Biology Commons^™

Temperature Affects Nest Box Occupancy, Nest Success, And Nestling Size In A Southeastern Population Of Eastern Bluebirds (Sialia Sialis), Christopher G. Horacek

Biology Theses

Given the critical role that temperature plays in avian reproductive biology, rising temperatures as a result of global climate change will likely impact reproductive success of many bird populations. Secondary cavity nesting birds, many of which rely on artificial nest boxes to maintain population levels, may be particularly at risk because increased temperatures inside nest boxes can determine whether nest boxes are selected, reduce nest success, and/or negatively affect the growth and survival of offspring. We examined the effect of nest box color on nest box temperature and the influence of nest box temperature, nest box color, entrance orientation, and …

The Effects Of Floral And Social Information On Bumblebee Forager Learning And Memory, Avery Hume Baker

Theses

Bumblebees rely on information gathered from their environment to make the best choices they can when foraging for pollen and nectar. The type of information gathered should influence how a bee learns and remembers it, but other factors such as the size of the bee’s brain may also play a role in the learning and remembering process. While social information learned from other organisms and information gathered directly from flowers can each be used alone to improve both the efficiency with which a bee learns to forage from a flower and how accurately and how long the bee remembers these …

Internal Vertebral Morphology Of Bony Fishes Matches The Mechanical Demands Of Different Environments, Dana Baxter, Karly E. Cohen, Cassandra M. Donatelli, Eric D. Tytell

Engineering Faculty Articles and Research

Fishes have repeatedly evolved characteristic body shapes depending on how close they live to the substrate. Pelagic fishes live in open water and typically have narrow, streamlined body shapes; benthic and demersal fishes live close to the substrate; and demersal fishes often have deeper bodies. These shape differences are often associated with behavioral differences: pelagic fishes swim nearly constantly, demersal fishes tend to maneuver near the substrate, and benthic fishes often lie in wait on the substrate. We hypothesized that these morphological and behavioral differences would be reflected in the mechanical properties of the body, and specifically in vertebral column …

Fire History And Long-Term Carbon Accumulation In Hemi-Boreal Peatlands Companion Dataset, Dominic Uhelski, Evan Kane, Katherine Heckman, Rodney Chimner

Michigan Tech Research Data

This dataset contains peat property data including location, depth, bulk density, organic matter content, and carbon content, infrared spectra, and radiocarbon dates. Peat cores were collected between 2011 and 2019. Analyses were performed between 2018 and 2021. Samples were collected from peatlands in Michigan, Wisconsin, and Minnesota for the purposes of reconstruction of fire history. The data is associated with a yet-to-be-published manuscript to be submitted to Ecosystems.

A README file is included describing the contents of the dataset and all major spreadsheet files contain a Meta worksheet which describes each column of
data.

Combining Isotopic And Genetic Analyses To Quantify Microbial Facilitation Of Recalcitrant Resource Use By Terrestrial And Aquatic Consumers, Alexi Christina Besser

Biology ETDs

Quantifying the flow of energy and nutrients through food webs is foundational to understanding the structure and function of ecosystems. Here, I utilize the stable carbon and nitrogen isotope analysis of individual amino acids to trace the movement of essential amino acids through terrestrial and freshwater food webs in New Mexico, USA. I first explore isotopic patterns among co-occurring terrestrial plants and aquatic algae. I then combine this molecular isotopic approach with 16S and 18S rRNA sequencing to demonstrate the importance of gut microbiota as sources of essential amino acids to wild mammalian hosts. Next, I explore the roles of …

Visual Ecology: Sensing The Social World, Elliott P. Steele

Dartmouth College Ph.D Dissertations

Social animals, and even solitary animals, must at different points in their life actively search for and locate conspecifics within their environment, using one or multiple senses. One sense in particular, vision, can provide some of the most spatially detailed and temporally rapid information about the environment. Yet, the surrounding environment can also severely challenge animals’ abilities to find fellow conspecifics. Furthermore, once an animal successfully locates conspecifics, it must then make key decisions about when and where to enter group formations, decisions which may strongly impact their access to socially-acquired resources. Even after an animal has positioned itself within …

