Open Access. Powered by Scholars. Published by Universities.®
- Institution
-
- Wright State University (70)
- University of New Mexico (60)
- University of Nebraska - Lincoln (57)
- Old Dominion University (51)
- Department of Primary Industries and Regional Development, Western Australia (38)
-
- California Polytechnic State University, San Luis Obispo (35)
- Bemidji State University (32)
- Ateneo de Manila University (25)
- Bucknell University (23)
- University of Arkansas, Fayetteville (17)
- University of Richmond (14)
- Cal Poly Humboldt (13)
- Georgia Southern University (12)
- University of Dayton (12)
- City University of New York (CUNY) (11)
- Western Kentucky University (11)
- Nova Southeastern University (10)
- Bowling Green State University (9)
- The University of Southern Mississippi (9)
- University of Montana (9)
- Central Washington University (8)
- Cleveland State University (8)
- Wilfrid Laurier University (8)
- Calvin University (7)
- Kennesaw State University (7)
- University of Central Florida (7)
- University of South Florida (7)
- University of Texas at El Paso (7)
- Fort Hays State University (6)
- LSU New Orleans (6)
- Keyword
-
- Biodiversity (57)
- Mammal (44)
- Specimen catalog (42)
- Field notes (37)
- Fieldnotes (36)
-
- Mammalogy (36)
- Catalog (35)
- Collector (35)
- Fieldwork (35)
- Conservation (34)
- Notes (34)
- Botany (32)
- Aquatic ecology (29)
- Freshwater biology (29)
- Limnology (29)
- MN (29)
- Watershed (29)
- Ecology (28)
- Experiments (28)
- New Mexico (25)
- Agua Puerca y las Trancas (24)
- Botanical (24)
- Scott Creek (24)
- Scotts Creek (24)
- Swanton Pacific Ranch (24)
- Minnesota (20)
- Taxonomy (18)
- Aquaculture (17)
- Invasive species (17)
- Climate change (15)
- Publication Year
- Publication
-
- Journal of Bioresource Management (62)
- Biology Faculty Publications (49)
- Division of Mammals - Field Notes and Catalogs (43)
- Biological Sciences Faculty Publications (42)
- Journal of Earth and Life Science (32)
-
- Fisheries Occasional Publications (31)
- Scott L. Gardner Publications (31)
- Academic, Government & Associated Organizational Research Resources (24)
- Faculty Journal Articles (22)
- Virginia Journal of Science (14)
- Cal Poly Humboldt theses and projects (12)
- Biology ETDs (11)
- Five Rivers MetroParks Collaboration Data Archive (11)
- Biology Theses (10)
- Electronic Theses and Dissertations (10)
- Masters Theses & Specialist Projects (9)
- School of Biological Sciences: Faculty Publications (9)
- Dissertations, Theses, and Capstone Projects (8)
- Masters Theses (8)
- Runkle Woods Symposia (8)
- Biological, Geological, and Environmental Faculty Publications (7)
- International Journal of Speleology (7)
- Journal of the Arkansas Academy of Science (7)
- Master's Theses (7)
- All HCAS Student Capstones, Theses, and Dissertations (6)
- College of Graduate Studies: Theses & Dissertations (6)
- Graduate Theses/Dissertations (6)
- Independent Study Project (ISP) Collection (6)
- Killifish Research Review (6)
- LSU New Orleans Theses and Dissertations (6)
- Publication Type
- File Type
Articles 211 - 240 of 866
Full-Text Articles in Biology
Guano Among Bat Species From Two Regions Shows Influence Of Geography And Diet On Bacterial Community, Rahma Ahmed, Thomas Mcelroy, Shannon Whitney, Lydia Moore
Guano Among Bat Species From Two Regions Shows Influence Of Geography And Diet On Bacterial Community, Rahma Ahmed, Thomas Mcelroy, Shannon Whitney, Lydia Moore
Symposium of Student Scholars
Studies of bat guano have shown that the diversity and structure of associated microbial communities can be related to factors such as host phylogeny, life history and reproductive stage, geography, and diet. Many insectivorous bat species in the southeastern U.S. have generalist diets that may shift seasonally to take advantage of abundant prey species or maximize caloric intake. Seasonal shifts in prey availability or consumption should be reflected in a guano microbiome change. We also expected to detect distinct guano microbiomes within species. Within species, distinct microbial communities related to geography, and finally life history and reproductive stage. We compared …
Caribbean Reef-Building Coral-Symbiodiniaceae Network: Identifying Symbioses Critical For System Stability In A Changing Climate, Shaman Patel
All HCAS Student Capstones, Theses, and Dissertations
Increasing global ocean temperatures and frequency of marine heatwaves pose dire consequences for coral reefs. High temperatures often lead to disruptions in coral symbiosis resulting in coral bleaching, increasing the mortality of corals. However, corals can potentially avoid bleaching peril by associating with thermally tolerant symbionts. Here we provide a tool for understanding symbiosis network stability of Caribbean reef-building corals. We created a network of Caribbean hermatypic corals and their associated Symbiodiniaceae phylotypes. A bleaching model was applied to this network to test for resilience and robustness (R50) to thermal stress. It was also layered with trait data for coral …
Callery Pear Allelopathy Study, Michaela J. Woods, Jonathan T. Bauer, Dena Schaeffer, Ryan W. Mcewan
Callery Pear Allelopathy Study, Michaela J. Woods, Jonathan T. Bauer, Dena Schaeffer, Ryan W. Mcewan
Five Rivers MetroParks Collaboration Data Archive
No abstract provided.
