Biology Commons^™

Deep Learning Can Be Used To Classify And Segment Plant Cell Types In Xylem Tissue, Reem Al Dabagh, Benjamin Shin, Sean Wu, Fabien Scalzo, Helen Holmlund, Jessica Lee, Chris Ghim, Samuel Fitzgerald, Marinna Grijalva

Seaver College Research And Scholarly Achievement Symposium

Studies of plant anatomical traits are essential for understanding plant physiological adaptations to stressful environments. For example, shrubs in the chaparral ecosystem of southern California have adapted various xylem anatomical traits that help them survive drought and freezing. Previous studies have shown that xylem conduits with a narrow diameter allows certain chaparral shrub species to survive temperatures as low as -12 C. Other studies have shown that increased cell wall thickness of fibers surrounding xylem vessels improves resistance to water stress-induced embolism formation. Historically, these studies on xylem anatomical traits have relied on hand measurements of cells in light micrographs, …

Dissecting The Impact Of Medicinal Plants On Systemic Diseases, Karen Ayetiwa

Annual Research Symposium

For this literature review, a range of databases were used such as Google Search, PubMed, and Web of Science (mentioned all the ones you used). The search strategy used was a combination of terms such as "medicinal plant compounds," "plant polysaccharides on metabolic diseases," "effects of berberine on diabetes mellitus," " and "effects of medicinal plants on Alzheimer's." Articles chosen for review were published between 2020 and 2022, and only studies in the English language were considered. The majority of the selected studies were devised to observe and analyze the effects of medicinal plant compounds on various systemic diseases. Medicinal …

Quantifying The Role Of Water Quality On Nitrogen Cycling In A Trophic Estuary, Kayla Gonzalez-Boy

Symposium of Student Scholars

Jobos Bay Estuary is an intertidal, tropical estuary located in southern Puerto Rico. The estuary covers about 12 km² and has a variety of habitats, such as seagrass beds, mangroves, mud flats, and coral reefs, which play important roles in sediment trapping and water quality maintenance. Seagrasses also serve as nursery and feeding grounds and provide shelter for macrofauna. Currently, the role of seagrasses and water quality on nitrogen (N) cycling in trophic estuaries is not well constrained. Understanding variations in sediment-based effects on N cycling rates and transformations, and how they are associated with water quality, is an …

Lichens Of Iller Creek: A Checklist For The Iller Creek Unit, A Division Of Dishman Hills Conservation Area, Spokane Valley, Wa, Devin M. Mumey, Giovanna Bishop, Jessica L. Allen

2023 Symposium

The field of biodiversity documentation encompasses a broad range of research including new species discovery and description, compilation of species present in a given area, and investigation of interspecies interaction. In an era of increasingly devastating and rapid environmental change, documenting biodiversity has become increasingly important. Anthropogenic effects on urban-adjacent natural areas are especially significant, as they can cause numerous, often drastic, responses in ecosystems. Our objective here was to document the lichen biodiversity in a large urban-adjacent protected area: the Iller Creek Unit of the Dishman Hills Conservation Area in Spokane Valley, Washington. This unit encompasses a diversity of …

My Summer Working With Two-Spotted Spider Mites, Renée A. Smith

Undergraduate Student Research Internships Conference

Two-spotted spider mites are a polyphagous pest, capable of eating a magnitude of food crops which causes a large problem for Canadian agriculture. Their ability to consume various crops stems from their ability to adapt to various chemical defence mechanisms. This ability allows them to acquire resistance to many commonly used pesticides. This has resulted in large infections in Canadian farms with few options to prevent the pests from affecting crop yields. Take a look at my project if you'd like to see how the Grbic lab is working to combat this issue using genetic engineering techniques!

