Biology Commons^™

From Energy Gradient And Natural Selection To Biodiversity And Stability Of Ecosystems, Bo Deng

Department of Mathematics: Faculty Publications

The purpose of this paper is to incorporate well-established ecological principles into a foodweb model consisting of four trophic levels --- abiotic resources, plants, herbivores, and carnivores. The underlining principles include Kimura's neutral theory of genetic evolution, Liebig's Law of the Minimum for plant growth, Holling's functionals for herbivore foraging and carnivore predation, the One-Life Rule for all organisms, and Lotka-Volterra's model for intraand interspecific competitions. Numerical simulations of the model led to the following statistical findings: (a) particular foodwebs can give contradicting observations on biodiversity and productivity, in particular, all known functional forms -- - positive, negative, sigmoidal, and …

Diversity Of Boletaceae In Peninsular Malaysia., Chan Hong Twu

Student Works (2010-2019)

The Boletaceae (Basidiomycetes) s.l. is a large family of putrescent mushrooms with pores. Members of this well-recognized family form one of the largest, critical fungal components of obligate, symbiotic mycorrhizal communities throughout the temperate and tropical forest ecosystems of the world. They are intimately involved with basic ecosystem processes such as nutrient cycling, nutrient uptake, and decomposition of organic matter. Favourable temperature and humidity conditions in Asian tropical forest support a wide diversity of boletes. However, the seasonality of fruiting, short-lived and often solitary fruiting bodies are major problems encountered when documenting their diversity in tropical forests. The diversity of …

Systematics Of The Genus Ptychadena Boulenger, 1917 (Anura: Ptychadenidae) From Democratic Republic Of The Congo, Katrina Marie Weber

Open Access Theses & Dissertations

This thesis increases the scope of previous phylogenetic analyses that revealed high levels of genetic differentiation within the anuran genus Ptychadena. Herein, I increase sampling of Central African populations of Ptychadena by over six times to examine their relationships to other African populations and to search for cryptic species. This study represents the most comprehensive molecular phylogeny of Ptychadena to date. A total of three mitochondrial (12S, 16S, and cyt b) and two nuclear (RAG1 and rhodopsin) genes were sequenced for 67 specimens of Ptychadena. Maximum parsimony, maximum likelihood, and Bayesian analyses were conducted. These analyses revealed …

New Species In The Genus Monoecocesuts (Cestoda: Anoplocephalidae) From Neotropical Rodents (Caviidae And Sigmodontidae), Terry R. Haverkost, Scott Lyell Gardner

Scott L. Gardner Publications

Anoplocephalid cestodes have a worldwide distribution, but relatively few species are known from South American rodents. By examining the collections of the Harold W. Manter Laboratory of Parasitology and the United States National Parasite Collection, 6 new species of Monoecocestus Beddard, 1914, are described, along with a redescription of Monoecocestus mackiewiczi Schmidt and Martin, 1978, based on the type specimens. The discussion includes commentary about uterine development, an important taxonomic character of the family, the vaginal dilation in immature segments (a character of potential taxonomic importance), and the implication of host usage to the evolutionary history and biogeography of species …

Fisheries Occasional Publication No 75 - Research And Development Plan 2009-10, Department Of Fisheries Western Australia

Fisheries Occasional Publications

The Department of Fisheries R&D plan for 2009/10 outlines the research, monitoring and assessment activities that are specifically directed towards supporting the collection of information that will assist in achieving the objectives of the Fish Resources Management Act (1994) for the coming five year period. This series is updated on an annual basis and should be read in conjunction with the most recent State of Fisheries report where comprehensive analyses of the current status of each of the fisheries and fish habitat resources are described.