Woods Symposium 2022 Program, Wright State University
Woods Symposium 2022 Program, Wright State University
Runkle Woods Symposia
The program for the 5th annual Wright State University Runkle Woods Symposium that took place on November 18, 2022
Evaluation Of Invasive Avifauna Management Strategies In North America, Christopher L. Castillo
Evaluation Of Invasive Avifauna Management Strategies In North America, Christopher L. Castillo
Great Plains Graduate Review
Human action has long been the cause of species introductions into new ecosystems (Lodge 1993). Now, these non-native species are a major global problem both ecologically and economically (Bled et al. 2011). Invasive species can alter habitats, decrease biodiversity, damage human settlements, and destroy agriculture (Townsend Peterson and Vieglais 2001; Kumschick and Nentwig 2010). The United States has been particularly affected by invasive introductions, a multitude of which have been avian species. Various management techniques have been implemented in order to control problem bird populations, however often times these methods are used with a ‘trial and error’ strategy. This review …
2022 Fall Newsletter, Plaster Creek Stewards
2022 Fall Newsletter, Plaster Creek Stewards
Newsletters
Highlights:
Reflections on Our Mission
Fall Event 2022: Future Thriving
Parking Lot Retrofits - A New PCS Strategy
Research Updates
Betty Kliewer Joins the Team
Planting Partners, Interns, and Community Organizations
Support Our Work
Upcoming Event: End-of-Year Celebration
Assessing Changes In Freshwater And Marine Food Web Connections Following Restoration On The Penobscot River, Maine, Using Stable Isotope Analysis, Matthew Brewer Ms
Assessing Changes In Freshwater And Marine Food Web Connections Following Restoration On The Penobscot River, Maine, Using Stable Isotope Analysis, Matthew Brewer Ms
Student Scholarship
Oiadromous fish provide ecological subsidies to freshwater and marine food
webs, connecting both ecosystems. A main goal of the Penobscot River Restoration
Project was to increase connectivity between food webs by removing two mainstem
dams, improving fish passage, and reintroducing river herring through stocking.
