Biology Commons^™

Managing For Radical Ecosystem Change: Applying The Resist-Accept-Direct (Rad) Framework, Abigail J. Lynch, Laura M. Thompson, Erik A. Beever, David N. Cole, Augustin C. Engman, Cat Hawkins Hoffman, Stephen T. Jackson, Trevor J. Krabbenhoft, David J. Lawrence, Douglas Limpinsel, Robert T. Magill, Tracy A. Melvin, John M. Morton, Robert Newman, Jay O. Peterson, Mark T. Porath, Frank J. Rahel, Gregor W. Schuurman, Suresh A. Sethi, Jennifer L. Wilkening

Biology Faculty Publications

Ecosystem transformation involves the emergence of persistent ecological or social–ecological systems that diverge, dramatically and irreversibly, from prior ecosystem structure and function. Such transformations are occurring at increasing rates across the planet in response to changes in climate, land use, and other factors. Consequently, a dynamic view of ecosystem processes that accommodates rapid, irreversible change will be critical for effectively conserving fish, wildlife, and other natural resources, and maintaining ecosystem services. However, managing ecosystems toward states with novel structure and function is an inherently unpredictable and difficult task. Managers navigating ecosystem transformation can benefit from considering broader objectives, beyond a …

Stream Sediment Monitoring In Morehead Kentucky, Kristopher Krolikowski, Jen O'Keefe

2021 Celebration of Student Scholarship - Oral Presentations

Sediment loads in stream systems play a big role in how overall runoff behaves. Streams naturally transport sediment at various ratios depending on precipitation. When vegetation is removed in upstream environments, sediment loads on streams increase. Sudden increases of sediments in streams can cause many issues, such as flooding or stream re-direction. In Morehead, KY, large-scale logging operations on the ridge above Knapp Avenue and on the ridge above the north end of Allen Avenue have caused increased sediment load in a small stream called Oxley Branch. This stream flows south parallel to Knapp Avenue and along the eastern property …

College Of Natural Sciences Newsletter, July 2021, College Of Natural Sciences

College of Natural Sciences Newsletters and Reports

Volume 2, Issue 7.

Page 1 Dean's Message
Page 2 Celebrating Three Years
Page 3 Summer School Travel
Page 4 Media Coverage of CNS
Page 5 Chemistry Teachers Visit
Page 5 Remembering Dr. Warren Hein
Page 6 Research Spotlights: Undergraduate Summer Experiences
Page 7 Open PRAIRIE Data; Grants Awarded in CNS

Of Biodiversity, Boundaries, And Distribution: The Myxomycetes Of The Philippines And Beyond, Sittie Aisha Bustamante Macabago

Graduate Theses and Dissertations

This dissertation contains a compilation of independently performed studies primarily focusing on the myxomycetes (plasmodial slime molds) from the Philippines and integrating local and worldwide data to demonstrate regional and global trends. The major themes include the following: (I) a review of the diverse group of spore-producing amoeboid protists, including the myxomycetes; (II-IV) diversity assessments in three different groups of islands in the Philippine archipelago; (V) mapping the myxomycetes found in the Philippines for databasing and analyzing the geocoded data; (VI) a study on regional boundaries, including the Philippines, using myxomycete species composition; and, (VII) creating a global species distribution …

Examining Melt Pond Dynamics And Light Availability In The Arctic Ocean Via High Resolution Satellite Imagery, Austin Wesley Abbott

OES Theses and Dissertations

As the Arctic experiences consequences of climate change, a shift from thicker, multi-year ice to thinner, first-year ice has been observed. First-year ice is prone to extensive pools of meltwater (“melt ponds”) forming on its surface, which enhance light transmission to the ocean. Changes in the timing and distribution of melt pond formation and associated increases in under-ice light availability are the primary drivers for seasonal progression of water column primary production and warming. Observations of melt pond development and distribution require meter scale resolution and have traditionally been limited to airborne images. However, recent advances in high spatial resolution …

Implications Of The Links Between Demography And Ecology For The Economy Of The Republic Of Karakalpakstan, Keunimjay Allanazarov, Gulya Khodjaeva, Katherine Shields

