Biology Commons^™

Of Course, Humans Are Not Unique!, Bernard Wallner

Animal Sentience

This commentary focuses on the question of the uniqueness of humans in comparison to other species and on the false assumption that single arguments support logical conclusions. Comparative analysis of genetic data in humans and nonhuman primates regarding the dopaminergic system of the subcortical mesolimbic reward system highlights homologous traits shared and modified by the process of evolution. Such an analytical approach is more relevant than claims of uniqueness.

Movement Ecology Of A Cryptic Ambush Predator: Integrating Radio Telemetry And Tri-Axial Accelerometry To Evaluate Spatial Strategies And Activity Patterns By Western Diamond-Backed Rattlesnakes (Crotalus Atrox), Dominic L. Desantis

Open Access Theses & Dissertations

An animal's decision to move from one location to another within its environment is determined by a complex blend of internal and external factors. Teasing apart the relative roles of specific variables in this web of interacting mechanisms has been a long-standing challenge in animal movement ecology. Historically, this problem was viewed as a sort of black box for which a myriad of methodological limitations precluded rigorous study. Recently, a diversity of animal-borne transmitters and dataloggers (i.e., bio-loggers) have circumvented many of these traditional limitations and transformed field studies of animal movement, behavior, and physiology - in some cases, allowing …

Rapid Identification Of Phospholipase A2 Transcripts From Snake Venoms, Ying Jia, Pablo Olvera, Frida Rangel, Bianca Mendez, Samir Reddy

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

Phospholipase A₂ (PLA₂) is a major component in snake venoms and it is found in many different isoforms. To identify transcripts encoding different PLA₂ isoforms, we developed a simple, rapid procedure. Total RNA was extracted from the venoms of three cottonmouth snakes and two diamondback rattlesnakes, and further reverse-transcribed into complementary DNA (cDNA). Using one pair of cottonmouth PLA₂-specific primers and Reverse Transcription Polymerase Chain Reaction (RT-PCR) technique, we identified 27 unique full-length PLA₂ transcripts, including nine sequences identical to the previously documented ones in the database and one novel GIII-like PLA_{2 …}

An Acoustic Monitoring Method For Assessing River Dolphin Presence And Changes In The Context Of Anthropogenic Development, Charles A. Muirhead

Graduate Masters Theses

Populations of river dolphins throughout Asia are in decline as a direct result of intensified anthropogenic activity along river systems. Water development projects, land use change, contamination, and intensified fishing practices are known factors contributing to the probable extinction of the Yangtze river dolphin (Lipotes vexillifer) and declining populations of the South Asian river dolphin (Platanista gangetica spp.), Irrawady dolphin (Orcaella brevirostris), and finless porpoise (Neophocaena a. asiaeorientalis). Although not yet as extensive, river system development in South America is following a similar path as that of Asia, with impacts on dolphin species likely to follow. Currently, the Amazon river …

Legacy Habitat Suitability Of Eastern Oysters (Crassostrea Virginica) In Louisiana: A Prelude To Mississippi River Delta Freshwater Diversions, Tasia Mv Denapolis

LSU New Orleans Theses and Dissertations

The Louisiana oyster industry is greatly impacted by freshwater and sediment diversions that are part of the effort to restore the state’s coastline. A habitat suitability index (HSI) proposes species-habitat relationships that can be instrumental in creating impact assessments and suitability predictions for management as new diversions are implemented. An oyster (Crassostrea virginica) HSI was developed using three variables crucial to oyster sustainability: average annual salinity, minimum monthly salinity, and average salinity during the spawning season. These Legacy HSI visualizations show annual fluctuations in the distribution of zones suitable for oyster cultivation prior to proposed diversions in Pontchartrain …

Employing Natural History Collections In The Aid Of Conservation: Streamlining An Approach To Model Species Distributions En Masse For The Preservation Of Biodiversity, Alice Fornari

Master's Projects and Capstones

Using species distribution models (SDMs) in Natural History Collections (NHCs) can influence how humans implement conservation changes in flora and fauna communities and ecosystems. Through the use of legacy data (old NHCs and their associated locality/collection information), data correction (background data or pseudo absences added to presence-only data), and the SDM software, Maxent (and its associated geographic information systems or GIS projected models), it has been shown that it is feasible to create a low budget protocol/setup to project the past, present and future of species population changes. This has been done in the past few decades as more collections …

