Biology Commons^™

Terrestrial Macrofungi Of Illinois Old-Growth Prairie Groves, Scott Meiners, Andrew Methven, Vincent Hustad

Faculty Research & Creative Activity

ABSTRACT.—Macrofungi from two old-growth prairie grove remnants in the Midwestern United States (Brownfield and Trelease Woods. Champaign Co., IL ) were surveyed over two summer and fall fruiting periods. Communities of Ascomycetes, Basidiomycetes and Myxomycètes were sampled and compared using multivariate statistical analyses. Standard estimations of species richness were calculated for comparison with other studies of fungal diversity. Environmental factors (rainfall, humidity, air temperature and soil temperature at 10 cm depth) as well as leaf litter composition, and woody plant communities were surveyed to assess their impact on fungal communities. Fungal community structure was found to differ significandy both between …

Succession, Scott Meiners, Steward Pickett

Faculty Research & Creative Activity

Succession in a strict sense refers to the recovery and revegetation of an area following a disturbance such as the cessation of agriculture, the retreat of a glacier, or an intense forest fi re. Succession is a special case of vegetation dynamics, although many early ecologists referred to all vegetation change as succession. Succession includes a series of compositional and structural changes, often in a directional manner. The common occurrence of natural disturbances coupled with the extent of human activity on the planet makes succession one of the most ubiquitous ecological processes. Because invasion is a crucial feature of succession, …

Social Dimensions Of Lake Ecology: Stakeholder Perception Surveys Used To Design Effective Lake Management Plans, Laurie Nannini

Masters Theses

Lake conservation management plans have exhibited varying levels of success through out Illinois. Recent research, in eutrophic lakes shows that pollution at any level stabilizes when stakeholder cooperation is enhanced by high conformist tendency and social concern. Involving stakeholders in preliminary stages of lake management plans creates more legitimacy and connectedness with the local government as well as stakeholder involvement with management plans. Public opinion data also allows policy makers to sustainably involve stakeholders in management plans. Members of the Illinois Lake Management Association were surveyed on their perceived threats to lakes, preferences on lake facilities and activities. Responses were …

Is Anthropogenic Habitat Change The Driving Force Of Rapid Evolution Of Southeastern U.S. Coastal Deer Populations?, Nicole L. Storm

Masters Theses

Many factors, such as genetics, food availability and the exact food species, can affect the growth rate and asymptotic size of animals. Since the I 960's, the coastal areas and islands in Georgia, North Carolina, and South Carolina have become vacation destinations with large and lavish resort communities built to accommodate the large number of visitors to areas that were once called home by just a small number of residents. These developments brought with them non-native plants and improved soil quality for both native and non-native plants. During this same time period, the whitetailed deer ( Odocoileus virginianus) native to …

Analysis Of Extinction Of Fibroblast-Specific Gene Expression In Somatic Hepatic Hybrids Using Cdna Microarray Technology, Sushma K. Shrestha

Masters Theses

Extinction of tissue-specific genes in mammalian somatic cell hybrids is a well known epigenetic phenomenon and knowledge of this process is useful in understanding molecular mechanisms underlying tissue specific gene expression. Signaling proteins critical for the activation of transcription including transcription factors, co-activators, and repressors, play a role in the establishment and maintenance of tissue-specific phenotypes. Tissue-specific transcription factors are the key driving force of tissuespecific gene expression. However, mechanisms responsible for gene silencing are largely unknown.

Extinction of liver specific traits in somatic hybrids generated by the fusion of hepatoma and fibroblast cells has been well documented and is …

Interactions Of Diet And Behavior In A Death-Feigning Snake (Heterodon Nasicus), Andrew Michael Durso

Masters Theses

Studies of animal behavior in captivity are limited in their ability to explain the influence of a natural environment on behavioral ecology. Defensive behaviors vary among individual animals, between sexes and with age, as well as with other less well-known factors. The toxin-rich diet of many toad-eating snakes might enable or cause their passive terminal defensive behavior of death-feigning. I videotaped death-feigning behavior in wild Plains Hog-Nosed Snakes (Heterodon nasicus) subjected to standardized harassment. Using stable isotopes, I also described the diet of the same individuals subjected to behavioral analysis (n = 40). Heterodon had broader diets than other snakes …

Estrogen Promotes Neurite Outgrowth In Olfactory Epithelial Explant Cultures Through The Estrogen Receptor, Apryl E. Pooley

Masters Theses

No abstract provided.