Karakalpak Scientific Journal

This article analyzes the impact of demographic factor on territorial organization of production in rural areas of the Republic of Karakalpakstan and reveals the main trends in production development. The analysis of statistical data of rural areas is given and proposals to improve the negative situation are given. More than 1306.8 thousand people live in rural areas of the Republic of Karakalpakstan, where they are concentrated in 1187 settlements, 26 urban settlements, and 11 towns of district subordination. All this testifies to the presence of large undeveloped production reserves and huge human potential. However, due to reduction of Amudarya water …

Cetacean Maternal Investment: Importance In Conservation Across Species And Drivers For Interspecific Altruism, Christopher Klein

USF Tampa Graduate Theses and Dissertations

Cetacean maternal investments can be useful for conservation management as well as examining behaviors such as interspecific altruism in the humpback whale, Megaptera novaeangliae. Cetaceans are among the most threatened group of marine mammals. In the second chapter, maternal investments across ~90 species/subspecies of Cetacea were analyzed to aid in the understanding of recovery/replacement for conservation and management. Using Principal Components Analysis (PCA), a relative maternal-investment index for 41 cetacean species was built. The maternal-investment index was a composite of four maternal-investment variables, the duration of gestation, lactation, calving intervals, and the number of reproduction years per female per species. …

Prawn Resource Of Exmouth Gulf Harvest Strategy : 2021-2026 : Version 2.0, Department Of Fisheries

Fisheries Management Papers

No abstract provided.

College Of Natural Sciences Newsletter, June 2021, College Of Natural Sciences

College of Natural Sciences Newsletters and Reports

Volume 2, Issue 6.

Page 1 Dean's Message
Page 2-6 Remembering the Life of Dr. Pengra and Celebrating His legacy for Entire Generations to Come.

Detecting Bacterial Species From Ancient Human Skeletal Samples, Ariel Owens, Daisy Mcgrath, Tsai-Tien Tseng

Symposium of Student Scholars

This paleopathological study aims to identify Mycobacterium tuberculosis complex (MTBC), Mycobacterium avium complex (MAC) and other Mycobacterium species in silico from skeletal samples that belonged to 28 Polish individuals in the Neolithic period under PRJNA422903 from the Sequence Read Archive (SRA). After next-generation sequencing (NGS), bioinformatics methods are heavily relied upon for identification of pathogens from complex samples. We implemented a bioinformatics pipeline, with custom-built databases, utilizing the following software tools: Trim Galore! and Kraken2. After adapter trimming, Kraken2 was used for taxonomic classifications. We have found that Mycobacterium is present in all 28 individuals. The average percentage of MAC …

Evaluation Of The Effect Of The Humic Acid Inhibitor On Forensic Genetic Investigations Of Human Skeletal Remains, Madeline King

Honors Theses

Postmortem survival of DNA in human skeletal remains occurs due to the compact microstructure of the skeleton and its ability to provide a strong, protective physical barrier to environmental insults. On a molecular level, DNA preservation in bones/teeth involves electrostatic interactions between the negatively-charged DNA backbone and positively charged calcium residues in hydroxyapatite, the latter of which is one of the main components of bone microstructure. Despite these protections, over time endogenous DNA becomes damaged, limiting our ability to detect it and affecting its utility in making a positive identification. Hence, forensic genetic investigations of unidentified human remains (UHRs) are …

Factors Affecting Pubertal Timing And Perceptions Of Birth Control, Ashley L. Gomm

Honors Program Theses and Projects

Menarche is the occurrence of a first menstrual period in the female adolescent. The age of menarche has been decreasing over the past 150 years. While some factors have been identified, like increased body mass index (BMI), such factors alone cannot account for the overall decrease in age.