The plan specifically focuses on those activities that are currently planned or identified which directly …

Fisheries Occasional Publication No. 67 - Review Of Fisheries Research Report (177), Aldo Steffe, Department Of Fisheries Western Australia

Fisheries Occasional Publications

To provide a review of the Research Report (177) on recreational boat-based fishing in the West Coast Bioregion during 2005/06 including: • The appropriateness of the basic creel survey design used for deriving estimates of catch, effort and catch rates for this type of fishery. • An assessment of whether the assumptions, scope and omissions were suitably identified. • The robustness of the catch estimates, and any conclusions that were included in the report, and total and seasonal recreational catch estimates. These initial terms of reference were expanded to include some discussion on issues raised by (a) the WA Fisheries …

Fisheries Occasional Publication No. 66 - Scientific Review Of The West Coast Demersal Scalefish Fishery, Western Australia, Michael O'Neill, Department Of Fisheries Western Australia

Fisheries Occasional Publications

In December 2008 the Hon Norman Moore MLC, Minister for Fisheries Western Australia appointed two independent experts to assess separately 1) the validity of scientific advice to management and 2) options to manage recreational fishing of west coast demersal scalefish. The following review (1) assesses the validity of research outlining the status of baldchin groper (Choerodon rubescens), West Australian dhufish (Glaucosoma hebraicum) and snapper (Pagrus auratus) as described in the terms of reference. In addition to the terms of reference, an opinion was requested regarding the current appropriateness of the research advice (Wise et al 2007) and the resulting management …

Fisheries Occasional Publication No. 63 - Western Rock Lobster Ecological Risk Assessment, Department Of Fisheries, Western Australia, International Risk Consultants Group Of Companies

Fisheries Occasional Publications

This Ecological Risk Assessment, conducted by IRC Environment (part of International Risk Consultants) and Department of Fisheries WA (FWA) was the result of an initiative by the WA Fishing Industry Council (WAFIC) and (FWA). This report is based on a risk assessment workshop undertaken in February 2001 at the FWA Marine Research Laboratories in Waterman but includes additional background material to justify some of the rankings of the workshop.

The broad intent of the workshop was to provide a register of the potential main ecological risks that arise from the various activities carried out by the western rock lobster (WRL) …

Fisheries Occasional Publication No.057 - Introduced Marine Species In Western Australia, Department Of Fisheries Western Australia

Fisheries Occasional Publications

As the largest State in Australia, Western Australia (WA) has a long and relatively pristine coastline that stretches over 12,500 km, or over 20,700 km if the State’s 3,747 islands are included. The coast ranges over 20 degrees of latitude from the temperate south coast to the northern tip of the tropical Kimberley. There are a wide variety of coastal marine habitats in this vast area. The south coast has extensive white sandy beaches interspersed with granite headlands. A diverse range of nearly 800 species of temperate marine algae, or seaweeds, occurs in the area. With 26 species, the seagrasses …

Water Availability Directly Determines Per Capita Consumption At Two Trophic Levels, Kevin E. Mccluney, John L. Sabo

Biological Sciences Faculty Publications

Community ecology has long focused on energy and nutrients as currencies of species interactions. Evidence from physiological ecology and recent studies suggest that in terrestrial systems, water may influence animal behavior and global patterns of species richness. Despite these observations, water has received little attention as a currency directly influencing animal species interactions. Here, we show that the per capita interaction strength between predatory wolf spiders and their primary prey, field crickets, is strong (0.266) when predators and prey are maintained in ambient dry conditions, but is near zero (0.001) when water is provided ad libitum. Moreover, crickets consume 31-fold …

Reintroduction Of Bison (Bison Bison) On Reservations In South Dakota: Four Case Studies, Trudy M. Ecoffey

Electronic Theses and Dissertations

This research explored and documented issues of sustainability associated with the reintroduction of bison in four different bison herds on Reservations in South Dakota. The four herds were managed by: a tribal family cooperative, an individual tribal member, a tribal university and a tribal fish and wildlife agency. The objectives were to identify management practices associated with the sustainability of bison introduction by American Indians; to explore the role of American Indian culture in the management of bison for sustainability; and to investigate rangeland criteria that could be used to measure sustainability of bison reintroduced by American Indians. This project …

A Redescription Of Three Species Of Monoecocestus (Cestoda: Anoplocephalidae) Including Monoecocestus Threlkeldi Based On New Material, Terry R. Haverkost, Scott Lyell Gardner

Scott L. Gardner Publications

Because we have new and detailed data on species in the genus, herein we redescribe both Monoecocestus macrobursatus and M. minor based on existing museum specimens. We also redescribe M. threlkeldi (Parra, 1952) using material collected in Bolivia. Based on the specimens representing M. thelkeldi, we affirm that Perutaenia Parra, 1953 should remain a junior synonym of Monoecocestus.