A Functional Genomics Approach To Analyze Two Methionine-[Gamma]-Lyase Orthologs In "Ferroplasma Acidarmanus" Using In Vitro Enzyme Assays, Md. A. Wadud Khan

Masters Theses

Functional genomics predicts that ferl genome has two candidate genes for the production of two methionine-y-lyase (MGL) orthologs, which are thought to be pivotal for the production of methanethiol. These orthologs show a high level of protein sequence identity ( ~ 3 5%) and similarity (~60%) when compared to known MGLs. In addition, ClustalW2 alignment of ferl MGL orthologs and other known MG Ls showed a high level of similarity in amino acid residues, which are involved for the stabilization of 3D structure of MGL and in forming active site for the substrates. To confirm the predictive functions of these …

The Evolution Of Leaf Anatomy In Badiera (Polygalaceae), Laura Brauer

Masters Theses

Leaf samples from Polygalaceae: nine species of Badiera, two species of Bredemeyera, three species of Hebecarpa, and two species of Polygala were taken from herbarium specimens for anatomical observations. Several methods of rehydration were compared to a control of fresh material fixed in the field for four species of Badiera. Soaking in concentrated ammonium hydroxide proved to be the best overall means of rehydrating leaves of the genus Badiera and related genera. All leaves were embedded in paraffin for sectioning and cleared in 5% aqueous sodium hydroxide for examining epidermal features. Twelve anatomical characters were mapped onto a molecular phylogeny …

Acute Responses To Estradiol Replacement In The Olfactory System Of Apoe-Deficient And Wild-Type Mice, Britto Nathan, Michael Tonsor, Robert Struble

Faculty Research & Creative Activity

Epidemiological studies suggest that estrogen therapy protects against clinical expression of chronic neurological diseases. These beneficial effects of estrogen therapy are highly modified by apolipoprotein E (apoE) through an unknown mechanism. We examined the short-term effects of estradiol replacement in ovariectomized mice on apoE expression and markers for cell proliferation, reactive gliosis, neuronal maturation, and synaptogenesis in the primary olfactory pathway of wild-type (WT) and apoE knockout (KO) mice. Three days of estradiol replacement increased apoE expression in the olfactory nerve and in the glomerular layer. Estradiol treatment also increased cell proliferation, total cell numbers, number of mature neurons in …

Acute Responses To Estradiol Replacement In The Olfactory System Of Apoe-Deficient And Wild-Type Mice, Britto P. Nathan, Michael Tonsor, Robert G. Struble

Faculty Research & Creative Activity

Epidemiological studies suggest that estrogen therapy protects against clinical expression of chronic neurological diseases. These beneficial effects of estrogen therapy are highly modified by apolipoprotein E (apoE) through an unknown mechanism. We examined the short-term effects of estradiol replacement in ovariectomized mice on apoE expression and markers for cell proliferation, reactive gliosis, neuronal maturation, and synaptogenesis in the primary olfactory pathway of wild-type (WT) and apoE knockout (KO) mice. Three days of estradiol replacement increased apoE expression in the olfactory nerve and in the glomerular layer. Estradiol treatment also increased cell proliferation, total cell numbers, number of mature neurons in …

Relative Allelopathic Potential Of Invasive Plant Species In A Young Disturbed Woodland, Nikki Pisula, Scott J. Meiners

Faculty Research & Creative Activity

Invasive plant species are often more successful within introduced areas when compared to their natural ranges. Allelopathy has been suggested as a potential mechanism for this success because invasive plants frequently establish monocultures and may produce allelochemicals evolutionarily novel to the recipient community. However, species are typically tested in isolation making the relative strength of allelopathy difficult to assess. We conducted laboratory bioassays for 10 co-occurring non-native species to determine the relative strength of their allelopathic potential. These species represented a suite of successful invaders within a young forest and were from a variety of plant life forms: trees, lianas, …

Tissue-Diet Discrimination Factors And Turnover Of Stable Carbon And Nitrogen Isotopes In White-Footed Mice (Peromyscus Leucopus), Rachel L. Demots, James M. Novak, Karen F. Gaines, Aaron J. Gregor, Christopher S. Romanek, Daniel A. Soluk