Due to the decreased age of menarche and as additional uses for oral contraceptive pills (OCPs) have been identified, it is becoming clear that females no longer use “birth control” or “oral contraceptives” primarily to prevent pregnancy, but instead for a myriad other reasons including “menstrual suppression.” Menstrual suppression is …

Big Five Personality Traits And Political Orientation: An Inquiry Into Political Beliefs, Ian E. Phillips

The Downtown Review: An Interdisciplinary Journal Written and Peer-Reviewed by Mandel Honors College Students at Cleveland State University

Personality research centered on the Big Five personality traits has heavily impacted our understanding in regards to what forces orient a person on a political spectrum. Examining how personality differences interact with political orientation, this research seeks to provide information on what makes someone either more or less likely to be liberal or conservative based on their temperament. In this paper, previous personality research is synthesized into one discussion, centered on what the effects of each trait are and how they impact political orientation, the heritability of personality, and what implications there are for such research in the realm of …

Stage Of Estrous Cycle Influences Behavior After Social Stress, Alexander Jonah Rodriguez

Honors Thesis

Since women are almost twice as likely to develop major depression compared to men, research into this and other potentially debilitating mood disorders using behavioral studies should involve females despite hormonal, physiological, and potential behavior changes due to reproductive cyclicity. Until recently, most studies exclusively used males, thus limiting results of previous research to half of the population. Using adult female C57BL/6N mice as model organisms, we exposed them to novel forms of social stress across five days which encompassed the four-day estrous cycle to determine if the stages of the estrous cycle had an impact on behavior when they …

Intergenerational Embodiment Of Stress : How The Broader Sociocultural Environment Can Shape Child Growth And Development, Elizabeth A. Holdsworth

Legacy Theses & Dissertations (2009 - 2024)

Childhood growth has been a means of identifying systemic, material inequalities within populations. The plasticity of growth is responsive to multiple environmental factors, most notably adequate nutrition, but also psychosocial stress. Psychosocial stress can be a function of the social and political economic ecology, reinforcing power hierarchies within societies. This dissertation proposes that childhood growth can also reflect inequality in the distribution of psychosocial stress exposure through mothers’ feelings of a chronically stressful environment conveyed through maternal-infant interactions.

Shelter Dogs Need A Home: The Effect Of Enrichment And Human Contact On The Welfare And Adoptability Of Shelter Dogs, Hannah G. Clark

Honors Projects

It comes as no surprise that an animal shelter can be a stressful place for dogs. Shelter conditions, accompanied by multiple, novel stimuli, produce a stressful environment that cause hormonal and behavioral responses in dogs housed in shelters. Many of the stereotypical behaviors produced by the stress of living in a shelter, which tend to worsen as length of stay increases, are undesirable to potential adopters. However, many studies have shown that enrichment with a variety of toys, exercise, and human interaction can buffer the stress response in shelter dogs and improve their well-being. Implementing obedience training and temporary fostering …

Hydrologic Variation Influences Stream Fish Assemblage Dynamics Through Flow Regime And Drought, Daniel D. Magoulick, Matthew P. Dekar, Shawn W. Hodges, Mandy K. Scott, Michael R. Rabalais, Christopher M. Bare

Biological Sciences Faculty Publications and Presentations

Hydrologic variation can play a major role in structuring stream fish assemblages and relationships between hydrology and biology are likely to be influenced by flow regime. We hypothesized that more variable flow regimes would have lower and more variable species richness, higher species turnover and lower assemblage stability, and greater abiotic environment-fish relationships than more stable flow regimes. We sampled habitats (pool, run, and riffle) in three Runoff/Intermittent Flashy streams (highly variable flow regime) and three Groundwater Flashy streams (less variable flow regime) seasonally (spring, early summer, summer and autumn) in 2002 (drought year) and 2003 (wet year). We used …

College Of Natural Sciences Newsletter, May 2021, College Of Natural Sciences

College of Natural Sciences Newsletters and Reports

Volume 2, Issue 5.