A Bacterial Microbiome Analysis Of Solarized Ginseng Garden Soils, Anka Colo

Undergraduate Student Research Internships Conference

American ginseng (Panax quinquefolius) is a highly valued perennial crop grown for its roots during a four-year cultivation cycle. American ginseng is subject to ginseng replant disease (GRD) in which severe root rot develops in newly planted ginseng grown in a former ginseng garden. A common strategy to mitigating GRD is not available and techniques such as fumigation, fungicides, and biocontrol are ineffective, banned, or are slowly being phased out. Alternatively, soil solarization is a pre-plant technique used to treat soil to reduce disease inoculum and alter soil microbiomes. In summer 2019, a six-week soil solarization experiment was …

Comparison Of Plant Richness And Density In Crp-42 Fields Between 2018 And 2022, Liz Wilgenbusch, Ai Wen Ph.D.

Summer Undergraduate Research Program (SURP) Symposium

Recently, the number of pollinators have decreased dramatically throughout the United States. Pollinators play an important role in food production with around ⅓ of the world’s food crops being dependent on pollinators. Providing a high-forage habitat for pollinators is a proposed solution to combat their decline. In the upper Midwest United States, the Conservation Reserve Program (CRP) helps protect pollinator habitats by providing farmers with annual payments to retire their old farmland. The purpose of this study was to compare plant density and richness in CRP fields between year 3 and year 7 post planting to find trends in the …

Genetically Explicit Model May Explain Multigenerational Control Of Emergent Turing Patterns In Hybrid Mimulus, Emily Simmons

Biology and Medicine Through Mathematics Conference

No abstract provided.

Microbial Diversity And Community Structure In Sediments Associated With The Seagrass (Thallassia Testudinum) In Apalachicola Bay, Florida, Rahma Ahmed, Thomas Mcelroy, Troy Mutchler

Symposium of Student Scholars

Seagrass is an angiosperm which provides many ecosystem services in coastal areas, such as providing food, shelter and nurseries for many species, and decreasing the impact of waves on shorelines. A global assessment reported that 29% of known seagrass meadows are in a state of decline due to the effects of human activity. Seagrass is commonly found in shallow marine waters where they form meadows containing a microbiome that plays an important role in providing nutrients for seagrass growth, though little is known about the microorganisms within the seagrass meadow sediments. Our project collected sediments from seagrass meadows and adjacent …

The Plant And The Pathogen: Elucidating The Relationship Between Root-Knot Nematodes, Ph Levels, And Arabidopsis Thaliana Development, Rachel Garnett

Student Scholar Showcase

Root-knot nematodes (RKNs) within the Meloidogyne genus are considered one of the largest threats to plant health and subsequent crop yield and profit (Forghani and Hajihassani 2020; Bernard et al. 2017). As a pest that presents global consequences, its mitigation through sustainable interventions may confer results for the treatment of similar plant pathogens. A member of the Brassicaeae family, Arabidopsis thaliana, was chosen for this study to determine plant responses to RKN-standard pH media. pH was varied between control and experimental groups, and phenotypic variables of primary root length and plant height were observed and analyzed. Wild-type Arabidopsis thaliana …

Comparing Allelochemicals Of ​English Ivy And Native Georgia Plants​, Rebecca Senft

Symposium of Student Scholars

English Ivy (Hedera helix L.) is a common invasive plant causing biodiversity losses across the southeast and parts of the northwestern US. The mechanisms by which Ivy invades native ecosystems are not well understood but may include allelopathy, a process through which one species produces biochemicals that disrupt competitors. These biochemicals are often produced and exuded by roots into soil, making them difficult to isolate. This study used a soil-less hydroponic system and gas-chromatography mass spectroscopy to examine differences in the chemicals produced by roots of native Georgia plants and English Ivy. Our results suggest there are differences in the …

Optimization Of Dna Extraction From Difficult Sandy-Loam Soils, Anka Colo

Undergraduate Student Research Internships Conference

Ginseng is a high value perennial crop grown for its roots. A four-year cultivation cycle is required to obtain marketable ginseng roots, during which a condition called ginseng replant disease (GRD) develops. GRD is characterized by a severe root rot disease, and prevents the growth of newly planted ginseng in a former ginseng garden1. Microbiome analysis of ginseng garden soil will help our understanding of the formation of GRD and its severity. However, extracting DNA from the sandy-loam soils required for ginseng cultivation is difficult. Commercial kits are either too expensive or not applicable to the large volumes of soil …

