Biology Commons^™

Undergraduates And Stress, Mahra Crone

Honors Projects

America is facing a serious mental health crisis, which may be an effect of increased chronic stress. Students, in particular, are vulnerable to this hazard as most face a moderate to extreme amount of stress. The programs which colleges and universities have put into place are outdated. Ineffective treatment of mental health crises leads to disastrous consequences. The present study analyzed the effects of major and grade level on stress level and sources of stress for undergraduate universities at both a large, public university and a small, private college. The author found that a student’s grade level and choice of …

Biology Of Sharks And Their Relatives Bio 422, Joanna Burkhardt

Library Impact Statements

No abstract provided.

Trematodes And Neorickettsia: Diversity Of Digeneans And Their Bacterial Endosymbionts (Neorickettsia) In Mollusk First Intermediate Hosts From Eastern Mongolia, Morgan Gallahue

Honors College Theses

This study focused on the survey of 34 freshwater snail samples collected from NE Mongolia for larval flatworm parasites in the class Trematoda. 32 of the snail samples were infected, and the parasites were identified based on morphology and DNA sequences. Nine of the identified parasite samples were screened for the presence of bacterial endosymbionts in the genus Neorickettsia in the family Anaplasmataceae. All of the samples screened for Neorickettsia were negative for the bacterium. Species of Neorickettsia are known to cause several diseases such as Sennetsu Fever (in humans) and Potomac Horse Fever. There have been relatively few reliable …

Mammal Species Inventory Using Various Trapping Methods In Zone 4 Of Billy Barquedier National Park, Belize During Rainy Season, Mersady Redding

Animal Science Undergraduate Honors Theses

Belize is a small country, but it is extremely ecologically diverse. Based on the few studies conducted in Belize, the abundance of mammals is low but diversity is high. Particular findings note the number and identity of species differed between four sites in the Maya Mountains of Belize, indicating that a data set from a single site is not representative of the Neotropical region. Insufficient data is available to estimate current species richness of many areas in Belize, including Billy Barquedier National Park (BBNP). The objective of this study was to explore trapping and documentation methods of terrestrial mammals in …

Morphology, Molecular Characterization And Habitat Preference Of Harmful Benthic Dinoflagellate Gambierdiscus (Dinophyceae) In Malaysia, Nurin Izzati Mustapa

Student Works (2020-2029)

Ciguatera fish poisoning (CFP) is a type of illness that causes human intoxication after consuming contaminated coral fishes. The neurotoxins, ciguatoxins, are produced by species of Gambierdiscus, one of the harmful benthic dinoflagellates. Identification of harmful dinoflagellate species is important to gain further insights into the global dispersion. In this study, morphological characteristics of species in the genus Gambierdiscus and their habitat preferences were investigated. Field sampling was undertaken at Pulau Rawa, Terengganu and Pulau Sibu, Johor. Single cells of Gambierdiscus were isolated and clonal cultures were established. Morphology of Gambierdiscus was examined by using light and scanning electron microscopes. …

Spatial And Temporal Variation Of Offshore Wind Power And Its Values Along The Central California Coast, Yi-Hui Wang, Ryan K. Walter, Crow White, Matthew D. Kehrli, Stephen F. Hamilton, Patrick H. Soper, Benjamin I. Ruttenberg

Physics

The analysis of the spatiotemporal variability of wind power remains limited during the planning stage of an offshore wind farm. This study provides a framework to investigate how offshore wind power varies along the Central California Coast over diurnal and seasonal time scales, which is critical for reliability and functionality of the grid system. We find that offshore wind power in this region peaks during evening hours across all seasons and maximizes in spring and summer. The timing of peak offshore wind power production better aligns with that of peak demand across California than solar and land-based wind power production, …

Undergraduate Research Science: Principles And Practice Bio 200, Michael Cerbo

Library Impact Statements

No abstract provided.

Amendments To The 1995 Offshore Constitutional Settlement, Department Of Fisheries

Fisheries Management Papers

No abstract provided.