Page 1 Dean's Message
Page 2 - 3 Awards & Recognition
Page 4 Research Spotlight: Dr. Xiaoyang Zhang
Page 5 Upcoming Retirements
Page 6 - 7 Geography Alumni Social, Recent Media Coverage
Page 8 Open PRAIRIE Data
Page 9 - 11 Spring 2021 Dean's List and Academic Recognitions

The Importance Of A Multidisciplinary Approach To Public Health: Addressing Food Insecurity Through A Biological And Sociological Lens, Chloe Grant

Honors Theses

Plants can sense the change of 1 ^oC in their growth environment and thus global climate change has a great impact on plant growth and development. The phenomenon that warm non-stress temperatures promote stem and petiole elongation, as well as leaf hyponastic growth, is collectively known as thermomorphogenesis. While it is known that the basic helix-loop-helix (bHLH) transcription factor PIF4 is highly inducible by temperature elevations and controls thermomorphogenesis in dicots (e.g., Arabidopsis thaliana), the molecular mechanism underlying thermomorphogenetic growth in monocots is not clear. In this study, I identify PIF4 orthologs in several economically important monocotyledonous species and …

The Genetic Links Between Archaic And Modern Humans, Maria J. Orellana Rosales

Thinking Matters Symposium

Our modern physiology is the mixture of many archaic humans that once roamed our planet. The evidence of these archaic humans is still present in our DNA. This poster reviews how our understanding of ancient human genetics has drastically changed due to advances in molecular genetics. Neanderthal and Denisovan remains have been sequenced for nuclear and mitochondrial DNA. Neanderthal and Denisovan genetic ancestry have been identified by genomic studies in modern human populations across Eurasia and Pacific Island regions. Studies have shown a gene flow of 4±1% from Neanderthals to present-day Eurasians. Whereas, Papuan and Melanesian individuals share 4±0.7% more …

Genetically Modified Organisms Are Important But Also Controversial, Masen Pelletier

Thinking Matters Symposium

Genetically modified organisms (GMOs) are organisms containing a set or multiple sets of genes that have been introduced into the organism using laboratory techniques. In the instance of agriculture, the genes introduced provide advantages for the farmer and consumer by yielding plants that produce greater yields, longer growing seasons, longer shelf lives, greater concentrations of vitamins or add additional vitamins that are novel to the plant. There are two general ways that GM (genetically modified) crops are produced: the addition or removal of genes. This review focuses on an example of each strategy. An example of the latter is GM …

Black-Capped Chickadee (Parus Atricapillus) Food Preference, Isabelle Gilbert

Thinking Matters Symposium

All animals must make decisions on where to find, select, capture, and eat food. These factors contribute to a species’ food preference, such as making decisions on what food to eat based on calories. Optimal foraging theory predicts how an animal behaves when searching for food, including optimization of food type, patch choice, time spent in patches, and movement. All animals also make decisions based on predation risk by avoiding predators and making trade-offs on time spent searching for, pursuing, and handling food. The objective of my study is to examine food preference of black-capped chickadees (Parus atricapillus). Birds may …

Corticospinal Excitability During A Perspective Taking Task As Measured By Tms-Induced Motor Evoked Potentials, Elizabeth Murray, Janet Brenya, Katherine Chavarria, Karen J. Kelly, Anjel Fierst, Nathira Ahmad, Caroline Anton, Layla Shaffer, Kairavi Kapila, Logan Driever, Kayla Weaver, Caroline Dial, Maya Crawford, Iso Hartman, Tommy Infantino, Fiona Butler, Abigail Straus, Shakeera L. Walker, Brianna Balugas, Matthew Pardillo, Briana Goncalves, Julian Keenan

Department of Biology Faculty Scholarship and Creative Works

Only by understanding the ability to take a third-person perspective can we begin to elucidate the neural processes responsible for one’s inimitable conscious experience. The current study examined differences in hemispheric laterality during a first-person perspective (1PP) and third-person perspective (3PP) taking task, using transcranial magnetic stimulation (TMS). Participants were asked to take either the 1PP or 3PP when identifying the number of spheres in a virtual scene. During this task, single-pulse TMS was delivered to the motor cortex of both the left and right hemispheres of 10 healthy volunteers. Measures of TMS-induced motor-evoked potentials (MEPs) of the contralateral abductor …

Different Assessments Of Reactions To Child Sexual Abuse, Dawson Jubin, Louanne Hawkins, Mary Geary

Showcase of Osprey Advancements in Research and Scholarship (SOARS)