Oiadromous fish now reach historic spawning habitat that was not accessible for
centuries. As a result, river herring runs in the Penobscot River increased from
2,336 fish in 2009 to over 3 million fish by 2018. To assess food web connectivity in
the Penobscot watershed, I analyzed stable isotopes from samples collected before
(2009-2010) and after …
Microbial Dimension Of Symbiosis And Dysbiosis In Fungus–Gardening Ants, Blake S. Bringhurst
Microbial Dimension Of Symbiosis And Dysbiosis In Fungus–Gardening Ants, Blake S. Bringhurst
Biology Theses
With symbiotic partners, the means by which a host obtain a symbiont influence the specificity between the host and the symbiont. One such system where symbiont specificity is seen to varying degrees is with higher attine ants. Higher attine ants have symbiotic relationships with the fungal cultivar they grow and the bacterial symbionts in their microbiomes. Among the higher attines, there are two broad groups of fungi. Most ants in the genus Trachymyrmex tend to grow Clade–B fungi, which are a group of undescribed Leucocoprinus species, while leaf–cutting ants in the genera Acromyrmex and Atta tend to grow Clade–A fungi …
The Effects Of Prescribed Fire On Ant-Mediated Seed Dispersal In Missouri, Eva M. Colberg
The Effects Of Prescribed Fire On Ant-Mediated Seed Dispersal In Missouri, Eva M. Colberg
Dissertations
Many aspects of animal-mediated seed dispersal are vulnerable to disturbance, including partner identity and dispersal quantity and quality. This dissertation explores ant-mediated seed dispersal of the herb Sanguinaria canadensis in Missouri Ozark oak forests, where prescribed fire is a common land management tool. In Chapter 1, I test the definition of a keystone seed disperser using absolute and relative contributions of different ant species to the quantity and distance of seed dispersal, based on field observations of S. canadensis seed dispersal. I demonstrate that the ant Aphaenogaster rudis is better described as a numerically dominant rather than keystone seed disperser, …
2022 Spring/Summer Newsletter, Plaster Creek Stewards
2022 Spring/Summer Newsletter, Plaster Creek Stewards
Newsletters
Highlights:
Staff Transitions
Spring Event
Summer Students
Green Team
Reporting Suspicious Pollutants
Spring & Summer School Partners
Watershed Support Grant #2 Awarded
Macroinvertebrate Study Volunteers Needed
Ant Cuticle Microsculpture: Diversity, Classification, Evolution, And Function, John Paul Hellenbrand
Ant Cuticle Microsculpture: Diversity, Classification, Evolution, And Function, John Paul Hellenbrand
Master of Science in Integrative Biology Theses
My thesis covers the intricacies of ant microsculpture diversity, classification, evolution and function. To do this, the thesis is organized into two chapters. The first chapter is a review of ant cuticle and microsculpture diversity as well as including analyses examining the evolution and lability of microsculpture traits. I then review the literature for functional hypotheses related to ant microsculpture. The second chapter explores the relationship of microsculpture and important morphological, physiological, and ecological traits to evaluate support for functional hypotheses.
Critical Corridor: Survey Of Predator Occurrence And Habitat Use In A Threatened Rainforest Protected Area: Comatsa-Sud And Marojejy National Park, Madagascar, Patrick H. Ross
Theses
Madagascar is a nation praised for its floral and faunal endemism and biodiversity. Among the island nation’s most emblematic fauna are its native mammalian carnivores; they are members of the threatened and endemic Eupleridae family. The Corridor of Marojejy – Anjanaharibe Sud – Tsaratanana (COMATSA) is a system of forest protected areas in which three large protected areas are connected in northern Madagascar: Tsaratanana Reserve, Anjanaharibe Sud Special Reserve and Marojejy National Park which is also a UNESCO World Heritage site. COMATSA is a newly protected and currently threatened corridor system that lacks detailed surveys and assessments of its native …
Ontogenetic Niche Shift As A Driver Of Community Structure And Diversity In Non-Avian Dinosaurs, Katlin M. Schroeder
Ontogenetic Niche Shift As A Driver Of Community Structure And Diversity In Non-Avian Dinosaurs, Katlin M. Schroeder
Biology ETDs
As some of the most charismatic megafauna to ever walk the earth, the physiology, morphology, growth and evolution of non-avian theropods has been studied exhaustively, yet little is understood about their roles in ecosystems as juveniles. For carnivorous megatheropods, which exceed 1,000kg in mass yet hatched from eggs of limited size, the likelihood of utilizing different prey through ontogeny was high, simply by proxy of the immense difference in size between adults and juveniles. We found these ontogenetic niche shifts, evidenced by significantly different dental microwear in Tyrannosaurids, to have excluded dinosaurian mesocarnivores from Mesozoic communities. The few dinosaurian mesocarnivores …
Life After Death – Does Carcass Biodiversity Scale With Carcass Body Size?, Troy Warfield
Life After Death – Does Carcass Biodiversity Scale With Carcass Body Size?, Troy Warfield
Biological Sciences Undergraduate Honors Theses
Mammals play a large role in the ecosystems where some, especially large-bodied mammals, act as ecosystem engineers. Mammal carcasses, particularly those of large body mass act as a temporary island of dense nutrients that support other organisms, including other mammal species, for an extended period. Research in this field currently focuses on the link between mammal carcass size and nutrient availably or on non-mammalian size and biodiversity, but little is available on the correlation between mammal carcass size and its influence on ecosystem biodiversity. Here we ask, does the available biomass (i.e., body size) of the carcass affect its role …
Fish Community Assembly At Multiple Spatial Scales In East Texas Streams, Jake R. Swanson
Fish Community Assembly At Multiple Spatial Scales In East Texas Streams, Jake R. Swanson
Electronic Theses and Dissertations
Stream communities are structured by environmental processes that vary in strength across different spatiotemporal scales. Therefore, revealing how stream fish communities are influenced by environmental gradients may clarify how communities respond to disturbance associated with anthropogenic change. I investigated the relative role environmental variables play in the processes that structure the taxonomic and functional diversity of stream fish communities, as well as historical trends in occurrence and local habitat associated with a species of greatest conservation need within east Texas. The results of this study indicate that stream sites with more habitat complexity and stability support a more taxonomically and …
The Effect Of Age On The Mating Call Of The Tungara Frog, Zaizhen Xu
The Effect Of Age On The Mating Call Of The Tungara Frog, Zaizhen Xu
Pacific Undergraduate Research and Creativity Conference (PURCC)
No abstract provided.