Where To Forage When Afraid: Does Perceived Risk Impair Use Of The Foodscape?, Samantha P.H. Dwinnell, Hall Sawyer, Jill E. Randall, Jeffery L. Beck, Jennifer S. Forbey, Gary L. Fralick, Kevin L. Monteith

Biology Faculty Publications and Presentations

The availability and quality of forage on the landscape constitute the foodscape within which animals make behavioral decisions to acquire food. Novel changes to the foodscape, such as human disturbance, can alter behavioral decisions that favor avoidance of perceived risk over food acquisition. Although behavioral changes and population declines often coincide with the introduction of human disturbance, the link(s) between behavior and population trajectory are difficult to elucidate. To identify a pathway by which human disturbance may affect ungulate populations, we tested the Behaviorally Mediated Forage‐Loss Hypothesis, wherein behavioral avoidance is predicted to reduce use of available forage adjacent to …

Leopards Are Good To Think With: Spotting The Zanzibar Leopard In Jozani Forest, Andrew Weier

Independent Study Project (ISP) Collection

In this project, the modern narrative of the Zanzibar leopard was studied in Jozani-Chwaka Bay National Park. Game cameras were installed and various locations around the national park to try and gather primary evidence that supported the existence of a leopard population in the forest. In addition, local community members were interviewed about recent leopard related activities. No biological evidence was gathered that supported the existence of the Zanzibar leopard and information collected from interviews indicated a potential shift in which other organisms are considered leopards. Recommendations were made for future research to be able to better understand the complex …

Why We Can’T Solve The Opioid Problem, Wayne F. Coombs, Ph.D.

Journal of Appalachian Health

Appalachia’s opioid epidemic is a complex, systemic problem being addressed by limited intervention processes conceptualized through narrow disciplinary models that are not working. We need a new comprehensive, collaborative approach if we ever hope to find solutions to this problem.

Biology Of Human Health And Disease Bio 482g, Michael Cerbo

Library Impact Statements

No abstract provided.

What Do Agricultural And Biological Science Students Use? A Bibliometric Analysis Of Undergraduate Research Projects, Jerome Idiegbeyan-Ose, Ayooluwa Aregbesola, Sols Owolabi, Toluwani Eyiolorunshe, Ayotunde Owolabi

Library Philosophy and Practice (e-journal)

The study investigate the citation pattern of undergraduate projects in a private university, Nigeria. Bibliometric method was adopted for the study to analyze the information sources cited in the research projects. The coverage of the study was from 2015 to 2018 set of graduates. Findings revealed that Animal Science programme accounted for the highest citations, while Agricultural Economics had the lowest citations. It was also discovered that an average of 49 citations per project were recorded. Journal articles and books were the most cited materials. The paper concluded and made recommendations.

Biology Of Medicine Bio 481x, Michael Cerbo

Library Impact Statements

No abstract provided.

"The Dead Shall Be Raised": Multidisciplinary Analysis Of Human Skeletons Reveals Complexity In 19th Century Immigrant Socioeconomic History And Identity In New Haven, Connecticut, Gary P. Aronsen, Lars Fehren-Schmitz, John Krigbaum, George D. Kamenov, Gerald J. Conlogue, Christina Warinner, Andrew T. Ozga, Krithivasan Sankaranarayanan, Anthony Griego, Daniel W. Deluca, Howard T. Eckels, Romuald K. Byczkiewicz, Tania Grgurich, Natalie A. Pelletier, Sarah A. Brownlee, Ana Marichal, Kylie Williamson, Yukiko Tonoike, Nicholas F. Bellantoni

Biology Faculty Articles

In July 2011, renovations to Yale-New Haven Hospital inadvertently exposed the cemetery of Christ Church, New Haven, Connecticut’s first Catholic cemetery. While this cemetery was active between 1833 and 1851, both the church and its cemetery disappeared from public records, making the discovery serendipitous. Four relatively well-preserved adult skeletons were recovered with few artifacts. All four individuals show indicators of manual labor, health and disease stressors, and dental health issues. Two show indicators of trauma, with the possibility of judicial hanging in one individual. Musculoskeletal markings are consistent with physical stress, and two individuals have arthritic indicators of repetitive movement/specialized …

Nature And Nurture: How Our Genes And Environments Shape Our Lives Bio 440g, Michael Cerbo

Library Impact Statements

No abstract provided.

Methodological Advances For Understanding Social Connectivity And Environmental Implications In Multi-Use Landscapes, Matthew Clark

Boise State University Theses and Dissertations

Integrated social-ecological systems research is challenging; complicated feedback and interactions across scales in multi-use landscapes are difficult to decouple. Novel methods and innovative data sources are needed to advance social-ecological systems research. In this thesis, we use network science as a means of explicitly assessing feedback between social and ecological systems, and internet search data to better predict visitation in protected areas. This thesis seeks to provide empirical examples of emerging social-ecological systems science methods as a precedent for resource managers on-the-ground, as well as extending the line of scientific inquiry on the subject

