest reported in vitro hemin requirement for any bacterium. We determined that eight membrane-associated proteins from B. quintana bind hemin and that a similar to 25-kDa protein (HbpA) was the dominant hemin binding protein. Like many outer membrane proteins, HbpA partitions to the detergent phase of a Triton X-114 extract of the cell and is heat modifiable, displaying an apparent molecular mass shift from approximately 25 to 30 kDa when solubilized at 100 degreesC. Immunoblots of purified outer and inner membranes …

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Characterization Of Borrelia Burgdorferi Blya And Blyb Proteins: A Prophage-Encoded Holin-Like System, Christopher J. Damman, Christian H. Eggers, D. Scott Samuels Dec 2000

Characterization Of Borrelia Burgdorferi Blya And Blyb Proteins: A Prophage-Encoded Holin-Like System, Christopher J. Damman, Christian H. Eggers, D. Scott Samuels

Biological Sciences Faculty Publications

The conserved cp32 plasmid family of Borrelia burgdorferi was recently shown to be packaged into a bacteriophage particle (C. H. Eggers and D. S. Samuels, J. Bacteriol. 181:7308-7313, 1999), This plasmid encodes BlyA, a 7.4-kDa membrane-interactive protein, and BlyB, an accessory protein, which were previously proposed to comprise a hemolysis system. Our genetic and biochemical evidence suggests that this hypothesis is incorrect and that BlyA and BlyB function instead as a prophage-encoded holin or holin-like system for this newly described bacteriophage, An Escherichia coli mutant containing the blyAB locus that was defective for the normally cryptic host hemolysin SheA was …

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Long-Toed Salamanders In Harvested And Intact Douglas-Fir Forests Of Western Montana, George P. Naughton, Colin B. Henderson, Kerry R. Foresman, Rex L. Mcgraw Ii Dec 2000

Long-Toed Salamanders In Harvested And Intact Douglas-Fir Forests Of Western Montana, George P. Naughton, Colin B. Henderson, Kerry R. Foresman, Rex L. Mcgraw Ii

Biological Sciences Faculty Publications

There is little known about how timber harvest practices have affected terrestrial amphibians in the northern Rocky Mountains. Especially lacking is information on the effects of revised harvest methods that fall within the framework of environmental or New Forestry. We estimated the relative abundance of a common forest amphibian, the long-toed salamander (Ambystoma macrodactylum) captured in pitfall arrays on intact, environmentally harvested, and overstory-removal harvested sites in mixed-conifer forests of western Montana. Pitfall data from 1994 through 1996 showed that previously logged sites contained significantly fewer long-toed salamanders regardless of harvest method used. The number of salamanders captured …

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Sensitivity Of Species Habitat-Relationship Model Performance To Factors Of Scale, J. W. Karl, P. J. Heglund, E. O. Garton, J. M. Scott, N. M. Wright, Richard L. Hutto Dec 2000

Sensitivity Of Species Habitat-Relationship Model Performance To Factors Of Scale, J. W. Karl, P. J. Heglund, E. O. Garton, J. M. Scott, N. M. Wright, Richard L. Hutto

Biological Sciences Faculty Publications

Researchers have come to different conclusions about the usefulness of habitat-relationship models for predicting species presence or absence. This difference frequently stems from a failure to recognize the effects of spatial scales at which the models are applied. We examined the effects of model complexity, spatial data resolution, and scale of application on the performance of bird habitat relationship (BHR) models on the Craig Mountain Wildlife Management Area and on the Idaho portion of the U.S. Forest Service's Northern Region. We constructed and tested BHR models for 60 bird species detected on the study areas. The models varied by three …

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Monitoring Bacterial Transport By Stable Isotope Enrichment Of Cells, William Holben, Peggy H. Ostrom Nov 2000

Monitoring Bacterial Transport By Stable Isotope Enrichment Of Cells, William Holben, Peggy H. Ostrom