Effects Of Habitat Quality On Reproduction In Two Georgia Populations Of Gopherus Polyphemus, Jaqueline W. Entz

College of Graduate Studies: Theses & Dissertations

Author's Abstract: The purpose of this study was to examine differences in maternal investment by examining variation in the habitat structure and reproductive parameters for two populations of Gopherus polyphemus in Southeast GA. Both habitat structure and reproductive parameters for these populations are known from a previous study, thus this study expands upon the previous one and addresses four main questions. (1) Has habitat quality changed in the past ten years within and between population sites? (2) Could a change of habitat have affected female morphology or female reproductive parameters within or between populations? (3) Is female body size shaping …

Fisheries Occasional Publication No.72 - Western Rock Lobster Ecological Effects Of Fishing Research Plan., Rhys Brown

Fisheries Occasional Publications

The commercial West Coast Rock Lobster Fishery (WCRLF) targets the western rock lobster (WRL), Panulirus cygnus, averaging approximately 10,000 tonnes of lobsters each year. Currently approximately 450 to 500 boats operate in the Fishery in waters ranging from 5 m to 200 m depth adjacent to the Western Australian coast and stretching from Cape Leeuwin in the south to Shark Bay in the north. The Fishery is managed by the Department of Fisheries (DoF) in Western Australia, using an input control system designed to constrain exploitation/fishing effort and deliver sustainable catches. The annual value of the catch is estimated at …

Spots Of Adult Male Red-Spotted Newts Are Redder And Brighter Than In Females: Evidence For A Role In Mate Selection?, Andrew K. Davis, Kristine L. Grayson

Biology Faculty Publications

As aquatic adults, eastern red-spotted newts (Notophthalmus v. viridescens) are generally green with two rows of dorsal spots, which vary in number between individuals and range in colour from orange to red. The function of these spots is unknown, but it is possible that they serve as sexual ornamentations and we examined this hypothesis by testing for sexual dimorphism in spot characteristics. We used an image analysis approach that has been used previously with this and other amphibian species to compare the number, size and colour – redness (hue score) and brightness – of spots in 100 male …

Traversing Swanton Road, 1st Ed., James A. West

Academic, Government & Associated Organizational Research Resources

Situated at the northwest end of Santa Cruz County and occupying circa 30 square miles of sharply contrasted terrain, the Scott Creek Watershed concentrates within its geomorphological boundaries, at least 10-12% of California's flora, both native and introduced. Paradoxically, the use/abuse that the watershed has sustained over the past 140+ years, has not necessarily diminished the biodiversity and perhaps parallels the naturally disruptive but biologically energizing processes (fire, flooding, landslides and erosion), which have also been historically documented for the area for +60 years. This is an early edition of an extensive document by James A. West. Please visit the …

Population Structure Of Coyote (Canis Latrans) In The Urban Landscape Of The Cleveland, Ohio Area, Rebecca M. Rashleigh, Robert A. Krebs, Harry Van Keulen

Biological, Geological, and Environmental Faculty Publications

To obtain information on the population structure of coyote (Canis latrans) in an urban setting, a non-invasive genetic sampling technique was applied that consisted of DNA isolation from scat collected around the Cleveland metropolitan area. Muscle tissue was provided from two other coyotes. Amplifying the mitochondrial D-loop or control region produced 33 haplotypes from just 57 coyote sequences and two additional dog sequences from putative coyote-dog hybrids. The mitochondrial DNA genetic diversity in the Cleveland area was high, π 0.02, and composed of six distinct haplotype lineages. In addition, Fst values ranged from 0.07 between collections east and west of …

