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Full-Text Articles in Biochemistry

Interplay Of Hydrogen Bonds And N→Π* Interactions In Proteins, Gail J. Bartlett, Robert W. Newberry, Brett Vanveller, Ronald T. Raines, Derek N. Woolfson Nov 2013

Interplay Of Hydrogen Bonds And N→Π* Interactions In Proteins, Gail J. Bartlett, Robert W. Newberry, Brett Vanveller, Ronald T. Raines, Derek N. Woolfson

Brett VanVeller

Protein structures are stabilized by multiple weak interactions, including the hydrophobic effect, hydrogen bonds, electrostatic effects, and van der Waals interactions. Among these interactions, the hydrogen bond is distinct in having its origins in electron delocalization. Recently, another type of electron delocalization, the n→π* interaction between carbonyl groups, has been shown to play a role in stabilizing protein structure. Here we examine the interplay between hydrogen bonding and n→π* interactions. To address this issue, we used data available from high-resolution protein crystal structures to interrogate asparagine side-chain oxygen atoms that are both acceptors of a hydrogen bond and donors of …


Sinorhizobium Meliloti Nia Is A P(1b-5)-Atpase Expressed In The Nodule During Plant Symbiosis And Is Involved In Ni And Fe Transport., José Argüello, Eliza Zielazinski, Manuel Gonzalez-Guerrero, Poorna Subramanian, Timothy Stemmler, Amy Rosenzweig Dec 2012

Sinorhizobium Meliloti Nia Is A P(1b-5)-Atpase Expressed In The Nodule During Plant Symbiosis And Is Involved In Ni And Fe Transport., José Argüello, Eliza Zielazinski, Manuel Gonzalez-Guerrero, Poorna Subramanian, Timothy Stemmler, Amy Rosenzweig

José M. Argüello

The P1B-ATPases are a ubiquitous family of metal transporters. These transporters are classified into subfamilies on the basis of substrate specificity, which is conferred by conserved amino acids in the last three transmembrane domains. Five subfamilies have been identified to date, and representative members of four (P1B-1 to P1B-4) have been studied. The fifth family (P1B-5), of which some members contain a C-terminal hemerythrin (Hr) domain, is less well characterized. The S. meliloti Sma1163 gene encodes for a P1B-5-ATPase, denoted Nia (Nickel-iron ATPase), that is induced by exogenous Fe(2+) and Ni(2+). The nia mutant accumulates nickel and iron, suggesting a …