Faculty Research & Creative Activity

Stable isotope analysis has become an increasingly valuable tool in investigating animal ecology. Here we document the turnover rates for carbon in the liver, muscle, and whole blood tissue, as well as the tissue-diet discrimination values for carbon and nitrogen isotopes in the liver, whole blood, muscle, and hair, of the white-footed mouse (Peromyscus leucopus (Rafinesque, 1818)). A 168-day diet-switching experiment was conducted with a laboratory population of white-footed mice. The δ13C values for all tissues deviated less than 1‰ from those of the diet except for whole blood, which had a slightly higher tissue-diet discrimination factor of 1.8‰. All …

Evaluating The Illinois Stream Valley Segment Model As An Effective Management Tool, Stephen S. Warrner, Robert U. Fischer, Ann M. Holtrop, Leon C. Hinz Jr., James M. Novak

Faculty Research & Creative Activity

Stream habitat assessments are conducted to evaluate biological potential, determine anthropogenic impacts, and guide restoration projects. Utilizing these procedures, managers must first select a representative stream reach, which is typically selected based on several criteria. To develop a consistent and unbiased procedure for choosing sampling locations, the Illinois Department of Natural Resources and the Illinois Natural History Survey have proposed a technique by which watersheds are divided into homogeneous stream segments called valley segments. Valley segments are determined by GIS parameters including surficial geology, predicted flow, slope, and drainage area. To date, no research has been conducted to determine if …

Mechanisms Of Apoptosis In Crustacea: What Conditions Induce Versus Suppress Cell Death?, Michael A. Menze, Grady Fortner, Suman Nag, Steven C. Hand

Faculty Research & Creative Activity

Arthropoda is the largest of all animal phyla and includes about 90% of extant species. Our knowledge about regulation of apoptosis in this phylum is largely based on findings for the fruit fly Drosophila melanogaster. Recent work with crustaceans shows that apoptotic proteins, and presumably mechanisms of cell death regulation, are more diverse in arthropods than appreciated based solely on the excellent work with fruit flies. Crustacean homologs exist for many major proteins in the apoptotic networks of mammals and D. melanogaster, but integration of these proteins into the physiology and pathophysiology of crustaceans is far from complete. Whether apoptosis …

A Sketch-Based Language For Representing Uncertainty In The Locations Of Origin Of Herbarium Specimens, Barry Kronenfeld, Andrew Weeks

Faculty Research and Creative Activity

Uncertainty fields have been suggested as an appropriate model for retrospective georeferencing of herbarium specimens. Previous work has focused only on automated data capture methods, but techniques for manual data specification may be able to harness human spatial cognition skills to quickly interpret complex spatial propositions. This paper develops a formal modeling language by which location uncertainty fields can be derived from manually sketched features. The language consists of low-level specification of critical probability isolines from which a surface can be uniquely derived, and high-level specification of features and predicates from which low-level isolines can be derived. In a case …

Relative Allelopathic Potential Of Invasive Plant Species In A Young Disturbed Woodland, Nikki Pisula, Scott Meiners

Faculty Research & Creative Activity

Invasive plant species are often more successful within introduced areas when compared to their natural ranges. Allelopathy has been suggested as a potential mechanism for this success because invasive plants frequently establish monocultures and may produce allelochemicals evolutionarily novel to the recipient community. However, species are typically tested in isolation making the relative strength of allelopathy difficult to assess. We conducted laboratory bioassays for 10 co-occurring non-native species to determine the relative strength of their allelopathic potential. These species represented a suite of successful invaders within a young forest and were from a variety of plant life forms: trees, lianas, …

Allelopathic Effects Of Goldenrod Species On Turnover In Successional Communities, Nikki Pisula, Scott Meiners

Faculty Research & Creative Activity

While goldenrod species are often found to be allelopathic in laboratory settings, its importance in controlling plant community dynamics has been much more difficult to assess. We designed a study to determine whether allelopathy is related to the success of goldenrods in abandoned agricultural land. To accomplish this, we conducted laboratory bioassays for six co-occurring goldenrod species and compared these results to the cover and impacts of these species in the field. We determined the germination responses of two target species to a gradient of leaf extract concentrations to assess the allelopathic potential of these goldenrods. We also used long-term …

Spatiotemporal Dynamics Of Lianas During 50 Years Of Succession To Temperate Forest, Laura Ladwig, Scott Meiners