Assessing Environmental Factors That Influence Cyanobacterial Blooms In Skinn Lake, Kloe Atwood
Assessing Environmental Factors That Influence Cyanobacterial Blooms In Skinn Lake, Kloe Atwood
Honors Projects
Global lakes are experiencing an increase in toxic algal blooms that can be damaging to the environment. These blooms are caused by cyanobacteria, specifically a species called Planktothrix. Skinn Lake, in Ohio, is a location of a cyanobacterial bloom that is mainly populated by Planktothrix rubescens. This lake was further examined to identify the major toxin-producing bacteria and identify environmental microbes surrounding the bloom. When the data was examined it was found that the microbiomes of the lake greatly differed between the winter (bloom) months and the summer (non-bloom) months. This difference can be viewed within the nutrient analysis from …
Microbial Diversity And Community Structure In Sediments Associated With The Seagrass (Thallassia Testudinum) In Apalachicola Bay, Florida, Rahma Ahmed, Thomas Mcelroy, Troy Mutchler
Microbial Diversity And Community Structure In Sediments Associated With The Seagrass (Thallassia Testudinum) In Apalachicola Bay, Florida, Rahma Ahmed, Thomas Mcelroy, Troy Mutchler
Symposium of Student Scholars
Seagrass is an angiosperm which provides many ecosystem services in coastal areas, such as providing food, shelter and nurseries for many species, and decreasing the impact of waves on shorelines. A global assessment reported that 29% of known seagrass meadows are in a state of decline due to the effects of human activity. Seagrass is commonly found in shallow marine waters where they form meadows containing a microbiome that plays an important role in providing nutrients for seagrass growth, though little is known about the microorganisms within the seagrass meadow sediments. Our project collected sediments from seagrass meadows and adjacent …
Improving Photosynthetic Efficiency In Microalgae Through The Genetic Engineering Of Energy Sensors And Photoreceptors, Taylor L. Britton
Improving Photosynthetic Efficiency In Microalgae Through The Genetic Engineering Of Energy Sensors And Photoreceptors, Taylor L. Britton
Biology ETDs
Through photosynthesis microalgae can convert sunlight, water, and CO2 into chemical energy that can be used to generate carbon neutral biofuels and biomass. With an ever-increasing demand and need for petroleum substitutes it is imperative that we improve the output of industrial-relevant crops such as microalgae. One important way of improving output in algae is by understanding the roles that stress and energy conversion is regulated in these organisms. Photosynthetic organisms fundamentally depend on light- and sugar-driven metabolic and signaling networks, which integrate environmental cues to govern and sustain growth and survival. SnRKs (SNF1-related protein kinases) and the photoreceptor …
Leaf Phenology Of Callery Pear: Frost Damage, Margaret E. Maloney, Abby Hay, Eric B. Borth, Ryan W. Mcewan
Leaf Phenology Of Callery Pear: Frost Damage, Margaret E. Maloney, Abby Hay, Eric B. Borth, Ryan W. Mcewan
Five Rivers MetroParks Collaboration Data Archive
This dataset is one of three affiliated with the paper "Leaf phenology and freeze tolerance of the invasive tree Pyrus calleryana Roseaceae) and potential native competitors."
The other two datasets are:
Leaf Phenology Of Callery Pear: Spring, Margaret E. Maloney, Abby Hay, Eric B. Borth, Ryan W. Mcewan
Leaf Phenology Of Callery Pear: Spring, Margaret E. Maloney, Abby Hay, Eric B. Borth, Ryan W. Mcewan
Five Rivers MetroParks Collaboration Data Archive
This dataset is one of three affiliated with the paper "Leaf phenology and freeze tolerance of the invasive tree Pyrus calleryana Roseaceae) and potential native competitors."
