Biology Commons^™

Documentation Of Atlantic Tarpon (Megalops Atlanticus) Space Use And Move Persistence In The Northern Gulf Of Mexico Facilitated By Angler Advocates, J. Marcus Drymon, Matthew B. Jargowsky, Michael A. Dance, Mitchell Lovell, Crystal L. Hightower, Amanda E. Jefferson, Andrea M. Kroetz, Sean P. Powers

University Faculty and Staff Publications

Atlantic tarpon (Megalops atlanticus, hereafter tarpon) are facing a multitude of stressors and are considered Vulnerable by the IUCN; however, significant gaps remain in our understanding of tarpon space use and movement. From 2018 to 2019, citizen scientists facilitated tagging of 23 tarpon with SPOT tags to examine space use and movement across the northern Gulf of Mexico. Movement-based kernel densities were used to estimate simplified biased random bridge-based utilization distributions and a joint move persistence model was used to estimate a behavioral index for each fish. Tarpon showed consistent east–west movement from the Alabama/Florida border to Louisiana, and utilization …

Demography, Morphometrics, And Stomach Contents Of Common Ravens Examined As A Result Of Controlled Take, Corinne M. Gibble, Kriss K. Neuman, Jessie Beck

Human–Wildlife Interactions

Common ravens (Corvus corax; ravens) are known nest predators that have the ability to negatively impact nesting birds, including imperiled species of seabirds and shorebirds. We conducted systematic necropsies of ravens that were lethally controlled in Monterey Bay, California, USA during 2013–2015, in or near western snowy plover (Charadrius nivosus nivosus) nesting areas, in an effort to better understand body condition, overall health, and diet of individual ravens. Raven predation of snowy plover nests has increased over the years in the Monterey Bay study area, and lethal removal of ravens has been employed to reduce predation. …

Benthic Microalgae Response To A Warming Climate And Shift In Foundational Vegetation Species In A Saltmarsh-Mangrove Ecotone, Gabriela Canas

UNF Graduate Theses and Dissertations

The ecotone in Northeast Florida is experiencing rapid change as mangroves begin to encroach northward into saltmarsh dominated coastal wetlands. This is especially prevalent within the boundaries of the Guana Tolomato Matanzas National Estuarine Research Reserve where studies are attempting to understand the consequences of more mangroves. Although we are beginning to understand some of the implications of this shift in dominant vegetation, the true effects and the accompanying sustained climatic warming effects on the resilience of wetland habitats and their associated communities remains unknown. Primary producers such as benthic microalgae (BMA) are important food sources in both mangrove and …

Ocean Acidification And Fish Respiration: A Study On The Anatomical, Physiological, And Behavioral Adaptations Of Fishes And Their Ability To Cope With Decreasing Seawater Ph, Mark P. Rogers

All HCAS Student Capstones, Theses, and Dissertations

Abstract

Fish stocks across the globe are increasingly being relied upon to supply the ever-growing human population with high quality protein and other nutrients. In addition to fishing pressure, stressors brought on by climate changes, including ocean acidification and hypoxic conditions, have the potential for providing substantial negative impacts on the efficiency of fish respiration, internal acid-base balance, and energy budgets. To meaningfully integrate the potential impacts of ocean acidification on fishes into management practices it is important to study the anatomical, physiological, and behavioral adaptations that enable fish to cope with decreasing seawater pH and how those mechanisms might …

Tunel Apoptotic Cell Detection In Stony Coral Tissue Loss Disease (Sctld): Evaluation Of Potential And Improvements, E. Murphy Mcdonald

All HCAS Student Capstones, Theses, and Dissertations

Stony coral tissue loss disease (SCTLD) is a highly lethal coral disease that has caused a dramatic loss of coral tissue along the Florida Reef Tract and throughout the Wider Caribbean. This study seeks to understand whether programmed cell death (apoptosis) is involved in the pathology of the highly virulent SCTLD tissue loss lesion. Tissues from diseased colonies of Pseudodiploria strigosa collected in 2018 and 2020 were stained using the terminal deoxyribonucleotidyltransferase (TdT) mediated dUTP-biotin nick end labeling (TUNEL) assay to visualize areas of programmed cell death. The archived tissue samples collected in 2018 exhibited a significantly higher degree of …

A Hydrodynamics Assessment Of The Hammerhead Shark Cephalofoil, Matthew K. Gaylord, Eric L. Blades, Glenn Parsons