Biological Sciences Faculty Publications

Understanding the transport and behavior of bacteria in the environment has broad implications in diverse areas, ranging from agriculture to groundwater quality, risk assessment, and bioremediation. The ability to reliably track and enumerate specific bacterial populations in the context of native communities and environments is key to developing this understanding. We report a novel bacterial tracking approach, based on altering the stable carbon isotope value (delta C-13) Of bacterial cells, which provides specific and sensitive detection and quantification of those cells in environmental samples. This approach was applied to the study of bacterial transport in saturated porous media. The transport …

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Facilitation May Buffer Competitive Effects: Indirect And Diffuse Interactions Among Salt Marsh Plants, Ragan M. Callaway, Steven C. Pennings Oct 2000

Facilitation May Buffer Competitive Effects: Indirect And Diffuse Interactions Among Salt Marsh Plants, Ragan M. Callaway, Steven C. Pennings

Biological Sciences Faculty Publications

Direct interactions among plant species may be highly modified by indirect or diffuse effects within a multispecies community. We investigated the direct and diffuse effects of two salt marsh perennials, Monanthechloe littoralis and Arthrocnemum subterminale, on winter annuals and the perennial herb Limonium californicum in a salt marsh in central California. In permanent plots, Monanthechloe had expanded substantially in the upper marsh over the past 13 yr, while Arthrocnemum and all annual species had decreased. These dynamics suggest that Monanthechloe may directly outcompete most other species in the upper marsh. In contrast, Arthrocnemum is known to facilitate some annual species. …

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Tid1/Rdh54 Promotes Colocalization Of Rad51 And Dmc1 During Meiotic Recombination, Stephen L. Gasior Sep 2000

Tid1/Rdh54 Promotes Colocalization Of Rad51 And Dmc1 During Meiotic Recombination, Stephen L. Gasior

Biological Sciences Faculty Publications

Two RecA homologs, Rad51 and Dmc1, assemble as cytologically visible complexes (foci) at the same sites on meiotic chromosomes. Time course analysis confirms that co-foci appear and disappear as the single predominant form. A large fraction of co-foci are eliminated in a red1 mutant, which is expected as a characteristic of the interhomolog-specific recombination pathway. Previous studies suggested that normal Dmc1 loading depends on Rad51. We show here that a mutation in TID1/RDH54, encoding a RAD54 homolog, reduces Rad51-Dmc1 colocalization relative to WT. A rad54 mutation, in contrast, has relatively little effect on RecA homolog foci except when strains also …

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Regional Variation In Recruitment Of Hemlock Seedlings And Saplings In The Upper Great Lakes, Usa, Thomas P. Rooney, Ronald J. Mccormick, Stephen L. Solheim, Donald M. Waller Aug 2000

Regional Variation In Recruitment Of Hemlock Seedlings And Saplings In The Upper Great Lakes, Usa, Thomas P. Rooney, Ronald J. Mccormick, Stephen L. Solheim, Donald M. Waller

Biological Sciences Faculty Publications

Mature eastern hemlock–northern hardwood forest cover decreased drastically in the upper Midwest following European settlement and has yet to rebound substantially. Previous studies show that stands retaining substantial hemlock canopy coverage have low hemlock seedling and sapling densities. Results from various geographically restricted studies suggest several possible mechanisms that could cause low seedling or sapling density. We examined the relative importance of these proposed mechanisms in the Southern Superior Uplands Section of the Laurentian Forest Province. We surveyed 294- m2 plots in 100 hemlock stands in northern Wisconsin and western upper Michigan to assess how these proposed mechanisms affect the …

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A Biochemical Mechanism For Nonrandom Mutations And Evolution, Barbara E. Wright Jun 2000

A Biochemical Mechanism For Nonrandom Mutations And Evolution, Barbara E. Wright

Biological Sciences Faculty Publications

No abstract provided.