Faculty Research & Creative Activity

Although they are important components of forest communities, the general ecology and spatiotemporal patterns of temperate lianas during forest regeneration are largely unknown. The dependence of lianas on other plants for physical support makes them a potentially important driver of community dynamics. We examined 50 years of vegetation data from an old-field succession study to determine the dynamics and community controls on liana expansion within the Piedmont region of New Jersey, USA. Four lianas, Lonicera japonica, Parthenocissus quinquefolia, Toxicodendron radicans, and Vitis spp., occurred in enough abundance for detailed analyses. In general, liana cover peaked during mid-succession (20–30 years post-abandonment) …

Responses Of Bats To Forest Fragmentation In The Mississippi River Alluvial Valley, Arkansas, Usa, Rex E. Medlin Jr., Matthew B. Connior, Karen F. Gaines, Thomas S. Risch

Faculty Research & Creative Activity

Intense conversion of bottomland hardwood forests to rice and soybeans in the Mississippi River Valley of Arkansas has restricted the remaining forest to isolated fragments. Habitat fragmentation has proven to be detrimental to population sustainability of several species, and is the subject of intense study with often species and latitude specific responses. We compared both coarse land area classes and landscape fragmentation metrics from six 30 km × 30 km subsets centered on publicly owned management areas to bat captures obtained from a 2005 population study. Patch density was the strongest predictor of total captures (R 2 = 0.801, p …

Reconstitution Of The Olfactory Epithelium Following Injury In Apoe-Deficient Mice, Britto P. Nathan, Salina Gairhe, Ikemefuna Nwosu, Stephen Clark, Robert G. Struble

Faculty Research & Creative Activity

ApoE, a protein component of lipoproteins, is extensively expressed in the primary olfactory pathway. Because apoE has been shown to play a vital role in nerve repair and remodeling, we hypothesized that apoE expression will increase in the injured olfactory epithelium (OE), and that apoE deficiency in apoE knockout (KO) mice will lead to delayed/incomplete reconstitution of the OE following injury. To directly test this hypothesis, we compared OE regeneration in wild-type (WT) and KO mice following injury induced by intranasal irrigation of Triton X-100. OE was collected at 0, 3, 7, 21, 42, and 56 days post lesion. The …

Reconstitution Of The Olfactory Epithelium Following Injury In Apoe-Deficient Mice, Britto Nathan, Salina Gairhe, Ikemefuna Nwosu, Stephen Clark, Robert Struble

Faculty Research & Creative Activity

ApoE, a protein component of lipoproteins, is extensively expressed in the primary olfactory pathway. Because apoE has been shown to play a vital role in nerve repair and remodeling, we hypothesized that apoE expression will increase in the injured olfactory epithelium (OE), and that apoE deficiency in apoE knockout (KO) mice will lead to delayed/incomplete reconstitution of the OE following injury. To directly test this hypothesis, we compared OE regeneration in wild-type (WT) and KO mice following injury induced by intranasal irrigation of Triton X-100. OE was collected at 0, 3, 7, 21, 42, and 56 days post lesion. The …

Surveys Of Stylisma Pickeringii Var. Pattersonii (Convolvulaceae), Its Associated Plant Species, And Its Insect Visitors, Ann E. Claerbout, Brent L. Todd, Janice M. Coons, Henry R. Owen, Donald W. Webb, John E. Ebinger, William E. Mcclain

Faculty Research & Creative Activity

Stylisma pickeringii var. pattersonii (Convolvulaceae) is endangered in Illinois and Iowa, and occurs in scattered populations in other states. During 1999 and 2000, two insect species previously unreported from Illinois were observed visiting its flowers. This study was undertaken to survey additional insect visitors, as well as to characterize the plant community where S. pickeringii occurs. The objectives were to survey: 1) floral traits (anthesis and flower density) of S. pickeringii, 2) associated plant species, and 3) insect visitor characteristics. Floral traits were determined and associated plant species surveyed in Mason County (degraded hay field on private property) and Henderson …

Liana Host Preference And Implications For Deciduous Forest Regeneration, Laura M. Ladwig, Scott J. Meiners