Faculty and Student Publications

© 2020, The Author(s). Hammerhead sharks are characterized by a conspicuous lateral expansion of the head forming a structure known as a cephalofoil. Two theories regarding the function of this structure suggest that it may increase maneuverability as well as produce dynamic lift similar to a cambered airplane wing. Here we report on a family-wide computational fluid dynamics analysis of all eight hammerhead shark species and three sharks with typical head shape. Models cast of the heads of fresh and museum specimens of hammerhead and typical sharks were used to produce pressure surface maps and lift and drag polar diagrams …

Interactive Effects Of Heat Stress And Pesticides Co-Exposure On Swimming Behavior, Oxidative Stress, Antioxidant Expression, And Redox Status In Common Goldfish (Carassius Auratus), Brittney Danielle Lacy

Theses and Dissertations

Aquatic ecosystems are inundated by environmental pesticides. This study, observed the dose-dependent effects of pesticides cocktail (metalachlor, linuron, isoproturon, tebucanazole, aclonifen, atrazine, pendimethalin, and azinphos-methyl) and elevated temperature (32 °C for 4-week exposure) on morphology of gills and kidneys, and expression of nitrotyrosine protein (NTP), dinitrophenyl protein (DNP), catalase (CAT), superoxidase dismutase (SOD), Na+/K+-ATPase, renin, and apoptosis in tissues of goldfish. Additionally, the effects on the free-swimming behavior were also observed. Histological analysis showed wide-spread damage in tissues at higher temperature and pesticides co-exposure. Immunohistochemical analysis demonstrated alterations in NTP, DNP, CAT and SOD expressions in tissues at higher temperature …

Assessment Of Genetic Diversity In Largetooth Sawfish, Pristis Pristis, Populations Over The 20th Century, Ann Fearing

Master's Theses

The Critically Endangered Largetooth Sawfish, Pristis pristis, experienced global declines in range and abundance over the past century and Australia is now their last stronghold. This research aimed to understand whether these declines have been accompanied by a reduction in levels of genetic diversity. Using P. pristis tissue samples sourced from natural history specimens, three fragments (616-bp, 386-bp, 141-bp) in the mitochondrial DNA (mtDNA) control region were PCR-amplified. At each fragment, significant genetic structure was found in P. pristis overall (Φ_ST=0.946, N=9; 0.813, N=54; 0.771, N=99). The Indo-West Pacific and Atlantic/Eastern Pacific each harbor genetically distinct lineages of …

Global Conservation Status Of Croaker And Drum (Family: Sciaenidae) And Role Of The Maw Trade, Claire E. Gorman

Biological Sciences Theses & Dissertations

Understanding threats and drivers of extinction risk is critical to conserving marine biodiversity. Although marine bony fishes are some of the most diverse and abundant vertebrates in the world, overexploitation is the major threat to these taxa. Species in the family Sciaenidae are important marine resources in many parts of the world, supporting small- and large-scale fisheries for consumption and the international maw (dried swimbladder) trade. Sciaenids exhibit a diverse array of life history characteristics, such as high fecundity, large body size, formation of spawning aggregations, and longevity. Some characteristics increase their susceptibility to anthropogenic stressors. Despite being ecologically and …

Bullseye Snakehead Fish (Channa Marulius) Neurocranium, James A. Moss, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Neurocranium had an estimated length of 11 cm, Bullseye Snakehead (Channa marulius), invasive species collected from South Florida

Shrinking Salmon: Is Climate Change Linked To Animal Body Size?, Monica D. Bacchus

Scientific Communication News

No abstract provided.

[Silk Snapper, Lutjanus Vivanus] Neurocranium, Rachel Taylor, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Silk snapper, Lutjanus vivanus, apart of the Lutjanidae family. A species of red snapper commonly found in the Atlantic and Gulf of Mexico.

Neurocranium prep submission for Dr. Kertstetter, MBIO 3700 Biology of Fishes

Atlantic Mackerel (Scomber Scombrus) Neurocranium, Victor A. Reyes, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Atlantic Mackerel (Scomber scombrus), collected on 12/9/20 by Victor Reyes

Wahoo (Acanthocybium Solandri) Neurocranium, Emily M. Salonia, Mariah Medina, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Neurocranium from 18.8 cm total length (TL) Wahoo (Acanthocybium solandri) collected from Dr. Kerstetter's Fisheries and Avian Ecology Laboratory at Nova Southeastern University Oceanographic Center on 31/8/20 by Emily Salonia.