Zebras Of All Stripes Repel Biting Flies At Close Range, Kaia J. Tombak, Andrew S. Gersick, Lily V. Reisinger, Brenda Larison, Daniel I. Rubenstein

Publications and Research

The best-supported hypothesis for why zebras have stripes is that stripes repel biting flies. While this effect is well-established, the mechanism behind it remains elusive. Myriad hypotheses have been suggested, but few experiments have helped narrow the field of possible explanations. In addition, the complex visual features of real zebra pelage and the natural range of stripe widths have been largely left out of experimental designs. In paired-choice field experiments in a Kenyan savannah, we found that hungry Stomoxys flies released in an enclosure strongly preferred to land on uniform tan impala pelts over striped zebra pelts but exhibited no …

Ecology And Evolution Of Social Information Use, Clare T. M. Doherty

Dartmouth College Ph.D Dissertations

Sociality is a strategy many animals employ to cope with their environments, enabling them to survive and reproduce more successfully than would otherwise be possible. When navigating their environments and making decisions, social individuals often use information provided by conspecifics (in the form of social cues and signals), thereby increasing the scope and reliability of the information they can gather. However, social information use may be influenced by many factors, including key differences in context across the physical and social environment. My thesis asks and answers a series of questions regarding the trade-offs in social information use across different contexts, …

Investigating Students' Interpretations Of Ecological Food Webs, Christopher Neil Grissett

USF Tampa Graduate Theses and Dissertations

To better prepare undergraduate students for current and future biological challenges, scientists, educators and researchers in the Vision and Change report recommended five core conceptual areas essential for the improvement of biological literacy, one of which is biological systems. Systems are an identified core concept that may help promote biological literacy. One example of a system that students have difficulty understanding is an ecological food web, which consists of parts or components interacting with one another to perform a given phenomenon. The intricacies of this system tend to confuse students and can produce naïve conceptions that could hinder future learning …

Impacts Of Algal Morphology And Water Flow On Macroalgal Microplastic Capture, Cheyenne M. Adams

Honors College Theses

Microplastic pollution is a major area of concern in marine environments, especially as microplastics enter the food web. This study used pipe cleaners and two lichen species as algal mimics, and Chaetomorpha sp. and Chondrus crispus as model algal species to test the effects of morphology and biomass on microbead and foam capture. This study also utilized two different water flow methods: vortices and waves. Results suggest that water flow, as well as biomass and morphology, play a role in microplastic capture in macroalgae. For all mimics and algal species, except Cladonia lichens, turfs with increased biomass and length showed …

Influence Of Plant Density On Rainfall Interception By Spartina Alterniflora, Hannah K. Longaberger

Honors College Theses

Abstract

Spartina alterniflora is an abundant plant in eastern US and Gulf coast salt marshes; it is important in maintaining a diverse ecosystem. Salt marshes are impacted by rainstorms, which may affect erosion events. This project examined the partitioning of rainfall on single plants of various sizes and on central plants within different canopy densities of S. alterniflora. By calculating the rain stemflow (SF), throughfall (TF), and water adhered to the stem in S. alterniflora, we gained insight to rainfall partitioning with different plant features. My research found no statistically significant relationship between different plant features and SF, TF, …

Evaluation Of Invasive Avifauna Management Strategies In North America, Christopher L. Castillo

Great Plains Graduate Review

Human action has long been the cause of species introductions into new ecosystems (Lodge 1993). Now, these non-native species are a major global problem both ecologically and economically (Bled et al. 2011). Invasive species can alter habitats, decrease biodiversity, damage human settlements, and destroy agriculture (Townsend Peterson and Vieglais 2001; Kumschick and Nentwig 2010). The United States has been particularly affected by invasive introductions, a multitude of which have been avian species. Various management techniques have been implemented in order to control problem bird populations, however often times these methods are used with a ‘trial and error’ strategy. This review …

Alu Dimorphism At The Pv92 Locus Of Chromosome 16 Is In Equilibrium For University Student Population, James M. Brooks, Mackenzie L. Thackston