The other two datasets are:
Leaf Phenology Of Callery Pear: Fall, Margaret E. Maloney, Abby Hay, Eric B. Borth, Ryan W. Mcewan
Leaf Phenology Of Callery Pear: Fall, Margaret E. Maloney, Abby Hay, Eric B. Borth, Ryan W. Mcewan
Five Rivers MetroParks Collaboration Data Archive
This dataset is one of three affiliated with the paper "Leaf phenology and freeze tolerance of the invasive tree Pyrus calleryana Roseaceae) and potential native competitors."
The other two datasets are:
A Natural Experiment Identifies An Impending Ecological Trap For A Neotropical Amphibian In Response To Extreme Weather Events, Morgan A. Clark, William M. Ota, Sierra J. Smith, Brett K. Muramoto, Summer Ngo, Gabriella E. Chan, Maxwell A. Kenyon, Matthew C. Sturtevant, Max G. Diamond, Gary M. Bucciarelli, Lee B. Kats
A Natural Experiment Identifies An Impending Ecological Trap For A Neotropical Amphibian In Response To Extreme Weather Events, Morgan A. Clark, William M. Ota, Sierra J. Smith, Brett K. Muramoto, Summer Ngo, Gabriella E. Chan, Maxwell A. Kenyon, Matthew C. Sturtevant, Max G. Diamond, Gary M. Bucciarelli, Lee B. Kats
All Faculty Open Access Publications
Extreme weather events are predicted to increase as a result of climate change, yet amphibian responses to extreme disturbance events remain understudied, especially in the Neotropics. Recently, an unprecedented windstorm within a protected Costa Rican rainforest opened large light gaps in sites where we have studied behavioral responses of diurnal strawberry poison frogs (Oophaga pumilio) to ultraviolet radiation for nearly two decades. Previous studies demonstrate that O. pumilio selects and defends perches where ultraviolet radiation (UV-B) is relatively low, likely because of the lethal and sublethal effects of UV-B. In this natural experiment, we quantified disturbance to O. pumilio habitat, …
Human Adaptation And Morphological Variation: Expanding Diversity In Anatomy Curriculum, Jordan Cass, Cooker Storm
Human Adaptation And Morphological Variation: Expanding Diversity In Anatomy Curriculum, Jordan Cass, Cooker Storm
Seaver College Research And Scholarly Achievement Symposium
Introduction: The recent upturn in our nation’s socio-political conversation has fueled interest in ensuring that college curricula is diverse and inclusive. Because human anatomy is ubiquitous across colleges, it may be a valuable avenue to purposefully incorporate topics of diversity in a way that positively impacts our socio-cultural relationships. Providing students with a scientific understanding of our visible differences may mitigate subconscious bias when we see others who have different features. Purpose: We investigated the biogeographical factors that contribute to the morphological variability of the face, hair, and body size; with the secondary aim of developing diverse and …
Genetic Variation Of The Mitochondrial Dna Control Region Across Plains Bison Herds In Usa And Canada, Gaimi Davies, Blake Mccann, Lee Jones, Stefano Liccioli, Maria Cecilia Penedo, Igor V. Ovtchinnikov
Genetic Variation Of The Mitochondrial Dna Control Region Across Plains Bison Herds In Usa And Canada, Gaimi Davies, Blake Mccann, Lee Jones, Stefano Liccioli, Maria Cecilia Penedo, Igor V. Ovtchinnikov
Biology Faculty Publications
Once numbering in the tens of millions, bison (Bison bison) have faced a broad range of challenges over the past century, including genetic impacts from the population bottleneck in the 1800s, and significant loss and fragmentation of habitat resulting in little opportunity for population growth on remaining small, geographically isolated reserves. To identify best practices for bison stewardship against this backdrop, managers must understand the genetic composition of existing conservation herds. This study characterized 14 plains bison (Bison bison bison) herds managed by the U.S. Department of Interior and Parks Canada Agency based on complete mtDNA …
Introducing Xanthoria Parietina: Invasive, Naturalized, Or Opportunistic?, Mikele Baugh, Steve Leavitt
Introducing Xanthoria Parietina: Invasive, Naturalized, Or Opportunistic?, Mikele Baugh, Steve Leavitt
Library/Life Sciences Undergraduate Poster Competition 2022