Faculty Research & Creative Activity

Lianas have the potential to shape forest communities and alter forest regeneration. However, impacts of lianas on forest regeneration, particularly in temperate forests, are largely unstudied. To understand potential liana impacts on the community we need to first know the location and intensity of liana burdens on host trees. We examined liana-tree host references within a series of young regenerating deciduous forests in the Piedmont region of New Jersey, USA. Established trees ($ 5 cm dbh) and the lianas associated with each tree were surveyed in 2008. The five most abundant liana species were Celastrus orbiculatus, Lonicera japonica, Parthenocissus quinquefolia, …

Spatiotemporal Dynamics Of Lianas During 50 Years Of Succession To Temperate Forest, Laura Ladwig, Scott J. Meiners

Faculty Research & Creative Activity

Although they are important components of forest communities, the general ecology and spatiotemporal patterns of temperate lianas during forest regeneration are largely unknown. The dependence of lianas on other plants for physical support makes them a potentially important driver of community dynamics. We examined 50 years of vegetation data from an old-field succession study to determine the dynamics and community controls on liana expansion within the Piedmont region of New Jersey, USA. Four lianas, Lonicera japonica, Parthenocissus quinquefolia, Toxicodendron radicans, and Vitis spp., occurred in enough abundance for detailed analyses. In general, liana cover peaked during mid-succession (20–30 years post-abandonment) …

Allelopathic Effects Of Goldenrod Species On Turnover In Successional Communities, Nikki Pisula, Scott J. Meiners

Faculty Research & Creative Activity

While goldenrod species are often found to be allelopathic in laboratory settings, its importance in controlling plant community dynamics has been much more difficult to assess. We designed a study to determine whether allelopathy is related to the success of goldenrods in abandoned agricultural land. To accomplish this, we conducted laboratory bioassays for six co-occurring goldenrod species and compared these results to the cover and impacts of these species in the field. We determined the germination responses of two target species to a gradient of leaf extract concentrations to assess the allelopathic potential of these goldenrods. We also used long-term …

Dna Double-Strand Breakage As An Endpoint To Examine Metal And Radionuclide Exposure Effects To Water Snakes On A Nuclear Industrial Site, Stephanie M. Murray, Karen F. Gaines, James M. Novak, Michael Gochfeld, Joanna Burger

Faculty Research & Creative Activity

This study examined metal levels (especially U and Ni) in the tail tissues of water snakes from contaminated (Tim’s Branch) and reference areas on the Department of Energy’s Savannah River Site (SRS). Home ranges of snakes were quantified to determine the ratio of the habitat that they use in relation to the contaminated areas to better estimate exposure Compared to conventional methods that do not. The exposure assessment indicated that water snakes in the contaminated areas could expect U exposure at 3–4 orders of magnitude greater than the Agency for Toxic Substances and Disease Registry’sMinimum Risk Level (MRL) from ingestion …

Feathers As Bioindicators Of Pcb Exposure In Clapper Rails, Jay W. Summers, Karen F. Gaines, N. Garvin, Warren L. Stephens Jr., James C. Cumbee Jr., Gary L. Mills

Faculty Research & Creative Activity

In this study we used feathers to biomonitor exposure to the polychlorinated biphenyl (PCB) Aroclor 1268 congener mixture in clapper rails (Rallus longirostris). This species has been used as an indicator species of environmental damage for the LCP superfund site located in Brunswick, GA, USA which is contaminated with Aroclor 1268, a congener mixture that has been used in limited amounts elsewhere and therefore can be used as a contaminant marker. The Aroclor 1268 congener mixture, including congener profiles, were quantified in feathers using gas chromatography (GC). Concurrently, each sample was quantified for the total Aroclor 1268 congener mixture using …

A Sketch-Based Language For Representing Uncertainty In The Locations Of Origin Of Herbarium Specimens, Barry J. Kronenfeld, Andrew Weeks

Faculty Research and Creative Activity

Uncertainty fields have been suggested as an appropriate model for retrospective georeferencing of herbarium specimens. Previous work has focused only on automated data capture methods, but techniques for manual data specification may be able to harness human spatial cognition skills to quickly interpret complex spatial propositions. This paper develops a formal modeling language by which location uncertainty fields can be derived from manually sketched features. The language consists of low-level specification of critical probability isolines from which a surface can be uniquely derived, and high-level specification of features and predicates from which low-level isolines can be derived. In a case …

Review Of The Timber Press Dictionary Of Plant Names, Henry R. Owen

Faculty Research & Creative Activity

No abstract provided.