Journal of the South Carolina Academy of Science

Alu is a retrotransposable element, which refers to its ability to be copied and move from one region of DNA to another DNA region. At the PV92 locus of chromosome 16, Alu is a 300 bp dimorphic insert that can either be present or absent. It does not encode a protein product and has lost the ability to transpose. It is specific to humans, and differences in genotype and allele frequencies between human populations are important tools in understanding evolution. In this research, data was obtained and analyzed from 269 students at Charleston Southern University (CSU) belonging to four different …

Effect Of Bridges On Low Order Stream Fish Assemblages, South Georgia, Usa, David L. Bechler Dr.

Georgia Journal of Science

Anthropogenic impacts such as bridge sites can greatly alter established streambed morphology, associated ecology and flora and fauna. At bridge sites, streams are often channelized approaching the site and deep pools are created at the bridge site causing ecological alterations of faunal assemblages. However, restoring channels and reducing negative construction practices allows the return of natural habitats that are likely to include more sensitive species. Recent conservation studies have suggested that anthropogenic sites may serve as potential habitats for reestablishment of populations following a drought event. This study examined the impact of bridges on fish assemblages at first through fourth …

A Trichy Situation, Kathryn Purple

Cumberland Mountain Naturalist

This issue of the Cumberland Mountain Naturalist discusses Dr Kathryn Purple's research concerning Trichomonosis carried by pigeons.

Filamentous Green Algae (Cladophora Glomerata) In Near Shore Lake Ontario: An Investigation Of Tissue And Water Nutrient Dynamics Through A Period Of Growth And Decomposition., James L. Wagner Jr

Biology Theses

Cladophora glomerata, a filamentous green alga abundant in the Laurentian Great Lakes, has long been considered a nuisance throughout the region. Previous phosphorus (P) abatement practices and legislation successfully reduced the abundance of the algae, but with the introduction of dreissenid mussels, a resurgence has been observed. Though there is substantial literature and modeling of the growth cycle of Cladophora, relatively little research has been dedicated to the decomposition stage of the algae, a period which may contribute to a substantial influx of nutrients to near-shore environmental regions. By first examining a period of in-situ growth within Lake …

Wetlands In Our Backyard: A Review Of Wetland Types In Virginia State Parks, Kirsten Bauer, Benjamin K. Campbell

Virginia Journal of Science

Wetlands constitute a significant component of Virginia’s natural resources and heritage. Though historically they have been discounted—and often denigrated—the exceptional value of wetlands is currently growing in recognition and appreciation. In addition to the value provided by extracted resources and ecological regulation, wetlands also offer people the opportunity to enrich themselves through cultural, educational, and recreational pursuits. The state parks of Virginia provide access to a variety of ecosystems, including a wide array of wetland types. In this review, we document the diversity of wetlands in Virginia State Parks through a typology that groups wetland systems into the three principal …

Population Characteristics Of Selected Small Pelagic Fish Species Along The Tanzanian Coast, Godfrey Fabiani, Leonard J. Chauka, Christopher A. Muhando

Tanzania Journal of Science

Although small pelagic fishing in Tanzania is rising, lack of information on population structure has been a significant concern in its management. This study aimed to determine the species composition, length-weight relationship and length at first maturity of Amblygaster sirm, Encrasicholina heteroloba, Encrasicholina punctifer, Stolephorus commersonii, and Spratelloides gracilis landed at Kilwa Kivinje, Kipumbwi and Shangani along the Tanzanian coast. These landing sites were chosen because of their locations and importance in the small pelagic fishery. Sampling was done monthly from October 2018 to June 2020. The catch composition was site specific such that  E. heteroloba dominated at Kilwa Kivinje …

Brainless But Smart: Investigating Cognitive-Like Behaviors In The Acellular Slime Mold Physarum Polycephalum, Subash Kusum Ray