Eclp Invasive Plant Project: Spot The Invaders, Aida Washburn

Showcase of Osprey Advancements in Research and Scholarship (SOARS)

An Environmental Center Leadership Program Project

Amelia Island is home to many beautiful native plants, but some invasive species have taken residence in the beach area and caused issues to the ecological system. The invasive plants outcompete our native species and can disrupt the shore bird and sea turtle nesting sites. Invasive plants also destabilize our dunes. A native plant is identified as a species that has naturally existed in each place for an extended length of time. Whereas an invasive species displaces and prevents native species from establishing. The goal of this project was to remove invasive plant species …

Florida Mangroves Show No Evidence Of Thermal Acclimation Of Leaf Respiration: Implications For Coastal Carbon Cycling And Future Climate, Kylie Harris, Jeff Chieppa, Matt Sturchio, Michael Aspinwall

Showcase of Osprey Advancements in Research and Scholarship (SOARS)

Temperature controls of physiological processes that regulate C cycling in mangrove ecosystems remain understudied. New studies that investigate mangrove sensitivity to temperature could improve representation of coastal C cycling in global scale models. Respiration represents the second largest C flux between vegetation and the atmosphere, and roughly 50% of plant respiration comes from leaves. Leaf respiration increases with temperature, but thermal acclimation can dampen this response, and mitigate the positive feedback between temperature, respiration, and atmospheric CO2. We tested whether thermal acclimation of leaf respiration (R) to seasonal temperature changes and experimental warming is similar among three common mangrove species …

The Effects Of Trichloroethylene On The Germination And Early Development Of Radish, Butternut Squash, Corn, And Soybean, Sarah Jaksich

UNO Student Research and Creative Activity Fair

Trichloroethylene (TCE) is a small molecule used as a metal degreaser and as an extraction solvent for lipids. Historically, TCE has been used to clean missiles and rockets after testing at military sites. However, TCE has decreased in use due to its potential health hazards. TCE is particularly dangerous because it is soluble in water and easily seeps into ground water. As a result, TCE has contaminated groundwater in Mead, Nebraska. The town is near the formal Nebraska Ordnance Plant, a military factory specializing in bomb assembly, ammonium nitrate production, and explosives burning. Soil sampling in Mead indicated TCE levels …

Influence Of Cattle Grazing On Milkweed And Other Native Forbs, Karen Klug

UNO Student Research and Creative Activity Fair

One of the most identifiable plants of the Great Plains are milkweed species (Asclepias spp.), which are also the only food source for monarch butterfly caterpillars (Danaus plexippus). Conservation of the milkweed population has taken renewed importance as the population of eastern migratory monarchs has dropped by over 80% from 1996 to 2017, largely because of a loss of over 1.3 billion stems of milkweed. As a result of this monarch population decline, it has been petitioned to protect the monarch butterfly population under the US Endangered Species Act. To increase the population size of the …

Beyond The Binary (Part 1): Re-Envisioning The Complexity Of Life History Evolution In The Bromeliaceae With Comparative Data, Rachel Jabaily, Erin Bodine

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

Expression Of Carbohydrates Biosynthetic Genes In Developing Soybean Seeds, Jayden Rosen, Karen A. Hudson

The Summer Undergraduate Research Fellowship (SURF) Symposium

An essential part of livestock diets is soybean meal, which is a major source of protein, but which also consists of antinutritional carbohydrates. Antinutritional carbohydrates such as raffinose and stachyose lead to irritation to the gut for monogastric livestock as well as unhealthy weight gain. A major objective of soybean genetics is to reduce these antinutritional carbohydrates within the seed and increase the levels of good carbohydrates. This will lead to healthier livestock and better meat quality. To select genes potentially responsible for variation in carbohydrate levels in seeds, the expression of genes encoding several biosynthetic enzymes was measured during …

Evaluating Effects Of Gene Mutation And Light Intensity On Arabidopsis Thaliana Development, Carolanne Bekus