Lichens are one of the world’s ubiquitous group of organisms. They have been documented from frigid tundras to arid deserts. While some species are known to be particularly hardy and flexible in their habitats, many species are linked to specific growing conditions. As the global climate changes, the geographical range for different growing conditions shifts. Economic trade and human travel provide new opportunities for species to access new locations that are beginning to develop habitable conditions. Xanthoria parietina has been observed in the Great Basin (a region outside of its typical coastal distribution) found in newly built horticultural landscapes. Individuals …
Reviewing The Effects Of Human-Induced Limb Damage In Crabs, Jacob B. Spencer, Blaine D. Griffen
Reviewing The Effects Of Human-Induced Limb Damage In Crabs, Jacob B. Spencer, Blaine D. Griffen
Library/Life Sciences Undergraduate Poster Competition 2022
Limb damage in crabs comes in various forms, each with unique consequences. Brachyuran crabs shed limbs as a defensive reflex, with natural breakage occurring along a plane, otherwise known as autotomy. In addition to autotomy, crabs commonly lose limbs due to fishing practices such as declawing. In many areas, taking the limbs and releasing the crab is a common practice. The logic is that the populations won’t decline if the crab is put back. Other practices such as nicking, or cutting the main claw tendon, are used to restrict claw movement. Various effects of these fishery practices have been documented …
Morphological Changes Of The Asian Shore Crab Across Latitudes, Ainslee Mcmullin, Blaine D. Griffen
Morphological Changes Of The Asian Shore Crab Across Latitudes, Ainslee Mcmullin, Blaine D. Griffen
Library/Life Sciences Undergraduate Poster Competition 2022
The Asian shore crab, Hemigrapsus sanguineus , is an invasive species that has rapidly spread across the Eastern United States coastline. First observed in North America in 1988, its range currently extends from Maine to North Carolina. H. sanguineus has adapted very well to this region and has displaced several native species as the dominant crab in rocky intertidal habitats. Although the Asian shore crab’s biology and interactions with native species has been well studied, larger scale impacts (economic, potential further spread, community ecology, etc.) are under researched. We collected specimen samples of H. sanguineus throughout its entire East coast …
Data From Callery Pear Prairie Survey, Michaela J. Woods, Grace Dietsch, Ryan W. Mcewan
Data From Callery Pear Prairie Survey, Michaela J. Woods, Grace Dietsch, Ryan W. Mcewan
Five Rivers MetroParks Collaboration Data Archive
This dataset was curated following the examination of two prairies invaded by Callery pear, and two that were not invaded. We assessed soil nutrients and chemistry, plant cover, and proximity to different land uses to see if they impacted Callery pear abundance, presence/absence or cover.
Phylogenomic Discordance Suggests Polytomies Along The Backbone Of The Large Genus Solanum, Edeline Gagnon, Rebeccca Hilgenhof, Andrés Orejuela, Angela J. Mcdonnell, Gaurav Sablok, Xavier Aubriot, Leandro Giacomin, Yuri Gouvêa, Thamyris Bragionis, João Renato Stehmann, Lynn Bohs, Steven Dodsworth, Christopher T. Martine, Péter Poczai, Sandra Knapp, Tiina Särkinen
Phylogenomic Discordance Suggests Polytomies Along The Backbone Of The Large Genus Solanum, Edeline Gagnon, Rebeccca Hilgenhof, Andrés Orejuela, Angela J. Mcdonnell, Gaurav Sablok, Xavier Aubriot, Leandro Giacomin, Yuri Gouvêa, Thamyris Bragionis, João Renato Stehmann, Lynn Bohs, Steven Dodsworth, Christopher T. Martine, Péter Poczai, Sandra Knapp, Tiina Särkinen
Faculty Journal Articles
Premise of the study
Evolutionary studies require solid phylogenetic frameworks, but increased volumes of phylogenomic data have revealed incongruent topologies among gene trees in many organisms both between and within genomes. Some of these incongruences indicate polytomies that may remain impossible to resolve. Here we investigate the degree of gene-tree discordance in Solanum, one of the largest flowering plant genera that includes the cultivated potato, tomato, and eggplant, as well as 24 minor crop plants.
Methods
A densely sampled species-level phylogeny of Solanum is built using unpublished and publicly available Sanger sequences comprising 60% of all accepted species (742 spp.) …