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Full-Text Articles in Biology

Spatiotemporal Variation Of Avian Populations Within Geographically Isolated Freshwater Marshes, Brian Rodenbeck Jan 2007

Spatiotemporal Variation Of Avian Populations Within Geographically Isolated Freshwater Marshes, Brian Rodenbeck

Electronic Theses and Dissertations

Metacommunity connectivity, i.e., multi-species dispersal events, is vital to metapopulation persistence in patchy landscapes. Assessments of metacommunity connectivity are not trivial. However, a relationship between trophic rank and the species-area relationship has been found in previous studies, allowing for the use of the predator species-area relationship to act as a surrogate measure of actual metacommunity connectivity of prey species in some systems. For this study, avian species were selected as they are generalist top predators within the study system. Predator species richness within geographically isolated freshwater marshes is influenced by a number of factors. I explore the relative roles of …


Tree Calls Of Three Treefrogs (Hyla Femoralis, H. Gratiosa, And H. Squirella): Analysis Of Environmental, Behavioral, And Acoustic Characteristics, Kristine Schad Jan 2007

Tree Calls Of Three Treefrogs (Hyla Femoralis, H. Gratiosa, And H. Squirella): Analysis Of Environmental, Behavioral, And Acoustic Characteristics, Kristine Schad

Electronic Theses and Dissertations

Male frogs typically call near water at dusk to attract females for breeding. During the breeding season, male treefrogs also emit diurnal "tree calls" or "rain calls" from the tops of trees. Very little is known about tree calls, although many treefrogs use them. Tree calls may be used to attract females, deter males or be triggered by weather conditions favorable for breeding: high temperature and relative humidity, and a drop in barometric pressure. As dusk approaches, male treefrogs continue tree calls from lower in the trees, and if conditions are favorable, jump to the ground and travel to a …


Characterization Of Pigment Cell Specific Genes In The Sea Urchin Embryo (Strongylocentrotus Purpuratus), Tricia Stephens Jan 2007

Characterization Of Pigment Cell Specific Genes In The Sea Urchin Embryo (Strongylocentrotus Purpuratus), Tricia Stephens

Electronic Theses and Dissertations

In sea urchin development, cell fate specification appears by the 60-cell stage embryo when several embryonic territories are recognized: the small micromeres, the large micromeres which will generate primary mesenchyme cells, the vegetal2 layer that will give rise to pigment cells, immunocytes, and muscle cells, the vegetal1 layer, as well as the oral and aboral ectoderm. A Delta-Notch signaling event is required for the differential specification of mesodermal cells that will give rise to secondary mesenchyme cells (SMCs). SMCs produce four cell types: pigment cells, blastocoelar cells, circumesophageal muscle cells, and coelomic pouch cells. Pigment cells are the first to …


Responses Of Small Rodents To Restoration And Management Techniques Of Florida Scrub At Cape Canaveral Air Force Station, Florid, Alexis Suazo Jan 2007

Responses Of Small Rodents To Restoration And Management Techniques Of Florida Scrub At Cape Canaveral Air Force Station, Florid, Alexis Suazo

Electronic Theses and Dissertations

Proper habitat management is essential for the survival and reproduction of species, especially those listed under state or federal laws as endangered, threatened or of special concern, and those with small local populations. Land managers use a combination of mechanical cutting and prescribed burning to manage and restore degraded scrub habitat in east central Florida. This approach improves habitat for the endangered Florida scrub-jay (Aphelocoma coerulescens), but little is known about its effects on other taxa, especially the threatened southeastern beach mouse (Peromyscus polionotus niveiventris). This single species approach may not be beneficial to other taxa, and mechanical cutting and …


Stabel Isotope Turnover Rates And Diet-Tissue Discrimination In The Skin Of West Indian Manatees: Implcations For Evaluating Their Feeding Ecology And Habitat Use, Christy Alves Jan 2007

Stabel Isotope Turnover Rates And Diet-Tissue Discrimination In The Skin Of West Indian Manatees: Implcations For Evaluating Their Feeding Ecology And Habitat Use, Christy Alves

Electronic Theses and Dissertations

The West Indian manatee (Trichechus manatus) is an herbivorous marine mammal that occupies freshwater, estuarine, and marine habitats. Despite being considered endangered, relatively little is known about the feeding ecology of either of the two recognized subspecies, the Florida manatee (T.m. latirostris) and Caribbean or Antillean manatee (T.m. manatus). A better understanding of their respective feeding preferences and habitat use is essential to establish criteria on which conservation plans can be based. The present study expands on previous work on manatee feeding ecology by both assessing the application of stable isotope analysis to manatee tissue and providing critical baseline parameters …