Student Scholar Showcase

The completion of sequencing Arabidopsis thaliana’s genome has led to the next crucial challenge of determining gene function in these plants. A. thaliana is a model organism often compared to commercial crops. The discovery of gene function within these plants will aid in giving insight on how gene function can affect commercial crop production. Presented here is an analysis comparing wild-type Columbia (Col-O), to single gene mutants when knocking-out transcriptional factors VPI/ABI3-like 1 (val1) and basic region/leucine zipper motif (bZIP). These single gene mutations may affect several traits that in turn can result in morphological changes and/or …

Investigation Of Antimicrobial Properties Of Rhus Ovata Extracts, Sydney T. Adams

Seaver College Research And Scholarly Achievement Symposium

Native peoples of Southern California historically used a variety of local plants as remedies for illnesses. Chaparral species such as Rhus ovata (sugar bush) were widely available and were used to ease headaches, coughs and chest pains, and colds. In light of the historical importance of this plant and other chaparral species, recent fungal pathogen-induced diebacks of Malosma laurina, a species closely related to R. ovata, have raised questions regarding the innate defenses of these plants against fungal pathogens. We attempted to scientifically evaluate the traditional medicinal use of R. ovata and its antifungal resistance by testing two …

Potential Spread Of The Fungal Pathogen Botryospharea Dothidea From Chaparral Shrubs To Grape Vineyards In The Santa Monica Mountains, Alexandra N. Case, Natalie M. Aguirre, Rodney L. Honeycutt, Stephen D. Davis

Seaver College Research And Scholarly Achievement Symposium

We tested the hypothesis that an opportunistic endophytic fungus, Botryosphaeria dothidea, that frequently infects and causes dieback in species of chaparral shrubs in the Santa Monica Mountains during drought events, may spread to grape vineyards in the Santa Monica Mountains. Recently a dominant chaparral species in coastal exposures of the Santa Monica Mountains, Malosma laurina, has undergone extensive dieback in low elevation, dry sites, in response to historic drought in California, but less dieback in high elevation moist sites. M. laurina frequently grows adjacent grape vineyards. Thus we hypothesized that fungal isolates from a low elevation, dry vineyard …

Getting What You Want: A Compelling, Reusable, One-Page Message., Martin A. Draper, Betsy B. Draper

Academic Chairpersons Conference Proceedings

Using examples from planning and evaluation, government and business models, presenters will share tactics and strategies for simple, concise communications on important issues. Participants will practice by developing a one-page position paper, briefing paper or decision memo.

Hydraulic Mechanisms Of Fungal-Induced Dieback In A Keystone Chaparral Species During Unprecedented Drought In California, Natalie M. Aguirre, Marissa E. Ochoa, Helen I. Holmlund, Frank E. Ewers, Stephen D. Davis

Seaver College Research And Scholarly Achievement Symposium

Between 2012-2016, southern California experienced unprecedented drought that caused dieback in Malosma laurina, a keystone species of chaparral shrub communities. Dieback was especially severe in coastal exposures of the Santa Monica Mountains, leading to whole plant mortality exceeding 50% at some sites. We hypothesized that the endophytic fungus causing the dieback, Botryosphaeria dothidea, was successful in invading the xylem tissue of M. laurina because of protracted water stress, carbon starvation, or a combination of the two. We tested these possibilities in a controlled pot experiment by comparing three treatments, each inoculated with the fungus: (1) irrigated controls (2) …

Small Scale Heterogeneity In Vegetation Structure In A Patch-Burn-Grazing Landscape, Eric G. Behrens

UNO Student Research and Creative Activity Fair

Disturbances are drivers of spatial change in the plant communities of the tallgrass prairie ecosystem. Fire and large herbivore grazing are prevalent disturbances that maintain the vegetation structure and create spatial heterogeneity in vegetation at various scales. The fire-grazing disturbance interaction occurs when areas that have been recently burned are followed by intense grazing due to the high quality of forage regrowth. This interaction has been managed in tallgrass prairies in a homogenous method using uniform burning and grazing and a heterogeneous method using patch-burn-grazing (PBG). Vegetation heterogeneity at a large scale has been studied in PBG and uniformly managed …