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Outcrossing Rate And Inbreeding Depression In The Perennial Yellow Bush Lupine, Lupinus Arboreus (Fabaceae), Pamela Kittelson, John L. Maron May 2000

Outcrossing Rate And Inbreeding Depression In The Perennial Yellow Bush Lupine, Lupinus Arboreus (Fabaceae), Pamela Kittelson, John L. Maron

Biological Sciences Faculty Publications

Little is known about the breeding systems of perennial Lupinus species. We provide information about the breeding system of the perennial yellow bush lupine, Lupinus arboreus, specifically determining self-compatibility, outcrossing rate, and level of inbreeding depression. Flowers are self-compatible, but autonomous self-fertilization rarely occurs; thus selfed seed are a product of facilitated selfing. Based on four isozyme loci from 34 maternal progeny arrays of seeds we estimated an outcrossing rate of 0.78. However, when we accounted for differential maturation of selfed seeds, the outcrossing rate at fertilization was lower, ∼0.64. Fitness and inbreeding depression of 11 selfed and outcrossed families …

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The Impacts Of A Nonindigenous Marine Predator In A California Bay, Edwin D. Grosholz, Gregory M. Ruiz, Cheryl A. Dean, Kim A. Shirley, John L. Maron, Peter G. Connors May 2000

The Impacts Of A Nonindigenous Marine Predator In A California Bay, Edwin D. Grosholz, Gregory M. Ruiz, Cheryl A. Dean, Kim A. Shirley, John L. Maron, Peter G. Connors

Biological Sciences Faculty Publications

Coastal marine ecosystems worldwide are being altered rapidly by the invasion of nonindigenous species. Unlike terrestrial and freshwater systems, the impacts of an invading species have never been quantified on multiple trophic levels for a marine food web. We measured the impact of the nonindigenous green crab, Carcinus maenas, on a coastal marine food web in central California and found that this predator exerted strong “top-down” control, significantly reducing the abundances of several of the 20 invertebrate species monitored over a 9-yr period. Densities of native clams, Nutricola tantilla and Nutricola confusa, and native shore crabs, Hemigrapsus oregonensis, showed 5-fold …

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Integrating Development With Evolution: A Case Study With Beetle Horns, Douglas J. Emlen May 2000

Integrating Development With Evolution: A Case Study With Beetle Horns, Douglas J. Emlen

Biological Sciences Faculty Publications

No abstract provided.

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Disruption Of The Borrelia Burgdorferi Gac Gene, Encoding The Naturally Synthesized Gyra C-Terminal Domain, Scott W. Knight, Betsy J. Kimmel, Christian H. Eggers, D. Scott Samuels Apr 2000

Disruption Of The Borrelia Burgdorferi Gac Gene, Encoding The Naturally Synthesized Gyra C-Terminal Domain, Scott W. Knight, Betsy J. Kimmel, Christian H. Eggers, D. Scott Samuels

Biological Sciences Faculty Publications

The C-terminal domain of the A subunit of DNA gyrase, which we term Gac, is naturally synthesized in Borrelia burgdorferi as an abundant DNA-binding protein. Full-length GyrA, which includes the C-terminal domain, is also synthesized by the spirochete and functions as a subunit of DNA gyrase, We have disrupted synthesis of Gac as an independent protein and demonstrated that it is not essential for growth in a coumarin-resistant background. We detected no alterations in DNA maintenance, condensation, or topology In B. burgdorferi lacking this small DNA-binding protein.

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A Bacteriophage-Like Particle From Bartonella Bacilliformis, Kent D. Barbian, Michael F. Minnick Mar 2000

A Bacteriophage-Like Particle From Bartonella Bacilliformis, Kent D. Barbian, Michael F. Minnick

Biological Sciences Faculty Publications

Bartonella bacilliformis and Bartonella henselae, the respective agents of Oroya fever and cat-scratch disease in humans, are known to produce bacteriophage-like particles (BLPs) that package 14 kbp segments of the host chromosome. Data from this study suggest that other Bartonella species including Bartonella quintana, Bartonella doshiae and Bartonella grahamii also contain similar BLPs, as evidenced by the presence of a 14 kbp extrachromosomal DNA element in their genomes, whereas Bartonella elizabethae and Bartonella clarridgeiae do not. A purification scheme utilizing chloroform, DNase I and centrifugation was devised to isolate BLPs from B. bacilliformis. Intact BLPs were observed by transmission electron …

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Periphyton Production On Wood And Sediment: Substratum-Specific Response To Laboratory And Whole-Lake Nutrient Manipulations, Yvonne Vadeboncoeur, David M. Lodge Mar 2000