Individual Identification Of Polar Bears By Whisker Spot Patterns, Carlos Anderson Jan 2007

Individual Identification Of Polar Bears By Whisker Spot Patterns, Carlos Anderson

Electronic Theses and Dissertations

Many types of ecological studies require identification of individual animals. I developed and evaluated an automated identification system for polar bears (Ursus maritimus) based on their whisker spot patterns. First, I measured the reliability of using whisker spot patterns for identification from polar bear photographs taken in western Hudson Bay. This analysis involved estimating the complexity of each whisker spot pattern in terms of its information content. I found that 98% of patterns contained enough information to be reliable, and this result varied little among three different observers. Based on these results, I implemented a computer-aided identification system for polar …


Restoration Of Intertidal Oyster Reefs Affected By Intense Recreational Boating Activity In Mosquito Lagoon, Florida, Andrea Barber Jan 2007

Restoration Of Intertidal Oyster Reefs Affected By Intense Recreational Boating Activity In Mosquito Lagoon, Florida, Andrea Barber

Electronic Theses and Dissertations

In recent years, intertidal reefs of Crassostrea virginica (eastern oyster) along central Florida's east coast have suffered extensive losses due to wakes from recreational boats. These wakes have caused extensive shell movement and sediment resuspension which results in large piles of disarticulated shells along the seaward edges of reefs. Dead margins extend up to one meter above mean high water. The creation and enforcement of "no wake" zones in the area are unlikely. Thus, there is an urgent need for an alternative restoration strategy before these oyster reefs decline any further. The goal of this project was to develop a …


Effects Of Isolation On Metapopulation Dynamics In Small-World Networks, Alaina Brooke Bernard Jan 2007

Effects Of Isolation On Metapopulation Dynamics In Small-World Networks, Alaina Brooke Bernard

Electronic Theses and Dissertations

Simulation models are valuable for making predictions that may be tested in natural systems and for understanding observed patterns. The simulation model developed for this thesis evaluates the effects of spatial network architecture, including organism dispersal patterns and isolation of habitats, on metapopulations. Two fields were merged throughout this project: metapopulation biology and small-world network theory. Small-world networks are characterized in their extremes as scale-free or single-scale. These models potentially simulate the networks of habitats and corridors in which metapopulations operate. Small-world network theory has been used to describe systems as diverse as rivers, the world-wide-web, and protein interactions, but …


Modeling And Partitioning The Nucleotide Evolutionary Process For Phylogenetic And Comparative Genomic Inference, Todd Castoe Jan 2007

Modeling And Partitioning The Nucleotide Evolutionary Process For Phylogenetic And Comparative Genomic Inference, Todd Castoe

Electronic Theses and Dissertations

The transformation of genomic data into functionally relevant information about the composition of biological systems hinges critically on the field of computational genome biology, at the core of which lies comparative genomics. The aim of comparative genomics is to extract meaningful functional information from the differences and similarities observed across genomes of different organisms. We develop and test a novel framework for applying complex models of nucleotide evolution to solve phylogenetic and comparative genomic problems, and demonstrate that these techniques are crucial for accurate comparative evolutionary inferences. Additionally, we conduct an exploratory study using vertebrate mitochondrial genomes as a model …


Trophic Status Of A Small Mammal Assemblage On Cape Canaveral Air Force Station With An Emphasis On Peromyscus Polionotus Niveiv, Megan Keserauskis Jan 2007

Trophic Status Of A Small Mammal Assemblage On Cape Canaveral Air Force Station With An Emphasis On Peromyscus Polionotus Niveiv, Megan Keserauskis

Electronic Theses and Dissertations

Successful translocation of a listed species into an area of previous occupation requires knowledge of the habitat needs. The presence of the necessary food items is critical to the successful establishment of a new population; this information is unknown for Peromyscus polionotus niveiventris, the southeastern beach mouse, a threatened subspecies on the east coast of Florida. I used fecal and stable isotope analysis to determine the diet of this subspecies at Cape Canaveral Air Force Station, Brevard County, Florida, between the autumn of 2003 and the spring of 2005. Six trapping grids were established, three in the dune/swale and three …


Seasonal And Diel Patterns Of Manatee Habitat Use, Monica Ann Ross Jan 2007

Seasonal And Diel Patterns Of Manatee Habitat Use, Monica Ann Ross

Electronic Theses and Dissertations

State and Federal agencies have created sanctuaries and speed zones to help reduce manatee mortality while incorporating the recreational and commercial resource needs of these same habitats for humans. Specific habitat resources are considered necessary to increase manatee survivorship. We have only recently begun to address how manatees use some of these resources based on physiological or reproductive strategies. In this study, I quantified patterns of habitat use during seasonal and diel periods for different sex and reproductive manatee classes using data from a radio-telemetry study conducted by the Florida Fish and Wildlife Conservation Commission during 1991-1996. I used five …