Dissertations

Evolutionary pressures to improve fitness, have enabled living systems to make adaptive decisions when faced with heterogeneous and changing environmental and physiological conditions. This dissertation investigated the mechanisms of how environmental and physiological factors affect the behaviors of non-neuronal organisms. The acellular slime mold Physarum polycephalum was used as the model organism, which is a macroscopic, unicellular organism, that self-organizes into a network of intersecting tubules. Without using neurons, P. polycephalum can solve labyrinth mazes, build efficient tubule networks, and make adaptive decisions when faced with complicated trade-offs, such as between food quality and risk, speed and accuracy, and exploration …

Arabidopsis Shoot Gravitropism Requires The Mediator Coactivator Complex, Gabriella Newton

Honors Theses

Gravitropism is a plant response to gravity in directing the growth of its organs, such as the root and the stem. Gravity is sensed by statocytes, unique cells that contain starch-filled amyloplasts, which trigger gravitropic growth response by modulating the distribution of growth hormone auxin in the elongation zone of the stem and root. Despite the fact that multiple factors have been identified as key regulators of shoot negative gravitropism, how these factors are regulated at the transcriptional level is largely unknown. In this study, we explore the role of transcriptional machinery in regulating shoot gravity sensing and responses by …

Climate Warming Amplifies The Frequency Of Fish Mass Mortality Events Across North Temperate Lakes, Simon P. Tye, Adam M. Siepielski, Andrew Bray, Andrew L. Rypel, Nicholas B.D. Phelps, Samuel B. Fey

Biological Sciences Faculty Publications and Presentations

Recent increases of animal mass mortality events have coincided with substantial changes in global climate. Yet, tractable approaches that predict how climate change will accentuate occurrences of these ecological catastrophes remain nascent. We compiled one of the most comprehensive datasets of lentic fish mortality events, thermal tolerances of affected families, and 1.2 million air and water temperature profiles across 8891 north temperate lakes in North America. Temperature extremes within and across lakes were strongly associated with the three most frequent cause types (infectious agents, summerkills, winterkills). Thermal tolerances mediated the lethality of direct thermal stress, but mortalities of warm- and …

The Effects Of Prescribed Fire On Ant-Mediated Seed Dispersal In Missouri, Eva M. Colberg

Dissertations

Many aspects of animal-mediated seed dispersal are vulnerable to disturbance, including partner identity and dispersal quantity and quality. This dissertation explores ant-mediated seed dispersal of the herb Sanguinaria canadensis in Missouri Ozark oak forests, where prescribed fire is a common land management tool. In Chapter 1, I test the definition of a keystone seed disperser using absolute and relative contributions of different ant species to the quantity and distance of seed dispersal, based on field observations of S. canadensis seed dispersal. I demonstrate that the ant Aphaenogaster rudis is better described as a numerically dominant rather than keystone seed disperser, …

Developmental Basis Of Evolutionary Lung Loss In Plethodontid Salamanders, Zachary R. Lewis, Ryan R. Kerney, James Hanken

Biology Faculty Publications

One or more members of four living amphibian clades have independently dispensed with pulmonary respiration and lack lungs, but little is known of the developmental basis of lung loss in any taxon. We use morphological, molecular, and experimental approaches to examine the Plethodontidae, a dominant family of salamanders, all of which are lungless as adults. We confirm an early anecdotal report that plethodontids complete early stages of lung morphogenesis: Transient embryonic lung primordia form but regress by apoptosis before hatching. Initiation of pulmonary development coincides with expression of the lung-specification gene Wnt2b in adjacent mesoderm, and the lung rudiment expresses …

Foraging Habitat Selection Of Shrubland Bird Community In Tropical Dry Forest, Anant Deshwal, Steven L. Stephenson, Pooja Panwar, Brett A. Degregorio, Ragupathy Kannan, John D. Willson

Biological Sciences Faculty Publications and Presentations

Habitat loss due to increasing anthropogenic disturbance is the major driver for bird population declines across the globe. Within the Eastern Ghats of India, shrubland bird communities are threatened by shrinking of suitable habitats due to increased anthropogenic disturbance and climate change. The development of an effective habitat management strategy is hampered by the absence of data for this bird community. To address this knowledge gap, we examined foraging sites for 14 shrubland bird species, including three declining species, in three study areas representing the shrubland type of forest community in the Eastern Ghats. We recorded microhabitat features within an …