Periphyton Production On Wood And Sediment: Substratum-Specific Response To Laboratory And Whole-Lake Nutrient Manipulations, Yvonne Vadeboncoeur, David M. Lodge

Biological Sciences Faculty Publications

Substratum heterogeneity is a large source of variability in periphyton production, but the influence of substratum on periphyton response to experimental manipulations is rarely measured. Using laboratory and whole-lake experiments, we compared area-specific primary production of periphyton on wood (epixylon) and sediment (epipelon), and tested whether periphyton on the 2 substrata responded differently to water-column fertilization. In the laboratory, natural periphyton assemblages on wood or sediment were exposed to 1 of 6 treatments in a fully factorial (light [250, 70, or 10 μmol m−2 s−1] × nutrient [control or + N and P]) experiment. We measured 14 …

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The Advantages Of Clonal Integration Under Different Ecological Conditions: A Community-Wide Test, Steven C. Pennings, Ragan M. Callaway Mar 2000

The Advantages Of Clonal Integration Under Different Ecological Conditions: A Community-Wide Test, Steven C. Pennings, Ragan M. Callaway

Biological Sciences Faculty Publications

The "connectedness" of clonal plants has been shown to promote survival and growth in a variety of single-species, single-factor studies, but experiments comparing the relative advantages of clonality across multiple habitats and species are rare, raising the concern that generalizations about the benefits of clonality might be biased by the particular species or habitat studied. We studied the importance of clonal integration in southeastern USA salt marsh plants, using all six of the common clonal species in the community, by following the success of intact and severed clonal fragments invading three habitat treatments. Clonal integration was most important for growth …

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Genetic Variation Among Endosymbionts Of Widely Distributed Vestimentiferan Tubeworms, Carol A. Di Meo, Ami E. Wilbur, William E. Holben, Robert A. Feldman, Robert C. Vrijenhoek, S. Craig Cary Feb 2000

Genetic Variation Among Endosymbionts Of Widely Distributed Vestimentiferan Tubeworms, Carol A. Di Meo, Ami E. Wilbur, William E. Holben, Robert A. Feldman, Robert C. Vrijenhoek, S. Craig Cary

Biological Sciences Faculty Publications

Vestimentiferan tubeworms thriving in sulfidic deep-sea hydrothermal vents and cold seeps are constrained by their nutritional reliance on chemoautotrophic endosymbionts. In a recent phylogenetic study using 16S ribosomal DNA, we found that endosymbionts from vent and seep habitats form two distinct clades,vith little variation within each clade. In the present study, we used two different approaches to assess the genetic variation among biogeographically distinct vestimentiferan symbionts, DNA sequences were obtained for the noncoding, internal transcribed spacer (ITS) regions of the rRNA operons of symbionts associated with six different genera of vestimentiferan tubeworms. ITS sequences from endosymbionts of host genera collected …

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Stress And Developmental Stability: Vegetation Removal Causes Increased Fluctuating Asymmetry In Shrews, Alexander V. Badyaev, Kerry R. Foresman, Miguel V. Fernandes Feb 2000

Stress And Developmental Stability: Vegetation Removal Causes Increased Fluctuating Asymmetry In Shrews, Alexander V. Badyaev, Kerry R. Foresman, Miguel V. Fernandes

Biological Sciences Faculty Publications

Environmental stress can increase phenotypic variation in populations by affecting developmental stability of individuals. While such increase in variation results from individual differences in ability to buffer stress, groups of individuals and different traits may have different sensitivity to stressful conditions. For example, the sex that is under stronger directional selection for faster growth may be more sensitive to stressful conditions during development. On an individual level, stress-induced variation in a trait may be related to the strength of stabilizing selection that acts on the trait. We experimentally examined sensitivity of mandibular development to stress in a free-living population of …

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Structure Of A Rat Α1-Macroglobulin Receptor-Binding Domain Dimer, Tsan Xiao, Dianne L. Decamp, Stephen R. Sprang Jan 2000