Queen Snapper(Etelis Oculatus), Katelyn Digirolomo, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Neurocranium from 10.5cm total length(TL) of a Queen Snapper, Etelis oculatus. Collected from Lee Be Fish in Naples Florida on September 12th 2020 by Katelyn DiGirolomo.

Lane Snapper (Lutjanus Synagris) Neurocranium, Jordan Warren, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

No abstract provided.

Blackfin Tuna (Thunnus Atlanticus) Neurocranium, Chase Adam Dejarnett, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Blackfin Tuna (Thunnus atlanticus)

Neurocranium prep for Biology of Fishes coursework at Nova Southeastern University

Milkfish (Chanos Chanos) Neurocranium, Golda Stewart, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Neurocranium from Milkfish (Chanos chanos), collected from Foodtown on 08/09/2020 by Golda Stewart.

Adaptive Divergence, Neutral Panmixia, And Algal Symbiont Population Structure In The Temperate Coral Astrangia Poculata Along The Mid-Atlantic United States, Hannah E. Aichelman, Daniel J. Barshis

Biological Sciences Faculty Publications

Astrangia poculata is a temperate scleractinian coral that exists in facultative symbiosis with the dinoflagellate alga Breviolum psygmophilum across a range spanning the Gulf of Mexico to Cape Cod, Massachusetts. Our previous work on metabolic thermal performance of Virginia (VA) and Rhode Island (RI) populations of A. poculata revealed physiological signatures of cold (RI) and warm (VA) adaptation of these populations to their respective local thermal environments. Here, we used whole-transcriptome sequencing (mRNA-Seq) to evaluate genetic differences and identify potential loci involved in the adaptive signature of VA and RI populations. Sequencing data from 40 A. poculata individuals, including 10 …

Atlantic Salmon (Salmo Salar) Neurocranium, Connor Depriest, Nadia Abeido, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

9.0 cm in length. Neurocranium scan of an Atlantic Salmon (Salmo salar). Collected from Two Bills Seafood on 04/09/20 by Nadia Abeido and Connor Depriest.

Red Lionfish (Pterois Volitans) Neurocranium, Matthew B. Edwards, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Neurocranium from a Lionfish (Pterois volitans) collected from whole foods supermarket on 11/9/2020

A Brain-Infecting Parasite Impacts Host Metabolism Both During Exposure And After Infection Is Established, Lauren E. Nadler, Erik Bengston, Erika J. Eliason, Cameron Hassibi, Siri H. Helland-Riise, Ida B. Johansen, Garfield T. Kwan, Martin Tresguerres, Andrew V. Turner, Kelly L. Weinersmith, Øyvind Øverli, Ryan F. Hechinger

Marine & Environmental Sciences Faculty Datasets

1. Metabolic costs associated with parasites should not be limited to established infections. Even during initial exposure to questing and attacking parasites, hosts can enact behavioural and physiological responses that could also incur metabolic costs. However, few studies have measured these costs directly. Hence, little is known about metabolic costs arising from parasite exposure.
2. Further, no one has yet measured whether and how previous infection history modulates metabolic responses to parasite exposure.
3. Here, using the California killifish (Fundulus parvipinnis) and its brain-infecting parasite (Euhaplorchis californiensis), we quantified how killifish metabolism, behaviour, and osmoregulatory phenotype changed upon acute …

Escolar (Lepidocybium Flavobrunneum) Neurocranium, Meredith M. Pratt, Katerina D. Sawickij, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Neurocranium prep of escolar Lepidocybium flavobrunneum obtained from longlining vessel.

Nest Moisture Content Affects Loggerhead Hatchling Size And Neonate Development, Kelly M. Detmer

Scientific Communication News

No abstract provided.

