Zoology Commons^™

Natural Animal Food Preference Of Chinese Mole Shrew (Anourosorex Squamipes) From An Urban Area: A Laboratory Study, Yun-Chun Ye, Yi Luo, Zhao-Min Zhou

Turkish Journal of Zoology

Most wild animals are urban avoiders, but some others become adapters or exploiters successfully living in urban areas. Often, the latter is assumed to be attracted into cities by readily accessible and digestive anthropogenic food resources. Here, we quantified food preferences of sixteen (eight females and eight males) Chinese mole shrews (Anourosorex squamipes) captured from an urban area for "cafeteria tests" in laboratory. Shrews were presented with twelve foods allocated into three sets (natural animal, natural plant, and anthropogenic food). Once the most two highly consumed food items from each set were determined, six items were pooled together to form …

Diet Analysis Of Kitti’S Hog-Nosed Bat Craseonycteris Thonglongyai Hill, 1974 Using Next Generation Sequencing Technique, Monsicha Wangthongchaicharoen

Chulalongkorn University Theses and Dissertations (Chula ETD)

Kitti's hog-nosed bat Craseonycteris thonglongyai, Hill 1974 was a vulnerable species in IUCN Red List of Threatened Species in 2008. However, this species was reassessed to be near threatened species due to roosting caves discovery resulted in the increased total population size. Despite that, disturbance on its roosting and foraging sites from human activities are still occurred. Previous studies proposed that Kitti’s hog-nosed bats forage using familiar flight path within short distance from roosting cave. The foraging bouts were also short. Thus, there is a limitation on food availability in this bat species. Moreover, bats in different sexes and reproductive …

Distribution And Diversity Of Heliothine And Other Lepidopteran Nudiviruses, Emrah Ozel

Theses and Dissertations--Entomology

Helicoverpa zea nudivirus 2 (HzNV-2) is the only known sterilizing and sexually-transmitted insect virus and causes pathological symptoms in H. zea reproductive tissues. HzNV-2 has features that make it a candidate as a H. zea (corn earworm) control agent, such as the ability to cause asymptomatic (latent) and symptomatic (lytic) infections and the ability to influence mating behavior of its host to favor virus spread. HzNV pathology has been studied and its genome sequenced, however, its prevalence in natural populations is largely unknown. In this study, we developed and used a low-cost PCR-based molecular survey to investigate HzNV-2 prevalence and …

Black Grouper (Mycteroperca Bonaci) Neurocranium, Celeste Jaworski, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Neurocranium from 7.5 cm total length. Black Grouper (Mycteroperca bonaci), collected from Denny's Seafood Market on 15/10/2021 by Celeste Jaworski.

Gafftopsail Catfish Neurocranium, Allison J. Soucier

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Gafftopsail Catfish (Bagre marinus), neurocranium length: 11.5 cm, collected from Keewaydin Island in Marco Florida on 15/9/2021 by Allison Soucier.

Exploring The Dynamics Of Small Pelagic Fish Catches In The Marmara Sea In Relation Tochanging Environmental And Bio-Optical Parameters, Eki̇n Akoğlu

Turkish Journal of Zoology

The Marmara Sea has a large drainage basin that includes cities with heavy industrialisation and agricultural land use. Therefore, it is under the influence of significant anthropogenic activities that adversely affect the well-being of its ecosystem. The Marmara Sea is also an important fishing ground with many commercially important fish species. These fish species are also under the influence of the adverse impacts of anthropogenic activities. Fisheries catches in the Marmara Sea had experienced severe fluctuations since the onset of the 2000s. In this study, possible underlying reasons for these fluctuations were investigated between 2000 and 2019 using remotelysensed environmental …

Determination Of Oxidative, Genotoxic, And Histopathologic Effects Of Metal Pollution Onthe Fish Fauna Inhabiting Karasu River, Turkey, Hati̇ce Dane, Turgay Şi̇şman