In the first chapter of this …

Correcting Forensic Dna Errors, Greg Hampikian

Biology Faculty Publications and Presentations

DNA mixture interpretation can produce opposing conclusions by qualified forensic analysts, even within the same laboratory. The long-delayed publication of the National Institutes of Standards and Technology (NIST) study of 109 North American crime laboratories in this journal demonstrates this most clearly. This latest study supports earlier work that shows common methods such as the Combined Probability of Inclusion (CPI) have wrongly included innocent people as contributors to DNA mixtures.The 2016 President’s Council of Advisors on Science and Technology report concluded,“In summary, the interpretation of complex DNA mixtures with the CPI statistic has been an inadequately specified—and thus inappropriately subjective—method. …

Coral Reef Change Detection In Remote Pacific Islands Using Support Vector Machine Classifiers, Justin J. Gapper, Hesham El-Askary, Erik Linstead, Thomas Piechota

Mathematics, Physics, and Computer Science Faculty Articles and Research

Despite the abundance of research on coral reef change detection, few studies have been conducted to assess the spatial generalization principles of a live coral cover classifier trained using remote sensing data from multiple locations. The aim of this study is to develop a machine learning classifier for coral dominated benthic cover-type class (CDBCTC) based on ground truth observations and Landsat images, evaluate the performance of this classifier when tested against new data, then deploy the classifier to perform CDBCTC change analysis of multiple locations. The proposed framework includes image calibration, support vector machine (SVM) training and tuning, statistical assessment …

Sex-Specific Personalities In The Purple Marsh Crab, Jillian Sterman, Jessica Barton, Panagiota Delmedico, Samantha Sweeney

DePaul Discoveries

Animals are considered to possess personalities when individuals differ in behavior, and these differences are consistent between situations. Several studies have identified personalities in diverse groups but less is known about personality variation between the sexes. In this study, we examined variation in two key personality traits (boldness, activity) in female and male purple marsh crabs (Sesarma reticulatum) using a semi-field approach. Specifically, we measured boldness and activity on two consecutive days using the same behavioral assays during each time point. Consistency (personality) was determined using Kendall’s coefficient of concordance based on Spearman correlation coefficients for each behavior. …

Solanum Plastisexum, An Enigmatic New Bush Tomato From The Australian Monsoon Tropics Exhibiting Breeding System Fluidity., Angela J. Mcdonnell, Heather B. Wetreich, Jason T. Cantley, Peter Jobson, Christopher T. Martine

Faculty Journal Articles

A bush tomato that has evaded classification by solanologists for decades has been identified and is described as a new species belonging to the Australian “Solanum dioicum group” of the Ord Victoria Plain biogeographic region in the monsoon tropics of the Northern Territory. Although now recognised to be andromonoecious, S. plastisexum Martine & McDonnell, sp. nov. exhibits multiple reproductive phenotypes, with solitary perfect flowers, a few staminate flowers or with cymes composed of a basal hermaphrodite and an extended rachis of several to many staminate flowers. When in fruit, the distal rachis may abcise and drop. A member of …

Opportunities For Self-Evaluation Increase Student Calibration In An Introductory Biology Course, Jennifer L. Osterhage, Ellen Usher, Trisha A. Douin, William M. Bailey

Biology Faculty Publications

Accurate self-evaluation is critical for learning. Calibration describes the relationship between learners’ perception of their performance and their actual performance on a task. Here, we describe two studies aimed at assessing and improving student calibration in a first-semester introductory biology course at a 4-year public institution. Study 1 investigated students’ (n = 310) calibration (the difference between estimated and actual exam performance) across one semester. Students were significantly miscalibrated for the first exam: their predicted scores were, on average, significantly higher than their actual scores. The lowest-performing students had the most inaccurate estimates. Calibration improved with each exam. By …

The Potential Of Socio-Biologically Relevant Mobile Applications To Attract Girls To Stem, Vanaja Nethi, Santanu De

FDLA Journal

Stimulating girls’ interest in science, technology, engineering and mathematics (STEM) when they are in school, and sustaining that interest, is critical in motivating girls to choose STEM-related disciplines in higher education and enter STEM careers. Research indicates that girls show an interest in STEM until about 11-12 years of age, but this starts to wane by the time they are 15-16 years. Thus, there is a clear need to focus on sustaining the interest of girls in STEM at middle or high school levels. Research has shown that one of the main drivers that impact girls’ interest in STEM is …

Territorial Behavior Of The Ozark Zigzag Salamander, Plethodon Angusticlavius, Altered By Mode Of Predator Cue And Sex Of Intruder, Sarah E. Heimbach