Reducing Host Dna Contamination In 16s Rrna Gene Surveys Of Anthozoan Microbiomes Using Pna Clamps, Alicia M. Reigel, Sarah M. Owens, Michael E. Hellberg

Faculty Publications

Efforts to study the microbial communities associated with corals can be limited by inefficiencies in the sequencing process due to high levels of host amplification by universal bacterial 16S rRNA gene primers. Here, we develop an inexpensive peptide nucleic acid (PNA) clamp that binds to a target sequence of host DNA during PCR and blocks amplification. We then test the ability of this PNA clamp to mitigate host contamination and increase overall microbial sequence coverage on samples from three coral species: the gorgoniansEunicea flexuosaandGorgonia ventalina,and the scleractinianPorites panamensis. The 20-bp PNA clamp was designed using DNA fromE. flexuosa. Adding the …

Transgenerational Plasticity Causes Differences In Uv-Tolerance Of Intertidal And Subtidal Populations Of The Purple Sea Urchin, Strongylocentrotus Purpuratus, Yareli Alvarez, Nikki L. Adams

Master's Theses

Planktonic larvae of marine organisms are increasingly being exposed and required to respond to a changing physical environment. Adult sea urchins occupy both intertidal and subtidal waters and broadcast spawn gametes into the water column to contend with variable physical conditions. To answer how populations of invertebrates residing at different depths adequately prepare their offspring to cope with different levels of ultraviolet radiation (UVR), we collected adult purple sea urchins, Strongylocentrotus purpuratus, from four sites (two intertidal and two subtidal (~15 m deep)) on the central coast of CA to compare UV tolerance in offspring. Our measurements of UVA …

The Roles Of Host Species, Geographic Scale And Environmental Stressors In Shaping The Composition Of Coral Microbiomes, Alicia Marie Riegel Parker

LSU Doctoral Dissertations

Reef-building corals are long-lived and may take many centuries to adapt, making them especially susceptible to climate change. However, corals host microbial symbionts that can change quickly, potentially speeding acclimation. My dissertation aimed to determine the degree of coevolution and flexibility between corals and their microbiomes among hosts, across space, and in response to stress.

Microbial communities are usually surveyed by sequencing the 16S rRNA gene, however the PCR primers used also amplify coral DNA, thereby limiting prokaryotic read coverage. To mitigate this contamination, I designed a peptide nucleic acid clamp that increased the recovery of bacterial reads by 2-11x …

To Feed Or Not To Feed: Examining The Effects Of Provisioning Tourism On Nurse Sharks In Caye Caulker, Belize, Carlee Jackson

All HCAS Student Capstones, Theses, and Dissertations

Wildlife tourism is increasing in popularity around the world, creating the need to understand alterations in animal behavior and spatial distributions that may occur due to associated anthropogenic disturbances. Nurse sharks (Ginglymostoma cirratum, Bonnaterre 1788) are commonly used for wildlife tourism within the Caye Caulker Marine Reserve in Belize. Shark and Ray Village (SRV) is a site within the reserve where nurse sharks are consistently fed by tour/snorkel boats to create an interactive experience with tourists, termed provisioning tourism. Prior to this experiment, no studies had been conducted in SRV to evaluate the impact of provisioning tourism (tourism …

Fish Community Composition And Structure Near A Freshwater River Diversion In Southeastern Louisiana, Rachel L. Snider

LSU Master's Theses

Gulf of Mexico estuaries, particularly in Louisiana, are among the world’s most productive, with landings of commercially- and recreationally-important species exceeding all other contiguous US states. Coastal wetlands are disappearing at an alarming rate because they have been impounded from Mississippi River water and sediment. Although controversial, one proposed solution is to re-route the Mississippi River through diversions and siphons to supply the freshwater and sediments necessary to rebuild vanishing wetlands, particularly in Barataria Bay and Breton Sound, LA. This strategy is one approach outlined in the Louisiana Coastal Master Plan. This project aimed to describe the composition and structure …

Comparative Study Of Spectral Sensitivity, Irradiance Sensitivity, Spatial Resolution And Temporal Resolution In The Visual Systems Of Aratus Pisonii And Ocypode Quadrata, Ruchao Qian

All HCAS Student Capstones, Theses, and Dissertations

Autrum’s studies (1950, 1958) on terrestrial arthropods first revealed that the visual systems of arthropods reflected their lifestyles and habitats, demonstrating that rapidly moving predatory diurnal species tend to have better temporal resolution than slower moving nocturnal species. In order to test Autrum’s hypothesis that visual adaptions are driven by predator/prey interactions, the visual physiology of a nocturnal fast-moving predatory crab, the Atlantic ghost crab (Ocypode quadrata), and a diurnal herbivorous crab, the mangrove tree crab (Aratus pisonii), was examined and compared. Spectral sensitivity, irradiance sensitivity, and temporal resolution of the crabs were quantified using the …