Turkish Journal of Zoology

The water quality of rivers located in areas close to major cities is deteriorating significantly due to increased pollution. The Karasu River, which passes through Erzurum city Turkey, is getting polluted day by day due to domestic and industrial wastewater. In the study, various assessments were made in three different fish species to determine the impact of possible contamination here. Capoeta capoeta, Alburnus mossulensis and Squalius cephalus were caught from four stations of the river. Micronucleus test was applied to find out genotoxic alterations, and plasma total oxidant status (TOS) and total antioxidant status (TAS) were measured to determine oxidative …

Kinorhynchs From Sandy Coastal Habitats In Turkey, With The Description Of A New Pan-Mediterranean Species Of Echinoderes (Cyclorhagida: Echinoderidae), Martin Vinther Sørensen, Maria Herranz, Fernando Pardos, Furkan Durucan

Turkish Journal of Zoology

Kinorhynchs from eight sandy, shallow water localities along the west and south coasts of Turkey were examined. The study resulted in the finding of six different species: Two species, Echinoderes gerardi and Cephalorhyncha flosculosa were known from Turkey, two species, Echinoderes riedli and Campyloderes vanhoeffeni were known from the Mediterranean, but are new to Turkey, and two species, Echinoderes sp. and E. shahmaranae sp. nov. are new to science. Echinoderes sp. resembles E. charlotteae from the Gulf of Mexico, but differs at some minor points. However, since only a single specimen was available, only diagnostic details, but no formal description, …

Infestation And Effect Of Parasitic Isopod Epipenaeon Ingens Ingens Nobili, 1906 Oncommercial Shrimp Species In The Eastern Mediterranean: A Case Study Of The Populationof Brown Shrimp Penaeus Aztecus Ives, 1891, Mehmet Cengi̇z Deval, Fatma Gonca Koçanci

Turkish Journal of Zoology

Monthly samples of seven species of penaeid shrimps, namely, Penaeus aztecus (Ives, 1891), Penaus hathor (Burkenroad, 1959) Penaus japonicus (Spence Bate,1888), Penaus kerathurus (Forskal,1775), Penaus semisulcatus (De Haan,1844), Metapenaeus monoceros (Fabricus, 1798) and Metapenaeopsis aegyptia (Galil & Golani, 1990) were collected from Antalya Bay in the Eastern Mediterranean Sea from March, 2019 through March, 2020. Except for P. aztecus and P. semisulcatus, no other shrimp species were infected with the parasitic isopod Epipenaeon ingens ingens. Of the 3043 P. aztecus shrimp inspected, 541 individuals were infected (17.8%) with the bopyrid parasite E. ingens ingens. However, the annual infestation rate in …

Distal Excurrent Ducts And Penile Morphology Of The Urogenital System In The Mississippi Mud Turtle, Kinosternon Subrubrum Hippocrepis (Chelonia:Kinosternidae), Stanley E. Trauth, Michael V. Plummer

Journal of the Arkansas Academy of Science

We examined the distal excurrent ductal morphology and penile anatomy of the urogenital system in the Mississippi Mud Turtle, Kinosternon subrubrum hippocrepis, from a small sample of individuals collected in Arkansas in order to provide additional information regarding turtle urogenital anatomy. Specifically, we focused on the basic anatomy and histology of distal excurrent ducts (ductus deferens and ureter), associated structures (urogenital papillae), and penile histology in this kinosternid turtle. In addition, we provide an overview of the gross urogenital anatomy in this turtle, given that little detailed information exists on this topic in the chelonian literature.

Use Of Redwood Basal Hollows By Bats: A Focus On The Townsend's Big-Eared Bat On The North Coast Of California, Amon Jotesh Armstrong

Cal Poly Humboldt theses and projects

Loss of roosting resources, either through disturbance or removal, negatively affects bats. For sensitive species, such as the Townsend’s big-eared bat (Corynorhinus townsendii), determining roost requirements is a critical component in conserving their habitat. Such cavity roosting bats on the North Coast of California may use hollows in large redwood trees. In this study, I examined the factors determining the use of basal tree hollows by different bat species at eight redwood forest sites in Del Norte, Humboldt, and Mendocino Counties, California. Bat guano was collected from 179 basal hollow roosts from 2017 to 2018, and guano mass …

Embracing Dynamic Models For Gene Drive Management, Andrew J. Golnar, Emily W. Ruell, Alun L. Lloyd, Kim M. Pepin

United States Department of Agriculture Wildlife Services: Staff Publications

Robust methods of predicting how gene drive systems will interact with ecosystems is essential for safe deployment of gene drive technology. We describe how quantitative tools can reduce risk uncertainty, streamline empirical research, guide risk management, and promote cross-sector collaboration throughout the process of gene drive technology development and implementation.