Roosting Ecology Of Rafinesque's Big-Eared Bat, Corynorhinus Rafinesquii, In Southeastern Mississippi, Austin Webb Trousdale Iii

Dissertations

Rafinesque's big-eared bat, Corynorhinus rafinesquii, is considered rare and/or declining throughout its range. Concrete bridges are potentially important roosts for C. rafinesquii, especially in the Gulf Coastal Plain where the species' natural roosts (caves and large hollow trees) are inherently scarce. Successful efforts to monitor and conserve this species must account for its movements among multiple roosts and determine the duration of its roost use (including bridges) at different temporal scales. Therefore, I investigated roosting ecology of C. rafinesquii from 2000-2005 within a mixed hardwood-pine (Pinus spp.) system in southeastern Mississippi. I conducted surveys of concrete bridges to determine phenological …

What Do Students Have To Say About Ecology And Evolution? Using Podcasting To Apply Integrative Biology Themes Across The Tree Of Life, Amy M. Treonis, Malcolm Hill, Theresa Dolson, Sue Mcginnis, Elizabeth Miles

Biology Faculty Publications

We describe a versatile podcasting assignment that requires students to (i) review primary and secondary literature relating to an assigned organism with the goal of identifying the main features of its ecology and evolution, (ii) prepare an enhanced podcast about their organism, and (iii) critique peer podcasts. The goal of this assignment is for each student to gain a fuller appreciation for and understanding of biological diversity. This assignment will enhance students' research, technology, and communication skills while reinforcing the main themes of integrative biology.

A Journey Through The Scott Creek Watershed, James A. West

Academic, Government & Associated Organizational Research Resources

This PDF contains content captured from: West, James. A Journey Through the Scott Creek Watershed, https://swanton.ucscarboretum.org/index.html. Accessed 9 July 2020. The website was created for the University of California Santa Cruz Arboretum and Botanic Garden. It serves as the beginnings and provides a basic outline of the content within "Traversing Swanton Road," an essay by James A. West. A most recent version of the essay can be found at https://digitalcommons.calpoly.edu/spr_assocres/1/

Plaster Creek Watershed Management Plan, Fishbeck, Thompson, Carr, & Huber, Inc.

Watershed Reports

The quality of Plaster Creek is influenced by many factors, such as human activities within the Plaster Creek Watershed (Watershed), physical and biological characteristics of the natural resources, and the management of those resources. This document provides an overview of these diverse aspects of the Watershed, including detailed information about the sources and causes of watershed pollution, recommendations needed to address impairments, and steps to implement the recommendations.

Is The Amphibian Tree Of Life Really Fatally Flawed?, Darrel R. Frost, Taran Grant, Julian Faivovich, Raoul H. Bain, Alexander Haas, Celio F.B. Haddad, Rafael O. De Sá, Et Al.

Biology Faculty Publications

Wiens (2007, Q. Rev. Biol. 82, 55–56) recently published a severe critique of Frost et al.'s (2006, Bull. Am. Mus. Nat. Hist. 297, 1–370) monographic study of amphibian systematics, concluding that it is “a disaster” and recommending that readers “simply ignore this study”. Beyond the hyperbole, Wiens raised four general objections that he regarded as “fatal flaws”: (1) the sampling design was insufficient for the generic changes made and taxonomic changes were made without including all type species; (2) the nuclear gene most commonly used in amphibian phylogenetics, RAG-1, was not included, nor were the morphological characters that had justified …

Macrofungal Diversity At The Gordon Natural Area, Lauryn Levy, Greg Turner, Gerard Hertel

Gordon Natural Area Biodiversity Studies Documents

No abstract provided.