Structure Of A Rat Α1-Macroglobulin Receptor-Binding Domain Dimer, Tsan Xiao, Dianne L. Decamp, Stephen R. Sprang

Biological Sciences Faculty Publications

α-Macroglobulin inhibits a broad spectrum of proteinases by forming macromolecular cages inside which proteinases are cross-linked and trapped. Upon formation of a complex with proteinase, α-macroglobulin undergoes a large conformational change that results in the exposure of its receptor-binding domain (RBD). Engagement of this domain by α-macroglobulin receptor permits clearance of the α-macroglobulin: proteinase complex from circulation. The crystal structure of rat α1-macroglobulin RBD has been determined at 2.3 Å resolution. The RBD is composed of a nine-stranded β-sandwich and a single α-helix that has been implicated as part of the receptor binding site and that lies on …

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Evidence For Microbial Fe(Iii) Reduction In Anoxic, Mining-Impacted Lake Sediments (Lake Coeur D’Alene, Idaho), David E. Cummings, Anthony W. March, Benjamin Bostick, Stefan Spring, Frank Caccavo Jr., Scott Fendorf, Frank Rosenzweig Jan 2000

Evidence For Microbial Fe(Iii) Reduction In Anoxic, Mining-Impacted Lake Sediments (Lake Coeur D’Alene, Idaho), David E. Cummings, Anthony W. March, Benjamin Bostick, Stefan Spring, Frank Caccavo Jr., Scott Fendorf, Frank Rosenzweig

Biological Sciences Faculty Publications

Mining-impacted sediments of Lake Coeur d'Alene, Idaho, contain more than 10% metals on a dry weight basis, approximately 80% of which is iron. Since iron (hydr)oxides adsorb toxic, ore-associated elements, such as arsenic, iron (hydr)oxide reduction may in part control the mobility and bioavailability of these elements. Geochemical and microbiological data were collected to examine the ecological role of dissimilatory Fe(III)-reducing bacteria in this habitat. The concentration of mild-acid-extractable Fe(II) increased with sediment depth up to 50 g kg−1, suggesting that iron reduction has occurred recently. The maximum concentrations of dissolved Fe(II) in interstitial water (41 mg liter …

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Molecular Evidence For A New Bacteriophage Of Borrelia Burgdorferi, Christian H. Eggers, D. Scott Samuels Dec 1999

Molecular Evidence For A New Bacteriophage Of Borrelia Burgdorferi, Christian H. Eggers, D. Scott Samuels

Biological Sciences Faculty Publications

We have recovered a DNase-protected, chloroform-resistant molecule of DNA from the cell-free supernatant of a Borrelia burgdorferi culture. The DNA is a 32-kb double-stranded linear molecule that is derived from the 32-kb circular plasmids (cp32s) of the B. burgdorferi genome. Electron microscopy of samples from which the 32-kb DNA molecule was purified revealed bacteriophage particles. The bacteriophage has a polyhedral head with a diameter of 55 nm and appears to have a simple 100-nm-long tail. The phage is produced constitutively at low levels from growing cultures of some B. burgdorferi strains and is inducible to higher levels with 10 mu …

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Three-Dimensional Structure Of A Complex Between The Death Domains Of Pelle And Tube, Tsan Xiao, Par Towb, Steven A. Wasserman, Stephen R. Sprang Nov 1999

Three-Dimensional Structure Of A Complex Between The Death Domains Of Pelle And Tube, Tsan Xiao, Par Towb, Steven A. Wasserman, Stephen R. Sprang

Biological Sciences Faculty Publications

The interaction of the serine/threonine kinase Pelle and adaptor protein Tube through their N-terminal death domains leads to the nuclear translocation of the transcription factor Dorsal and activation of zygotic patterning genes during Drosophila embryogenesis. Crystal structure of the Pelle and Tube death domain heterodimer reveals that the two death domains adopt a six-helix bundle fold and are arranged in an open-ended linear array with plastic interfaces mediating their interactions. The Tube death domain has an insertion between helices 2 and 3, and a C-terminal tail making significant and indispensable contacts in the heterodimer. In vivo assays of Pelle and …

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