Gene drive technologies, although diverse in design and mode of action, are molecular architectures that promote the transmission of genetic information between generations. In theory, the release of one gene-drive-modified organism (GDMO) has the potential to irreversibly alter species, ecosystems, and environmental processes at a global scale (although in practice …

Economic Effects Of Predation By Scaup On Baitfish And Sportfish Farms, Carole R. Engle, Stephen Clements, Brian S. Dorr, J. Brian Davis, Luke A. Roy, Anita M. Kelly

United States Department of Agriculture Wildlife Services: Staff Publications

Fish-eating birds have been found to consume baitfish and sportfish raised on farms in the United States. Understanding the on-farm economic effects of such wildlife conflicts is essential for wildlife management agencies to make informed decisions. Lesser scaup, while not widely considered a fisheating bird, will consume farmed fish. Baitfish and sportfish farms in Arkansas (the major baitfish and sportfish producingstate in the U.S.) were surveyed to gather data on the cost of protecting farm crops from scaup. The values of lost sales revenue from the various species of baitfish and sportfish consumed by scaup were estimated based on a …

Evidence On The Effectiveness Of Small Unmanned Aircraft Systems (Suas) As A Survey Tool For North American Terrestrial, Vertebrate Animals: A Systematic Map Protocol, Jared A. Elmore, Michael F. Curran, Kristine O. Evans, Sathishkumar Samiappan, Meilun Zhou, Morgan B. Pfeiffer, Bradley F. Blackwell, Raymond B. Iglay

United States Department of Agriculture Wildlife Services: Staff Publications

Background: Small unmanned aircraft systems (sUAS) are replacing or supplementing manned aircraft and groundbased surveys in many animal monitoring situations due to better coverage at finer spatial and temporal resolutions, access, cost, bias, impacts, safety, efficiency, and logistical benefits. Various sUAS models and sensors are available with varying features and usefulness depending on survey goals. However, justification for selection of sUAS and sensors are not typically offered in published literature and existing reviews do not adequately cover past and current sUAS applications for animal monitoring nor their associated sUAS model and sensor technologies, taxonomic and geographic scope, flight conditions and …

Rabies Post-Exposure Healthcare-Seeking Behaviors And Perceptions: Results From A Knowledge, Attitudes, And Practices Survey, Uganda, 2013, Sarah C. Bonaparte, Laura Adams, Barnabas Bakamutumaho, Galileu Barbosa Costa, Julie M. Cleaton, Amy Gilbert, Modupe Osinubi, Emily G. Pieracci, Sergio Recuenco, Victor Tugumizemu, Joseph Wamala, Ryan M. Wallace

United States Department of Agriculture Wildlife Services: Staff Publications

Background Rabies is a viral disease of animals and people causing fatal encephalomyelitis if left untreated. Although effective pre- and post-exposure vaccines exist, they are not widely available in many endemic countries within Africa. Since many individuals in these countries remain at risk of infection, post-exposure healthcare-seeking behaviors are crucial in preventing infection and warrant examination.

Methodology A rabies knowledge, attitudes, and practices survey was conducted at 24 geographically diverse sites in Uganda during 2013 to capture information on knowledge concerning the disease, response to potential exposure events, and vaccination practices. Characteristics of the surveyed population and of the canine-bite …

Differing Alterations Of Odor Volatiles Among Pathogenic Stimuli, Patrick Millet, Talia Martin, Maryanne Opiekun, Gary K. Beauchamp, Bruce A. Kimball