Out Of South America: Multiple Origins Of Non-Native Apple Snails In Asia, Kenneth Hayes

Department of Biology Faculty Publications

Apple snails (Ampullariidae: Pomacea) native to the New World have become agricultural and environmental pests widely in southern and eastern Asia since their introduction in about 1980. Although their impacts have been extensively documented, considerable confusion persists regarding their identities and geographical origins. Efforts to resolve the confusion have suffered from inadequate taxonomic and geographical sampling from both native and introduced ranges. Using phylogenetic and genealogical methods, we analysed 610–655 bp of cytochrome c oxidase subunit I DNA sequences from 783 apple snails from 164 Asian locations and 57 native South American locations. In Asia, we found four species of …

Description Of The Tadpole Of Leptodactylus Pustulatus Peters, 1870 (Anura: Leptodactylidae), Rafael O. De Sá, Reuber Brandão, Lorena Dall'ara Guimarães

Biology Faculty Publications

The external morphology and oral disc of the tadpole of Leptodactylus pustulatus Peters, 1870, are described and illustrated for Gosner stage 39. The internal oral anatomy was analyzed with SEM at Gosner stage 36 whereas chondrocranial anatomy is reported for Gosner stage 35. The overall characteristics do not depart from those known for the genus Leptodactylus and they particularly agree for those of the melanonotus species group. The labial tooth row formula is 2(2)/3. Observations are presented that suggest that L. pustulatus engages in larval parental care.

Resumo

São descritas a morfologia externa e o disco oral do girino de …

Assessing Causes Of Change In The Freshwater Mussels (Bivalvia: Unionidae) In The Black River, Ohio, Mark S. Lyons, Robert A. Krebs, Jeremy P. Holt, Louie J. Rundo, W. Zawiski

Biological, Geological, and Environmental Faculty Publications

Habitat destruction is believed to be the number one cause of the decline in unionid mussels. Around the world, cities, towns and agriculture alter the structure of watersheds, and the Black River in Ohio may be a typical example. We investigated the diversity and abundance of unionid mussels in this watershed and compared results to urbanization locations, to site-specific appearance of the habitat and to a 1997 fish survey, as host species are another factor important to the distribution of unionid mussels. Although shells were found for 21 species, only 11 of these species were found alive. Seven of the …

Ua66 2007 Student Awards Ceremony, Wku Ogden College Of Science & Engineering

WKU Administration Documents

Program recognizing Ogden College students with brief list of activities for each student.

A Scent-Station Survey Of Medium-Size Mammals On The Callaway Preserve, Harris County, Georgia, Anna-Maria Giacobello

Theses and Dissertations

The objective of this project was to determine the relative abundance of medium- sized mammals on the Callaway Preserve in Harris County, Georgia, using the scent- station technique, to determine species preference in regard to habitat, to compare relative abundance of species in regard to habitat, and to compare habitats in terms of the species present. Thirty-six scent-stations were established on the property and monitored to observe the presence of coyotes, raccoons, armadillos, foxes, opossums, and skunks. Of the total number of visits to the scent-stations, 36.36 % were coyotes, 18.18% were foxes 22.73% were armadillos, and 22.73% were raccoons. …

Coexistence Of The Niche And Neutral Perspectives In Community Ecology, Mathew A. Leibold, Mark A. Mcpeek

Dartmouth Scholarship

The neutral theory for community structure and biodiversity is dependent on the assumption that species are equivalent to each other in all important ecological respects. We explore what this concept of equivalence means in ecological communities, how such species may arise evolutionarily, and how the possibility of ecological equivalents relates to previous ideas about niche differentiation. We also show that the co-occurrence of ecologically similar or equivalent species is not incompatible with niche theory as has been supposed, because niche relations can sometimes favor coexistence of similar species. We argue that both evolutionary and ecological processes operate to promote the …

Proceedings Of The Western Australian Dhufish Workshop 2004, Mark Pagano, Terry Fuller

Fisheries Occasional Publications

The Western Australian Dhufish Workshop 2004 was a joint project between Recfishwest and the Western Australian Department of Fisheries.

The workshop incorporated presentations from the Department of Fisheries, Recfishwest, the Western Australian Fishing Industry Council, Murdoch University and Challenger TAFE to showcase current knowledge relating to the iconic dhufish in Western Australia. The perspectives of a recreational fisher, a commercial wetline operator and a metropolitan charter boat operator were also presented.

Through information sharing and discussion the workshop provided a platform to better understand the fundamental issues that underpin current and future management arrangements for this valuable resource. Both commercial …