Mapping Morels: Predicting The Locations Of Morchella Species Through Environmental Factors Using The Gis System, Emily M. Stanevicius

Celebration of Learning

Morel mushrooms, Morechella esculenta and M. deliciosa, are known delicacies across the globe, ranging from exquisite dishes in French cuisine to Eastern palates such as Japanese Matsutake. According to literature, true morels diverged as their own genus about 129 million years, again which has led to the development of more than 177 species and have been part of the human diet since their beginning. However, the elusiveness of morels has contributed to the mushrooms infamy for rarity, and has even been known to sell for more than $40 per pound. This project seeks to aid in the search for morels …

Effect Of Different Miracle-Gro Concentrations On The Growth Of Wisconsin Fast Plants, Eric D. Shershen, Nicholas M. Orslini, David Channon, Marvin Agyeben

Celebration of Learning

The Wisconsin Fast Plant, Brassica rapa (Brassicaceae) seeds were planted in three, six-celled containers and were filled with standard potting soil under continuous grow-lux lighting. After the first week of plant growth, E1and E2 were placed in a separate trays and given 1.0 and 1.5x the recommended amount of Miracle-Gro formula, respectively. The control was left in tap water and all were kept in 1 cm of solution. Every seven days the plants’ heights were recorded, and the total number of flowers were counted. By the fourth week, the average height of the control plants was 105.7 mm, of the …

Root Hydraulic Conductance In Malosma Laurina Experiencing Severe Dieback In The Santa Monica Mountains, Natalie M. Aguirre 5861995, Avery Davis, Sarah Nelson

Seaver College Research And Scholarly Achievement Symposium

Malosma laurina is a dominant species in coastal chaparral ecosystems The deep root systems of M. laurina provide structural support for the steep Santa Monica Mountains and allow M. laurina to tap into the deep water table. M. laurina dieback is prevalent in coastal exposures of the SMM, presumably due to historic drought predisposing plant tissues to infection by the fungal pathogen Botryosphaeria dothidea. In ecosystems that experience annual dry periods, a high hydraulic conductance in roots is necessary to provide plants with sufficient water. A recent study has examined the effect of Botryosphaeria on the hydraulic conductance of M. …

Detecting Genomic Regions Responsible For Resistance In Arabidopsis, Valeria Cancino, Anjali Iyer-Pascuzzi, Rucha Karve

The Summer Undergraduate Research Fellowship (SURF) Symposium

Ralstonia solanacearum is a soil-borne plant root colonizing pathogen and the casual agent of bacterial wilt (BW) disease. BW leads to severe yield loss in a wide variety of agricultural commodity crops, such as tomato, banana, and pepper. In this study, we look at the plant-pathogen interaction between Ralstonia solanacearum and various ecotypes of Arabidopsis thaliana with the goal of finding resistant ecotypes. To identify resistant ecotypes, seeds are first sterilized and left to soak in the dark. Then the seeds are plated on agar media, transferred to a growth chamber, and allowed to grow for 5 days. On day …

Phosphorylation Regulates Myosin Driven Organelle Movements, Peter Andrew Duden

EURēCA: Exhibition of Undergraduate Research and Creative Achievement

Poster Competition for Undergraduate Research

Extracts Of Trichostema Lanatum Inhibit The Growth Of Gram-Positive Bacteria And An Escherichia Coli Δtolc Mutant Strain, Matthew C. Fleming

Seaver College Research And Scholarly Achievement Symposium

The Chumash Native Americans of Southern California have well-documented traditions of using plants for medicinal purposes. If a specific plant has traditionally been used for the treatment of cuts, wounds and infections, it may contain chemicals with anti-bacterial properties. One plant that fits these criteria is Trichostema lanatum (woolly blue curls). We tested extracts of T. lanatum for their ability to inhibit the growth of a variety of bacteria. Because of the widespread use of antibiotics over the past sixty years bacteria are evolving greater resistance to known antibiotics, but unfortunately the rate of antibiotic discovery has diminished during the …