United States Department of Agriculture Wildlife Services: Staff Publications

Alterations of the volatile metabolome (the collection of volatiles present in secretions and other emanations) that occur in response to inflammation can be detected by conspecifics and chemometric analyses. Using a model system where mouse urinary metabolites are altered by treatment with lipopolysaccharide (found in the outer cell membrane of gram-negative bacteria), we hypothesized that alteration of body odor volatiles will vary according to the pathogen responsible for inducing the inflammation. We tested this hypothesis by treating mice with different immunogens that engage different immune signaling pathways. Results suggest that alterations of body odor volatiles resulting from inflammation do contain …

Using Object-Based Image Analysis To Detect Laughing Gull Nests, Benjamin F. Martini, Douglas A. Miller

United States Department of Agriculture Wildlife Services: Staff Publications

Remote sensing has long been used to study wildlife; however, manual methods of detecting wildlife in aerial imagery are often time-consuming and prone to human error, and newer computer vision techniques have not yet been extensively applied to wildlife surveys. We used the object-based image analysis (OBIA) software eCognition to detect laughing gull (Leucophaeus atricilla) nests in Jamaica Bay as part of an ongoing monitoring effort at the John F. Kennedy International Airport. Our technique uses a combination of high resolution 4-band aerial imagery captured via manned aircraft with a multispectral UltraCam Falcon M2 camera, LiDAR point cloud data, and …

A Comparative Perspective On Three Primate Species’ Responses To A Pictorial Emotional Stroop Task, Lydia M. Hopper, Matthias Allritz, Crystal L. Egelkamp, Sarah M. Huskisson, Sarah L. Jacobson, Jesse G. Leinwand, Stephen R. Ross

Publications and Research

The Stroop effect describes interference in cognitive processing due to competing cognitive demands. Presenting emotionally laden stimuli creates similar Stroop-like effects that result from participants’ attention being drawn to distractor stimuli. Here, we adapted the methods of a pictorial Stroop study for use with chimpanzees (N = 6), gorillas (N = 7), and Japanese macaques (N = 6). We tested all subjects via touchscreens following the same protocol. Ten of the 19 subjects passed pre-test training. Subjects who reached criterion were then tested on a standard color-interference Stroop test, which revealed differential accuracy in the primates’ responses across conditions. Next, …

The Tijeras Pueblo (La 581) Archaeofaunal Project, Emily Lena Jones, Scott Kirk, Caitlin S. Ainsworth, Asia Alsgaard, Jana Valesca Meyer, Cyler Conrad

Anthropology Datasets

These files contain data generated by the Tijeras Pueblo (LA 581) Archaeofaunal Project, a project of the University of New Mexico Department of Anthropology Zooarchaeology Laboratory between 2011 and the present. This project has been supported in part by the National Science Foundation under Grant No. 1732622 and by a grant from the Research Allocations Committee of the University of New Mexico.

These data are the basis of the analyses presented in the following publication:

Jones, Emily Lena, Scott Kirk, Caitlin S. Ainsworth, Asia Alsgaard, Jana Valesca Meyer, and Cyler Conrad. 2021. The Community at the Crossroads: Artiodactyl Exploitation and …

A Sea Turtle Population Assessment For Florida's Big Bend, Northeastern Gulf Of Mexico, Ryan M. Chabot, Ryan C. Welsh, Cody R. Mott, Jeffrey R. Guertin, Brian M. Shamblin, Blair E. Witherington

Gulf and Caribbean Research

Coastal waters of Florida’s Big Bend, Gulf of Mexico (GOM) once supported one of the largest sea turtle fisheries in the United States. To fill an information gap in this region on abundance and distribution of sea turtles, we used vessel—based distance sampling and active capture methods to characterize current foraging aggregations near the St. Martins Marsh Aquatic Preserve. Over 10 sampling periods between 2012—2018, we completed 513 km of transects and recorded 819 turtles among 4 species—green turtle (Chelonia mydas, n = 624), Kemp’s ridley (Lepidochelys kempii, n = 147), loggerhead (Caretta caretta, …

Scaling The Effects Of Ocean Acidification On Coral Growth And Coral-Coral Competition On Coral Community Recovery, Nicolas R. Evensen, Yves-Marie Bozec, Peter J. Edmunds, Peter J. Mumby