Genetic And Phenotypic Evolution In The Ornate Chorus Frog (Pseudacris Ornata): Testing The Relative Roles Of Natural Selection,, Jacob Degner Jan 2007

Genetic And Phenotypic Evolution In The Ornate Chorus Frog (Pseudacris Ornata): Testing The Relative Roles Of Natural Selection,, Jacob Degner

Electronic Theses and Dissertations

Understanding how migration, genetic drift, and natural selection interact to maintain the genetic and phenotypic variation we observe in natural populations is a central goal of population genetics. Amphibians provide excellent model organisms for investigating the interplay between these evolutionary forces because amphibians are generally characterized by limited dispersal abilities, high philopatry, and are obligately associated with the areas around suitable habitats (e.g. breeding ponds). Thus, on relatively small geographic scales, the relative effects of all of these evolutionary forces can be studied together. Here, we study the interaction of migration, genetic drift, natural selection, and historical process in the …


Sex-Biased Parasitism And The Reproductive Costs Of Parasites In A Social African Ground Squirrel, Melissa Ann Hillegass Jan 2007

Sex-Biased Parasitism And The Reproductive Costs Of Parasites In A Social African Ground Squirrel, Melissa Ann Hillegass

Electronic Theses and Dissertations

Vertebrate males frequently carry higher numbers of parasites than females. This bias in parasite loads could be a consequence of sexual selection. Grouping species are also assumed to be afflicted with larger numbers of parasites than solitary animals and associated costs of this parasitism could vary with group size or structure. I examined sex-biased parasitism and the influence of group size on parasite loads in Cape ground squirrels (Xerus inauris), a highly social species that occurs in the arid regions of southern Africa. Males carried three times as many ectoparasites as females, but females harbored nearly three times more endoparasites …


Demographic Consequences Of Managing For Florida Scrub-Jays (Aphelocoma Coerulescens) On An Isolated Preserve., Casey Lyon Jan 2007

Demographic Consequences Of Managing For Florida Scrub-Jays (Aphelocoma Coerulescens) On An Isolated Preserve., Casey Lyon

Electronic Theses and Dissertations

Many species naturally occupy discrete habitat patches within a mosaic of habitats that vary in quality. The Florida scrub-jay (Aphelocoma coerulescens) is endemic to Florida scrub, a habitat that is naturally patchy and greatly reduced in area over recent decades owing to development and urbanization. Because of this habitat loss, future management of Florida scrub-jays will focus on smaller, fragmented tracts of land. My study examines such a tract, Lyonia Preserve, southwest Volusia County, FL. This preserve was unoccupied by scrub-jays prior to habitat restoration. The preserve is now frequently managed exclusively for scrub-jays as a habitat island surrounded by …


Does Habitat Affect Clonal Demography? An Experiment With Polygonella Myriophylla In Roadside And Florida Scrub, Kristina Dianne Horn Jan 2007

Does Habitat Affect Clonal Demography? An Experiment With Polygonella Myriophylla In Roadside And Florida Scrub, Kristina Dianne Horn

Electronic Theses and Dissertations

Polygonella myriophylla (Polygonaceae) is a clonal shrub listed as endangered and narrowly endemic to pyrogenic scrub ecosystems in central Florida. It is almost restricted to gaps within the matrix of shrubs in the scrub but also occurs along adjacent road-side habitats. I hypothesize that persistent disturbed microhabitats and more dynamic sand accretion in roadsides will increase rooting probabilities compared to more stable scrub habitats, affecting survival, growth and reproduction. In April 2004- March 2006, I compared plant (genet) and basal branch (ramet) performance between experimentally manipulated plants in native scrub and roadside habitats at two locations within the Lake Wales …


Life History And Reproductive Biology Of Clitoria Fragrans Relative To Fire History On The Avon Park Air Force Range, Michelle Nicole Lewis Jan 2007

Life History And Reproductive Biology Of Clitoria Fragrans Relative To Fire History On The Avon Park Air Force Range, Michelle Nicole Lewis

Electronic Theses and Dissertations

The southeastern coastal plain of the United States is a center of endemism for plants in temperate North America and second only to California among the states. In the southeast, Florida has the largest number of these endemic plants. The largest number of these Florida endemics can be found in the fire maintained scrub and sandhill communities located on sandy ridges in Central Florida. One such endemic is Clitoria fragrans, a rare perennial herb. C. fragrans reproduces via a mixed mating system. It produces both open, chasmogamous flowers and closed, selfed, cleistogamous flowers. Little else is known about its biology. …