Graduate Theses/Dissertations

Territorial defense in many species must be balanced with trade-offs in activities such as reproduction and predator avoidance. Adjusting behavior based on current assessments of predation risk and the cost of maintaining or gaining a territory is one way that individuals can balance trade-offs to maximize fitness. I conducted two experiments to determine how Ozark zigzag salamanders, Plethodon angusticlavius, adjust their territorial behavior-based predation risk. First, I tested whether male and female territorial intruders changed their competitive behavior according to whether predation risk is assessed via unimodal (chemical) or multimodal (chemical + physical) cues. Females and males responded differently to …

Microdamage As A Bone Quality Component: Practical Guidelines For The Two‐Dimensional Analysis Of Linear Microcracks In Human Cortical Bone, Victoria M. Dominguez, Amanda M. Agnew

Publications and Research

Microdamage is a component of bone quality believed to play an integral role in bone health. However, comparability between existing studies is fraught with issues due to highly variable methods of sample preparation and poorly defined quantification criteria. To address these issues, this article has two aims. First, detailed methods for preparation and analysis of linear microcracks in human ribs, specifically addressing troubleshooting issues cited in previous studies, are laid out. Second, new, partially validated criteria are proposed in an effort to reduce subjective differences in microcrack counts and measures, ensuring more comparable results between studies. Revised definitions based on …

Developing Sensory Behavioral Assays For Zebrafish Autism Model, Shannon Wagner

Honors College Theses

Individuals of all ages can suffer from a wide variety of symptoms and disabilities that could be diagnosed as Autism Spectrum Disorder (ASD). Due to new methods and technology, individuals are now being diagnosed in the first two years of their life, which is when the signs of ASD are initially exhibited. Individuals diagnosed with ASD share many similar disabilities and symptoms such as hyperactivity to social, visual, and auditory stimuli, as well as hyposensitivity to olfactory stimuli. Neural circuit-based alterations are widely considered as a cause for these behavioral aberrations. We have created behavioral assays using zebrafish larvae to …

Rising Rural Body-Mass Index Is The Main Driver Of The Global Obesity Epidemic In Adults, Con Burns, Tara Coppinger, Janette Walton, Et Al

Publications

Body-mass index (BMI) has increased steadily in most countries in parallel with a rise in the proportion of the population who live in cities1,2. This has led to a widely reported view that urbanization is one of the most important drivers of the global rise in obesity3,4,5,6. Here we use 2,009 population-based studies, with measurements of height and weight in more than 112 million adults, to report national, regional and global trends in mean BMI segregated by place of residence (a rural or urban area) from 1985 to …

Resiliency In Cranial Bones In Relation To Age And Trauma, Jada Dubose

CURCE Annual Undergraduate Conference

The development of bone, nonetheless the skull, may be a major line of defense in relation to traumas they may face. As individuals get older, their bone density decreases for a number of mechanical and hormonal reasons, weakening the bone and increasing fragility. This decreased bone mass density, along with its increased risk of fragility, often lead to a higher likelihood of fractures and severe traumatic injuries; this combination of factors is a lot greater than in younger individuals. This study will evaluate skulls thickness, cross referenced by age and sex, will determine resiliency in terms of the biological structure …

The Diversity Of Terrestrial Mammals Surrounding Waterfall At Billy Barquedier National Park, Kelsey Johnson

Animal Science Undergraduate Honors Theses

Billy Barquedier is a National Park located in the Stann Creek district of Belize that contains Neotropical vegetation and wildlife. This study was performed in order to provide a baseline inventory and appearance frequency patterns of the terrestrial mammals located within Zone 1 of the park near a waterfall. The goal of the data and information collected during this study is to gain a greater understanding of the biodiversity and activity patterns of terrestrial mammals within the park and across Belize as a whole. The use of camera traps, small Sherman live traps, large live traps, and tracking methods were …

The Abundance, Geographical Distribution And Habitat Use Of An Introduced Patas Monkey (Erythrocebus Patas) Population In Southwest Puerto Rico, Magaly Massanet

Graduate Theses

The southwest portion of Puerto Rico is home to introduced free-ranging populations of patas (Erythrocebus patas) and rhesus macaque (Macaca mulatta) monkeys. The rhesus macaque population originated from a colony established in 1961 on the islands of Guayacán and Cuevas off the southwest coast of Puerto Rico as part of the La Parguera Primate Research Center, which was administered by the Caribbean Primate Research Center. The descendants of these escapees have established free-ranging introduced monkey populations in mainland southwest Puerto Rico and the only previous study done on their ecology was conducted from 1990 to 1993 by González- Martínez (1995). …