The minimization effect occurs when reactions to child sexual abuse are the least negative for adult females and male victims (Cromer & Goldsmith, 2010; Denov, 2003). This effect may be a function of sex stereotypes about men (mean) and women (nurturant) as well as boys (sexually adventurous) and girls (vulnerable) (Leone et al. 2018). We systematically assessed the roles of stereotypes in the minimization effect using multiple measures: self-reported (attitudes) and salivary cortisol (psychophysiological stress). The former is subject to socially describe responding whereas the latter is not. Participants provided an initial saliva sample and were randomly assigned to read …

Ceramic Studio Assistant, Allison Jones, Adam Yungbluth

2021 Celebration of Student Scholarship - Oral Presentations

The research project will focus on learning the various activities involved in running a college level Ceramics Studio. Activities will include clay mixing for Ceramics 1 courses, mixing studio glazes & slips, firing bisque, reduction, soda, & wood kiln, and other activities to improve the Ceramics Studio.

The Art Of Preservation, Sinclaire Dorsey, Melissa Yungbluth

2021 Celebration of Student Scholarship - Oral Presentations

Proper preservation of creative works is imperative to sustaining documentation for future generations’ education. Exhibition designers, such as the students awarded with the undergraduate research fellowship for the Golding-Yang gallery, must be mindful of the environmental factors that impact creative works. For instance, light sensitivity of the materials can be overwhelmed by ultraviolet and infrared radiation produced by the sun. Atmospheric humidity, when not regulated, will destroy irreplaceable artwork that could provide future historians a better understanding of modern culture. Extreme temperatures are devastating to the preservation of artistic works. The regulation of these environmental factors will provide future generations …

Low Stress Handling Techniques In Shelter Animals And The Overall Effects On Physiological Parameters, Ashley Swim, Courtney Smart, Amy Staton

2021 Celebration of Student Scholarship - Oral Presentations

Animal shelters tend to be a very stressful environment for dogs as there are many new sounds, smells, and animals. This stress is not only bad for their psychological health and can lead to behavioral issues, but it can also have an impact on their physical health. Stress impacts multiple systems of the body, resulting in increased heart rate, blood pressure, respiratory rate, temperature and even blood glucose levels in dogs. The impact stress has on these systems can lead to a compromised immune system and increases the probabilities of the dog becoming ill. However, by using Fear Free methods, …

Adverse Experiences, Depression, And Parenting Sensitivity., Lauren Oldiges, Savannah Gillis, Tiffany Hicks, Shari Kidwell

2021 Celebration of Student Scholarship - Oral Presentations

Parental sensitivity is a key determinant of attachment security and child well-being. Yet many parents in our region face challenges to parenting, such as increased exposure to adverse experiences and depression. Both cumulative exposure to adverse experiences and depression symptoms have been associated with increased risk to parenting (Hays-Grudo & Wilson, 2020). The present study explores connections between parents’ sensitivity/synchrony scores on the Toddler CARE-Index (TCI: Crittenden, 2007), Adverse Childhood Experiences (ACEs) amongst parents, and parental depression. As part of a larger longitudinal study of Eastern Kentucky families, 35 children (mean age 4.5 years) and their parents participated in the …

French Textbook Illustrations, Abigail Hall, Nicholas Anderson, Karen Taylor

2021 Celebration of Student Scholarship - Oral Presentations

This project has been an update of an introductory French textbook in order to make the work more cohesive illustratively. Each week we were given a drawing task to go with a chapter or vocabulary assignment to replace, revamp or develop new art work of greater value than the preexisting illustrations.

Relation Among Potential Predictors Of Drug Abuse Risk In Rats, Emma Brock

2021 Celebration of Student Scholarship - Oral Presentations

Animal models have been used to investigate behavioral processes and mechanisms that underlie addiction. A variety of measures have been developed for rats that are modest predictors of drug abuse risk. The purpose of this pilot study was to begin to assess whether several established and potential measures of drug abuse vulnerability were correlated. The subjects were eight adult male Wistar rats. The rats were run on procedures that yielded measures of anxiety, sensation seeking, short term responsive to acutely administered drug, and sensitivity to conditioned stimuli. These measures were correlated with a potential new measure of drug abuse vulnerability—withdrawal …