Behavioral Responses Of A Parasitoid Fly To Rapidly Evolving Host Signals, E. Dale Broder, James H. Gallagher, Aaron W. Wikle, Cameron P. Venable, David M. Zonana, Spencer J. Ingley, Tanner C. Smith, Robin M. Tinghitella

Biological Sciences: Faculty Scholarship

Animals eavesdrop on signals and cues generated by prey, predators, hosts, parasites, competing species, and conspecifics, and the conspicuousness of sexual signals makes them particularly susceptible. Yet, when sexual signals evolve, most attention is paid to impacts on intended receivers (potential mates) rather than fitness consequences for eavesdroppers. Using the rapidly evolving interaction between the Pacific field cricket, Teleogryllus oceanicus, and the parasitoid fly, Ormia ochracea, we asked how parasitoids initially respond to novel changes in host signals. We recently discovered a novel sexual signal, purring song, in Hawaiian populations of T. oceanicus that appears to have evolved because it …

Effects Of Mass Death On Community Structure And Ecosystem Function, Abby Kimpton Jones

Theses and Dissertations

Death and decomposition are natural processes that are generally well-understood. However, large events of death, such as mass mortality events (MMEs) are increasing in frequency and their impacts on the ecosystem are largely unknown. These events may have both bottom-up effects from increased nutrient input as well as top-down effects from loss of an ecological functional group by the affected population. Different functional MMEs may result in different top-down effects, creating cascading effects. In Chapter 1, I test the hypothesis that scavenger and herbivore simulated MMEs generate novel bottom-up and top-down effects. Results indicate that MMEs have a significant effect …

Feeding Ecology Of Highly Migratory Epipelagic Offshore Predators In The Western North Atlantic Ocean, Rachel Lorraine Hildebrand

All HCAS Student Capstones, Theses, and Dissertations

Describing trophic ecology of top predators in marine ecosystems is key to understanding the dynamics of these environments. Feeding ecologies of large predatory fishes were assessed using a combination of stomach content and stable isotope analysis. The target species for this study inhabit the epipelagic ecosystem of the U.S. South Atlantic Bight in the western North Atlantic Ocean. The studied species included five tuna species, five billfish species, Common Dolphinfish, and Wahoo. The goal of this study was to describe and compare the trophic dynamics of each species. From these data, the trophic complex of the offshore pelagic ecosystem was …

Valuing Angling On Reservoirs Using Benefit Transfer, Richard T. Melstrom, Mark A. Kaemingk, Nicholas W. Cole, John C. Whitehead, Christopher J. Chizinski, Kevin L. Pope

Biology Faculty Publications

Economic assessments are rarely applied to inland recreational fisheries for management purposes, especially when compared to fish, habitat, and creel assessments, yet economic assessments can provide critical information for management decisions. We provide a brief overview of economic value, key terminology, and existing economic techniques to address these issues. Benefit transfer, a technique used to measure economic value when an original analysis is not practicable, is conducted by drawing on existing estimates of economic value in similar contexts. We describe an application of benefit transfer to measure the economic value of several recreational fisheries in Nebraska, USA. We examine two …

Legacies Align With Colby’S Acquisition Of Allen And Benner Islands, Bob Keyes

Colby Magazine

The College creates a 500-acre island campus in Muscongus Bay

Regional-Scale Climate-Induced Variation In Ant Physiology And Morphology, Daniel E. Murphy

Biology Theses

The biology of ectotherms such as insects is influenced by ambient thermal conditions. Ants are a ubiquitous and ecologically important group of insects and are well-established as bioindicators of thermal conditions. Ants are sensitive to the thermal extremes that vary with latitude, elevation, and land use, and these thermal gradients influence their spatial and temporal distributions. As a result, ants have evolved physiological and morphological thermal adaptations in response to the thermal environment of their habitats. These adaptations include increased physiological and morphological tolerance for temperature extremes. In Western New York (WNY), temperatures are temporally and spatially heterogeneous, changing with …