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Bioinformatics Commons

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Full-Text Articles in Bioinformatics

Mmappr2: An Improved Bioinformatics Approach To Find Novel Genes, Aiden Cardall, Jonathon T. Hill, Kyle Johnsen, Connor Ward, Maliha Tasnim, Jared Taylor Mar 2024

Mmappr2: An Improved Bioinformatics Approach To Find Novel Genes, Aiden Cardall, Jonathon T. Hill, Kyle Johnsen, Connor Ward, Maliha Tasnim, Jared Taylor

Library/Life Sciences Undergraduate Poster Competition 2024

Introduction

• New genes are commonly found by randomly inducing mutations in model organisms.

• Mapping the mutations to the genome to find novel genes is difficult, time-consuming, and expensive.

• We created a bioinformatics program, MMAPPR, to automate this process.

• Here, we introduce a new algorithm, MMAPPR2, which requires little to no bioinformatics knowledge to use.

• MMAPPR2 makes several improvements that allow it to identify genes more rapidly and precisely.

• MMAPPR2 will aid the rapid identification of genes in a wide range of species and developmental systems.


Determining The Role Of Noncoding Insertion And Deletion Mutations In Lung Cancer, Zachary Everton, Matthew H. Bailey Mar 2024

Determining The Role Of Noncoding Insertion And Deletion Mutations In Lung Cancer, Zachary Everton, Matthew H. Bailey

Library/Life Sciences Undergraduate Poster Competition 2024

Background

● Cancer is a disease in which cells grow and divide at an uncontrolled rate and cause damage to surrounding tissue and is caused by mutations in the cells’ DNA.

● Though some cancer-causing mutations are inherited from parents, most cancer-causing mutations emerge over the course of a person’s life and are localized to the tumor. These localized mutations are also known as somatic mutations.

● The human genome is over 6.27 billion base pairs long and cannot be read from end to end; instead it is read in small pieces that are aligned to best-matching sequences in the …