Census Study Of Ducks, Swans And Geese From High-Altitude Wetlands Of Pakistan, Fakhra Nazir, Inayatullah Malik, Safdar Ali Shah

Journal of Bioresource Management

The family Anatidae consists of aquatic birds such as ducks, geese and swans of varied sizes that belong to the order Anseriformes (Carboneras, 1992). The Anatidae comprise of approximately 148 species (Johnsgard, 2010). This family is commonly found across the globe except for in Antarctica. Data on ecology and population of these water birds was taken from protected areas of Pir Lasura National Park (June-July 2009), Banjosa Game Reserve (May-June 2009), Dhirkot National Park (February 2008), Pir Chanasi National park (April-May 2010) and Tolipir National Park (April-May 2008). Only four species from the family Anatidae were found in the study …

Checklist Of Zooplanktons In Different Rivers Of Bajwat Area, Zahid Bhatti, Muhammad Asif Gondal, Asad Ghufran, Andleeb Batool

Journal of Bioresource Management

Zooplanktons are important fish and waterfowl food. Limnological studies of Marala Wetlands, a complex created by three rivers, i.e., Jammu Tawi, Chenab and Manawar Tawi, entering Bajwat area located 25 km from North of Sialkot city from state of Jammu and Kashmir, were carried out between October, 2000 to September 2001. This survey was carried out to create a checklist of zooplanktons existing in the study site which would help in future studies relating to aquatic biodiversity and ecological studies of wetlands. A minimum of 25 species of zooplanktons were present in the wetland area, which can be included into …

The Mayfly Newsletter, Donna J. Giberson

The Mayfly Newsletter

The Mayfly Newsletter is the official newsletter of the Permanent Committee of the International Conferences on Ephemeroptera.

A Critical Analysis Of Bumblefoot: Care And Preventative Measures In Captive Penguins, Jamie A. Wolanin

Honors Projects

Bumblefoot is a progressive and sometimes deadly infection that afflicts penguins living in human care. The most prominent cause of the disease is the extended amount of time that captive penguins spend standing in comparison to their pelagic and wild counterparts. For years, facilities have treated bumblefoot with surgery and antibiotics. However, this approach is palliative rather than preventative and has become problematic as bacteria develop stronger resistance to antibiotics. To address the behavioral abnormalities underlying the onset of bumblefoot, zoos and aquariums should utilize environmental enrichment. Many forms of environmental enrichment, including the relationship penguins have with their keepers …

Effects Of Parafluvial Flows On Interstitial Ammonia And Freshwater Mussels In The Buffalo National River, David Alan Johnson

Graduate Theses/Dissertations

Freshwater mussel populations and distributions have declined over the past several decades in the Buffalo River, Arkansas. Among many possible causes, this study tested the hypothesis that ammonia concentrations in parafluvial flows through gravel bars might be high enough to impair the survival and growth of juvenile mussels. Ammonia, pH, temperature, and dissolved oxygen were measured in interstitial and water column samples from gravel bars to test for possible longitudinal gradients. Samples were taken along 3 large bars at locations within the Buffalo National River, at approximate bi-weekly intervals between June and September of 2010. Water sample ammonia concentrations were …

A Phylogenetic Analysis Of Leptogorgia Virgulata And Leptogorgia Hebes In The Northwestern Gulf Of Mexico, Samantha Silvestri

Theses and Dissertations

The use of genetics in recent years has brought to light the need to reevaluate the classification of many gorgonian octocorals. In 2017, Poliseno et al. conducted a comprehensive, phylogenetic study of the genus Leptogorgia and found that it, too, was in need of taxonomic revision. To expand on their study, 25 samples representing two Leptogorgia species—L virgulata and L. hebes —from the northwestern Gulf of Mexico (GOM) were examined. Ten novel, complete mitochondrial genomes were sequenced using Next Generation sequencing and 24 novel mtMutS sequences were obtained from both species. The phylogenies reconstructed from these sequences indicate the …

Midguts, Microbes, And Mosquitoes: An Analysis Of The Microbiomes Of Aedes Aegypti And Aedes Albopictus, Flor Alicia Martinez

Theses and Dissertations

Experiment 1: Mosquito microbiomes are influenced by the environment and diets of mosquitoes. There is great variability within and among mosquito populations with few microbe inhabitants being well established among mosquitoes of similar species and environments. By understanding the potential variation in midgut microbiomes in lab and wild populations, we may assess the effect that microbiomes have on vector competency.