Biological Sciences Faculty Publications

Ocean acidification (OA) is negatively affecting calcification in a wide variety of marine organisms. These effects are acute for many tropical scleractinian corals under short-term experimental conditions, but it is unclear how these effects interact with ecological processes, such as competition for space, to impact coral communities over multiple years. This study sought to test the use of individual-based models (IBMs) as a tool to scale up the effects of OA recorded in short-term studies to community-scale impacts, combining data from field surveys and mesocosm experiments to parameterize an IBM of coral community recovery on the fore reef of Moorea, …

Global Extinction Risk For Seahorses, Pipefishes And Their Near Relatives (Syngnathiformes), Riley A. Pollom, Gina M. Ralph, Caroline M. Pollock, Amanda C.J. Vincent

Biological Sciences Faculty Publications

Few marine taxa have been comprehensively assessed for their conservation status, despite heavy pressures from fishing, habitat degradation and climate change. Here we report on the first global assessment of extinction risk for 300 species of syngnathiform fishes known as of 2017, using the IUCN Red List criteria. This order of bony teleosts is dominated by seahorses, pipefishes and seadragons (family Syngnathidae). It also includes trumpetfishes (Aulostomidae), shrimpfishes (Centriscidae), cornetfishes (Fistulariidae) and ghost pipefishes (Solenostomidae). At least 6% are threatened, but data suggest a mid-point estimate of 7.9% and an upper bound of 38%. Most of the threatened species are …

Spatiotemporal Interactions Between Deer And Cattle, Sydney Brewer

Honors Program: Senior Projects (Public)

Mule deer, white-tailed deer, and cattle are sympatric on the landscape throughout many portions of Nebraska and encounter each other in time and space. By considering variation in daily activity patterns and non-random patterns in the timing of passage through specific locations, we can better understand whether animals may be avoiding each other temporally when sharing space. I investigated temporal activity patterns and avoidance/attraction ratios to investigate if deer altered their activity patterns in the presence of cattle and if they exhibited avoidance at a study site near McCook, Nebraska, USA. We collected data from 19 game cameras that were …

Contributions To The Turkish Oribatid Mite Fauna (Acari: Oribatida) From Sakarya Andyozgat Provinces, Sedat Per, Kübra Çubukçu, Ayşe Toluk, Nusret Ayyildiz

Turkish Journal of Zoology

This study deals with the data on Turkish records of oribatid mites that play an important role in decomposition of organic matter, nutrient cycling, and soil formation. Oribatid mites in litter, lichen, moss, and soil collected from Sakarya and Yozgat provinces were sampled between 2014 and 2020. Standard methods were used for extraction, detection, preservation, and preparation of mites from the material collected from study area. Five oribatid mites were for the first time recorded from Turkey, namely Mesotritia (Mesotritia) nuda (Berlese, 1887) (Oribotritiidae), Hoplophorella (Rhacaplacarus) ortizi (Pérez-Íñigo, 1970) (Phthiracaridae), Eremaeus translamellatus Hammer, 1952 (Eremaeidae), Oribatella (Oribatella) foliata Krivolutsky, 1974 …

Ant Fauna (Hymenoptera: Formicidae) Of Central Anatolian Region Of Turkey, Kadri̇ Kiran, Celal Karaman

Turkish Journal of Zoology

The Central Anatolian part of Turkey was investigated with the aim of determining its Formicidae fauna. Specimens were collected by hand sampling and pitfall traps in 24 habitats in 383 different localities in Central Anatolia Region during 2001-2016. As a result, 137 species belonging to 34 genera were determined. Messor incorruptus Kuznetsov-Ugamsky, 1929 and Ponera testacea Emery, 1895 are new records for Turkish ant fauna. We excluded four species, Camponotus sylvaticus (Oliver, 1792), Messor meridionalis (André, 1883), Proformica striaticeps (Forel, 1911) and Tapinoma nigerrimum (Nylander, 1856), from Turkish ant fauna due to recent taxonomic data and distribution pattern. With these …

Insectum Non Grata: The Harlequin Ladybird, Harmonia Axyridis (Pallas, 1773)(Coleoptera, Coccinellidae) In Turkey, Ahmet Karataş, Ayşegül Karataş, Ni̇zametti̇n Yavuz, Eli̇f Deni̇z Ülker, Özgür Koçak, Burak Akbaba

Turkish Journal of Zoology

The Harlequin Ladybird, Harmonia axyridis (Pallas, 1773), is native to Eastern Asia but it has been introduced to many countries in Africa, America, and Eurasia. In Turkey, H. axyridis is one of the most fast-spreading invasive alien species. Since the collection of the first specimens in 2010, H. axyridis spread almost all over the country. The species spreads fast in Turkey according to the new records, obtained originally from the field studies and the citizen science data. It was recorded for the first time from 19 of 81 Turkish provinces (Ankara, Antalya, Balıkesir, Bolu, Bursa, İstanbul, İzmir, Karaman, Kastamonu, Kırklareli, …

Capoeta Kosswigi Karaman, 1969 A Junior Synonym Of Capoeta Damascina(Valenciennes, 1842) (Teleostei: Cyprinidae), Erdoğan Çi̇çek, Soheil Eagderi, Burak Seçer, Sevi̇l Sungur

Turkish Journal of Zoology

Capoeta kosswigi was described from Lake Van basin, Turkey, being close to C. damascina and C. umbla. It is distinguished from them by a pointed snout and a small horseshoe-shaped mouth, and differing from C. damascina by having smaller scales, and from the C. umbla by processing larger scales. In this study, we tested the suggested synonymy hypothesis of C. kosswigi and C. damascina by comparing the morphometric and meristic data. The results revealed that all morphometric and meristic characters of C. kosswigi overlap with those of C. damascina. In line with previous molecular studies that COI, cytb and 16S …

Common Raven Nesting And Spatial Distancing On Power Lines In Southeast Idaho, Usa, Quinn R. Shurtliff, Jericho C. Whiting

Human–Wildlife Interactions

Common raven (Corvus corax; raven) abundance and distribution have increased in western North America in recent decades, facilitated by anthropogenic subsidies and other environmental changes. Electrical power transmission line structures provide nesting substrates for ravens. When these structures transect landscapes where natural nest substrates are limited, they may facilitate raven predation on eggs and juveniles of sensitive avian and reptile species. Little information is available regarding raven nest density trends on adjacent power lines or how raven territorial behavior influences spatial partitioning of nests, and hence, nest density. This knowledge would be valuable for managers of sensitive prey …

Multi-Level Movement Response Of Invasive Wild Pigs (Sus Scrofa) To Removal, Guillaume Bastille-Rousseau, Peter E. Schlichting, David A. Keiter, Joshua B. Smith, John C. Kilgo, George Wittemyer, Kurt C. Vercauteren, James C. Beasley, Kim M. Pepin

United States Department of Agriculture Wildlife Services: Staff Publications

BACKGROUND: Lethal removal of invasive species, such as wild pigs (Sus scrofa), is often the most efficient approach for reducing their negative impacts. Wild pigs are one of the most widespread and destructive invasive mammals in the USA. Lethal management techniques are a key approach for wild pigs and can alter wild pig spatial behavior, but it is unclear how wild pigs respond to the most common removal technique, trapping.We investigated the spatial behavior of wild pigs following intensive removal of conspecifics via trapping at three sites within the Savannah River Site, SC, USA. We evaluated changes in …

Evaluating The Effects Of Mountain Beaver (Aplodontia Rufa) Management On Conifer Stocking In Western Oregon, Jimmy D. Taylor, Vanessa M. Petro

United States Department of Agriculture Wildlife Services: Staff Publications

Mountain beaver (Aplodontia rufa) is the most primitive rodent species in North America and is endemic to the Pacific Northwest, USA. Within their range, mountain beaver cause more conflict with conifer forest regeneration than any other vertebrate species. Most damage occurs as a result of clipping and browsing new seedlings, which reduces stocking density and delays stand development. An integrated approach using trapping and a registered toxicant (baiting) has been suggested as the most efficacious means to reduce seedling loss during stand initiation. We evaluated this management strategy in intensively managed conifer stands across two mountain ranges in …