Experiment 2: Mosquito midgut microbes are essential for development and may influence the vector competency. Native and non-native strains of the midgut inhabitant, Cedecea, were introduced to laboratory colonies of Aedes aegypti and Aedes albopictus mosquitoes to help elucidate …

Effects Of Invasive Nilgai Antelope (Boselaphus Tragocamelus ) Browsing On Black Mangrove (Avicennia Germinans) In South Texas: A Study On Microenvironmental, Physiological, Structural, And Reproductive Parameters, Tianna Picquet

Theses and Dissertations

Mangroves are important for coastal systems because they provide habitat for fish and bird species, mitigate erosion, and create an area for carbon sequestration. Along the Gulf of Mexico, at the southern tip of Texas, recent observations have shown that A. germinans stands (the dominant species in Texas) are being browsed on by invasive nilgai antelope (Boselaphus tragocamelus). The antelope were introduce to the south Texas region via King Ranch in the 1930’s and have since significantly increased in population and distribution. Previously thought to be grazers, B. tragocamelus were captured on camera utilizing A. germinans as a …

The Study Of Alcoholic Liver Diseases, Seun Emmanuel Owoseni

Electronic Theses and Dissertations

Excessive alcohol consumption is the primary contributing factor in the development of alcoholic liver diseases (ALD). Nicotine contained in tobacco is a major addictive alkaloid, which enhances the effects of ALDs. The major enzyme involved in nicotine metabolism is cytochrome P450 2A5 (CYP2A5) which is produced in the liver. Alcohol can stimulate the CYP2A5 enzyme. We utilized cyp2a5-/- knockout mice in this research to examine the effects of CYP2A5.

The cyp2a5-/- mice and wild-type (WT) mice were fed liquid ethanol diet with or without nicotine to induce ALD. Nicotine enhancing effects on ALD were observed in WT mice but not …

Examining Patterns In Nest Predation Using Artificial Nests, Victoria L. Simonsen

School of Natural Resources: Dissertations, Theses, and Student Research

The use of artificial nests to study the predation of avian nests has faced disregard by ecologists due to inconsistencies found between the survival rates of real and artificial nests across studies and reviews. The negative perception of artificial nests providing an inconsistent assessment of survival has thus fostered the perception that artificial nests are a secondary option to be used to overcome logistical hurdles associated with achieving sufficient sample sizes in systems where study species are rare or elusive, or as merely a preliminary method to study predation across gradients. We argue that the greatest mistake ecologists have made …

Clethrionomys Gapperi, Roger W. Barbour

Roger W. Barbour Slide Collection

Clethrionomys gapperi

Clethrionomys Gapperi, Roger W. Barbour

Roger W. Barbour Slide Collection

Clethrionomys gapperi

Microtus Chrotorrhinus, Roger W. Barbour

Roger W. Barbour Slide Collection

Microtus chrotorrhinus

Microtus Longicaudus, Roger W. Barbour

Roger W. Barbour Slide Collection

Microtus longicaudus

Microtus Longicaudus, Roger W. Barbour

Roger W. Barbour Slide Collection

Microtus longicaudus

Microtus Montanus, Roger W. Barbour

Roger W. Barbour Slide Collection

Microtus montanus

Microtus Ochrogaster, Roger W. Barbour

Roger W. Barbour Slide Collection

Microtus ochrogaster

Microtus Pennsylvanicus Pullatus, Roger W. Barbour

Roger W. Barbour Slide Collection

Microtus pennsylvanicus pullatus

Microtus Pennsylvanicus Pullatus, Roger W. Barbour

Roger W. Barbour Slide Collection

Microtus pennsylvanicus pullatus

Pitymys Pinetorum, Roger W. Barbour

Roger W. Barbour Slide Collection

Pitymys pinetorum

Neotoma Albigula, Roger W. Barbour

Roger W. Barbour Slide Collection

Neotoma albigula

Neotoma Cinera, Roger W. Barbour

Roger W. Barbour Slide Collection

Neotoma cinera

Neotoma Cinera, Roger W. Barbour

Roger W. Barbour Slide Collection

Neotoma cinera

Neotoma Floridana, Roger W. Barbour

Roger W. Barbour Slide Collection

Neotoma floridana